ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56p17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057928.1| Oryza sativa (japonica cultivar-group) Os03g0769000 (Os03g0769000) mRNA, complete cds Length = 2004 Score = 1267 bits (639), Expect = 0.0 Identities = 1079/1226 (88%), Gaps = 6/1226 (0%) Strand = Plus / Plus Query: 994 ctccgctgccagtctgcgttgtcgtgccgcggcatctgttcgtctaggatatccccctcg 1053 ||||| |||||||||||| |||||| ||||||||| |||||||| ||||| || || ||| Sbjct: 778 ctccggtgccagtctgcggtgtcgtaccgcggcatttgttcgtccaggatttcaccatcg 837 Query: 1054 gaggagagccttgcgagggctctgcgttcgtgccactctcagcctttctcatttttggag 1113 ||||| || |||||||| ||||| || || ||||||||||| |||||||||||| ||||| Sbjct: 838 gaggacagtcttgcgagagctcttcggtcatgccactctcaacctttctcatttctggag 897 Query: 1114 gaaggcgatgctgcagcagcgggggtgatcagcttagcagagtatctgggcacaaatgta 1173 ||||| || | | ||||| || ||||| ||||||||||||||||| ||||| |||||| Sbjct: 898 gaaggagagagtactgcagcaggagtgataagcttagcagagtatctaggcactaatgta 957 Query: 1174 gctgaccatatccctgagactccaaacaatctttccgaggagatggtgagatgcatggca 1233 |||||||| || ||||| ||||| ||||| || || |||||||||||||||||||||||| Sbjct: 958 gctgaccacattcctgaaactcccaacaacctatcggaggagatggtgagatgcatggca 1017 Query: 1234 ggcgtgtactgcaaacttgcagatcctccgttggttcaccacggctcctcgtcttctccg 1293 || ||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 1018 ggggtgtactgcaaacttgcagatccccctttggttcaccacggctcgtcgtcttcgcca 1077 Query: 1294 acgtcatcgttctcctcaaccagcgcaatttctccgcagtatgtgggggacatgtggagt 1353 ||||||||||||||||| || || || || || ||||||||| ||||||| || |||||| Sbjct: 1078 acgtcatcgttctcctcgacgagtgcgatatccccgcagtatctgggggatatctggagt 1137 Query: 1354 cccaattacaagcgggagactacgctagactcccggttgataaacccattccatgtcgag 1413 |||||||||||| | || |||| || ||||| || ||||||||||| |||||||| ||| Sbjct: 1138 cccaattacaagagagaatctactctggactctcgtttgataaaccctttccatgttgag 1197 Query: 1414 gggttgaaggagttcagtggaccatacaatacaatggttgagattccagcgatttgccgc 1473 |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1198 gggttgaaggagttcagtggaccatacaatacaatggttgaggttccactgatttgccgc 1257 Query: 1474 gataatcggaggctaagagatgttgaggatcttctccaaacttacaagttgattttgtac 1533 |||| ||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1258 gatagtcggaggctaaaagaagttgaggatctgctccagacttacaagttgattttgtac 1317 Query: 1534 cggttggaaaccgttgatctgagaaggatgacaaacgaagagaagatcgcattttgggtc 1593 |||||||||||||| ||||| || || ||||| |||||||| ||||| ||||| |||||| Sbjct: 1318 cggttggaaaccgtcgatctcaggagaatgacgaacgaagaaaagattgcattctgggtc 1377 Query: 1594 aacatacacaacgcactgctgatgcatgcttatctcaggtatggcgtcccacagaacaat 1653 |||||||||||||| | |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1378 aacatacacaacgcccagctgatgcatgcttatctaaagtatggcgtcccacagaacaat 1437 Query: 1654 ctgaagaagtcatcaatacttgtcaaggccgcctgcaaaatcgcgggacgcaacatcaat 1713 ||||||||| ||||| | ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 1438 ctgaagaagacatcacttcttgttaaggctgcctgcaaaattgctggacggagcatcaat 1497 Query: 1714 gtagccctgatccagaacttggttcttggatgtaacacacattgtcctggacagtggcta 1773 ||||| | ||||||| | ||||||||||||| |||||| | ||||||||||||||| || Sbjct: 1498 gtagctgttatccagagcatggttcttggatgcaacacatactgtcctggacagtggtta 1557 Query: 1774 cgtactttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcatgagtggcaa 1833 |||||||||||| |||||||||| |||||||||| | |||||| |||||||| ||||||| Sbjct: 1558 cgtactttgcttcacccaaggatcaaaagcaaagtgggcaaagtagggcatgtgtggcaa 1617 Query: 1834 gcctttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcgggcagccat 1893 |||||||||||||| ||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 1618 gcctttgccgttgcacaatcagagcctcttttacgctttgcgctttgttcaggaagccat 1677 Query: 1894 tctgatcccgcggtgagggtgtacaccccaaagaggcttttccagcagctggaggctgcc 1953 ||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 1678 tctgatcccgcggtgagagtgtacactccaaagaggctgttccatcaactggaggctgcc 1737 Query: 1954 aaggaggagttcatccgggcaacggtcggcgtgtggagggagcagaagatattgctgccg 2013 |||||||||||||||||||||||||| ||| | |||| ||||||||| ||| |||| || Sbjct: 1738 aaggaggagttcatccgggcaacggtgggcatctggaaggagcagaaaatactgcttcca 1797 Query: 2014 aagctcgtcgaggcgtatgccaaggacgtcaagctctcgtcgcagggccttgtcgacatg 2073 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1798 aagctcgtcgaggcgtatgcgaaagacgtcaagctctcgtcgcagggccttgtcgacatg 1857 Query: 2074 gtccagcggtacctcccggagagcctgaggatggcgatgcagaggtgccagcagcagggc 2133 || ||||| ||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 1858 gtgcagcgctacctcccggagagcttgaggatggcaatgcagaagtgccagcag------ 1911 Query: 2134 ggcaggtccagcaagatcatcgagtgggtgccttacaacctcaacttccggtatctgatt 2193 |||| |||||||||||||| || ||||||||| | ||||| || |||||||||||| | Sbjct: 1912 agcagatccagcaagatcatagaatgggtgcctcataacctgaatttccggtatctgctg 1971 Query: 2194 gccagggacctcgcgtttcctcacct 2219 |||||||||| || ||||||||||| Sbjct: 1972 tccagggacctggcatttcctcacct 1997 Score = 135 bits (68), Expect = 8e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 508 cctgcgagaggagcacaaagctccctgagaaaagagattcttcaactagaaaagcacctc 567 |||| ||||||||| || |||| | |||||||||||||||| || ||||||||||||||| Sbjct: 268 cctgggagaggagcgcagagcttcttgagaaaagagattctccagctagaaaagcacctc 327 Query: 568 aaggatcagcagggcgtgcgtggcgccctggagaaagctctggg 611 ||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 328 aaggatcagcaggtcatgcgtggcgccctggagaaagctctggg 371 Score = 89.7 bits (45), Expect = 4e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 644 acgagaatccaatgccaaaggccgccaacgagctgatccgggagatcgccacgctggagc 703 ||||||||||||||||||||| ||||| || || ||| ||||||| || || || |||| Sbjct: 407 acgagaatccaatgccaaaggatgccaaagaacttatcagggagattgctacactagagc 466 Query: 704 tggaggtcaagaacatggagcagtacctgctcaccctgtaccggcaggcgttcgagcagc 763 | ||||| ||||||||||||||||| || || ||||||||| || |||| || ||||||| Sbjct: 467 ttgaggtgaagaacatggagcagtatctccttaccctgtacaggaaggcctttgagcagc 526 Query: 764 a 764 | Sbjct: 527 a 527 Score = 56.0 bits (28), Expect = 6e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 290 ggtgccgagaaatggaggtggaggcgcacgagaagaagggccaccgggccttcgccaagg 349 |||||| ||||||||||||||||||| ||||||||||| ||| | ||||| || |||| Sbjct: 44 ggtgccaagaaatggaggtggaggcgatggagaagaagggacacagagcctttgctaagg 103 Query: 350 caat 353 |||| Sbjct: 104 caat 107
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 424 bits (214), Expect = e-115 Identities = 349/394 (88%) Strand = Plus / Plus Query: 1129 gcagcgggggtgatcagcttagcagagtatctgggcacaaatgtagctgaccatatccct 1188 ||||| || ||||| ||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 68964 gcagcaggagtgataagcttagcagagtatctaggcactaatgtagctgaccacattcct 69023 Query: 1189 gagactccaaacaatctttccgaggagatggtgagatgcatggcaggcgtgtactgcaaa 1248 || ||||| ||||| || || |||||||||||||||||||||||||| |||||||||||| Sbjct: 69024 gaaactcccaacaacctatcggaggagatggtgagatgcatggcaggggtgtactgcaaa 69083 Query: 1249 cttgcagatcctccgttggttcaccacggctcctcgtcttctccgacgtcatcgttctcc 1308 ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 69084 cttgcagatccccctttggttcaccacggctcgtcgtcttcgccaacgtcatcgttctcc 69143 Query: 1309 tcaaccagcgcaatttctccgcagtatgtgggggacatgtggagtcccaattacaagcgg 1368 || || || || || || ||||||||| ||||||| || |||||||||||||||||| | Sbjct: 69144 tcgacgagtgcgatatccccgcagtatctgggggatatctggagtcccaattacaagaga 69203 Query: 1369 gagactacgctagactcccggttgataaacccattccatgtcgaggggttgaaggagttc 1428 || |||| || ||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 69204 gaatctactctggactctcgtttgataaaccctttccatgttgaggggttgaaggagttc 69263 Query: 1429 agtggaccatacaatacaatggttgagattccagcgatttgccgcgataatcggaggcta 1488 ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct: 69264 agtggaccatacaatacaatggttgaggttccactgatttgccgcgatagtcggaggcta 69323 Query: 1489 agagatgttgaggatcttctccaaacttacaagt 1522 | ||| ||||||||||| ||||| |||||||||| Sbjct: 69324 aaagaagttgaggatctgctccagacttacaagt 69357 Score = 317 bits (160), Expect = 1e-82 Identities = 276/315 (87%), Gaps = 6/315 (1%) Strand = Plus / Plus Query: 1905 ggtgagggtgtacaccccaaagaggcttttccagcagctggaggctgccaaggaggagtt 1964 |||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 70504 ggtgagagtgtacactccaaagaggctgttccatcaactggaggctgccaaggaggagtt 70563 Query: 1965 catccgggcaacggtcggcgtgtggagggagcagaagatattgctgccgaagctcgtcga 2024 ||||||||||||||| ||| | |||| ||||||||| ||| |||| || ||||||||||| Sbjct: 70564 catccgggcaacggtgggcatctggaaggagcagaaaatactgcttccaaagctcgtcga 70623 Query: 2025 ggcgtatgccaaggacgtcaagctctcgtcgcagggccttgtcgacatggtccagcggta 2084 ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 70624 ggcgtatgcgaaagacgtcaagctctcgtcgcagggccttgtcgacatggtgcagcgcta 70683 Query: 2085 cctcccggagagcctgaggatggcgatgcagaggtgccagcagcagggcggcaggtccag 2144 ||||||||||||| |||||||||| ||||||| |||||||||| |||| ||||| Sbjct: 70684 cctcccggagagcttgaggatggcaatgcagaagtgccagcag------agcagatccag 70737 Query: 2145 caagatcatcgagtgggtgccttacaacctcaacttccggtatctgattgccagggacct 2204 ||||||||| || ||||||||| | ||||| || |||||||||||| | |||||||||| Sbjct: 70738 caagatcatagaatgggtgcctcataacctgaatttccggtatctgctgtccagggacct 70797 Query: 2205 cgcgtttcctcacct 2219 || ||||||||||| Sbjct: 70798 ggcatttcctcacct 70812 Score = 188 bits (95), Expect = 7e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 1765 cagtggctacgtactttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcat 1824 |||||| |||||||||||||| |||||||||| |||||||||| | |||||| ||||||| Sbjct: 69990 cagtggttacgtactttgcttcacccaaggatcaaaagcaaagtgggcaaagtagggcat 70049 Query: 1825 gagtggcaagcctttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcg 1884 | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 70050 gtgtggcaagcctttgccgttgcacaatcagagcctcttttacgctttgcgctttgttca 70109 Query: 1885 ggcagccattctgatcccgcggt 1907 || |||||||||||||||||||| Sbjct: 70110 ggaagccattctgatcccgcggt 70132 Score = 121 bits (61), Expect = 1e-23 Identities = 91/101 (90%) Strand = Plus / Plus Query: 1521 gttgattttgtaccggttggaaaccgttgatctgagaaggatgacaaacgaagagaagat 1580 ||||||||||||||||||||||||||| ||||| || || ||||| |||||||| ||||| Sbjct: 69450 gttgattttgtaccggttggaaaccgtcgatctcaggagaatgacgaacgaagaaaagat 69509 Query: 1581 cgcattttgggtcaacatacacaacgcactgctgatgcatg 1621 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 69510 tgcattctgggtcaacatacacaacgcccagctgatgcatg 69550 Score = 113 bits (57), Expect = 3e-21 Identities = 105/121 (86%) Strand = Plus / Plus Query: 994 ctccgctgccagtctgcgttgtcgtgccgcggcatctgttcgtctaggatatccccctcg 1053 ||||| |||||||||||| |||||| ||||||||| |||||||| ||||| || || ||| Sbjct: 68658 ctccggtgccagtctgcggtgtcgtaccgcggcatttgttcgtccaggatttcaccatcg 68717 Query: 1054 gaggagagccttgcgagggctctgcgttcgtgccactctcagcctttctcatttttggag 1113 ||||| || |||||||| ||||| || || ||||||||||| |||||||||||| ||||| Sbjct: 68718 