ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56p17 |
|---|---|
| Clone Library Name | barley_pub |
>Q8QG78:NCOR1_XENLA Nuclear receptor corepressor 1 - Xenopus laevis (African clawed| frog) Length = 2498 Score = 39.7 bits (91), Expect = 0.060 Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 5/152 (3%) Frame = +1 Query: 370 HRRSNSDLDKMCGKDALYASDKTFVQPKQVEGVQAKVK-----SDLSKEAQPARGAQSSL 534 H S+ D+ G D Y S + + E +++K SD PA Sbjct: 70 HPVSDRPQDRRSGYDQQYHS----ISQNEHEALESKRPRLDQVSDSHYRLNPAMVLLVPT 125 Query: 535 RKEILQLEKHLKDQQGVRGALEKALGPDAAPVNNLLHENPMPKAANELIREIATLELEVK 714 +E ++++ +K +QG+ E + P + + +P + ELI+ + ++ E+ Sbjct: 126 IQEGVRVQSEVKKEQGLSSKHESSSSPLSGQPGDDQDASPSKLSKEELIQSMDRVDREIA 185 Query: 715 NMEQYLLTLYRQAFEQQAPALSPPDRREALKP 810 +EQ +L L ++ + + A PP+ + + P Sbjct: 186 KVEQQILKLKKKQQQLEEEAAKPPEPEKPVSP 217
>Q9H7T3:CJ095_HUMAN Uncharacterized protein C10orf95 - Homo sapiens (Human)| Length = 257 Score = 27.3 bits (59), Expect(3) = 0.31 Identities = 14/38 (36%), Positives = 15/38 (39%) Frame = +2 Query: 857 PGFRAEAMPCSGPATRPHRRPVRNGMIR*RIARHPRAW 970 P R PC+GPA P R R R PR W Sbjct: 122 PALRPTPRPCAGPAPPPASRDCR--------CRRPRRW 151 Score = 25.8 bits (55), Expect(3) = 0.31 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 12/104 (11%) Frame = +3 Query: 519 STKLPEKRDSSTRKAP-QGSAGRAWRPGESSGARRRSGQ-----QPLARESNAKGRQRAD 680 S P K S P +AGR RP +SG RRRS PL ++ A Sbjct: 31 SAGAPSKNSSRLGGRPCMCTAGR--RPNRASGRRRRSCSPAPTWPPLCCYPQSRPTASAA 88 Query: 681 PGDRHAGAGGQEHG------AVPAHPVPAGVRAAGACIVPP*SP 794 A G+ HG A P HP P R G + P P Sbjct: 89 GPGACMRASGRPHGNTTASTAPPRHPRPR--RPGGPALRPTPRP 130 Score = 21.6 bits (44), Expect(3) = 0.31 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +1 Query: 1000 CQSALSCRGICSSRISPS 1053 C SC G C +R +P+ Sbjct: 181 CSYRTSCAGSCGARTAPT 198
>P66875:METB_MYCTU Cystathionine gamma-synthase - Mycobacterium tuberculosis| Length = 388 Score = 37.0 bits (84), Expect = 0.39 Identities = 32/152 (21%), Positives = 66/152 (43%) Frame = +1 Query: 157 GAYCRPARSHTALGGLELLVCRCWVGSFSSLPASEL*PPTPILGRCREMEVEAHEKKGHR 336 GA P ++ + GL+ LV R S ++ +E P + + +H GH Sbjct: 240 GAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHP--GHE 297 Query: 337 AFAKAIKSLGSHRRSNSDLDKMCGKDALYASDKTFVQPKQVEGVQAKVKSDLSKEAQPAR 516 A+ ++ G + +D L A + F+ + + GV++ ++ + Sbjct: 298 IAARQMRGFGGMVSVRMRAGRRAAQD-LCAKTRVFILAESLGGVESLIEHPSAMTHASTA 356 Query: 517 GAQSSLRKEILQLEKHLKDQQGVRGALEKALG 612 G+Q + ++++L ++D + G LE+ALG Sbjct: 357 GSQLEVPDDLVRLSVGIEDIADLLGDLEQALG 388
