ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49j06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001058561.1| Oryza sativa (japonica cultivar-group) Os04g... 84 1e-12
2emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 84 1e-12
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-12
4emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 84 1e-12
5dbj|AK062396.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-12
6ref|NM_001058559.1| Oryza sativa (japonica cultivar-group) Os04g... 58 7e-05
7dbj|AK061191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 7e-05
8emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 44 1.0
9gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complet... 44 1.0
10emb|CT829082.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 4.1
11emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 4.1
12ref|NM_001060667.1| Oryza sativa (japonica cultivar-group) Os04g... 42 4.1
13emb|AM167904.1| Bordetella avium 197N complete genome 42 4.1
14gb|AE014298.4| Drosophila melanogaster chromosome X, complete se... 42 4.1
15gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 42 4.1
16gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosom... 42 4.1
17gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosom... 42 4.1
18gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, c... 42 4.1
19gb|AC104286.11| Drosophila melanogaster X BAC RP98-13J2 (Roswell... 42 4.1
20ref|NM_001014706.1| Drosophila melanogaster CG13376-RA (CG13376)... 42 4.1
21dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 4.1
22gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 42 4.1
23gb|AC135464.13| Medicago truncatula clone mth2-17k21, complete s... 42 4.1
24gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 42 4.1
25tpg|BK002951.1| TPA_inf: Drosophila melanogaster HDC16773 (HDC16... 42 4.1
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
27emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in ... 42 4.1
28gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 4.1
29emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 42 4.1
30emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 42 4.1
31emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,... 42 4.1
32emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4,... 42 4.1
33emb|AL050231.2|DMBR37P7 Drosophila melanogaster BAC clone BACR37P7 42 4.1
34emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like a... 42 4.1
35emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in... 42 4.1
36emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in... 42 4.1
37dbj|AK063095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.1
38emb|AL606481.8| Zebrafish DNA sequence from clone BUSM1-99M4 Con... 42 4.1
39gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 4.1
40emb|AL603743.8| Zebrafish DNA sequence from clone RP71-98D8 Cont... 42 4.1
41emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 4.1
42gb|AC104805.3| Homo sapiens BAC clone RP11-571N1 from 4, complet... 42 4.1

>ref|NM_001058561.1| Oryza sativa (japonica cultivar-group) Os04g0110100 (Os04g0110100)
           mRNA, complete cds
          Length = 1092
 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561
           |||||||||| || |||||| ||| |||||| |||||||||||| ||| ||||    |||
Sbjct: 462 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 521

                                                                       
Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621
           ||| ||  |||||||||||||||||||| ||||||| ||| ||||  |||||||  || |
Sbjct: 522 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 581

                                                                       
Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681
           | || | |||||| || ||||| ||||||| | ||||| ||||   ||| ||||||||||
Sbjct: 582 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 641

             
Query: 682 cg 683
           ||
Sbjct: 642 cg 643



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 416 ttcgtcgtcctcctcgacaggt 437
           ||||||||||||||||||||||
Sbjct: 370 ttcgtcgtcctcctcgacaggt 391



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>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete
             sequence
          Length = 121821

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                         
Query: 502   caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561
             |||||||||| || |||||| ||| |||||| |||||||||||| ||| ||||    |||
Sbjct: 59729 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 59670

                                                                         
Query: 562   gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621
             ||| ||  |||||||||||||||||||| ||||||| ||| ||||  |||||||  || |
Sbjct: 59669 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 59610

                                                                         
Query: 622   ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681
             | || | |||||| || ||||| ||||||| | ||||| ||||   ||| ||||||||||
Sbjct: 59609 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 59550

               
Query: 682   cg 683
             ||
Sbjct: 59549 cg 59548



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 627   ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683
             |||||||| ||||||||| |||||| | ||||| |||| | ||||||||||||||||
Sbjct: 35488 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 35432



 Score = 48.1 bits (24), Expect = 0.067
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 416   ttcgtcgtcctcctcgacaggttcccgacgct 447
             |||||||||||||||||||| |||||| ||||
Sbjct: 35705 ttcgtcgtcctcctcgacagcttcccgccgct 35674



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 798   tcctcggtgtccgtgattgggacctcacggtggacagg 835
             |||||||  ||||||| ||| |||||||||||||||||
Sbjct: 35317 tcctcggcatccgtgactggaacctcacggtggacagg 35280



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 416   ttcgtcgtcctcctcgacaggt 437
             ||||||||||||||||||||||
Sbjct: 59821 ttcgtcgtcctcctcgacaggt 59800