gaggacagtcttgcgagagctcttcggtcatgccactctcaacctttctcatttctggag 68777 Query: 1114 g 1114 | Sbjct: 68778 g 68778 Score = 107 bits (54), Expect = 2e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 542 agattcttcaactagaaaagcacctcaaggatcagcagggcgtgcgtggcgccctggaga 601 ||||||| || |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 68078 agattctccagctagaaaagcacctcaaggatcagcaggtcatgcgtggcgccctggaga 68137 Query: 602 aagctctggg 611 |||||||||| Sbjct: 68138 aagctctggg 68147 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1621 gcttatctcaggtatggcgtcccacagaacaatctgaagaagtcatcaatacttgtcaag 1680 |||||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| Sbjct: 69643 gcttatctaaagtatggcgtcccacagaacaatctgaagaagacatcacttcttgttaag 69702 Query: 1681 g 1681 | Sbjct: 69703 g 69703 Score = 73.8 bits (37), Expect = 3e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1679 aggccgcctgcaaaatcgcgggacgcaacatcaatgtagccctgatccagaacttggttc 1738 |||| ||||||||||| || ||||| | |||||||||||| | ||||||| | |||||| Sbjct: 69795 aggctgcctgcaaaattgctggacggagcatcaatgtagctgttatccagagcatggttc 69854 Query: 1739 ttggatgtaacacacattgtcctggacag 1767 ||||||| |||||| | |||||||||||| Sbjct: 69855 ttggatgcaacacatactgtcctggacag 69883 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 683 gggagatcgccacgctggagctggaggtcaagaacatggagcagtacctgctcaccctgt 742 ||||||| || || || ||||| ||||| ||||||||||||||||| || || ||||||| Sbjct: 68326 gggagattgctacactagagcttgaggtgaagaacatggagcagtatctccttaccctgt 68385 Query: 743 accggcaggcgttcgagcagca 764 || || |||| || |||||||| Sbjct: 68386 acaggaaggcctttgagcagca 68407 Score = 56.0 bits (28), Expect = 6e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 290 ggtgccgagaaatggaggtggaggcgcacgagaagaagggccaccgggccttcgccaagg 349 |||||| ||||||||||||||||||| ||||||||||| ||| | ||||| || |||| Sbjct: 67240 ggtgccaagaaatggaggtggaggcgatggagaagaagggacacagagcctttgctaagg 67299 Query: 350 caat 353 |||| Sbjct: 67300 caat 67303 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 acgagaatccaatgccaaagg 664 ||||||||||||||||||||| Sbjct: 68183 acgagaatccaatgccaaagg 68203
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 424 bits (214), Expect = e-115 Identities = 349/394 (88%) Strand = Plus / Minus Query: 1129 gcagcgggggtgatcagcttagcagagtatctgggcacaaatgtagctgaccatatccct 1188 ||||| || ||||| ||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 31614148 gcagcaggagtgataagcttagcagagtatctaggcactaatgtagctgaccacattcct 31614089 Query: 1189 gagactccaaacaatctttccgaggagatggtgagatgcatggcaggcgtgtactgcaaa 1248 || ||||| ||||| || || |||||||||||||||||||||||||| |||||||||||| Sbjct: 31614088 gaaactcccaacaacctatcggaggagatggtgagatgcatggcaggggtgtactgcaaa 31614029 Query: 1249 cttgcagatcctccgttggttcaccacggctcctcgtcttctccgacgtcatcgttctcc 1308 ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 31614028 cttgcagatccccctttggttcaccacggctcgtcgtcttcgccaacgtcatcgttctcc 31613969 Query: 1309 tcaaccagcgcaatttctccgcagtatgtgggggacatgtggagtcccaattacaagcgg 1368 || || || || || || ||||||||| ||||||| || |||||||||||||||||| | Sbjct: 31613968 tcgacgagtgcgatatccccgcagtatctgggggatatctggagtcccaattacaagaga 31613909 Query: 1369 gagactacgctagactcccggttgataaacccattccatgtcgaggggttgaaggagttc 1428 || |||| || ||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 31613908 gaatctactctggactctcgtttgataaaccctttccatgttgaggggttgaaggagttc 31613849 Query: 1429 agtggaccatacaatacaatggttgagattccagcgatttgccgcgataatcggaggcta 1488 ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct: 31613848 agtggaccatacaatacaatggttgaggttccactgatttgccgcgatagtcggaggcta 31613789 Query: 1489 agagatgttgaggatcttctccaaacttacaagt 1522 | ||| ||||||||||| ||||| |||||||||| Sbjct: 31613788 aaagaagttgaggatctgctccagacttacaagt 31613755 Score = 317 bits (160), Expect = 1e-82 Identities = 276/315 (87%), Gaps = 6/315 (1%) Strand = Plus / Minus Query: 1905 ggtgagggtgtacaccccaaagaggcttttccagcagctggaggctgccaaggaggagtt 1964 |||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 31612608 ggtgagagtgtacactccaaagaggctgttccatcaactggaggctgccaaggaggagtt 31612549 Query: 1965 catccgggcaacggtcggcgtgtggagggagcagaagatattgctgccgaagctcgtcga 2024 ||||||||||||||| ||| | |||| ||||||||| ||| |||| || ||||||||||| Sbjct: 31612548 catccgggcaacggtgggcatctggaaggagcagaaaatactgcttccaaagctcgtcga 31612489 Query: 2025 ggcgtatgccaaggacgtcaagctctcgtcgcagggccttgtcgacatggtccagcggta 2084 ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 31612488 ggcgtatgcgaaagacgtcaagctctcgtcgcagggccttgtcgacatggtgcagcgcta 31612429 Query: 2085 cctcccggagagcctgaggatggcgatgcagaggtgccagcagcagggcggcaggtccag 2144 ||||||||||||| |||||||||| ||||||| |||||||||| |||| ||||| Sbjct: 31612428 cctcccggagagcttgaggatggcaatgcagaagtgccagcag------agcagatccag 31612375 Query: 2145 caagatcatcgagtgggtgccttacaacctcaacttccggtatctgattgccagggacct 2204 ||||||||| || ||||||||| | ||||| || |||||||||||| | |||||||||| Sbjct: 31612374 caagatcatagaatgggtgcctcataacctgaatttccggtatctgctgtccagggacct 31612315 Query: 2205 cgcgtttcctcacct 2219 || ||||||||||| Sbjct: 31612314 ggcatttcctcacct 31612300 Score = 188 bits (95), Expect = 7e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 1765 cagtggctacgtactttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcat 1824 |||||| |||||||||||||| |||||||||| |||||||||| | |||||| ||||||| Sbjct: 31613122 cagtggttacgtactttgcttcacccaaggatcaaaagcaaagtgggcaaagtagggcat 