>P66876:METB_MYCBO Cystathionine gamma-synthase - Mycobacterium bovis| Length = 388 Score = 37.0 bits (84), Expect = 0.39 Identities = 32/152 (21%), Positives = 66/152 (43%) Frame = +1 Query: 157 GAYCRPARSHTALGGLELLVCRCWVGSFSSLPASEL*PPTPILGRCREMEVEAHEKKGHR 336 GA P ++ + GL+ LV R S ++ +E P + + +H GH Sbjct: 240 GAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHP--GHE 297 Query: 337 AFAKAIKSLGSHRRSNSDLDKMCGKDALYASDKTFVQPKQVEGVQAKVKSDLSKEAQPAR 516 A+ ++ G + +D L A + F+ + + GV++ ++ + Sbjct: 298 IAARQMRGFGGMVSVRMRAGRRAAQD-LCAKTRVFILAESLGGVESLIEHPSAMTHASTA 356 Query: 517 GAQSSLRKEILQLEKHLKDQQGVRGALEKALG 612 G+Q + ++++L ++D + G LE+ALG Sbjct: 357 GSQLEVPDDLVRLSVGIEDIADLLGDLEQALG 388
>Q4KKX4:NCOR1_XENTR Nuclear receptor corepressor 1 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 2494 Score = 36.2 bits (82), Expect = 0.66 Identities = 19/91 (20%), Positives = 44/91 (48%) Frame = +1 Query: 538 KEILQLEKHLKDQQGVRGALEKALGPDAAPVNNLLHENPMPKAANELIREIATLELEVKN 717 +E ++++ +K +QG+ E P + +P + ELI+ + ++ E+ Sbjct: 127 QEGVRVQSEVKKEQGLPSKHETTSSPLSGQPGEEQEASPSKLSKEELIQSMDRVDREIAK 186 Query: 718 MEQYLLTLYRQAFEQQAPALSPPDRREALKP 810 +EQ +L L ++ + + A PP+ + + P Sbjct: 187 VEQQILKLKKKQQQLEEEAAKPPEPEKPVSP 217
>P52734:FGD1_MOUSE FYVE, RhoGEF and PH domain-containing protein 1 - Mus musculus| (Mouse) Length = 960 Score = 35.0 bits (79), Expect = 1.5 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +3 Query: 2070 HGPAVP----PGEPEDGDAEVPAAGRQVQQDHRVGALQPQLPVSDCQGPRVSSP 2219 HG VP P +PE A P A D GAL+P LPVS G + P Sbjct: 2 HGHRVPGGPGPSDPERSAANTPGAAPLACADSDPGALEPGLPVSRGSGTALGGP 55
>Q8ZA10:HUTH_YERPE Histidine ammonia-lyase - Yersinia pestis| Length = 510 Score = 35.0 bits (79), Expect = 1.5 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 6/142 (4%) Frame = +1 Query: 871 RGDAVLRSSYXXXXXSRKKWNDPLTDCSTSACLDRPNDYDALRCQSALSCRGICSSRISP 1050 RG S+Y R + ++ +C D+ D +LRCQ + G C +I Sbjct: 248 RGQIDAASTYRHLLGERSEISESHKNC------DKVQDPYSLRCQPQVM--GACLGQIRQ 299 Query: 1051 SEESLARALRSCHSQPFSFLEEGDAAAAG------VISLAEYLGTNVADHIPETPNNLSE 1212 + E LA + P F E+GD + G V A+ L +A+ +LSE Sbjct: 300 AAEVLAIESNAVSDNPLVFAEQGDVLSGGNFHAEPVAMAADNLALALAE-----VGSLSE 354 Query: 1213 EMVRCMAGVYCKLADPPLVHHG 1278 + M + P LV +G Sbjct: 355 CRISLMMDKHMSQLPPFLVENG 376
>P12752:Y24K_STRGR Hypothetical 24.7 kDa protein in photolyase 5'region - Streptomyces| griseus Length = 238 Score = 34.7 bits (78), Expect = 1.9 Identities = 28/85 (32%), Positives = 37/85 (43%) Frame = +3 Query: 516 RSTKLPEKRDSSTRKAPQGSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRH 695 R+ + +R S R P GSA + RP +S A G+ S R+ P D H Sbjct: 19 RTARPAPRRCGSCRPPPPGSASPSPRPRRASCATGCCGR------SRPYARRLRRPADGH 72 Query: 696 AGAGGQEHGAVPAHPVPAGVRAAGA 770 AGG G A+ + A V AA A Sbjct: 73 GPAGGGRTGRWYAYALAACVAAAAA 97
