ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf54c18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054892.1| Oryza sativa (japonica cultivar-group) Os02g0791200 (Os02g0791200) mRNA, complete cds Length = 2231 Score = 1164 bits (587), Expect = 0.0 Identities = 1010/1151 (87%) Strand = Plus / Plus Query: 373 gcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctccggcgag 432 ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct: 514 gcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgag 573 Query: 433 cgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctcgagtac 492 || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 574 cggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtac 633 Query: 493 aacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcactacgcc 552 ||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 634 aacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgcc 693 Query: 553 gcggcgcagggtcaccatgagattgtttctctgttgctcgaatccggtgtggagatcaac 612 || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 694 gccgcgcagggtcaccatgagattgtttctctgttgctcgaatccggcgtcgagatcaac 753 Query: 613 ctcaggaattatagggggcagactgctctaatgcaagcctgccaatatggccactgggag 672 ||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 754 ctcaggaattacaggggccagactgctttaatgcaagcctgtcaatatggccactgggag 813 Query: 673 gttgttcagacactgatgctcttcaatgcaaatatccacaggacagattatttgaatggc 732 |||||||||||||||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 814 gttgttcagacactgatgcttttcaatgcaaatgttcataggacagattatttgaatggc 873 Query: 733 gggactgctatccattttgctgcactgcatggtcatgcccggtgccttcgtcttgtgctt 792 || | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 ggtagtgctctccattttgctgcactacatggtcatgcccggtgccttcgtcttgtgctt 933 Query: 793 gcagattatgtgccaagcatcccaaacttcttaaaccagacgaagcacagatcgtctgaa 852 || |||||||| || ||||| |||||||||| ||| || |||| |||| |||||| Sbjct: 934 gcggattatgttcccagcatgccaaacttctggaactcgatgaaggacagcctatctgaa 993 Query: 853 gaagtttcagatgctgattttgatgatgatggtttggtcaagatggtaaactggaaggca 912 |||| | || ||||||| ||||||| ||||||||| ||||||||||||| |||||| Sbjct: 994 gaaggtccatctgctgatcttgatgaagatggtttgttcaagatggtaaatcagaaggcg 1053 Query: 913 gatggaggcctaaccccacttcatatggcagcgttaaacggccatgtagagtgtgtacag 972 |||||||| || || || |||||||||||||||||||| || |||||||||||||| || Sbjct: 1054 gatggaggactgactccgcttcatatggcagcgttaaatgggcatgtagagtgtgtgcaa 1113 Query: 973 ttgttgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatc 1032 ||||| ||||| ||||||| || ||| ||||| ||| |||||||||||||||||||| Sbjct: 1114 ttgttactggacttgggagcatctgttattgaggccactattgaagatggaacaactatt 1173 Query: 1033 gaccttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgta 1092 ||| | ||||| | ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1174 gacttaataggagctggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtc 1233 Query: 1093 tgttgtcaacttcttattgctcgaggagccaaccttgctgccaaaaatgccagtggctcg 1152 ||||||||||||||||||||||||||||| | |||| |||| | ||||| || |||| | Sbjct: 1234 tgttgtcaacttcttattgctcgaggagctagcctttctgcacagaatgctagcggctgg 1293 Query: 1153 accccgttaatggtagctcattcatggcatagaaactctatcgaggaaattttgagtaat 1212 |||||||| |||||||||| ||||||||||| |||||| | ||||||||| | || || Sbjct: 1294 accccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaaa 1353 Query: 1213 gaaccagggggtcaaatacgtactcttccttctccatatttgtgcctcccacttatgagt 1272 ||||||| | ||| |||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1354 gaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgagt 1413 Query: 1273 atcatgagcattgccagggagtgtggttggaggtacctaaacaagtcacctgtatgtatt 1332 |||||||||||||||||||| | ||| ||||||||||||||| | ||||||||||||||| Sbjct: 1414 atcatgagcattgccagggaatttggctggaggtacctaaaccaatcacctgtatgtatt 1473 Query: 1333 gacccatgtgctgtctgcttagatgggagctgctctgttgctgcagaaggatgcaagcat 1392 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 1474 gacccatgtgctgtctgcttagaaggaagctgctctgttgctgcagaaggatgcaaacat 1533 Query: 1393 gagttctgcacgagatgcgccctatacctatgctcgaccagctacacgtcggcgaacccc 1452 || |||||||||||||| || ||||||| ||||| ||||| ||||| || | || ||| Sbjct: 1534 gaattctgcacgagatgtgctttatacctttgctcaaccagttacacatcagtgagccca 1593 Query: 1453 gcgggcgcaataccgtgcccgctctgccggcacccgatcatctccttcgtggcgctccct 1512 || || || ||||| ||||| ||||| || ||||| |||||| | ||| ||||| ||| Sbjct: 1594 gcaggtgccataccatgccctctctgtcgacacccaatcatcgctttcactgcgcttcct 1653 Query: 1513 ggcacaagccc 1523 || |||||||| Sbjct: 1654 gggacaagccc 1664 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1686 ggcgatgaagctgaacccgtcgttctgcatgggcgccatgga 1727 |||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 1842 ggcgatgaagcttaacccgtcgttttgtatgggtgctatgga 1883
