| Clone Name | FLbaf49j06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058561.1| Oryza sativa (japonica cultivar-group) Os04g0110100 (Os04g0110100) mRNA, complete cds Length = 1092 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/182 (80%) Strand = Plus / Plus Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561 |||||||||| || |||||| ||| |||||| |||||||||||| ||| |||| ||| Sbjct: 462 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 521 Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621 ||| || |||||||||||||||||||| ||||||| ||| |||| ||||||| || | Sbjct: 522 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 581 Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681 | || | |||||| || ||||| ||||||| | ||||| |||| ||| |||||||||| Sbjct: 582 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 641 Query: 682 cg 683 || Sbjct: 642 cg 643 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 ttcgtcgtcctcctcgacaggt 437 |||||||||||||||||||||| Sbjct: 370 ttcgtcgtcctcctcgacaggt 391
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/182 (80%) Strand = Plus / Minus Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561 |||||||||| || |||||| ||| |||||| |||||||||||| ||| |||| ||| Sbjct: 59729 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 59670 Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621 ||| || |||||||||||||||||||| ||||||| ||| |||| ||||||| || | Sbjct: 59669 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 59610 Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681 | || | |||||| || ||||| ||||||| | ||||| |||| ||| |||||||||| Sbjct: 59609 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 59550 Query: 682 cg 683 || Sbjct: 59549 cg 59548 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683 |||||||| ||||||||| |||||| | ||||| |||| | |||||||||||||||| Sbjct: 35488 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 35432 Score = 48.1 bits (24), Expect = 0.067 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447 |||||||||||||||||||| |||||| |||| Sbjct: 35705 ttcgtcgtcctcctcgacagcttcccgccgct 35674 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835 ||||||| ||||||| ||| ||||||||||||||||| Sbjct: 35317 tcctcggcatccgtgactggaacctcacggtggacagg 35280 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggt 437 |||||||||||||||||||||| Sbjct: 59821 ttcgtcgtcctcctcgacaggt 59800
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/182 (80%) Strand = Plus / Minus Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561 |||||||||| || |||||| ||| |||||| |||||||||||| ||| |||| ||| Sbjct: 584534 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 584475 Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621 ||| || |||||||||||||||||||| ||||||| ||| |||| ||||||| || | Sbjct: 584474 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 584415 Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681 | || | |||||| || ||||| ||||||| | ||||| |||| ||| |||||||||| Sbjct: 584414 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 584355 Query: 682 cg 683 || Sbjct: 584354 cg 584353 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683 |||||||| ||||||||| |||||| | ||||| |||| | |||||||||||||||| Sbjct: 560120 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 560064 Score = 48.1 bits (24), Expect = 0.067 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447 |||||||||||||||||||| |||||| |||| Sbjct: 560337 ttcgtcgtcctcctcgacagcttcccgccgct 560306 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835 ||||||| ||||||| ||| ||||||||||||||||| Sbjct: 559949 tcctcggcatccgtgactggaacctcacggtggacagg 559912 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggt 437 |||||||||||||||||||||| Sbjct: 584626 ttcgtcgtcctcctcgacaggt 584605 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 33657545 acccaaagaaaccataggctg 33657565
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/182 (80%) Strand = Plus / Minus Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561 |||||||||| || |||||| ||| |||||| |||||||||||| ||| |||| ||| Sbjct: 115501 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 115442 Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621 ||| || |||||||||||||||||||| ||||||| ||| |||| ||||||| || | Sbjct: 115441 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 115382 Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681 | || | |||||| || ||||| ||||||| | ||||| |||| ||| |||||||||| Sbjct: 115381 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 115322 Query: 682 cg 683 || Sbjct: 115321 cg 115320 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683 |||||||| ||||||||| |||||| | ||||| |||| | |||||||||||||||| Sbjct: 91087 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 91031 Score = 48.1 bits (24), Expect = 0.067 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447 |||||||||||||||||||| |||||| |||| Sbjct: 91304 ttcgtcgtcctcctcgacagcttcccgccgct 91273 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835 ||||||| ||||||| ||| ||||||||||||||||| Sbjct: 90916 tcctcggcatccgtgactggaacctcacggtggacagg 90879 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 416 ttcgtcgtcctcctcgacaggt 437 |||||||||||||||||||||| Sbjct: 115593 ttcgtcgtcctcctcgacaggt 115572