>Q664B8:HUTH_YERPS Histidine ammonia-lyase - Yersinia pseudotuberculosis| Length = 510 Score = 34.7 bits (78), Expect = 1.9 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 6/142 (4%) Frame = +1 Query: 871 RGDAVLRSSYXXXXXSRKKWNDPLTDCSTSACLDRPNDYDALRCQSALSCRGICSSRISP 1050 RG S+Y R + ++ +C D+ D +LRCQ + G C +I Sbjct: 248 RGQIDAASTYRHLLGERSEISESHKNC------DKVQDPYSLRCQPQVM--GACLGQIRQ 299 Query: 1051 SEESLARALRSCHSQPFSFLEEGDAAAAG------VISLAEYLGTNVADHIPETPNNLSE 1212 + E LA + P F E+GD + G V A+ L +A+ +LSE Sbjct: 300 AAEVLAIESNAVSDNPLVFAEQGDVLSGGNFHAEPVAMAADNLALALAE-----IGSLSE 354 Query: 1213 EMVRCMAGVYCKLADPPLVHHG 1278 + M + P LV +G Sbjct: 355 CRISLMMDKHMSQLPPFLVENG 376
>O97159:CHDM_DROME Chromodomain helicase-DNA-binding protein Mi-2 homolog - Drosophila| melanogaster (Fruit fly) Length = 1982 Score = 34.3 bits (77), Expect = 2.5 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 4/110 (3%) Frame = -2 Query: 356 LIALAKARWPFFSCASTSISRHLPRIGVGGQSSEA----GREEKEPTQQRQTRSSKPPSA 189 L+ L A+W F ++ I + G GG + +A G E +EP R +R+ K Sbjct: 174 LVMLVAAKWREFCESNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRSSRSSRNEK---- 229 Query: 188 VWLLAGRQ*APNDLYPPPPLSLAVLRSTTKQQPFWRGSGRGEQAIRQAGK 39 P+D+Y + +++P + SGRG++ R +GK Sbjct: 230 ----------PDDIY-EEAVEEEEEEEEEEKKPRRKRSGRGKKGRRPSGK 268
>O35085:ARX_MOUSE Homeobox protein ARX - Mus musculus (Mouse)| Length = 564 Score = 34.3 bits (77), Expect = 2.5 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Frame = +3 Query: 1968 PGNGRRVEGAEDIAAEARRGVCQGRQALVAGPCRHGPAVP-----PGEPEDGDAEVPAAG 2132 PG GR ++GA AA A AGP P P PGE +D V AA Sbjct: 91 PGGGRLLQGAAAAAAAAAAAAAAATATGTAGPRGEVPPPPPPAARPGERQDSAGAVAAAA 150 Query: 2133 RQVQQDHRVGALQPQLPVS 2189 D + PQ+ +S Sbjct: 151 AAAAWDTLKISQAPQVSIS 169
>P12624:MARCS_BOVIN Myristoylated alanine-rich C-kinase substrate - Bos taurus (Bovine)| Length = 333 Score = 33.9 bits (76), Expect = 3.3 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Frame = +3 Query: 1971 GNGRRVEGAEDIAAEARRGVCQGRQALVAGPCRHGPAVP---PGEPEDGDAEVPAAGRQV 2141 G G EGA +AE + G A AG P P PGE E A G Sbjct: 178 GEGGEAEGAAGASAEGGKDEASGGAAAAAGEAGAAPGEPTAAPGEEAAAGEEGAAGGDPQ 237 Query: 2142 QQDHRVGALQPQLPVSDCQGPRVSSP 2219 + A+ P+ P + + V P Sbjct: 238 EAKPEEAAVAPEKPPASEEAKAVEEP 263
>Q8N350:DOS_HUMAN Protein Dos - Homo sapiens (Human)| Length = 725 Score = 33.9 bits (76), Expect = 3.3 Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Frame = +3 Query: 606 SGARRRSGQQPLARESNAKGRQRADPGDRHAG--AGGQEHGAVPAHPVPAGVRAAGACIV 779 + AR R+ P AR+ +GRQ +DPG R A AG A A P A +R + Sbjct: 585 AAARHRARAHPHARKQWQRGRQHSDPGARAAPALAGTPAPPAGAARPARAPLRRGDSVDG 644 Query: 780 PP--*SPGGXXXXXXXXXXXXXPGHTRCQG 863 PP + GG PG C G Sbjct: 645 PPDGRTLGGAGDDPAIPVIEEEPGGGGCPG 674