>dbj|AK120632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H21, full insert sequence Length = 2234 Score = 1164 bits (587), Expect = 0.0 Identities = 1010/1151 (87%) Strand = Plus / Plus Query: 373 gcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctccggcgag 432 ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct: 515 gcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgag 574 Query: 433 cgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctcgagtac 492 || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 575 cggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtac 634 Query: 493 aacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcactacgcc 552 ||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 635 aacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgcc 694 Query: 553 gcggcgcagggtcaccatgagattgtttctctgttgctcgaatccggtgtggagatcaac 612 || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 695 gccgcgcagggtcaccatgagattgtttctctgttgctcgaatccggcgtcgagatcaac 754 Query: 613 ctcaggaattatagggggcagactgctctaatgcaagcctgccaatatggccactgggag 672 ||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 755 ctcaggaattacaggggccagactgctttaatgcaagcctgtcaatatggccactgggag 814 Query: 673 gttgttcagacactgatgctcttcaatgcaaatatccacaggacagattatttgaatggc 732 |||||||||||||||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 815 gttgttcagacactgatgcttttcaatgcaaatgttcataggacagattatttgaatggc 874 Query: 733 gggactgctatccattttgctgcactgcatggtcatgcccggtgccttcgtcttgtgctt 792 || | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 875 ggtagtgctctccattttgctgcactacatggtcatgcccggtgccttcgtcttgtgctt 934 Query: 793 gcagattatgtgccaagcatcccaaacttcttaaaccagacgaagcacagatcgtctgaa 852 || |||||||| || ||||| |||||||||| ||| || |||| |||| |||||| Sbjct: 935 gcggattatgttcccagcatgccaaacttctggaactcgatgaaggacagcctatctgaa 994 Query: 853 gaagtttcagatgctgattttgatgatgatggtttggtcaagatggtaaactggaaggca 912 |||| | || ||||||| ||||||| ||||||||| ||||||||||||| |||||| Sbjct: 995 gaaggtccatctgctgatcttgatgaagatggtttgttcaagatggtaaatcagaaggcg 1054 Query: 913 gatggaggcctaaccccacttcatatggcagcgttaaacggccatgtagagtgtgtacag 972 |||||||| || || || |||||||||||||||||||| || |||||||||||||| || Sbjct: 1055 gatggaggactgactccgcttcatatggcagcgttaaatgggcatgtagagtgtgtgcaa 1114 Query: 973 ttgttgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatc 1032 ||||| ||||| ||||||| || ||| ||||| ||| |||||||||||||||||||| Sbjct: 1115 ttgttactggacttgggagcatctgttattgaggccactattgaagatggaacaactatt 1174 Query: 1033 gaccttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgta 1092 ||| | ||||| | ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1175 gacttaataggagctggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtc 1234 Query: 1093 tgttgtcaacttcttattgctcgaggagccaaccttgctgccaaaaatgccagtggctcg 1152 ||||||||||||||||||||||||||||| | |||| |||| | ||||| || |||| | Sbjct: 1235 tgttgtcaacttcttattgctcgaggagctagcctttctgcacagaatgctagcggctgg 1294 Query: 1153 accccgttaatggtagctcattcatggcatagaaactctatcgaggaaattttgagtaat 1212 |||||||| |||||||||| ||||||||||| |||||| | ||||||||| | || || Sbjct: 1295 accccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaaa 1354 Query: 1213 gaaccagggggtcaaatacgtactcttccttctccatatttgtgcctcccacttatgagt 1272 ||||||| | ||| |||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1355 gaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgagt 1414 Query: 1273 atcatgagcattgccagggagtgtggttggaggtacctaaacaagtcacctgtatgtatt 1332 |||||||||||||||||||| | ||| ||||||||||||||| | ||||||||||||||| Sbjct: 1415 atcatgagcattgccagggaatttggctggaggtacctaaaccaatcacctgtatgtatt 1474 Query: 1333 gacccatgtgctgtctgcttagatgggagctgctctgttgctgcagaaggatgcaagcat 1392 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 1475 gacccatgtgctgtctgcttagaaggaagctgctctgttgctgcagaaggatgcaaacat 1534 Query: 1393 gagttctgcacgagatgcgccctatacctatgctcgaccagctacacgtcggcgaacccc 1452 || |||||||||||||| || ||||||| ||||| ||||| ||||| || | || ||| Sbjct: 1535 gaattctgcacgagatgtgctttatacctttgctcaaccagttacacatcagtgagccca 1594 Query: 1453 gcgggcgcaataccgtgcccgctctgccggcacccgatcatctccttcgtggcgctccct 1512 || || || ||||| ||||| ||||| || ||||| |||||| | ||| ||||| ||| Sbjct: 1595 gcaggtgccataccatgccctctctgtcgacacccaatcatcgctttcactgcgcttcct 1654 Query: 1513 ggcacaagccc 1523 || |||||||| Sbjct: 1655 gggacaagccc 1665 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1686 ggcgatgaagctgaacccgtcgttctgcatgggcgccatgga 1727 |||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 1843 ggcgatgaagcttaacccgtcgttttgtatgggtgctatgga 1884