>dbj|AK062396.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D08, full insert sequence Length = 1092 Score = 83.8 bits (42), Expect = 1e-12 Identities = 147/182 (80%) Strand = Plus / Plus Query: 502 caacgccacggacggcctcgccgcggtcgagatcggcacggtgaggtcgtacgcgccaga 561 |||||||||| || |||||| ||| |||||| |||||||||||| ||| |||| ||| Sbjct: 462 caacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagaga 521 Query: 562 gtctccgaacgtcggcctcaacgtcaccatcacgcccaacggcaccgcggcgcctggccg 621 ||| || |||||||||||||||||||| ||||||| ||| |||| ||||||| || | Sbjct: 522 gtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcgg 581 Query: 622 ccgcgccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgc 681 | || | |||||| || ||||| ||||||| | ||||| |||| ||| |||||||||| Sbjct: 582 cagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgc 641 Query: 682 cg 683 || Sbjct: 642 cg 643 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 ttcgtcgtcctcctcgacaggt 437 |||||||||||||||||||||| Sbjct: 370 ttcgtcgtcctcctcgacaggt 391
>ref|NM_001058559.1| Oryza sativa (japonica cultivar-group) Os04g0109500 (Os04g0109500) mRNA, complete cds Length = 1337 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683 |||||||| ||||||||| |||||| | ||||| |||| | |||||||||||||||| Sbjct: 608 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 664 Score = 48.1 bits (24), Expect = 0.067 Identities = 30/32 (93%) Strand = Plus / Plus Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447 |||||||||||||||||||| |||||| |||| Sbjct: 391 ttcgtcgtcctcctcgacagcttcccgccgct 422 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835 ||||||| ||||||| ||| ||||||||||||||||| Sbjct: 779 tcctcggcatccgtgactggaacctcacggtggacagg 816
>dbj|AK061191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F07, full insert sequence Length = 1346 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 627 ccgtgtgggtcgagtacaacgccgttgcgcacctcctgcgcgtgtacgtcgccgccg 683 |||||||| ||||||||| |||||| | ||||| |||| | |||||||||||||||| Sbjct: 608 ccgtgtggatcgagtacagcgccgtcgagcaccacctgtgggtgtacgtcgccgccg 664 Score = 48.1 bits (24), Expect = 0.067 Identities = 30/32 (93%) Strand = Plus / Plus Query: 416 ttcgtcgtcctcctcgacaggttcccgacgct 447 |||||||||||||||||||| |||||| |||| Sbjct: 391 ttcgtcgtcctcctcgacagcttcccgccgct 422 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 798 tcctcggtgtccgtgattgggacctcacggtggacagg 835 ||||||| ||||||| ||| ||||||||||||||||| Sbjct: 779 tcctcggcatccgtgactggaacctcacggtggacagg 816
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 catggtggcgccggcggccgcg 169 |||||||||||||||||||||| Sbjct: 1863820 catggtggcgccggcggccgcg 1863841
>gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complete sequence Length = 154706 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 cacacacaaatacacaacagacatac 43 ||||||||||||||||||| |||||| Sbjct: 97721 cacacacaaatacacaacacacatac 97746
>emb|CT829082.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022B10, full insert sequence Length = 768 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 625 acccaaagaaaccataggctg 645
>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132E09-OSIGBa0108L24, complete sequence Length = 130140 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 57382 acccaaagaaaccataggctg 57402
>ref|NM_001060667.1| Oryza sativa (japonica cultivar-group) Os04g0659000 (Os04g0659000) mRNA, complete cds Length = 597 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 429 acccaaagaaaccataggctg 449
>emb|AM167904.1| Bordetella avium 197N complete genome Length = 3732255 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 900 ccgtggccgccaccgccgcca 920 ||||||||||||||||||||| Sbjct: 1111005 ccgtggccgccaccgccgcca 1110985
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 tccgtggccgccaccgccgcc 919 ||||||||||||||||||||| Sbjct: 160323 tccgtggccgccaccgccgcc 160343
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 900 ccgtggccgccaccgccgcca 920 ||||||||||||||||||||| Sbjct: 45596 ccgtggccgccaccgccgcca 45576
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 gccgccaccgccgccatcgta 925 ||||||||||||||||||||| Sbjct: 77513 gccgccaccgccgccatcgta 77493
>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence Length = 209416 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 8 ataccccaatcacacacaaatacacaacagaca 40 |||||||||||||||||| | ||| |||||||| Sbjct: 167464 ataccccaatcacacacagacacagaacagaca 167432
>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence Length = 186496 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 8 ataccccaatcacacacaaatacacaacagaca 40 |||||||||||||||||| | ||| |||||||| Sbjct: 41281 ataccccaatcacacacagacacagaacagaca 41249
>gb|AC104286.11| Drosophila melanogaster X BAC RP98-13J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176393 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 tccgtggccgccaccgccgcc 919 ||||||||||||||||||||| Sbjct: 30801 tccgtggccgccaccgccgcc 30821