>O92446:VP91_NPVBM Capsid-associated protein Vp91 precursor - Bombyx mori nuclear| polyhedrosis virus (BmNPV) Length = 839 Score = 33.5 bits (75), Expect = 4.3 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +3 Query: 1596 HTQRTADACLSQVWRPTEQSEEVINTCQGRLQNRGTQHQCSPD 1724 HT TAD +Q ++ +E + TC R++N Q++CS D Sbjct: 287 HTYITADISDAQYFKCLNNNESQLMTCINRIRNSDNQYECSGD 329
>P33485:VNUA_PRVKA Probable nuclear antigen - Pseudorabies virus (strain Kaplan) (PRV)| Length = 1733 Score = 33.5 bits (75), Expect = 4.3 Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 17/96 (17%) Frame = +3 Query: 1911 GVHPKEAFPAAGGCQGGVHPGNGRR------------VEGAEDIAAEARR---GVCQGRQ 2045 G+H A G +GG P +GRR G + + RR G GRQ Sbjct: 451 GLHGAPGGGADAGLEGGKVPEHGRRGARGGDGARGQHQRGGLGVGLQQRRGAEGAQLGRQ 510 Query: 2046 ALVAGPCRHGPAVPPGE--PEDGDAEVPAAGRQVQQ 2147 AL A PA E P+ G AE PA GR V + Sbjct: 511 ALGAAELGEAPAAAGDEDGPQRG-AEPPAVGRAVPE 545
>Q8FPA7:IF2_COREF Translation initiation factor IF-2 - Corynebacterium efficiens| Length = 964 Score = 33.5 bits (75), Expect = 4.3 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Frame = +3 Query: 573 SAGRAWRPGE---SSGARRRSGQQPLARESNAKGRQRADPGDRHAGAGGQEHGAVPAHPV 743 S G A RPG G R G +P G++ P D G GQ G P Sbjct: 192 STGAADRPGPRPGGGGPRPGGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPGPGSGGPR 251 Query: 744 PAGVRAAGA 770 P G AAGA Sbjct: 252 PQGGNAAGA 260
>Q5VT25:MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha - Homo sapiens (Human)| Length = 1732 Score = 33.5 bits (75), Expect = 4.3 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 4/131 (3%) Frame = +1 Query: 460 EGVQAKVKSDLSKEAQPARGAQSSLRKEIL----QLEKHLKDQQGVRGALEKALGPDAAP 627 EG+ A +L KE + G Q +L KEI+ +LEK ++ Q R E Sbjct: 708 EGIHANEIKNLKKELHDSEGQQLALNKEIMILKDKLEKTRRESQSEREEFESEFKQQYER 767 Query: 628 VNNLLHENPMPKAANELIREIATLELEVKNMEQYLLTLYRQAFEQQAPALSPPDRREALK 807 LL E +L E+ L +N L+++ Q E++ L+ D++E++ Sbjct: 768 EKVLLTEE-----NKKLTSELDKLTTLYEN-----LSIHNQQLEEEVKDLA--DKKESV- 814 Query: 808 PSVSARWSGQL 840 A W Q+ Sbjct: 815 ----AHWEAQI 821
>P22091:TAL1_MOUSE T-cell acute lymphocytic leukemia-1 protein homolog - Mus musculus| (Mouse) Length = 329 Score = 33.1 bits (74), Expect = 5.6 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Frame = +3 Query: 1938 AAGGCQGGVHPGNG--RRVEGAEDIAAEARRGVCQGRQALVAGPCRHGPAVPPGEPEDGD 2111 A G GG G G R ++G + +AAEAR V GP P P Sbjct: 56 ARSGAGGGPASGGGAARDLKGRDAVAAEARLRVPTTELCRPPGPA------PAPAPASAP 109 Query: 2112 AEVPAAGRQVQ 2144 AE+P GR VQ Sbjct: 110 AELPGDGRMVQ 120