31613063 Query: 1825 gagtggcaagcctttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcg 1884 | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 31613062 gtgtggcaagcctttgccgttgcacaatcagagcctcttttacgctttgcgctttgttca 31613003 Query: 1885 ggcagccattctgatcccgcggt 1907 || |||||||||||||||||||| Sbjct: 31613002 ggaagccattctgatcccgcggt 31612980 Score = 121 bits (61), Expect = 1e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 1521 gttgattttgtaccggttggaaaccgttgatctgagaaggatgacaaacgaagagaagat 1580 ||||||||||||||||||||||||||| ||||| || || ||||| |||||||| ||||| Sbjct: 31613662 gttgattttgtaccggttggaaaccgtcgatctcaggagaatgacgaacgaagaaaagat 31613603 Query: 1581 cgcattttgggtcaacatacacaacgcactgctgatgcatg 1621 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 31613602 tgcattctgggtcaacatacacaacgcccagctgatgcatg 31613562 Score = 113 bits (57), Expect = 3e-21 Identities = 105/121 (86%) Strand = Plus / Minus Query: 994 ctccgctgccagtctgcgttgtcgtgccgcggcatctgttcgtctaggatatccccctcg 1053 ||||| |||||||||||| |||||| ||||||||| |||||||| ||||| || || ||| Sbjct: 31614454 ctccggtgccagtctgcggtgtcgtaccgcggcatttgttcgtccaggatttcaccatcg 31614395 Query: 1054 gaggagagccttgcgagggctctgcgttcgtgccactctcagcctttctcatttttggag 1113 ||||| || |||||||| ||||| || || ||||||||||| |||||||||||| ||||| Sbjct: 31614394 gaggacagtcttgcgagagctcttcggtcatgccactctcaacctttctcatttctggag 31614335 Query: 1114 g 1114 | Sbjct: 31614334 g 31614334 Score = 107 bits (54), Expect = 2e-19 Identities = 66/70 (94%) Strand = Plus / Minus Query: 542 agattcttcaactagaaaagcacctcaaggatcagcagggcgtgcgtggcgccctggaga 601 ||||||| || |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 31615034 agattctccagctagaaaagcacctcaaggatcagcaggtcatgcgtggcgccctggaga 31614975 Query: 602 aagctctggg 611 |||||||||| Sbjct: 31614974 aagctctggg 31614965 Score = 73.8 bits (37), Expect = 3e-09 Identities = 76/89 (85%) Strand = Plus / Minus Query: 1679 aggccgcctgcaaaatcgcgggacgcaacatcaatgtagccctgatccagaacttggttc 1738 |||| ||||||||||| || ||||| | |||||||||||| | ||||||| | |||||| Sbjct: 31613317 aggctgcctgcaaaattgctggacggagcatcaatgtagctgttatccagagcatggttc 31613258 Query: 1739 ttggatgtaacacacattgtcctggacag 1767 ||||||| |||||| | |||||||||||| Sbjct: 31613257 ttggatgcaacacatactgtcctggacag 31613229 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Minus Query: 1621 gcttatctcaggtatggcgtcccacagaacaatctgaagaagtcatcaatacttgtcaag 1680 |||||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| Sbjct: 31613469 gcttatctaaagtatggcgtcccacagaacaatctgaagaagacatcacttcttgttaag 31613410 Query: 1681 g 1681 | Sbjct: 31613409 g 31613409 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 683 gggagatcgccacgctggagctggaggtcaagaacatggagcagtacctgctcaccctgt 742 ||||||| || || || ||||| ||||| ||||||||||||||||| || || ||||||| Sbjct: 31614786 gggagattgctacactagagcttgaggtgaagaacatggagcagtatctccttaccctgt 31614727 Query: 743 accggcaggcgttcgagcagca 764 || || |||| || |||||||| Sbjct: 31614726 acaggaaggcctttgagcagca 31614705 Score = 56.0 bits (28), Expect = 6e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 290 ggtgccgagaaatggaggtggaggcgcacgagaagaagggccaccgggccttcgccaagg 349 |||||| ||||||||||||||||||| ||||||||||| ||| | ||||| || |||| Sbjct: 31615872 ggtgccaagaaatggaggtggaggcgatggagaagaagggacacagagcctttgctaagg 31615813 Query: 350 caat 353 |||| Sbjct: 31615812 caat 31615809 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 acgagaatccaatgccaaagg 664 ||||||||||||||||||||| Sbjct: 31614929 acgagaatccaatgccaaagg 31614909
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 212 bits (107), Expect = 4e-51 Identities = 311/379 (82%) Strand = Plus / Minus Query: 1144 agcttagcagagtatctgggcacaaatgtagctgaccatatccctgagactccaaacaat 1203 |||||||| || |||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1203603 agcttagctgactatctggggacaaatgtagctgatcatatccctgaaactccaaacaac 1203544 Query: 1204 ctttccgaggagatggtgagatgcatggcaggcgtgtactgcaaacttgcagatcctccg 1263 || || ||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1203543 ctctctgaggagatggtcaggtgcatggcaggggtgtactgcaagcttgctgatcctcct 1203484 Query: 1264 ttggttcaccacggctcctcgtcttctccgacgtcatcgttctcctcaaccagcgcaatt 1323 |||| |||||| || | ||||| |||||| | ||||| |||||||||||||| | || Sbjct: 1203483 ctggtgcaccaccgcgcatcgtcgtctccggcatcatcattctcctcaaccagtgtggtt 1203424 Query: 1324 tctccgcagtatgtgggggacatgtggagtcccaattacaagcgggagactacgctagac 1383 || || |||||| | |||||||||||||| ||||||| || | || | || || ||| Sbjct: 1203423 tccccacagtatcttggggacatgtggagccccaattgcaggaaagaagcaactctcgac 1203364 Query: 1384 tcccggttgataaacccattccatgtcgaggggttgaaggagttcagtggaccatacaat 1443 ||||||||||| ||||| || | ||||||||| ||| |||||||||||||| ||||| Sbjct: 1203363 tcccggttgatcaacccgtttcgcgtcgaggggcagaaagagttcagtggaccgtacaac 1203304 Query: 1444 acaatggttgagattccagcgatttgccgcgataatcggaggctaagagatgttgaggat 1503 || |||||||| ||||| |||||| ||| ||| ||| || ||||||| || || ||| Sbjct: 1203303 accatggttgaagttccatcgatttcccgtgatcgtcgaagattaagagaagtagaagat 1203244 Query: 1504 cttctccaaacttacaagt 1522 | |||||||||||||||| Sbjct: 1203243 ttgctccaaacttacaagt 1203225 Score = 125 bits (63), Expect = 8e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 1777 actttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcatgagtggcaagcc 1836 ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 