ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48j11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9NZW4:DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains... 43 0.013
2Q868Z9:PPN_DROME Papilin precursor - Drosophila melanogaster (Fr... 40 0.14
3P32499:NUP2_YEAST Nucleoporin NUP2 - Saccharomyces cerevisiae (B... 39 0.32
4Q932C5:CLFA_STAAM Clumping factor A precursor - Staphylococcus a... 38 0.41
5O74623:ALS3_CANAL Agglutinin-like protein 3 precursor - Candida ... 38 0.41
6P46591:HYR1_CANAL Hyphally-regulated protein precursor - Candida... 37 0.70
7Q8BQ30:PHTNS_MOUSE Phostensin - Mus musculus (Mouse) 37 0.92
8Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - ... 36 2.0
9Q8CPQ1:ATL_STAES Bifunctional autolysin precursor [Includes: N-a... 36 2.0
10Q5HQB9:ATL_STAEQ Bifunctional autolysin precursor [Includes: N-a... 36 2.0
11O33635:ATL_STAEP Bifunctional autolysin precursor - Staphylococc... 36 2.0
12Q6CJ38:SWR1_KLULA Helicase SWR1 - Kluyveromyces lactis (Yeast) (... 35 3.5
13Q9V853:SMUF1_DROME E3 ubiquitin-protein ligase Smurf1 - Drosophi... 35 3.5
14Q62598:DSPP_RAT Dentin sialophosphoprotein precursor [Contains: ... 35 3.5
15Q7A362:SRAP_STAAN Serine-rich adhesin for platelets precursor - ... 35 4.6
16Q99QY4:SRAP_STAAM Serine-rich adhesin for platelets precursor - ... 35 4.6
17Q872I5:INO80_NEUCR Putative DNA helicase ino-80 - Neurospora crassa 35 4.6
18Q9QY02:YTDC1_RAT YTH domain-containing protein 1 - Rattus norveg... 34 6.0
19Q8NUJ3:SRAP_STAAW Serine-rich adhesin for platelets precursor - ... 34 6.0
20Q6G620:SRAP_STAAS Serine-rich adhesin for platelets precursor - ... 34 6.0
21Q2FUW1:SRAP_STAA8 Serine-rich adhesin for platelets precursor - ... 34 6.0
22Q2FDK5:SRAP_STAA3 Serine-rich adhesin for platelets precursor - ... 34 6.0
23Q75AQ9:SMI1_ASHGO KNR4/SMI1 homolog - Ashbya gossypii (Yeast) (E... 34 6.0
24Q6P886:DBR1_XENTR Lariat debranching enzyme - Xenopus tropicalis... 34 6.0
25Q9NSC2:SALL1_HUMAN Sal-like protein 1 - Homo sapiens (Human) 34 7.8
26P54681:RTOA_DICDI Protein rtoA - Dictyostelium discoideum (Slime... 34 7.8
27Q9UHC1:MLH3_HUMAN DNA mismatch repair protein Mlh3 - Homo sapien... 34 7.8

>Q9NZW4:DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein|
            - Homo sapiens (Human)
          Length = 1253
 Score = 43.1 bits (100), Expect = 0.013
 Identities = 45/204 (22%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
 Frame = +3

Query: 4224 SKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKP 4403
            S  S   +D   S N+ D  S  +S+  D+  S D    N  D  N      S   +   
Sbjct: 785  SNDSSNSSDSSDSSNSSD--SSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSS 842

Query: 4404 ECSTST-ITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQ 4580
            + S S+  +D+ S+    +   +D  S++  D   +S+   ++ SS  +E   S+ S+D 
Sbjct: 843  DSSDSSDSSDSDSSNRSDSSNSSD--SSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDS 900

Query: 4581 NGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNN 4760
            + S   ++  ++     + +++S+D+ E+++++ +NS   ++  ++D  DSS   + +N+
Sbjct: 901  SNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSS-DNSNSSDSSNSSDSSDSS---DSSNS 956

Query: 4761 DAVSKSSLLAQHDNMCEQNAPDSA 4832
               S S   +   +  + N+ DS+
Sbjct: 957  SDSSNSGDSSNSSDSSDSNSSDSS 980



 Score = 37.0 bits (84), Expect = 0.92
 Identities = 41/208 (19%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
 Frame = +3