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                          
Query: 502    caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561
              |||||||||| || |||||| ||| |||||| |||||||||||| ||| ||||    |||
Sbjct: 584534 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 584475

                                                                          
Query: 562    gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621
              ||| ||  |||||||||||||||||||| ||||||| ||| ||||  |||||||  || |
Sbjct: 584474 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 584415

                                                                          
Query: 622    ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681
              | || | |||||| || ||||| ||||||| | ||||| ||||   ||| ||||||||||
Sbjct: 584414 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 584355

                
Query: 682    cg 683
              ||
Sbjct: 584354 cg 584353



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 627    ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683
              |||||||| ||||||||| |||||| | ||||| |||| | ||||||||||||||||
Sbjct: 560120 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 560064



 Score = 48.1 bits (24), Expect = 0.067
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 416    ttcgtcgtcctcctcgacaggttcccgacgct 447
              |||||||||||||||||||| |||||| ||||
Sbjct: 560337 ttcgtcgtcctcctcgacagcttcccgccgct 560306



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 798    tcctcggtgtccgtgattgggacctcacggtggacagg 835
              |||||||  ||||||| ||| |||||||||||||||||
Sbjct: 559949 tcctcggcatccgtgactggaacctcacggtggacagg 559912



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 416    ttcgtcgtcctcctcgacaggt 437
              ||||||||||||||||||||||
Sbjct: 584626 ttcgtcgtcctcctcgacaggt 584605



 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 82       acccaaagaaaccataggctg 102
                |||||||||||||||||||||
Sbjct: 33657545 acccaaagaaaccataggctg 33657565



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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
              complete sequence
          Length = 143730

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                          
Query: 502    caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561
              |||||||||| || |||||| ||| |||||| |||||||||||| ||| ||||    |||
Sbjct: 115501 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 115442

                                                                          
Query: 562    gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621
              ||| ||  |||||||||||||||||||| ||||||| ||| ||||  |||||||  || |
Sbjct: 115441 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 115382

                                                                          
Query: 622    ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681
              | || | |||||| || ||||| ||||||| | ||||| ||||   ||| ||||||||||
Sbjct: 115381 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 115322

                
Query: 682    cg 683
              ||
Sbjct: 115321 cg 115320



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 627   ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683
             |||||||| ||||||||| |||||| | ||||| |||| | ||||||||||||||||
Sbjct: 91087 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 91031



 Score = 48.1 bits (24), Expect = 0.067
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 416   ttcgtcgtcctcctcgacaggttcccgacgct 447
             |||||||||||||||||||| |||||| ||||
Sbjct: 91304 ttcgtcgtcctcctcgacagcttcccgccgct 91273



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 798   tcctcggtgtccgtgattgggacctcacggtggacagg 835
             |||||||  ||||||| ||| |||||||||||||||||
Sbjct: 90916 tcctcggcatccgtgactggaacctcacggtggacagg 90879



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 416    ttcgtcgtcctcctcgacaggt 437
              ||||||||||||||||||||||
Sbjct: 115593 ttcgtcgtcctcctcgacaggt 115572



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>dbj|AK062396.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D08, full
           insert sequence
          Length = 1092

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561
           |||||||||| || |||||| ||| |||||| |||||||||||| ||| ||||    |||
Sbjct: 462 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 521

                                                                       
Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621
           ||| ||  |||||||||||||||||||| ||||||| ||| ||||  |||||||  || |
Sbjct: 522 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 581

                                                                       
Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681
           | || | |||||| || ||||| ||||||| | ||||| ||||   ||| ||||||||||
Sbjct: 582 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 641

             
Query: 682 cg 683
           ||
Sbjct: 642 cg 643



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 416 ttcgtcgtcctcctcgacaggt 437
           ||||||||||||||||||||||
Sbjct: 370 ttcgtcgtcctcctcgacaggt 391



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>ref|NM_001058559.1| Oryza sativa (japonica cultivar-group) Os04g0109500 (Os04g0109500)
           mRNA, complete cds
          Length = 1337

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683
           |||||||| ||||||||| |||||| | ||||| |||| | ||||||||||||||||
Sbjct: 608 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 664



 Score = 48.1 bits (24), Expect = 0.067
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447
           |||||||||||||||||||| |||||| ||||
Sbjct: 391 ttcgtcgtcctcctcgacagcttcccgccgct 422