1202498 actttgcttcacccaaggatcaaaagcaaagcgagcaaagcaggaggggaatggcaagcc 1202439 Query: 1837 tttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcgggcagccattct 1896 |||||| | ||||||||||||||||| |||||||||||||| || || |||||||| Sbjct: 1202438 tttgccatccatcaatcggagcctcttttgcgctttgcgctttgttcaggaagccattcc 1202379 Query: 1897 gatcccgcggt 1907 ||||||||||| Sbjct: 1202378 gatcccgcggt 1202368 Score = 89.7 bits (45), Expect = 4e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 1525 attttgtaccggttggaaaccgttgatctgagaaggatgacaaacgaagagaagatcgca 1584 |||||||| |||||||| ||| ||||||||||||| |||||||| || || ||||| || Sbjct: 1203102 attttgtatcggttggagaccattgatctgagaagaatgacaaatgatgaaaagattgct 1203043 Query: 1585 ttttgggtcaacatacacaacgcactgctgatgcatg 1621 || ||| ||||||||||||||||| || ||||||||| Sbjct: 1203042 ttctggatcaacatacacaacgcattgttgatgcatg 1203006 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Minus Query: 1030 tgttcgtctaggatatccccctcggaggagagccttgcgagggctctgcgttcgtgccac 1089 |||||||| ||||| || || || ||||| ||||| ||||||||||| || || |||||| Sbjct: 1204475 tgttcgtccaggatctcgccgtccgaggacagcctcgcgagggctcttcgctcctgccac 1204416 Query: 1090 tctcagcctttctcatttttggagg 1114 ||||||||||||||||| ||||||| Sbjct: 1204415 tctcagcctttctcattcttggagg 1204391 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1624 tatctcaggtatggcgtcccacagaacaatctgaagaagtcatcaatacttgtcaagg 1681 ||||||| ||||||| ||||||||||| ||||||||||| ||||| | |||||||||| Sbjct: 1202892 tatctcaagtatggcatcccacagaaccatctgaagaagacatcacttcttgtcaagg 1202835 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 1201882 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 1201823 Query: 1996 cag 1998 ||| Sbjct: 1201822 cag 1201820 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 562 cacctcaaggatcagcagggcgtgcgtggcgccctggagaaagctctggg 611 ||||||||||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1205088 cacctcaaggatcagcaggtggtgcgcggcgcactggagaaagcactggg 1205039
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 212 bits (107), Expect = 4e-51 Identities = 311/379 (82%) Strand = Plus / Minus Query: 1144 agcttagcagagtatctgggcacaaatgtagctgaccatatccctgagactccaaacaat 1203 |||||||| || |||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 105210 agcttagctgactatctggggacaaatgtagctgatcatatccctgaaactccaaacaac 105151 Query: 1204 ctttccgaggagatggtgagatgcatggcaggcgtgtactgcaaacttgcagatcctccg 1263 || || ||||||||||| || ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 105150 ctctctgaggagatggtcaggtgcatggcaggggtgtactgcaagcttgctgatcctcct 105091 Query: 1264 ttggttcaccacggctcctcgtcttctccgacgtcatcgttctcctcaaccagcgcaatt 1323 |||| |||||| || | ||||| |||||| | ||||| |||||||||||||| | || Sbjct: 105090 ctggtgcaccaccgcgcatcgtcgtctccggcatcatcattctcctcaaccagtgtggtt 105031 Query: 1324 tctccgcagtatgtgggggacatgtggagtcccaattacaagcgggagactacgctagac 1383 || || |||||| | |||||||||||||| ||||||| || | || | || || ||| Sbjct: 105030 tccccacagtatcttggggacatgtggagccccaattgcaggaaagaagcaactctcgac 104971 Query: 1384 tcccggttgataaacccattccatgtcgaggggttgaaggagttcagtggaccatacaat 1443 ||||||||||| ||||| || | ||||||||| ||| |||||||||||||| ||||| Sbjct: 104970 tcccggttgatcaacccgtttcgcgtcgaggggcagaaagagttcagtggaccgtacaac 104911 Query: 1444 acaatggttgagattccagcgatttgccgcgataatcggaggctaagagatgttgaggat 1503 || |||||||| ||||| |||||| ||| ||| ||| || ||||||| || || ||| Sbjct: 104910 accatggttgaagttccatcgatttcccgtgatcgtcgaagattaagagaagtagaagat 104851 Query: 1504 cttctccaaacttacaagt 1522 | |||||||||||||||| Sbjct: 104850 ttgctccaaacttacaagt 104832 Score = 125 bits (63), Expect = 8e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 1777 actttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcatgagtggcaagcc 1836 ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 104105 actttgcttcacccaaggatcaaaagcaaagcgagcaaagcaggaggggaatggcaagcc 104046 Query: 1837 tttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcgggcagccattct 1896 |||||| | ||||||||||||||||| |||||||||||||| || || |||||||| Sbjct: 104045 tttgccatccatcaatcggagcctcttttgcgctttgcgctttgttcaggaagccattcc 103986 Query: 1897 gatcccgcggt 1907 ||||||||||| Sbjct: 103985 gatcccgcggt 103975 Score = 89.7 bits (45), Expect = 4e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 1525 attttgtaccggttggaaaccgttgatctgagaaggatgacaaacgaagagaagatcgca 1584 |||||||| |||||||| ||| ||||||||||||| |||||||| || || ||||| || Sbjct: 104709 attttgtatcggttggagaccattgatctgagaagaatgacaaatgatgaaaagattgct 104650 Query: 1585 ttttgggtcaacatacacaacgcactgctgatgcatg 1621 || ||| ||||||||||||||||| || ||||||||| Sbjct: 104649 ttctggatcaacatacacaacgcattgttgatgcatg 104613 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Minus Query: 1030 tgttcgtctaggatatccccctcggaggagagccttgcgagggctctgcgttcgtgccac 1089 |||||||| ||||| || || || ||||| ||||| ||||||||||| || || |||||| Sbjct: 106082 tgttcgtccaggatctcgccgtccgaggacagcctcgcgagggctcttcgctcctgccac 106023 Query: 1090 tctcagcctttctcatttttggagg 1114 ||||||||||||||||| ||||||| Sbjct: 106022 tctcagcctttctcattcttggagg 105998 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1624 tatctcaggtatggcgtcccacagaacaatctgaagaagtcatcaatacttgtcaagg 1681 ||||||| ||||||| ||||||||||| ||||||||||| ||||| | |||||||||| Sbjct: 104499 tatctcaagtatggcatcccacagaaccatctgaagaagacatcacttcttgtcaagg 104442 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 103489 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 103430 Query: 1996 cag 1998 ||| Sbjct: 103429 cag 103427 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 562 cacctcaaggatcagcagggcgtgcgtggcgccctggagaaagctctggg 611 ||||||||||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 106695 cacctcaaggatcagcaggtggtgcgcggcgcactggagaaagcactggg 106646
