ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf51m10 |
|---|---|
| Clone Library Name | barley_pub |
>Q9JM76:ARPC3_MOUSE Actin-related protein 2/3 complex subunit 3 - Mus musculus (Mouse)| Length = 178 Score = 132 bits (332), Expect = 3e-30 Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 2/170 (1%) Frame = +2 Query: 392 YHSSFIDDDGITKACG-CPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHV 568 YHSS +D D TK G LLPL++ KGPAP D DI+DEAI +F+ANVFFKN+ + Sbjct: 4 YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 60 Query: 569 KSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXXXXXXXXXXXXXXXX 748 K+ AD+ LIY+T YI+ LK+L+ C + + G K + LG+ Sbjct: 61 KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 120 Query: 749 QSQEEAELLRNYLKQIREETSGRLLNCAY-RANGTPNKWWLAFAKRKFMN 895 S++E E++R YL+Q+R+ET RL + + P+KWW F KR+FMN Sbjct: 121 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
>O15145:ARPC3_HUMAN Actin-related protein 2/3 complex subunit 3 - Homo sapiens (Human)| Length = 178 Score = 132 bits (331), Expect = 3e-30 Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 2/170 (1%) Frame = +2 Query: 392 YHSSFIDDDGITKACG-CPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHV 568 YHSS +D D TK G LLP+++ KGPAP D DI+DEAI +F+ANVFFKN+ + Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 60 Query: 569 KSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXXXXXXXXXXXXXXXX 748 K+ AD+ LIY+T YI+ LK+L+ C + + G K + LG+ Sbjct: 61 KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 120 Query: 749 QSQEEAELLRNYLKQIREETSGRLLNCAY-RANGTPNKWWLAFAKRKFMN 895 +++E E++R YL+Q+R+ET RL + N P+KWW F KR+FMN Sbjct: 121 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
>Q3T035:ARPC3_BOVIN Actin-related protein 2/3 complex subunit 3 - Bos taurus (Bovine)| Length = 178 Score = 132 bits (331), Expect = 3e-30 Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 2/170 (1%) Frame = +2 Query: 392 YHSSFIDDDGITKACG-CPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHV 568 YHSS +D D TK G LLP+++ KGPAP D DI+DEAI +F+ANVFFKN+ + Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 60 Query: 569 KSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXXXXXXXXXXXXXXXX 748 K+ AD+ LIY+T YI+ LK+L+ C + + G K + LG+ Sbjct: 61 KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 120 Query: 749 QSQEEAELLRNYLKQIREETSGRLLNCAY-RANGTPNKWWLAFAKRKFMN 895 +++E E++R YL+Q+R+ET RL + N P+KWW F KR+FMN Sbjct: 121 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
>O96624:ARPC3_DICDI Actin-related protein 2/3 complex subunit 3 - Dictyostelium| discoideum (Slime mold) Length = 174 Score = 117 bits (292), Expect = 1e-25 Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 2/172 (1%) Frame = +2 Query: 386 MVYHSSFIDDDGITKACG-CPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNF 562 MVYHS F D+ + G P+LPLKT KGPAP D++ DIIDEA+ F+AN+ F+NF Sbjct: 1 MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNF 60 Query: 563 HVKSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXXXXXXXXXXXXXX 742 V+ D++LIYLT YI L ++ A KA+ + E+ Sbjct: 61 EVQGNGDRVLIYLTLYITKCLLKIAPMNK-ADAEKALFLIAQEQFSIPGESAFPLGGLVT 119 Query: 743 XXQSQEEAELLRNYLKQIREETSGRLLNCAYRAN-GTPNKWWLAFAKRKFMN 895 +++ A+ LR Y Q+R E RL Y + NKWW+ F+KRKF+N Sbjct: 120 VPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171
