ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0235000:Os02g0235000 284 7e-77
2AK119427:Os07g0580700 29 6.9
3Os04g0609900:Os04g0609900 28 9.0

>Os02g0235000:Os02g0235000 |
          Length = 187
 Score =  284 bits (727), Expect = 7e-77
 Identities = 146/187 (78%), Positives = 152/187 (81%), Gaps = 13/187 (6%)
 Frame = +2

Query: 386 MVYHSSFIDDDGITKACGCPLLPLKTHIKGPAPASD-------------SDKADIIDEAI 526
           MVYHSSF+DD GITKACGCPLLPLKTHI+GPAPA D             +DKADI+DEAI
Sbjct: 1   MVYHSSFVDDTGITKACGCPLLPLKTHIRGPAPAFDQEPCQAADLCRAITDKADIVDEAI 60

Query: 527 TFFRANVFFKNFHVKSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXX 706
           TFFRANVFFKNF+VKSPADKLLIYLT YINIALKRLE CRTLAVGTKAIINLGLEK    
Sbjct: 61  TFFRANVFFKNFNVKSPADKLLIYLTFYINIALKRLEGCRTLAVGTKAIINLGLEKVPVP 120

Query: 707 XXXXXXXXXXXXXXQSQEEAELLRNYLKQIREETSGRLLNCAYRANGTPNKWWLAFAKRK 886
                         QSQEEAELLRNYLKQIREETSGRLLNCAYRANGTPNKWWLAFAKRK
Sbjct: 121 GEPGFPFPGLFTLPQSQEEAELLRNYLKQIREETSGRLLNCAYRANGTPNKWWLAFAKRK 180

Query: 887 FMNVVIL 907
           FMN+VIL
Sbjct: 181 FMNIVIL 187



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>AK119427:Os07g0580700 |
          Length = 1030

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 682 GIGESSCSWRTRISFPWTFHSPPISGGSRTVEELSEAD---KGGNKREAAQLR 831
           GIG  +C +R  +SFP TF    I+G    + E++  D    GG  R +   R
Sbjct: 432 GIGGKACHFRVCLSFPATF---SITGRDMMLGEITTVDVNETGGGARSSLSFR 481



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>Os04g0609900:Os04g0609900 |
          Length = 1105

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 811 REAAQLRLQS*WHSKQMVVGFCKEEVHERCHPLERKHISNSLRGVHVNPD 960
           REA Q R  S   S     GF + E  +R  PLER  I +  R +H+  D
Sbjct: 149 REAWQRRPNSAVRS-----GFARAEADDRLFPLERSRIQHPDRLIHLQQD 193


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,378,134
Number of extensions: 656280
Number of successful extensions: 1482
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1480
Number of HSP's successfully gapped: 3
Length of query: 372
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 270
Effective length of database: 11,315,673
Effective search space: 3055231710
Effective search space used: 3055231710
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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