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 280 bits (141), Expect = 2e-71 Identities = 186/201 (92%) Strand = Plus / Plus Query: 373 gcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctccggcgag 432 ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct: 33614882 gcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgag 33614941 Query: 433 cgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctcgagtac 492 || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 33614942 cggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtac 33615001 Query: 493 aacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcactacgcc 552 ||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 33615002 aacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgcc 33615061 Query: 553 gcggcgcagggtcaccatgag 573 || |||||||||||||||||| Sbjct: 33615062 gccgcgcagggtcaccatgag 33615082 Score = 159 bits (80), Expect = 5e-35 Identities = 104/112 (92%) Strand = Plus / Plus Query: 712 aggacagattatttgaatggcgggactgctatccattttgctgcactgcatggtcatgcc 771 ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||| Sbjct: 33615490 aggacagattatttgaatggcggtagtgctctccattttgctgcactacatggtcatgcc 33615549 Query: 772 cggtgccttcgtcttgtgcttgcagattatgtgccaagcatcccaaacttct 823 ||||||||||||||||||||||| |||||||| || ||||| |||||||||| Sbjct: 33615550 cggtgccttcgtcttgtgcttgcggattatgttcccagcatgccaaacttct 33615601 Score = 149 bits (75), Expect = 5e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 1152 gaccccgttaatggtagctcattcatggcatagaaactctatcgaggaaattttgagtaa 1211 ||||||||| |||||||||| ||||||||||| |||||| | ||||||||| | || || Sbjct: 33616452 gaccccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaa 33616511 Query: 1212 tgaaccagggggtcaaatacgtactcttccttctccatatttgtgcctcccacttatgag 1271 ||||||| | ||| |||||| ||| ||||||||||||||||||||||||| |||||||| Sbjct: 33616512 agaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgag 33616571 Query: 1272 tatcatgagcattgccagg 1290 ||||||||||||||||||| Sbjct: 33616572 tatcatgagcattgccagg 33616590 Score = 135 bits (68), Expect = 7e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 1287 cagggagtgtggttggaggtacctaaacaagtcacctgtatgtattgacccatgtgctgt 1346 |||||| | ||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 33616835 cagggaatttggctggaggtacctaaaccaatcacctgtatgtattgacccatgtgctgt 33616894 Query: 1347 ctgcttagatgggagctgctctgttgctgcagaagg 1382 ||||||||| || ||||||||||||||||||||||| Sbjct: 33616895 ctgcttagaaggaagctgctctgttgctgcagaagg 33616930 Score = 123 bits (62), Expect = 3e-24 Identities = 71/74 (95%) Strand = Plus / Plus Query: 632 agactgctctaatgcaagcctgccaatatggccactgggaggttgttcagacactgatgc 691 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 33615330 agactgctttaatgcaagcctgtcaatatggccactgggaggttgttcagacactgatgc 33615389 Query: 692 tcttcaatgcaaat 705 | |||||||||||| Sbjct: 33615390 ttttcaatgcaaat 33615403 Score = 123 bits (62), Expect = 3e-24 Identities = 128/150 (85%) Strand = Plus / Plus Query: 882 tggtttggtcaagatggtaaactggaaggcagatggaggcctaaccccacttcatatggc 941 ||||||| ||||||||||||| |||||| |||||||| || || || ||||||||||| Sbjct: 33615749 tggtttgttcaagatggtaaatcagaaggcggatggaggactgactccgcttcatatggc 33615808 Query: 942 agcgttaaacggccatgtagagtgtgtacagttgttgttggacctgggagcgtcagtttc 1001 ||||||||| || |||||||||||||| || ||||| ||||| ||||||| || ||| Sbjct: 33615809 agcgttaaatgggcatgtagagtgtgtgcaattgttactggacttgggagcatctgttat 33615868 Query: 1002 tgaggtcaccattgaagatggaacaactat 1031 ||||| ||| |||||||||||||||||||| Sbjct: 33615869 tgaggccactattgaagatggaacaactat 33615898 Score = 91.7 bits (46), Expect = 1e-14 Identities = 55/58 (94%) Strand = Plus / Plus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 33615182 agattgtttctctgttgctcgaatccggcgtcgagatcaacctcaggaattacagggg 33615239 Score = 75.8 bits (38), Expect = 6e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1048 ggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgttgtcaa 1101 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 33616127 ggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtctgttgtcaa 33616180 Score = 63.9 bits (32), Expect = 2e-06 Identities = 116/144 (80%) Strand = Plus / Plus Query: 1380 aggatgcaagcatgagttctgcacgagatgcgccctatacctatgctcgaccagctacac 1439 ||||||||| ||||| |||||||||||||| || ||||||| ||||| ||||| ||||| Sbjct: 33617225 aggatgcaaacatgaattctgcacgagatgtgctttatacctttgctcaaccagttacac 33617284 Query: 1440 gtcggcgaaccccgcgggcgcaataccgtgcccgctctgccggcacccgatcatctcctt 1499 || | || ||| || || || ||||| ||||| ||||| || ||||| |||||| | || Sbjct: 33617285 atcagtgagcccagcaggtgccataccatgccctctctgtcgacacccaatcatcgcttt 33617344 Query: 1500 cgtggcgctccctggcacaagccc 1523 | ||||| ||||| |||||||| Sbjct: 33617345 cactgcgcttcctgggacaagccc 33617368 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1686 ggcgatgaagctgaacccgtcgttctgcatgggcgccatgga 1727 |||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 33617546 ggcgatgaagcttaacccgtcgttttgtatgggtgctatgga 33617587