Query: 4224 SKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKP 4403
            SK +G  +D   SK   DD S +TS+  +++++ +    N  D+     G G  + +   
Sbjct: 498  SKDNGNGSD---SKGAEDDDSDSTSDTNNSDSNGNGNNGN-DDNDKSDSGKGKSDSSDSD 553

Query: 4404 ECSTSTITDAASTEPICTFEKTDIVSAEGFD----EIETSEPRVNALSSIGSEIQLSAKS 4571
               +S  +D++ +    + +      ++  D    +   S+   ++ SS  S+   S+ S
Sbjct: 554  SSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS 613

Query: 4572 NDQNGSIMGETITNNVHETEAATTSSADNVEANDANW-ENSEKHETGGTADIHDSSQIDE 4748
            +D + S   ++ ++      + + S +D+ ++N ++  +NS+  ++  +++  DSS  D 
Sbjct: 614  SDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSS--DS 671

Query: 4749 GTNNDAVSKSSLLAQHDNMCEQNAPDSA 4832
              ++D+ S S   +  D+    ++ DS+
Sbjct: 672  SDSSDSSSSSDSSSSSDSSNSSDSSDSS 699



to top

>Q868Z9:PPN_DROME Papilin precursor - Drosophila melanogaster (Fruit fly)|
          Length = 2898

 Score = 39.7 bits (91), Expect = 0.14
 Identities = 67/393 (17%), Positives = 135/393 (34%), Gaps = 8/393 (2%)
 Frame = +3

Query: 3627 VEDKNPAQDMVDIAGHVEQEDPSYEKDIVEIKLPDSVASFDYGGNFVKDVCIDDGQPLPR 3806
            + D   ++D++D+ G  + E     +D+++   P     F+  G   +    D       
Sbjct: 727  LSDDEKSEDVIDLEGTAKTETTPEAEDLMQSDSPTPYDEFESTGTTFEGSGYDSESTTDS 786

Query: 3807 KISEDKVVD--EKSCPNFDCQMIHANGAPTYTEKDSAAKSFRKPKPETLLPVDFAPDSNN 3980
             IS +   D  E S  + D      +G+ +     S + S       +  P     DS++
Sbjct: 787  GISTEGSGDDEETSEASTDLSSSTDSGSTSSDSTSSDSSSSISSDATSEAPASSVSDSSD 846

Query: 3981 ------EKTYSSCEKHDPEGRSKATNFCDXXXXXXXXXXXXXXXXAEESLHKSAISSETS 4142
                  E T  S +  D    ++A+                    A ES   S  S  T 
Sbjct: 847  STDASTETTGVSDDSTDVSSSTEAS--------------------ASESTDVSGASDSTG 886

Query: 4143 KNHVPPFHGEAVGQVSPNVYRGVEAIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEAS 4322
              +      E+  + S +     ++  + ++   +   +S +++ D + ++    D  +S
Sbjct: 887  STNASDSTPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDSNDSSDGSTDGVSS 946

Query: 4323 FDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEI 4502
                  +            S  D      ++S  TD+ S +   T  ++   S E     
Sbjct: 947  TTENSSD------------STSDATSDSTASSDSTDSTSDQTTETTPESSTDSTESSTLD 994

Query: 4503 ETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEAATTSSADNVEANDANW 4682
             +S    ++ S   SE      S   N +    T  ++   T  ATT+++DN    D   
Sbjct: 995  ASSTTDASSTSESSSESSTDGSSTTSNSASSETTGLSSDGSTTDATTAASDN---TDITT 1051

Query: 4683 ENSEKHETGGTADIHDSSQIDEGTNNDAVSKSS 4781
            + S    T G+++       +  + +  +S  S
Sbjct: 1052 DGSTDESTDGSSNASTEGSTEGASEDTTISTES 1084



 Score = 39.3 bits (90), Expect = 0.18
 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 1/191 (0%)
 Frame = +3

Query: 4212 EAIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLED 4391
            E+    +S   N   S    +     TT     A  + D+      D       + S E 
Sbjct: 1010 ESSTDGSSTTSNSASSETTGLSSDGSTTDATTAASDNTDITTDGSTDESTDGSSNASTEG 1069