>ref|NM_001065332.1| Oryza sativa (japonica cultivar-group) Os07g0123400 (Os07g0123400) mRNA, complete cds Length = 1011 Score = 125 bits (63), Expect = 8e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 1777 actttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcatgagtggcaagcc 1836 ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 41 actttgcttcacccaaggatcaaaagcaaagcgagcaaagcaggaggggaatggcaagcc 100 Query: 1837 tttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcgggcagccattct 1896 |||||| | ||||||||||||||||| |||||||||||||| || || |||||||| Sbjct: 101 tttgccatccatcaatcggagcctcttttgcgctttgcgctttgttcaggaagccattcc 160 Query: 1897 gatcccgcggt 1907 ||||||||||| Sbjct: 161 gatcccgcggt 171 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 657 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 716 Query: 1996 cag 1998 ||| Sbjct: 717 cag 719
>dbj|AK108214.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-E02, full insert sequence Length = 1016 Score = 125 bits (63), Expect = 8e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 1777 actttgctttacccaaggatgaaaagcaaagcgagcaaagcagggcatgagtggcaagcc 1836 ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 971 actttgcttcacccaaggatcaaaagcaaagcgagcaaagcaggaggggaatggcaagcc 912 Query: 1837 tttgccgttgcgcaatcggagcctcttttacgctttgcgctttgctcgggcagccattct 1896 |||||| | ||||||||||||||||| |||||||||||||| || || |||||||| Sbjct: 911 tttgccatccatcaatcggagcctcttttgcgctttgcgctttgttcaggaagccattcc 852 Query: 1897 gatcccgcggt 1907 ||||||||||| Sbjct: 851 gatcccgcggt 841 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 355 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 296 Query: 1996 cag 1998 ||| Sbjct: 295 cag 293
>emb|CT831399.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN053P02, full insert sequence Length = 868 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 460 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 401 Query: 1996 cag 1998 ||| Sbjct: 400 cag 398
>dbj|AK240929.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065040J09, full insert sequence Length = 711 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1936 cagcagctggaggctgccaaggaggagttcatccgggcaacggtcggcgtgtggagggag 1995 |||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| |||| Sbjct: 145 cagcagctggaggcggcgagggaggagtacatccgggcgacggtcggggtgaggaaggag 204 Query: 1996 cag 1998 ||| Sbjct: 205 cag 207
>ref|NM_001065040.1| Oryza sativa (japonica cultivar-group) Os06g0704100 (Os06g0704100) mRNA, complete cds Length = 2139 Score = 46.1 bits (23), Expect = 0.60 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1582 gcattttgggtcaacatacacaacgcactgctgatgcatgcttatct 1628 ||||||||| |||| || |||| |||||| |||||||||||||||| Sbjct: 1136 gcattttggatcaatttatacaatgcactgatgatgcatgcttatct 1182
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.60 Identities = 23/23 (100%) Strand = Plus / Minus Query: 582 cgtgcgtggcgccctggagaaag 604 ||||||||||||||||||||||| Sbjct: 4754305 cgtgcgtggcgccctggagaaag 4754283
>dbj|AK103758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143F04, full insert sequence Length = 2140 Score = 46.1 bits (23), Expect = 0.60 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1582 gcattttgggtcaacatacacaacgcactgctgatgcatgcttatct 1628 ||||||||| |||| || |||| |||||| |||||||||||||||| Sbjct: 1137 gcattttggatcaatttatacaatgcactgatgatgcatgcttatct 1183
>ref|XM_417710.2| PREDICTED: Gallus gallus similar to guanylate binding protein (LOC419563), mRNA Length = 3503 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1940 agctggaggctgccaaggaggagttc 1965 |||||||||| ||||||||||||||| Sbjct: 2372 agctggaggcagccaaggaggagttc 2397
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 cgagctgatccgggagatcgcc 693 |||||||||||||||||||||| Sbjct: 2258188 cgagctgatccgggagatcgcc 2258209
>gb|AC099789.2| Homo sapiens chromosome 1 clone RP11-377K22, complete sequence Length = 174162 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggagatggtgagatgcatggca 1233 |||||||||||||||||||||| Sbjct: 101349 ggagatggtgagatgcatggca 101370
>gb|AC067903.13| Homo sapiens, clone RP11-740O11, complete sequence Length = 198410 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1928 ggcttttccagcagctggaggctgcc 1953 ||||||||||||| |||||||||||| Sbjct: 33337 ggcttttccagcatctggaggctgcc 33312
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1870 tttgcgctttgctcgggcagccattctgatcccgcggt 1907 ||||||| |||||| || ||||| |||||||||||||| Sbjct: 13425476 tttgcgcattgctcaggaagccactctgatcccgcggt 13425439
>gb|AC022605.7| Homo sapiens, clone RP11-154E16, complete sequence Length = 168875 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1928 ggcttttccagcagctggaggctgcc 1953 ||||||||||||| |||||||||||| Sbjct: 101651 ggcttttccagcatctggaggctgcc 101626
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgga 144 |||||||||||||||||||||| Sbjct: 20346 gagagagagaggaggtggtgga 20367