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 280 bits (141), Expect = 2e-71 Identities = 186/201 (92%) Strand = Plus / Plus Query: 373 gcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctccggcgag 432 ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct: 85553 gcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgag 85612 Query: 433 cgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctcgagtac 492 || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 85613 cggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtac 85672 Query: 493 aacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcactacgcc 552 ||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 85673 aacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgcc 85732 Query: 553 gcggcgcagggtcaccatgag 573 || |||||||||||||||||| Sbjct: 85733 gccgcgcagggtcaccatgag 85753 Score = 159 bits (80), Expect = 5e-35 Identities = 104/112 (92%) Strand = Plus / Plus Query: 712 aggacagattatttgaatggcgggactgctatccattttgctgcactgcatggtcatgcc 771 ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||| Sbjct: 86161 aggacagattatttgaatggcggtagtgctctccattttgctgcactacatggtcatgcc 86220 Query: 772 cggtgccttcgtcttgtgcttgcagattatgtgccaagcatcccaaacttct 823 ||||||||||||||||||||||| |||||||| || ||||| |||||||||| Sbjct: 86221 cggtgccttcgtcttgtgcttgcggattatgttcccagcatgccaaacttct 86272 Score = 149 bits (75), Expect = 5e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 1152 gaccccgttaatggtagctcattcatggcatagaaactctatcgaggaaattttgagtaa 1211 ||||||||| |||||||||| ||||||||||| |||||| | ||||||||| | || || Sbjct: 87123 gaccccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaa 87182 Query: 1212 tgaaccagggggtcaaatacgtactcttccttctccatatttgtgcctcccacttatgag 1271 ||||||| | ||| |||||| ||| ||||||||||||||||||||||||| |||||||| Sbjct: 87183 agaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgag 87242 Query: 1272 tatcatgagcattgccagg 1290 ||||||||||||||||||| Sbjct: 87243 tatcatgagcattgccagg 87261 Score = 135 bits (68), Expect = 7e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 1287 cagggagtgtggttggaggtacctaaacaagtcacctgtatgtattgacccatgtgctgt 1346 |||||| | ||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 87506 cagggaatttggctggaggtacctaaaccaatcacctgtatgtattgacccatgtgctgt 87565 Query: 1347 ctgcttagatgggagctgctctgttgctgcagaagg 1382 ||||||||| || ||||||||||||||||||||||| Sbjct: 87566 ctgcttagaaggaagctgctctgttgctgcagaagg 87601 Score = 123 bits (62), Expect = 3e-24 Identities = 71/74 (95%) Strand = Plus / Plus Query: 632 agactgctctaatgcaagcctgccaatatggccactgggaggttgttcagacactgatgc 691 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86001 agactgctttaatgcaagcctgtcaatatggccactgggaggttgttcagacactgatgc 86060 Query: 692 tcttcaatgcaaat 705 | |||||||||||| Sbjct: 86061 ttttcaatgcaaat 86074 Score = 123 bits (62), Expect = 3e-24 Identities = 128/150 (85%) Strand = Plus / Plus Query: 882 tggtttggtcaagatggtaaactggaaggcagatggaggcctaaccccacttcatatggc 941 ||||||| ||||||||||||| |||||| |||||||| || || || ||||||||||| Sbjct: 86420 tggtttgttcaagatggtaaatcagaaggcggatggaggactgactccgcttcatatggc 86479 Query: 942 agcgttaaacggccatgtagagtgtgtacagttgttgttggacctgggagcgtcagtttc 1001 ||||||||| || |||||||||||||| || ||||| ||||| ||||||| || ||| Sbjct: 86480 agcgttaaatgggcatgtagagtgtgtgcaattgttactggacttgggagcatctgttat 86539 Query: 1002 tgaggtcaccattgaagatggaacaactat 1031 ||||| ||| |||||||||||||||||||| Sbjct: 86540 tgaggccactattgaagatggaacaactat 86569 Score = 91.7 bits (46), Expect = 1e-14 Identities = 55/58 (94%) Strand = Plus / Plus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 85853 agattgtttctctgttgctcgaatccggcgtcgagatcaacctcaggaattacagggg 85910 Score = 75.8 bits (38), Expect = 6e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1048 ggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgttgtcaa 1101 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 86798 ggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtctgttgtcaa 86851 Score = 63.9 bits (32), Expect = 2e-06 Identities = 116/144 (80%) Strand = Plus / Plus Query: 1380 aggatgcaagcatgagttctgcacgagatgcgccctatacctatgctcgaccagctacac 1439 ||||||||| ||||| |||||||||||||| || ||||||| ||||| ||||| ||||| Sbjct: 87896 aggatgcaaacatgaattctgcacgagatgtgctttatacctttgctcaaccagttacac 87955 Query: 1440 gtcggcgaaccccgcgggcgcaataccgtgcccgctctgccggcacccgatcatctcctt 1499 || | || ||| || || || ||||| ||||| ||||| || ||||| |||||| | || Sbjct: 87956 atcagtgagcccagcaggtgccataccatgccctctctgtcgacacccaatcatcgcttt 88015 Query: 1500 cgtggcgctccctggcacaagccc 1523 | ||||| ||||| |||||||| Sbjct: 88016 cactgcgcttcctgggacaagccc 88039 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1686 ggcgatgaagctgaacccgtcgttctgcatgggcgccatgga 1727 |||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 88217 ggcgatgaagcttaacccgtcgttttgtatgggtgctatgga 88258