Query: 4392 TCKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSS-IGSEIQLSAK 4568
            + +     +TI    STE   + E TD ++++G     T    V  LSS   S++   + 
Sbjct: 1070 STEGASEDTTI----STESSGSTESTDAIASDGST---TEGSTVEDLSSSTSSDVTSDST 1122

Query: 4569 SNDQNGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDE 4748
              D + S      T++   T+ ++T ++    ++    E+++   +GGT+D  +S   +E
Sbjct: 1123 ITDSSPSTEVSGSTDSSSSTDGSSTDASSTEASSTDVTESTDSTVSGGTSDTTESGPTEE 1182

Query: 4749 GTNNDAVSKSS 4781
             T   +   ++
Sbjct: 1183 STTEGSTESTT 1193



to top

>P32499:NUP2_YEAST Nucleoporin NUP2 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 720

 Score = 38.5 bits (88), Expect = 0.32
 Identities = 65/281 (23%), Positives = 108/281 (38%), Gaps = 6/281 (2%)
 Frame = +3

Query: 4098 AEESLHKSAISSETSKNHVPPF-HGEAVGQVSPNVYRGVEAIASKTSGLVNDIVSSKNNI 4274
            AE S       +  S+N+ P F  G+A  +  P++ +      S T    ND  S+ N+ 
Sbjct: 281  AEASFTFGTKHAADSQNNKPSFVFGQAAAK--PSLEKSSFTFGSTTIEKKNDENSTSNSK 338

Query: 4275 DDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHG----SLEDTCKPECSTSTITDAAST 4442
             + S + S + +   SF +  +N  D   P    G    S  +T KP  S    T +A  
Sbjct: 339  PEKS-SDSNDSNPSFSFSIPSKNTPDASKPSFSFGVPNSSKNETSKPVFSFGAATPSAKE 397

Query: 4443 EPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVH 4622
                  ++ D  + E      +S+P  N +S+ G+E +  +K + +     G  I+N   
Sbjct: 398  AS----QEDDNNNVEK----PSSKPAFNLISNAGTEKEKESKKDSKPAFSFG--ISNGSE 447

Query: 4623 ETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSLLAQHDN 4802
              ++   S    V+      EN +K  T        S  I+  T   A +K+       +
Sbjct: 448  SKDSDKPSLPSAVDG-----ENDKKEATKPAF----SFGINTNTTKTADTKAPTFTFGSS 498

Query: 4803 MCEQNAPDSAKAPPRIGNGYPPFEPGL-FGPSIMSAPVSNS 4922
                N  D  K P   G   P   P   FG +  + P ++S
Sbjct: 499  ALADNKED-VKKPFSFGTSQPNNTPSFSFGKTTANLPANSS 538



to top

>Q932C5:CLFA_STAAM Clumping factor A precursor - Staphylococcus aureus (strain Mu50 /|
            ATCC 700699)
          Length = 935

 Score = 38.1 bits (87), Expect = 0.41
 Identities = 58/347 (16%), Positives = 131/347 (37%), Gaps = 3/347 (0%)
 Frame = +3

Query: 3792 QPLPRKISEDKVVDEKSCPNFDCQMIHANGAPTYTEKDSAAKSFRKPKPETLLPVDFAPD 3971
            +P+P     D   D  S  N D      + + + +  DSA+ S      ++    D A D
Sbjct: 555  EPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASD 614

Query: 3972 SNNEKTYSSCEKHDPEGRSKATNFCDXXXXXXXXXXXXXXXXAEESLHKSAISSETSKNH 4151
            S++     S    D    S + +  D                A +S   SA  S+++ + 
Sbjct: 615  SDSASDSDSASDSDSASDSDSASDSDS---------------ASDS--DSASDSDSASDS 657

Query: 4152 VPPFHGEAVGQVSPNVYRGVEAIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDV 4331
                  ++      +     ++ +   S   +D  S  ++  D    +  + D+++  D 
Sbjct: 658  DSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 717

Query: 4332 RGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETS 4511
               +  D  +        +     +  + + +D+ S     +   +D  SA   D    S
Sbjct: 718  DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDS 777