>gb|AC146178.2| Pan troglodytes BAC clone RP43-35P14 from chromosome 7, complete sequence Length = 199167 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2384 gaaagaaaaataggggaagaaa 2405 |||||||||||||||||||||| Sbjct: 156077 gaaagaaaaataggggaagaaa 156098
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1280 cctcgtcttctccgacgtcatc 1301 |||||||||||||||||||||| Sbjct: 5820767 cctcgtcttctccgacgtcatc 5820788
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1870 tttgcgctttgctcgggcagccattctgatcccgcggt 1907 ||||||| |||||| || ||||| |||||||||||||| Sbjct: 86908 tttgcgcattgctcaggaagccactctgatcccgcggt 86871
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 44.1 bits (22), Expect = 2.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1870 tttgcgctttgctcgggcagccattctgatcccgcggt 1907 ||||||| |||||| || ||||| |||||||||||||| Sbjct: 36900 tttgcgcattgctcaggaagccactctgatcccgcggt 36863
>emb|BX072556.9| Zebrafish DNA sequence from clone DKEY-29F19 in linkage group 6, complete sequence Length = 163223 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgga 144 |||||||||||||||||||||| Sbjct: 125021 gagagagagaggaggtggtgga 125042
>dbj|AP004713.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915B5, complete sequence Length = 145032 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1928 ggcttttccagcagctggaggctgcc 1953 ||||||||||||| |||||||||||| Sbjct: 50947 ggcttttccagcatctggaggctgcc 50922
>ref|NM_001054362.1| Oryza sativa (japonica cultivar-group) Os02g0698800 (Os02g0698800) mRNA, complete cds Length = 1630 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgg 143 ||||||||||||||||||||| Sbjct: 19 gagagagagaggaggtggtgg 39
>gb|AC173751.5| Rhesus Macaque BAC CH250-507H10 () complete sequence Length = 133137 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 tccttctcctccctccctgcc 255 ||||||||||||||||||||| Sbjct: 30436 tccttctcctccctccctgcc 30456
>dbj|AK227157.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-86-L21 Length = 1899 Score = 42.1 bits (21), Expect = 9.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1569 cgaagagaagatcgcattttgggtcaacatacacaacgcactgctgatgcatgctta 1625 |||||||||| |||| |||||| | ||||| ||||| || || ||||||||||||| Sbjct: 1076 cgaagagaagctcgcgttttggataaacattcacaatgctcttgtgatgcatgctta 1132
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 743 accggcaggcgttcgagcagc 763 ||||||||||||||||||||| Sbjct: 1863844 accggcaggcgttcgagcagc 1863864
>gb|AC186168.1| Ornithorhynchus anatinus chromosome UNK clone OABb-35C10, complete sequence Length = 133373 Score = 42.1 bits (21), Expect = 9.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 tccctctccaaaatggctgctgttt 101 |||||| |||||||||||||||||| Sbjct: 109882 tccctccccaaaatggctgctgttt 109906
>emb|CR394525.8| Zebrafish DNA sequence from clone DKEY-24N17 in linkage group 10, complete sequence Length = 215862 Score = 42.1 bits (21), Expect = 9.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2371 attttgtgtagatgaaagaaaaata 2395 |||||||||| |||||||||||||| Sbjct: 103473 attttgtgtaaatgaaagaaaaata 103497
>ref|NM_106312.2| Arabidopsis thaliana unknown protein (AT1G76620) mRNA, complete cds Length = 1978 Score = 42.1 bits (21), Expect = 9.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1569 cgaagagaagatcgcattttgggtcaacatacacaacgcactgctgatgcatgctta 1625 |||||||||| |||| |||||| | ||||| ||||| || || ||||||||||||| Sbjct: 1167 cgaagagaagctcgcgttttggataaacattcacaatgctcttgtgatgcatgctta 1223
>gb|AC004224.1| Homo sapiens chromosome 16, cosmid clone 306E5 (LANL), complete sequence Length = 41495 Score = 42.1 bits (21), Expect = 9.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 115 aggacagcgagagagagaggaggtggtgg 143 ||||||| |||||||||||| |||||||| Sbjct: 28987 aggacagagagagagagaggcggtggtgg 28959
>gb|AC152062.6| Mus musculus BAC clone RP23-341K9 from chromosome 10, complete sequence Length = 240781 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 agcctgcgagaggagcacaaa 526 ||||||||||||||||||||| Sbjct: 196353 agcctgcgagaggagcacaaa 196373
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 cgtgcaggctaaggtgaagag 485 ||||||||||||||||||||| Sbjct: 133631 cgtgcaggctaaggtgaagag 133651
>gb|AY149945.1| Arabidopsis thaliana At1g76620/F14G6_22 mRNA, complete cds Length = 1584 Score = 42.1 bits (21), Expect = 9.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1569 cgaagagaagatcgcattttgggtcaacatacacaacgcactgctgatgcatgctta 1625 |||||||||| |||| |||||| | ||||| ||||| || || ||||||||||||| Sbjct: 939 cgaagagaagctcgcgttttggataaacattcacaatgctcttgtgatgcatgctta 995
>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete Sequence, complete sequence Length = 187794 Score = 42.1 bits (21), Expect = 9.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 496 aaggaggcgcagcctgcgagaggagcacaaagc 528 |||||||| ||||||| || ||||||||||||| Sbjct: 115970 aaggaggcccagcctgggacaggagcacaaagc 116002
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 cgtgcaggctaaggtgaagag 485 ||||||||||||||||||||| Sbjct: 31798 cgtgcaggctaaggtgaagag 31818
>dbj|AK147490.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1053L24 product:hypothetical protein, full insert sequence Length = 7925 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 agcctgcgagaggagcacaaa 526 ||||||||||||||||||||| Sbjct: 4790 agcctgcgagaggagcacaaa 4770