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 268 bits (135), Expect = 8e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| Sbjct: 38942 ctttgagcatccatggggttcctcaaccttgtgggcaactcctttgggtgctcggcttcc 38883 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || ||| |||||| |||||||||||||||||||||||| ||| Sbjct: 38882 ggcgagcggctcgtctcggcggccagggacgacgacctgcaggaggcgcgcgcgctgctc 38823 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 38822 gagtacaacccgcggctcgcctggtactccactttcggcggccgcaactcgccgctgcac 38763 Query: 547 tacgccgcggcgcagggtcaccatgag 573 |||||||| |||||||||||||||||| Sbjct: 38762 tacgccgccgcgcagggtcaccatgag 38736 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattataggg 628 ||||||||||||| || |||||||||| || ||||||||||| |||||||| |||| Sbjct: 38630 agattgtttctctattcctcgaatccgacgtcgagatcaaccttaggaattacaggg 38574
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 268 bits (135), Expect = 8e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| Sbjct: 12143096 ctttgagcatccatggggttcctcaaccttgtgggcaactcctttgggtgctcggcttcc 12143037 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || ||| |||||| |||||||||||||||||||||||| ||| Sbjct: 12143036 ggcgagcggctcgtctcggcggccagggacgacgacctgcaggaggcgcgcgcgctgctc 12142977 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 12142976 gagtacaacccgcggctcgcctggtactccactttcggcggccgcaactcgccgctgcac 12142917 Query: 547 tacgccgcggcgcagggtcaccatgag 573 |||||||| |||||||||||||||||| Sbjct: 12142916 tacgccgccgcgcagggtcaccatgag 12142890 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattataggg 628 ||||||||||||| || |||||||||| || ||||||||||| |||||||| |||| Sbjct: 12142784 agattgtttctctattcctcgaatccgacgtcgagatcaaccttaggaattacaggg 12142728
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 268 bits (135), Expect = 8e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| Sbjct: 30850725 ctttgagcatccatggggttcctcaaccttgtgggcaactcctttgggtgctcggcttcc 30850666 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||| Sbjct: 30850665 ggcgagcggctcgtctcggcggccagggacggcgacctgcaggaggcgcgcgcgctgctc 30850606 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 30850605 gagtacaacccgcggctcgcctggtactccactttcggcggccgcaactcgccgctgcac 30850546 Query: 547 tacgccgcggcgcagggtcaccatgag 573 ||| |||| |||||||||||||||||| Sbjct: 30850545 tacaccgccgcgcagggtcaccatgag 30850519 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 574 attgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 ||||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 30850412 attgtttctctgttgctcgaatccgacgtcaagatcaacctcaggaattacagggg 30850357
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 268 bits (135), Expect = 8e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| Sbjct: 51092 ctttgagcatccatggggttcctcaaccttgtgggcaactcctttgggtgctcggcttcc 51033 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||| Sbjct: 51032 ggcgagcggctcgtctcggcggccagggacggcgacctgcaggaggcgcgcgcgctgctc 50973 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||||| Sbjct: 50972 gagtacaacccgcggctcgcctggtactccactttcggcggccgcaactcgccgctgcac 50913 Query: 547 tacgccgcggcgcagggtcaccatgag 573 ||| |||| |||||||||||||||||| Sbjct: 50912 tacaccgccgcgcagggtcaccatgag 50886 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 574 attgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 ||||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 50779 attgtttctctgttgctcgaatccgacgtcaagatcaacctcaggaattacagggg 50724
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 252 bits (127), Expect = 5e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| Sbjct: 16763716 ctttgagcatccatggggttcctcaaccttgtgggcaactccattgggtgctcggcttcc 16763775 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || | | ||||||||||||||||||||||||||||||| ||| Sbjct: 16763776 ggcgagcggctcgtctcggcggacagggacggcgacctgcaggaggcgcgcgcgctgctc 16763835 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| ||||| |||||||||||||| |||||| Sbjct: 16763836 gagtacaacccgcggctcgcctggtactccactttcggtggccgcaactcgccgctgcac 16763895 Query: 547 tacgccgcggcgcagggtcaccatgag 573 |||||||| |||||||||||||||||| Sbjct: 16763896 tacgccgccgcgcagggtcaccatgag 16763922 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 16764027 agattgtttctctgttgctcgaatccgaagtcgagatcaacctcaggaattacagggg 16764084