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835
           |||||||  ||||||| ||| |||||||||||||||||
Sbjct: 779 tcctcggcatccgtgactggaacctcacggtggacagg 816



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>dbj|AK061191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F07, full
           insert sequence
          Length = 1346

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683
           |||||||| ||||||||| |||||| | ||||| |||| | ||||||||||||||||
Sbjct: 608 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 664



 Score = 48.1 bits (24), Expect = 0.067
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447
           |||||||||||||||||||| |||||| ||||
Sbjct: 391 ttcgtcgtcctcctcgacagcttcccgccgct 422



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835
           |||||||  ||||||| ||| |||||||||||||||||
Sbjct: 779 tcctcggcatccgtgactggaacctcacggtggacagg 816



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>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2
          Length = 2912490

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 148     catggtggcgccggcggccgcg 169
               ||||||||||||||||||||||
Sbjct: 1863820 catggtggcgccggcggccgcg 1863841



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>gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complete sequence
          Length = 154706

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 18    cacacacaaatacacaacagacatac 43
             ||||||||||||||||||| ||||||
Sbjct: 97721 cacacacaaatacacaacacacatac 97746



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>emb|CT829082.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022B10, full
           insert sequence
          Length = 768

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acccaaagaaaccataggctg 102
           |||||||||||||||||||||
Sbjct: 625 acccaaagaaaccataggctg 645



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>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone:
             OSIGBa0132E09-OSIGBa0108L24, complete sequence
          Length = 130140

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acccaaagaaaccataggctg 102
             |||||||||||||||||||||
Sbjct: 57382 acccaaagaaaccataggctg 57402



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>ref|NM_001060667.1| Oryza sativa (japonica cultivar-group) Os04g0659000 (Os04g0659000)
           mRNA, complete cds
          Length = 597

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acccaaagaaaccataggctg 102
           |||||||||||||||||||||
Sbjct: 429 acccaaagaaaccataggctg 449



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>emb|AM167904.1| Bordetella avium 197N complete genome
          Length = 3732255

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 900     ccgtggccgccaccgccgcca 920
               |||||||||||||||||||||
Sbjct: 1111005 ccgtggccgccaccgccgcca 1110985



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>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 899    tccgtggccgccaccgccgcc 919
              |||||||||||||||||||||
Sbjct: 160323 tccgtggccgccaccgccgcc 160343



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>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 900   ccgtggccgccaccgccgcca 920
             |||||||||||||||||||||
Sbjct: 45596 ccgtggccgccaccgccgcca 45576



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>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0003P07, complete sequence
          Length = 175116

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 905   gccgccaccgccgccatcgta 925
             |||||||||||||||||||||
Sbjct: 77513 gccgccaccgccgccatcgta 77493



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>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence
          Length = 209416

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 8      ataccccaatcacacacaaatacacaacagaca 40
              |||||||||||||||||| | ||| ||||||||
Sbjct: 167464 ataccccaatcacacacagacacagaacagaca 167432



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>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence
          Length = 186496

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 8     ataccccaatcacacacaaatacacaacagaca 40
             |||||||||||||||||| | ||| ||||||||
Sbjct: 41281 ataccccaatcacacacagacacagaacagaca 41249



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>gb|AC104286.11| Drosophila melanogaster X BAC RP98-13J2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 176393

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 899   tccgtggccgccaccgccgcc 919
             |||||||||||||||||||||
Sbjct: 30801 tccgtggccgccaccgccgcc 30821



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>ref|NM_001014706.1| Drosophila melanogaster CG13376-RA (CG13376), mRNA
          Length = 582

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 899 tccgtggccgccaccgccgcc 919
           |||||||||||||||||||||
Sbjct: 537 tccgtggccgccaccgccgcc 517



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    ctggcgcgccggcgccggcgg 348
              |||||||||||||||||||||
Sbjct: 823080 ctggcgcgccggcgccggcgg 823100



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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 498    tgcccaacgccacggacggcc 518
              |||||||||||||||||||||
Sbjct: 347236 tgcccaacgccacggacggcc 347256



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>gb|AC135464.13| Medicago truncatula clone mth2-17k21, complete sequence
          Length = 105376

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     gaataccccaatcacacacaaatac 30
             |||||||||||||| ||||||||||
Sbjct: 96916 gaataccccaatcaaacacaaatac 96892



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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acccaaagaaaccataggctg 102
             |||||||||||||||||||||
Sbjct: 88705 acccaaagaaaccataggctg 88725