>ref|XM_814717.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508799.230) partial mRNA Length = 1761 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 713 agaacatggagcagtacctgc 733 ||||||||||||||||||||| Sbjct: 1517 agaacatggagcagtacctgc 1537
>ref|XM_814716.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508799.200) partial mRNA Length = 1782 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 713 agaacatggagcagtacctgc 733 ||||||||||||||||||||| Sbjct: 1457 agaacatggagcagtacctgc 1477
>ref|XM_811504.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506773.10) partial mRNA Length = 1776 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 713 agaacatggagcagtacctgc 733 ||||||||||||||||||||| Sbjct: 1451 agaacatggagcagtacctgc 1471
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 cgtgcaggctaaggtgaagag 485 ||||||||||||||||||||| Sbjct: 4057104 cgtgcaggctaaggtgaagag 4057124
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgg 143 ||||||||||||||||||||| Sbjct: 28745294 gagagagagaggaggtggtgg 28745314
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 9.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 cagcgagagagagaggaggtggtgg 143 |||||||||||||||||||| |||| Sbjct: 2418767 cagcgagagagagaggaggttgtgg 2418791
>gb|AY060575.1| Arabidopsis thaliana At1g76620/F14G6_22 mRNA, complete cds Length = 1885 Score = 42.1 bits (21), Expect = 9.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1569 cgaagagaagatcgcattttgggtcaacatacacaacgcactgctgatgcatgctta 1625 |||||||||| |||| |||||| | ||||| ||||| || || ||||||||||||| Sbjct: 1072 cgaagagaagctcgcgttttggataaacattcacaatgctcttgtgatgcatgctta 1128
>gb|DQ012476.1| Amorphophallus paeoniifolius var. bangkokensis FLORICAULA/LEAFY gene, intron 2 and partial cds Length = 367 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgg 143 ||||||||||||||||||||| Sbjct: 173 gagagagagaggaggtggtgg 193
>gb|AC007400.4| Homo sapiens BAC clone RP11-319A7 from 2, complete sequence Length = 147971 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 aagctccctgagaaaagagat 545 ||||||||||||||||||||| Sbjct: 77291 aagctccctgagaaaagagat 77311
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgg 143 ||||||||||||||||||||| Sbjct: 61867 gagagagagaggaggtggtgg 61887
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 42.1 bits (21), Expect = 9.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 cagcgagagagagaggaggtggtgg 143 |||||||||||||||||||| |||| Sbjct: 147817 cagcgagagagagaggaggttgtgg 147841
>dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjB06D23, BM0787, complete sequence Length = 102734 Score = 42.1 bits (21), Expect = 9.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1855 gagcctcttttacgctttgcgctttgctcgggcagccattctgatcccgcggt 1907 |||||||||| || |||||| || ||||| || | |||||||||||| ||||| Sbjct: 93859 gagcctctttcacactttgcactctgctcaggaaaccattctgatccagcggt 93911
>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a, complete sequence Length = 95559 Score = 42.1 bits (21), Expect = 9.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1855 gagcctcttttacgctttgcgctttgctcgggcagccattctgatcccgcggt 1907 |||||||||| || |||||| || ||||| || | |||||||||||| ||||| Sbjct: 58974 gagcctctttcacactttgcactctgctcaggaaaccattctgatccagcggt 59026
>dbj|AK073100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K09, full insert sequence Length = 1633 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gagagagagaggaggtggtgg 143 ||||||||||||||||||||| Sbjct: 20 gagagagagaggaggtggtgg 40
>dbj|AP000943.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867G2, complete sequence Length = 192299 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ctccaaaatggctgctgttta 102 ||||||||||||||||||||| Sbjct: 162495 ctccaaaatggctgctgttta 162515
>dbj|AP002376.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-349I16, complete sequence Length = 161406 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ctccaaaatggctgctgttta 102 ||||||||||||||||||||| Sbjct: 31675 ctccaaaatggctgctgttta 31695
>gb|AC140229.3| Mus musculus BAC clone RP24-488O12 from 10, complete sequence Length = 156601 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 agcctgcgagaggagcacaaa 526 ||||||||||||||||||||| Sbjct: 90919 agcctgcgagaggagcacaaa 90899
>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete sequence Length = 211363 Score = 42.1 bits (21), Expect = 9.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2382 atgaaagaaaaataggggaagaaat 2406 |||||||||||| |||||||||||| Sbjct: 62274 atgaaagaaaaacaggggaagaaat 62250
>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete sequence Length = 203613 Score = 42.1 bits (21), Expect = 9.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctctcccactccctctccaa 87 ||||||||||||||||||||| Sbjct: 106651 cctctcccactccctctccaa 106671 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 411,225,151 Number of extensions: 25864383 Number of successful extensions: 129884 Number of sequences better than 10.0: 58 Number of HSP's gapped: 129875 Number of HSP's successfully gapped: 100 Length of query: 2457 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2434 Effective length of database: 18,503,978,556 Effective search space: 45038683805304 Effective search space used: 45038683805304 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