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 252 bits (127), Expect = 5e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 367 ctttgggcatccatggggttcctcagcctggtgggcaactccttcgggtgctcggcctcc 426 ||||| ||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| Sbjct: 14147 ctttgagcatccatggggttcctcaaccttgtgggcaactccattgggtgctcggcttcc 14206 Query: 427 ggcgagcgcctcgtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctc 486 |||||||| |||||||| || | | ||||||||||||||||||||||||||||||| ||| Sbjct: 14207 ggcgagcggctcgtctcggcggacagggacggcgacctgcaggaggcgcgcgcgctgctc 14266 Query: 487 gagtacaacccccggctcgctcgctactccacattcggcggccgcaactcgcccctgcac 546 ||||||||||| |||||||| | |||||||| ||||| |||||||||||||| |||||| Sbjct: 14267 gagtacaacccgcggctcgcctggtactccactttcggtggccgcaactcgccgctgcac 14326 Query: 547 tacgccgcggcgcagggtcaccatgag 573 |||||||| |||||||||||||||||| Sbjct: 14327 tacgccgccgcgcagggtcaccatgag 14353 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 572 agattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 14458 agattgtttctctgttgctcgaatccgaagtcgagatcaacctcaggaattacagggg 14515
>ref|NM_001059068.1| Oryza sativa (japonica cultivar-group) Os04g0351300 (Os04g0351300) mRNA, complete cds Length = 3480 Score = 214 bits (108), Expect = 1e-51 Identities = 165/184 (89%) Strand = Plus / Plus Query: 379 atggggttcctcagcctggtgggcaactccttcgggtgctcggcctccggcgagcgcctc 438 ||||||||||||| ||| |||||||||||| | ||||||||||| ||||||||||| ||| Sbjct: 1 atggggttcctcaaccttgtgggcaactccattgggtgctcggcttccggcgagcggctc 60 Query: 439 gtctccgctgcccgggacggcgacctgcaggaggcgcgcgcgctcctcgagtacaacccc 498 ||||| || | | ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 gtctcggcggacagggacggcgacctgcaggaggcgcgcgcgctgctcgagtacaacccg 120 Query: 499 cggctcgctcgctactccacattcggcggccgcaactcgcccctgcactacgccgcggcg 558 |||||||| | |||||||| ||||| |||||||||||||| |||||||||||||| ||| Sbjct: 121 cggctcgcctggtactccactttcggtggccgcaactcgccgctgcactacgccgccgcg 180 Query: 559 cagg 562 |||| Sbjct: 181 cagg 184 Score = 81.8 bits (41), Expect = 1e-11 Identities = 53/57 (92%) Strand = Plus / Plus Query: 573 gattgtttctctgttgctcgaatccggtgtggagatcaacctcaggaattatagggg 629 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 184 gattgtttctctgttgctcgaatccgaagtcgagatcaacctcaggaattacagggg 240
>emb|CT829611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130O21, full insert sequence Length = 1469 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 977 tgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatcgacc 1036 |||| ||||| ||||| || ||||| |||||||| || | ||||| ||||||| || | Sbjct: 394 tgttagaccttggagcctctgtttcagaggtcactatcaatgatggttcaactattgatc 453 Query: 1037 ttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgtt 1096 | |||| ||||| ||||| || || || ||||| || |||||||||| ||||||||| | Sbjct: 454 tcataggttcaggaagcacacctctccactatgcggcctgtggtggaagtgctgtatgct 513 Query: 1097 gtcaacttcttattgc 1112 ||||||||||| |||| Sbjct: 514 gtcaacttcttgttgc 529
>ref|NM_001067921.1| Oryza sativa (japonica cultivar-group) Os08g0258200 (Os08g0258200) mRNA, complete cds Length = 1758 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 977 tgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatcgacc 1036 |||| ||||| ||||| || ||||| |||||||| || | ||||| ||||||| || | Sbjct: 702 tgttagaccttggagcctctgtttcagaggtcactatcaatgatggttcaactattgatc 761 Query: 1037 ttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgtt 1096 | |||| ||||| ||||| || || || ||||| || |||||||||| ||||||||| | Sbjct: 762 tcataggttcaggaagcacacctctccactatgcggcctgtggtggaagtgctgtatgct 821 Query: 1097 gtcaacttcttattgc 1112 ||||||||||| |||| Sbjct: 822 gtcaacttcttgttgc 837 Score = 61.9 bits (31), Expect = 9e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 560 agggtcaccatgagattgtttctctgttgctcgaatccggtgtggagatcaacctcagga 619 |||| |||||||||||||||||||| | | || || ||||| || ||||||||||||| Sbjct: 285 agggccaccatgagattgtttctctcctaattgagtctggtgttgatatcaacctcagga 344 Query: 620 attatagggggcagactgctctaatgcaagc 650 | | || || |||||||||||||||||||| Sbjct: 345 actgcagaggacagactgctctaatgcaagc 375
>dbj|AK120159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030H09, full insert sequence Length = 1854 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 977 tgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatcgacc 1036 |||| ||||| ||||| || ||||| |||||||| || | ||||| ||||||| || | Sbjct: 776 tgttagaccttggagcctctgtttcagaggtcactatcaatgatggttcaactattgatc 835 Query: 1037 ttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgtt 1096 | |||| ||||| ||||| || || || ||||| || |||||||||| ||||||||| | Sbjct: 836 tcataggttcaggaagcacacctctccactatgcggcctgtggtggaagtgctgtatgct 895 Query: 1097 gtcaacttcttattgc 1112 ||||||||||| |||| Sbjct: 896 gtcaacttcttgttgc 911 Score = 54.0 bits (27), Expect = 0.002 Identities = 75/91 (82%) Strand = Plus / Plus Query: 560 agggtcaccatgagattgtttctctgttgctcgaatccggtgtggagatcaacctcagga 619 |||| |||||||||||||||||||| | | || || ||||| || ||||||| ||||| Sbjct: 359 agggccaccatgagattgtttctctcctaattgagtctggtgttgatatcaaccccagga 418 Query: 620 attatagggggcagactgctctaatgcaagc 650 | | || || |||||||||||||||||||| Sbjct: 419 actgcagaggacagactgctctaatgcaagc 449