>Q9Y7J4:ARPC3_SCHPO ARP2/3 complex 21 kDa subunit - Schizosaccharomyces pombe (Fission| yeast) Length = 174 Score = 115 bits (289), Expect = 2e-25 Identities = 65/169 (38%), Positives = 90/169 (53%), Gaps = 1/169 (0%) Frame = +2 Query: 392 YHSSFIDDDGITKACGCPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHVK 571 YHSSF+ + +LPLKT +GPA +D + DIIDE I FRAN FF+NF +K Sbjct: 4 YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIK 63 Query: 572 SPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEKXXXXXXXXXXXXXXXXXXQ 751 PAD+ LIY T +I+ L R+ + + +L LE Sbjct: 64 GPADRTLIYGTLFISECLGRVNGL-NYRDAERQLNSLALENFSIPGSAGFPLNALYAPPL 122 Query: 752 SQEEAELLRNYLKQIREETSGRLLNCAYRA-NGTPNKWWLAFAKRKFMN 895 S ++AE++R YL Q R+E + RLL+ Y P+KWW F+KR+FMN Sbjct: 123 SPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMN 171
>Q05933:ARPC3_YEAST ARP2/3 complex 21 kDa subunit - Saccharomyces cerevisiae (Baker's| yeast) Length = 178 Score = 110 bits (276), Expect = 8e-24 Identities = 67/173 (38%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Frame = +2 Query: 392 YHSSFIDDDGITKACG-CPLLPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHV 568 YHS+F D + G LLPL T +GPA S+SD DIIDE + FRAN FFKNF + Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSDY-DIIDECLDLFRANSFFKNFEI 62 Query: 569 KSPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLEK-XXXXXXXXXXXXXXXXX 745 KSPAD++LIY +IN L L+ + K + N+ L+ Sbjct: 63 KSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVP 122 Query: 746 XQSQEEAELLRNYLKQIREETSGRLLNCAYRANGT---PNKWWLAFAKRKFMN 895 Q +LL+ Y++Q R+E + RLL Y + + P+K+WLAF +R+FMN Sbjct: 123 VQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSKEYPSKFWLAFTRRRFMN 175
>Q9XWV3:ARPC3_CAEEL Probable actin-related protein 2/3 complex subunit 3 -| Caenorhabditis elegans Length = 183 Score = 108 bits (270), Expect = 4e-23 Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Frame = +2 Query: 449 LPLKTHIKGPAPASDSDKADIIDEAITFFRANVFFKNFHVKSPADKLLIYLTSYINIALK 628 LP++T+ KGPAP ++ D DIIDEA+T+F+ N+FF+ F +K PAD+ +IYL YI L+ Sbjct: 25 LPIRTNFKGPAPQTNQD--DIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLR 82 Query: 629 RLETCRTLAVGTKAIINLGLEK-XXXXXXXXXXXXXXXXXXQSQEEAELLRNYLKQIREE 805 +L+ G K + L L QS+ + + +R YL+QIR+E Sbjct: 83 KLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQE 142 Query: 806 TSGRLLNCAY-RANGTPNKWWLAFAKRKFMN 895 RL + A+ P+KWWL FA+R+FM+ Sbjct: 143 IGARLCDLAFPDPQDRPSKWWLCFARRRFMD 173
>O15604:ARPC3_ENTHI Probable actin-related protein 2/3 complex subunit 3 - Entamoeba| histolytica Length = 128 Score = 62.0 bits (149), Expect = 4e-09 Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Frame = +2 Query: 392 YHSSFIDDDGITKACGCPLLPLKTHIK-GPAPASDSDKADIIDEAITFFRANVFFKNFHV 568 YHS +D D + KA PL+ KT +K P D DI+DEAIT+++ANVF+KN + Sbjct: 9 YHSE-LDKDIVQKAGNFPLMQFKTKVKVNPKFLLKGDDMDIVDEAITYYKANVFYKNLDM 67 Query: 569 K-SPADKLLIYLTSYINIALKRLETCRTLAVGTKAIINLGLE 691 ADKLL YL Y+ L T RT K +L +E Sbjct: 68 SICEADKLLAYLMFYLQSLLLTF-TGRTKVDCDKMAFSLAIE 108
>Q9Y238:DLEC1_HUMAN Deleted in lung and esophageal cancer protein 1 - Homo sapiens| (Human) Length = 1755 Score = 32.0 bits (71), Expect = 4.7 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 871 SQPPFVWSAISSVSAVEQPPACFLPYLLQIVP 776 S PP + AI++V VEQPP LP + ++ P Sbjct: 517 SWPPLSFKAIATVGFVEQPPFGILPSVFELAP 548 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 176,539,564 Number of extensions: 3745104 Number of successful extensions: 8595 Number of sequences better than 10.0: 9 Number of HSP's gapped: 8575 Number of HSP's successfully gapped: 9 Length of query: 372 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 257 Effective length of database: 69,142,514 Effective search space: 17769626098 Effective search space used: 17769626098 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