>ref|NM_001014706.1| Drosophila melanogaster CG13376-RA (CG13376), mRNA Length = 582 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 899 tccgtggccgccaccgccgcc 919 ||||||||||||||||||||| Sbjct: 537 tccgtggccgccaccgccgcc 517
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 ctggcgcgccggcgccggcgg 348 ||||||||||||||||||||| Sbjct: 823080 ctggcgcgccggcgccggcgg 823100
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 tgcccaacgccacggacggcc 518 ||||||||||||||||||||| Sbjct: 347236 tgcccaacgccacggacggcc 347256
>gb|AC135464.13| Medicago truncatula clone mth2-17k21, complete sequence Length = 105376 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 gaataccccaatcacacacaaatac 30 |||||||||||||| |||||||||| Sbjct: 96916 gaataccccaatcaaacacaaatac 96892
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 88705 acccaaagaaaccataggctg 88725
>tpg|BK002951.1| TPA_inf: Drosophila melanogaster HDC16773 (HDC16773) gene, complete cds Length = 3089 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 tccgtggccgccaccgccgcc 919 ||||||||||||||||||||| Sbjct: 46 tccgtggccgccaccgccgcc 66
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 gccgccaccgccgccatcgta 925 ||||||||||||||||||||| Sbjct: 6359660 gccgccaccgccgccatcgta 6359640
>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5, complete sequence Length = 162086 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 cacacacaaatacacaacagacata 42 ||||||||||||||||||| ||||| Sbjct: 86219 cacacacaaatacacaacacacata 86195
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 893 ctcgggtccgtggccgccaccgccgccat 921 ||||||| |||||| |||||||||||||| Sbjct: 2026631 ctcgggttcgtggcggccaccgccgccat 2026603
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcatggtggcgccggcggccg 167 ||||||||||||||||||||| Sbjct: 149446 tcatggtggcgccggcggccg 149466
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcatggtggcgccggcggccg 167 ||||||||||||||||||||| Sbjct: 305230 tcatggtggcgccggcggccg 305250
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 88605 acccaaagaaaccataggctg 88625
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 7988 acccaaagaaaccataggctg 8008
>emb|AL050231.2|DMBR37P7 Drosophila melanogaster BAC clone BACR37P7 Length = 102619 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 tccgtggccgccaccgccgcc 919 ||||||||||||||||||||| Sbjct: 25553 tccgtggccgccaccgccgcc 25573
>emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like and Gtl2 gene Length = 111805 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 8 ataccccaatcacacacaaatacacaacagaca 40 |||||||||||||||||| | ||| |||||||| Sbjct: 75625 ataccccaatcacacacagacacagaacagaca 75657
>emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in linkage group 5, complete sequence Length = 134388 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 caatcacacacaaatacacaa 34 ||||||||||||||||||||| Sbjct: 19770 caatcacacacaaatacacaa 19790
>emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in linkage group 10, complete sequence Length = 199715 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cacacaaatacacaacagaca 40 ||||||||||||||||||||| Sbjct: 24200 cacacaaatacacaacagaca 24180
>dbj|AK063095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-B06, full insert sequence Length = 597 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 acccaaagaaaccataggctg 102 ||||||||||||||||||||| Sbjct: 429 acccaaagaaaccataggctg 449
>emb|AL606481.8| Zebrafish DNA sequence from clone BUSM1-99M4 Contains a novel gene for a protein with an immunoglobulin domain, complete sequence Length = 104752 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cacacaaatacacaacagaca 40 ||||||||||||||||||||| Sbjct: 6671 cacacaaatacacaacagaca 6691
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 ctggcgcgccggcgccggcgg 348 ||||||||||||||||||||| Sbjct: 854777 ctggcgcgccggcgccggcgg 854797
>emb|AL603743.8| Zebrafish DNA sequence from clone RP71-98D8 Contains the putative novel retrotransposon GYPSYDR2, the putative transposon TC1DR1 similar to C. elegans transposons and four CpG islands, complete sequence Length = 100214 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cacacaaatacacaacagaca 40 ||||||||||||||||||||| Sbjct: 7627 cacacaaatacacaacagaca 7607
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 762 ttgttggcttcttcgccaccc 782 ||||||||||||||||||||| Sbjct: 3774472 ttgttggcttcttcgccaccc 3774492
>gb|AC104805.3| Homo sapiens BAC clone RP11-571N1 from 4, complete sequence Length = 164347 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 989 tctatgcagacctgtcatgtg 1009 ||||||||||||||||||||| Sbjct: 22042 tctatgcagacctgtcatgtg 22062 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,600,842 Number of extensions: 7867564 Number of successful extensions: 217367 Number of sequences better than 10.0: 42 Number of HSP's gapped: 217362 Number of HSP's successfully gapped: 66 Length of query: 1091 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1068 Effective length of database: 18,503,978,556 Effective search space: 19762249097808 Effective search space used: 19762249097808 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)