>Q5AW75:JHD1_EMENI JmjC domain-containing histone demethylation protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 1407 Score = 33.1 bits (74), Expect = 5.6 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 15/96 (15%) Frame = +3 Query: 516 RSTKLPEKRDSSTRKAPQGSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADP---- 683 ++ K +TR++ GS+GR PG SSG+ ++SG +P S++ G++ P Sbjct: 1298 KTAKSTTTTPQTTRRSSFGSSGRKTTPGLSSGS-KKSGSRP----SSSHGKKSLSPSVEK 1352 Query: 684 -GDRHA---------GAGGQ-EHGAVPAHPVPAGVR 758 +RHA G G + EHG P +R Sbjct: 1353 KAERHAISSAPFGQHGRGSKSEHGTSDVDPDAESLR 1388
>Q8IX07:FOG1_HUMAN Zinc finger protein ZFPM1 - Homo sapiens (Human)| Length = 1004 Score = 33.1 bits (74), Expect = 5.6 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 18/97 (18%) Frame = +3 Query: 1941 AGGCQGGVHPGNGRRVEGAEDIAAEA-----------RRGVCQGRQALVAGPCRH----- 2072 AGG Q G+ PG + GA E +R C GR+A P Sbjct: 560 AGGAQTGLFPGAPK---GATCFECEITFSNVNNYYVHKRLYCSGRRAPEDAPAARRPKAP 616 Query: 2073 -GPA-VPPGEPEDGDAEVPAAGRQVQQDHRVGALQPQ 2177 GPA PPG+P + DA + G +++ GA P+ Sbjct: 617 PGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPE 653
>Q00123:VG24_ICHV1 Uncharacterized gene 24 protein - Ictalurid herpesvirus 1 (IcHV-1)| (Channel catfish herpesvirus) Length = 333 Score = 33.1 bits (74), Expect = 5.6 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = +1 Query: 490 LSKEAQPARGAQSSLRKEILQLEKHLKDQQGVRGALEKALGPDAAPVNNL--LHENPMPK 663 +S+E A+ + LR+E+ L L Q ALE+ LG A ++ L L ++P Sbjct: 17 ISRELTLAKRERDELRREVETLNLELSAQVDKNRALEETLGTRDAEISRLSKLVDSPRDS 76 Query: 664 AANELIREIATLELEVKNMEQYL 732 I + TL VK +E L Sbjct: 77 LIRMYITKNQTLAQRVKTLEHRL 99
>P02454:CO1A1_RAT Collagen alpha-1(I) chain precursor - Rattus norvegicus (Rat)| Length = 1453 Score = 32.7 bits (73), Expect = 7.3 Identities = 32/119 (26%), Positives = 39/119 (32%), Gaps = 2/119 (1%) Frame = +3 Query: 570 GSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRHAGAGGQEHGAVPAHPVPA 749 G+AGR PG S A P+ +E R P R G P P PA Sbjct: 867 GAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVG------PPGPPGPA 920 Query: 750 GVRAAGACIVPP*SPG--GXXXXXXXXXXXXXPGHTRCQGFEQRRCRAPVQLPAPTAVP 920 G + + P SPG G PG +GF LP P+ P Sbjct: 921 GEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGKRGFP--------GLPGPSGEP 971
>Q3UU96:MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha - Mus musculus (Mouse)| Length = 1719 Score = 32.7 bits (73), Expect = 7.3 Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 4/131 (3%) Frame = +1 Query: 460 EGVQAKVKSDLSKEAQPARGAQSSLRKEIL----QLEKHLKDQQGVRGALEKALGPDAAP 627 EG+ A +L KE + G Q +L KEIL +LEK ++ Q R E Sbjct: 708 EGIHASEIKNLKKELHDSEGQQLALNKEILVLKDKLEKTRRESQSEREEFENEFKQQYER 767 Query: 628 VNNLLHENPMPKAANELIREIATLELEVKNMEQYLLTLYRQAFEQQAPALSPPDRREALK 807 LL E + T EL+ L+L Q E++ L+ D++E++ Sbjct: 768 EKVLLTEE----------NKKLTSELDKLTSLYESLSLRNQHLEEEVKDLA--DKKESV- 814 Query: 808 PSVSARWSGQL 840 A W Q+ Sbjct: 815 ----AHWEAQI 821