>dbj|AK067289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103K22, full insert sequence Length = 1759 Score = 63.9 bits (32), Expect = 2e-06 Identities = 110/136 (80%) Strand = Plus / Plus Query: 977 tgttggacctgggagcgtcagtttctgaggtcaccattgaagatggaacaactatcgacc 1036 |||| ||||| ||||| || ||||| |||||||| || | ||||| ||||||| || | Sbjct: 703 tgttagaccttggagcctctgtttcagaggtcactatcaatgatggttcaactattgatc 762 Query: 1037 ttctaggatcaggtagcaccccacttcattatgctgcttgtggtggaaatgctgtatgtt 1096 | |||| ||||| ||||| || || || ||||| || |||||||||| ||||||||| | Sbjct: 763 tcataggttcaggaagcacacctctccactatgcggcctgtggtggaagtgctgtatgct 822 Query: 1097 gtcaacttcttattgc 1112 ||||||||||| |||| Sbjct: 823 gtcaacttcttgttgc 838 Score = 61.9 bits (31), Expect = 9e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 560 agggtcaccatgagattgtttctctgttgctcgaatccggtgtggagatcaacctcagga 619 |||| |||||||||||||||||||| | | || || ||||| || ||||||||||||| Sbjct: 286 agggccaccatgagattgtttctctcctaattgagtctggtgttgatatcaacctcagga 345 Query: 620 attatagggggcagactgctctaatgcaagc 650 | | || || |||||||||||||||||||| Sbjct: 346 actgcagaggacagactgctctaatgcaagc 376
>gb|AY950617.1| Lilium longiflorum pollen ankyrin-like protein mRNA, complete cds Length = 1906 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 643 atgcaagcctgccaatatggccactgggaggttgttcagacactgatgctcttca 697 ||||||||||||| | | || |||||||||||||| ||||| ||| ||||||||| Sbjct: 403 atgcaagcctgccgacacgggcactgggaggttgtgcagacgctgctgctcttca 457
>gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence Length = 147198 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1625 gcggcagtggcgtgcgcatgccgccg 1650 |||||||||||||||||||||||||| Sbjct: 107613 gcggcagtggcgtgcgcatgccgccg 107588
>ref|NM_116285.1| Arabidopsis thaliana catalytic (AT4G00600) mRNA, complete cds Length = 933 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1360 agctgctctgttgctgcagaagga 1383 |||||||||||||||||||||||| Sbjct: 576 agctgctctgttgctgcagaagga 599
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1445 cgaaccccgcgggcgcaataccgtgcccgc 1474 |||||| ||||||||||||||| ||||||| Sbjct: 772963 cgaaccgcgcgggcgcaataccctgcccgc 772934
>gb|AC191450.7| Rhesus Macaque BAC CH250-287H18 () complete sequence Length = 180230 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 cgaggcggcgggcgcctgtgatccc 129 |||||||||||||||||||| |||| Sbjct: 159915 cgaggcggcgggcgcctgtggtccc 159939
>ref|NM_001070344.1| Oryza sativa (japonica cultivar-group) Os09g0540500 (Os09g0540500) mRNA, complete cds Length = 1477 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 459 cgacctgcaggaggcgcgcgcgctcctcg 487 |||||||||||| |||||||||| ||||| Sbjct: 478 cgacctgcaggacgcgcgcgcgcgcctcg 506
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gaatcgcgggcgggcgggagc 94 ||||||||||||||||||||| Sbjct: 1077698 gaatcgcgggcgggcgggagc 1077718
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1364 gctctgttgctgcagaaggat 1384 ||||||||||||||||||||| Sbjct: 662574 gctctgttgctgcagaaggat 662594
>gb|AC140269.3| Mus musculus BAC clone RP23-322I5 from chromosome 3, complete sequence Length = 205887 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1326 atgtattgacccatgtgctgt 1346 ||||||||||||||||||||| Sbjct: 3592 atgtattgacccatgtgctgt 3572
>gb|AF542310.1| Parus major major isolate TT141 mitochondrial control region, partial sequence Length = 578 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1018 gatggaacaactatcgacctt 1038 ||||||||||||||||||||| Sbjct: 280 gatggaacaactatcgacctt 260
>gb|AC093627.4| Homo sapiens BAC clone RP11-90P13 from 7, complete sequence Length = 179269 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 tcccctcccctgttggtgtct 2021 ||||||||||||||||||||| Sbjct: 133974 tcccctcccctgttggtgtct 133954
>gb|AC093666.4| Homo sapiens BAC clone RP11-482G13 from 7, complete sequence Length = 157816 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 tcccctcccctgttggtgtct 2021 ||||||||||||||||||||| Sbjct: 146577 tcccctcccctgttggtgtct 146557
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 tcccctcccctgttggtgtct 2021 ||||||||||||||||||||| Sbjct: 144523 tcccctcccctgttggtgtct 144503
>gb|AC162903.3| Mus musculus BAC clone RP24-68D13 from chromosome 9, complete sequence Length = 198549 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1889 gcgcctgtttttcttctgaaa 1909 ||||||||||||||||||||| Sbjct: 170941 gcgcctgtttttcttctgaaa 170961
>gb|AY123418.1| Triticum aestivum putative ribosomal protein S18 mRNA, complete cds Length = 868 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1069 gctgcttgtggtggaaatgct 1089 ||||||||||||||||||||| Sbjct: 127 gctgcttgtggtggaaatgct 107
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 630 gcagactgctctaatgcaagc 650 ||||||||||||||||||||| Sbjct: 9625359 gcagactgctctaatgcaagc 9625339