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>tpg|BK002951.1| TPA_inf: Drosophila melanogaster HDC16773 (HDC16773) gene, complete
           cds
          Length = 3089

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 899 tccgtggccgccaccgccgcc 919
           |||||||||||||||||||||
Sbjct: 46  tccgtggccgccaccgccgcc 66



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 905     gccgccaccgccgccatcgta 925
               |||||||||||||||||||||
Sbjct: 6359660 gccgccaccgccgccatcgta 6359640



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>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5,
             complete sequence
          Length = 162086

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    cacacacaaatacacaacagacata 42
             ||||||||||||||||||| |||||
Sbjct: 86219 cacacacaaatacacaacacacata 86195



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 893     ctcgggtccgtggccgccaccgccgccat 921
               ||||||| |||||| ||||||||||||||
Sbjct: 2026631 ctcgggttcgtggcggccaccgccgccat 2026603



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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    tcatggtggcgccggcggccg 167
              |||||||||||||||||||||
Sbjct: 149446 tcatggtggcgccggcggccg 149466



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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    tcatggtggcgccggcggccg 167
              |||||||||||||||||||||
Sbjct: 305230 tcatggtggcgccggcggccg 305250



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>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acccaaagaaaccataggctg 102
             |||||||||||||||||||||
Sbjct: 88605 acccaaagaaaccataggctg 88625



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>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
            complete sequence
          Length = 153623

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   acccaaagaaaccataggctg 102
            |||||||||||||||||||||
Sbjct: 7988 acccaaagaaaccataggctg 8008



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>emb|AL050231.2|DMBR37P7 Drosophila melanogaster BAC clone BACR37P7
          Length = 102619

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 899   tccgtggccgccaccgccgcc 919
             |||||||||||||||||||||
Sbjct: 25553 tccgtggccgccaccgccgcc 25573



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>emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like and Gtl2 gene
          Length = 111805

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 8     ataccccaatcacacacaaatacacaacagaca 40
             |||||||||||||||||| | ||| ||||||||
Sbjct: 75625 ataccccaatcacacacagacacagaacagaca 75657



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>emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in linkage group 5,
             complete sequence
          Length = 134388

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    caatcacacacaaatacacaa 34
             |||||||||||||||||||||
Sbjct: 19770 caatcacacacaaatacacaa 19790



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>emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in linkage group 10,
             complete sequence
          Length = 199715

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    cacacaaatacacaacagaca 40
             |||||||||||||||||||||
Sbjct: 24200 cacacaaatacacaacagaca 24180



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>dbj|AK063095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-B06, full
           insert sequence
          Length = 597

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acccaaagaaaccataggctg 102
           |||||||||||||||||||||
Sbjct: 429 acccaaagaaaccataggctg 449



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>emb|AL606481.8| Zebrafish DNA sequence from clone BUSM1-99M4 Contains a novel gene
            for a protein with an immunoglobulin domain, complete
            sequence
          Length = 104752

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 20   cacacaaatacacaacagaca 40
            |||||||||||||||||||||
Sbjct: 6671 cacacaaatacacaacagaca 6691



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    ctggcgcgccggcgccggcgg 348
              |||||||||||||||||||||
Sbjct: 854777 ctggcgcgccggcgccggcgg 854797



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>emb|AL603743.8| Zebrafish DNA sequence from clone RP71-98D8 Contains the putative
            novel retrotransposon GYPSYDR2, the putative transposon
            TC1DR1 similar to C. elegans transposons and four CpG
            islands, complete sequence
          Length = 100214

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 20   cacacaaatacacaacagaca 40
            |||||||||||||||||||||
Sbjct: 7627 cacacaaatacacaacagaca 7607



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 762     ttgttggcttcttcgccaccc 782
               |||||||||||||||||||||
Sbjct: 3774472 ttgttggcttcttcgccaccc 3774492



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>gb|AC104805.3| Homo sapiens BAC clone RP11-571N1 from 4, complete sequence
          Length = 164347

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 989   tctatgcagacctgtcatgtg 1009
             |||||||||||||||||||||
Sbjct: 22042 tctatgcagacctgtcatgtg 22062


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 146,600,842
Number of extensions: 7867564
Number of successful extensions: 217367
Number of sequences better than 10.0: 42
Number of HSP's gapped: 217362
Number of HSP's successfully gapped: 66
Length of query: 1091
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1068
Effective length of database: 18,503,978,556
Effective search space: 19762249097808
Effective search space used: 19762249097808
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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