>Q06670:VP91_NPVAC Capsid-associated protein Vp91 precursor - Autographa californica| nuclear polyhedrosis virus (AcMNPV) Length = 847 Score = 32.3 bits (72), Expect = 9.5 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +3 Query: 1596 HTQRTADACLSQVWRPTEQSEEVINTCQGRLQNRGTQHQCSPD 1724 HT TAD +Q ++ +E + TC R++N Q++CS D Sbjct: 287 HTYITADIGDTQYFKCLNNNESQLITCINRIRNSDNQYECSGD 329
>P66028:RHO_MYCTU Transcription termination factor rho - Mycobacterium tuberculosis| Length = 602 Score = 32.3 bits (72), Expect = 9.5 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +3 Query: 531 PEKRDSSTRKAPQGSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRHAGAGG 710 PE+R ++ P GS RA + + R+ GQQ E GD+ A G Sbjct: 122 PERRSATREAGPSGSGERAGTAADDTD-NRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180 Query: 711 QEHG 722 Q G Sbjct: 181 QARG 184
>P66029:RHO_MYCBO Transcription termination factor rho - Mycobacterium bovis| Length = 602 Score = 32.3 bits (72), Expect = 9.5 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +3 Query: 531 PEKRDSSTRKAPQGSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRHAGAGG 710 PE+R ++ P GS RA + + R+ GQQ E GD+ A G Sbjct: 122 PERRSATREAGPSGSGERAGTAADDTD-NRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180 Query: 711 QEHG 722 Q G Sbjct: 181 QARG 184
>Q7NY13:IF2_CHRVO Translation initiation factor IF-2 - Chromobacterium violaceum| Length = 964 Score = 32.3 bits (72), Expect = 9.5 Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 6/93 (6%) Frame = +3 Query: 534 EKRD------SSTRKAPQGSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRH 695 E+RD S + P+G+ R RP + R G + +G + A GDR Sbjct: 229 ERRDDRRGAPSGDNRGPRGNDNRGPRPAGAGDRGPRPG-------GDNRGPRPAGAGDRG 281 Query: 696 AGAGGQEHGAVPAHPVPAGVRAAGACIVPP*SP 794 GG G PA G R A A P P Sbjct: 282 PRPGGDNRGPRPAGAGDRGPRPAPAAAAPSQPP 314
>P11087:CO1A1_MOUSE Collagen alpha-1(I) chain precursor - Mus musculus (Mouse)| Length = 1453 Score = 32.3 bits (72), Expect = 9.5 Identities = 32/119 (26%), Positives = 39/119 (32%), Gaps = 2/119 (1%) Frame = +3 Query: 570 GSAGRAWRPGESSGARRRSGQQPLARESNAKGRQRADPGDRHAGAGGQEHGAVPAHPVPA 749 G+AGR PG S A P+ +E R P R G P P PA Sbjct: 867 GAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVG------PPGPPGPA 920 Query: 750 GVRAAGACIVPP*SPG--GXXXXXXXXXXXXXPGHTRCQGFEQRRCRAPVQLPAPTAVP 920 G + + P SPG G PG +GF LP P+ P Sbjct: 921 GEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFP--------GLPGPSGEP 971