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 459 cgacctgcaggaggcgcgcgcgctcctcg 487 |||||||||||| |||||||||| ||||| Sbjct: 20974430 cgacctgcaggacgcgcgcgcgcgcctcg 20974402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 847 tctgaagaagtttcagatgct 867 ||||||||||||||||||||| Sbjct: 3160789 tctgaagaagtttcagatgct 3160769
>gb|AC093614.4| Homo sapiens PAC clone RP1-164D18 from 7, complete sequence Length = 72666 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 tcccctcccctgttggtgtct 2021 ||||||||||||||||||||| Sbjct: 64863 tcccctcccctgttggtgtct 64843
>gb|AC024243.8| Homo sapiens BAC clone RP11-528I4 from 4, complete sequence Length = 163857 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gcggcgggcgcctgtgatccc 129 ||||||||||||||||||||| Sbjct: 87539 gcggcgggcgcctgtgatccc 87559
>gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome 9, complete sequence Length = 178684 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1889 gcgcctgtttttcttctgaaa 1909 ||||||||||||||||||||| Sbjct: 157919 gcgcctgtttttcttctgaaa 157899
>dbj|AB177896.1| Ralstonia solanacearum hpx4 gene for hypothetical protein, complete cds, strain:RS1000 Length = 4140 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 gaatcgcgggcgggcgggagc 94 ||||||||||||||||||||| Sbjct: 1838 gaatcgcgggcgggcgggagc 1818
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1562 tctgcgcgacgtgcccggcgg 1582 ||||||||||||||||||||| Sbjct: 1018805 tctgcgcgacgtgcccggcgg 1018825
>emb|BX537135.9| Zebrafish DNA sequence from clone DKEY-57B1 in linkage group 14, complete sequence Length = 108341 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1891 gcctgtttttcttctgaaagggtgt 1915 |||||||| |||||||||||||||| Sbjct: 104811 gcctgtttatcttctgaaagggtgt 104787
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 459 cgacctgcaggaggcgcgcgcgctcctcg 487 |||||||||||| |||||||||| ||||| Sbjct: 66519 cgacctgcaggacgcgcgcgcgcgcctcg 66491
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 847 tctgaagaagtttcagatgct 867 ||||||||||||||||||||| Sbjct: 75779 tctgaagaagtttcagatgct 75759
>dbj|AK120729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B04, full insert sequence Length = 1478 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 459 cgacctgcaggaggcgcgcgcgctcctcg 487 |||||||||||| |||||||||| ||||| Sbjct: 479 cgacctgcaggacgcgcgcgcgcgcctcg 507
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 630 gcagactgctctaatgcaagc 650 ||||||||||||||||||||| Sbjct: 22839 gcagactgctctaatgcaagc 22819
>emb|AL935313.7| Mouse DNA sequence from clone RP23-356H10 on chromosome 2, complete sequence Length = 54684 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1923 tgcctgttagtttggctggct 1943 ||||||||||||||||||||| Sbjct: 25272 tgcctgttagtttggctggct 25252
>gb|AC168267.1| Mus musculus BAC clone RP23-431L24 from chromosome 3, complete sequence Length = 187466 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1326 atgtattgacccatgtgctgt 1346 ||||||||||||||||||||| Sbjct: 125084 atgtattgacccatgtgctgt 125064
>gb|M25621.1|RABIGVLDHE Rabbit Ig lambda chain V-J-C region mRNA, 3' end, clone pDH9 Length = 481 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 199 ggtaaactggaaggcagatgg 219
>gb|M25618.1|RABIGVLDHB Rabbit Ig lambda chain V-J-C region mRNA, 3' end, clone pDH101 Length = 648 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 398 ggtaaactggaaggcagatgg 418
>gb|M25617.1|RABIGVLDHA Rabbit Ig lambda chain V-J-C region mRNA, partial cds, clone pDH8 Length = 627 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 466 ggtaaactggaaggcagatgg 486
>gb|M25619.1|RABIGVLDHC Rabbit Ig lambda chain V-J-C region mRNA, 3' end, clone pDH31 Length = 523 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 256 ggtaaactggaaggcagatgg 276
>gb|M17645.1|RABIGVLCLF Rabbit Ig lambda-chain J-C region mRNA, partial cds, clone pCL14 Length = 377 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 132 ggtaaactggaaggcagatgg 152
>gb|M23227.1|RABIGCMC2 Rabbit Ig germline lambda-chain gene C5 region Length = 336 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 122 ggtaaactggaaggcagatgg 142
>dbj|D00091.1|RABIGLAAA Oryctolagus cuniculus mRNA for Ig lambda chain, partial cds Length = 694 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ggtaaactggaaggcagatgg 917 ||||||||||||||||||||| Sbjct: 533 ggtaaactggaaggcagatgg 553 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 331,299,346 Number of extensions: 17954342 Number of successful extensions: 125818 Number of sequences better than 10.0: 52 Number of HSP's gapped: 125815 Number of HSP's successfully gapped: 84 Length of query: 2156 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2133 Effective length of database: 18,503,978,556 Effective search space: 39468986259948 Effective search space used: 39468986259948 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