>P46591:HYR1_CANAL Hyphally-regulated protein precursor - Candida albicans (Yeast)| Length = 937 Score = 28.9 bits (63), Expect(2) = 9.5 Identities = 17/70 (24%), Positives = 32/70 (45%) Frame = -3 Query: 1096 AESGTNAEPSQGSPPRGIS*TNRCRGTTTQTGSGAHHSHSVYPSTRMSSNPSADHSISYG 917 + G+N ++GS S +N G+ +Q+GSG+ + SN ++ G Sbjct: 689 SNEGSNHGSNEGSGSGSGSGSNNGSGSGSQSGSGSGSQSGSESGSNSGSNEGSNPGAGNG 748 Query: 916 TAVGAGSWTG 887 + G+G +G Sbjct: 749 SNEGSGQGSG 758 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 906 GRVAGPEHGIASARNPGTG 850 G+ +GP +G S N G+G Sbjct: 766 GQGSGPNNGSGSGHNDGSG 784
>Q4IL82:INO80_GIBZE Putative DNA helicase INO80 - Gibberella zeae (Fusarium| graminearum) Length = 1904 Score = 32.3 bits (72), Expect = 9.6 Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 16/211 (7%) Frame = +1 Query: 241 SSLPASEL*PPTPILGRCREMEVEAHEKKGHRAFAKAIKSLGSHRRSNSDLDKMCGKDAL 420 SS PA + P+PI+ R E++ E ++ + + + + R +LD Sbjct: 367 SSEPAPKPKEPSPIIAREPEIKEEREPRRDRESKRDSREPKQTKRSLEPELD-------- 418 Query: 421 YASDKTFVQPKQVEGVQAKVKSDLSKEAQPA---RGAQSSLRKEILQLEKHLKDQQGVRG 591 T V+ K VE + + KE +PA RGA+ S + + + G R Sbjct: 419 ---HDTEVE-KDVE-TEPEPLPSREKEKEPAPKKRGARKSTKGRASDIRDAATPKNGRRL 473 Query: 592 ALEKALGPDAAPVNNLLHENPMPKA-ANELIREIATLELEVKN------MEQYLLTLYRQ 750 +++K P + P PK + E+ ++I E +++N +++ Y++ Sbjct: 474 SVKKESPTPRLPAKRQANGQPKPKTWSAEMEKKIQNAESDIENRAANLDADEFDEQQYKE 533 Query: 751 AFEQQAPALSPPD------RREALKPSVSAR 825 +++ +S D RR+AL ++S + Sbjct: 534 RAQKRRRVMSELDVEYGLSRRDALANTISKK 564
>P85001:CE290_DANRE Centrosomal protein Cep290 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 2439 Score = 32.3 bits (72), Expect = 9.6 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Frame = +1 Query: 475 KVKSDLSKEAQPARGAQSS-LRKEILQLEKHLKDQQGVRGALEKALGPDAAPVNNL-LHE 648 K++S+L + G LR EI QLE HL+ ++ LEK +G + L L Sbjct: 90 KLESELEMAQRVMGGGDKHFLRDEIRQLESHLERKEKEVTQLEKEMGKERKSNEELALRA 149 Query: 649 NPMPKAANELIREIATLELEVKNMEQYLLTLYRQAFEQQ 765 + +L REI L + + ++Q + YR+ EQ+ Sbjct: 150 EEAEEKNRKLKREIKQLTRKNEQLQQD-IEFYRKEAEQR 187 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 434,293,916 Number of extensions: 9880435 Number of successful extensions: 33933 Number of sequences better than 10.0: 31 Number of HSP's gapped: 33716 Number of HSP's successfully gapped: 34 Length of query: 819 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 697 Effective length of database: 67,222,449 Effective search space: 46854046953 Effective search space used: 46854046953 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