Query: 4512 EPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEAATTSSADNVEANDANWENS 4691
            E   ++ S   S+       +D +     E+ +++  ++++ + S +D+   +D+  ++ 
Sbjct: 778  ESDSDSDSDSDSD-----SDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSD 832

Query: 4692 EKHETGGTADIHDSSQIDEGTNNDAVSKS---SLLAQHDNMCEQNAP 4823
               ++  ++D    S  D G++ND+ S S   S    ++N+   N+P
Sbjct: 833  SGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPPNSP 879



to top

>O74623:ALS3_CANAL Agglutinin-like protein 3 precursor - Candida albicans (Yeast)|
          Length = 1119

 Score = 38.1 bits (87), Expect = 0.41
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 1/177 (0%)
 Frame = +3

Query: 4251 IVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITD 4430
            IV+  NNI+   VT + +     S       +             E     E  +ST+T 
Sbjct: 881  IVTIPNNIETPMVTNTVDSTTTESTSQSPSGIFS-----------ESGVSVETESSTVTT 929

Query: 4431 AASTEPICTFEKTDIVSAEGFDEIETSE-PRVNALSSIGSEIQLSAKSNDQNGSIMGETI 4607
            A +   + T E   + + +G +E    E P  N  SS+           D+N      T 
Sbjct: 930  AQTNPSVPTTESEVVFTTKGNNENGPYESPSTNVKSSM-----------DENSEFTTSTA 978

Query: 4608 TNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKS 4778
             +   + E  T ++  +VEA+     +S    T  T     +S I++ TNN+   K+
Sbjct: 979  ASTSTDIENETIATTGSVEASSPIISSSADETTTVTTTAESTSVIEQPTNNNGGGKA 1035



to top

>P46591:HYR1_CANAL Hyphally-regulated protein precursor - Candida albicans (Yeast)|
          Length = 937

 Score = 37.4 bits (85), Expect = 0.70
 Identities = 43/171 (25%), Positives = 73/171 (42%)
 Frame = +3

Query: 4107 SLHKSAISSETSKNHVPPFHGEAVGQVSPNVYRGVEAIASKTSGLVNDIVSSKNNIDDCS 4286
            S+  S+ SS  +++ V      AV  ++ +      +++SK+    +D+VSS  NI+  S
Sbjct: 347  SIETSSYSSAATESSVVSESSSAVDSLTSS------SLSSKSES--SDVVSSTTNIESSS 398

Query: 4287 VTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAASTEPICTFEK 4466
                   ++E+S D    ++    +      S   T   E S+S    A+ST    T   
Sbjct: 399  TAIETTMNSESSTDAGSSSISQSES-----SSTAITSSSETSSSESMSASST----TASN 449

Query: 4467 TDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNV 4619
            T I +  G   +  SE   NALSS    I     S  Q+   +  T+T+ +
Sbjct: 450  TSIETDSGI--VSQSESSSNALSSTEQSI---TSSPGQSTIYVNSTVTSTI 495



to top

>Q8BQ30:PHTNS_MOUSE Phostensin - Mus musculus (Mouse)|
          Length = 594

 Score = 37.0 bits (84), Expect = 0.92
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 5129 SSGKMRSEFTAEKPLPPASAPLGTPPLSFRHPHRAADPVL--LEYWKCKGPGAG 4974
            + G  + E  A +P PP  APL  PP +   P  + DP++  L Y    GPG G
Sbjct: 390  TEGSRQQEEEAAEPRPPTPAPLSPPPSAPTAPQPSGDPLMSRLFYGVKPGPGVG 443



to top

>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus|
            haemolyticus (strain JCSC1435)
          Length = 3608

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
 Frame = +3

Query: 4386 EDTCKPECSTSTITDAASTEPICTFEKT--DIVSAEGFDEIETSEPRVNALSSIGSEIQL 4559
            E       +T T ++ ++TE I +   T  D  S+    E  TS    ++ +S  S    
Sbjct: 107  ETVANQNSTTVTKSETSTTEYISSQTSTSQDATSSTNSTEKSTSSSTTDSQTSTDSTSDK 166

Query: 4560 SAKSNDQNGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQ 4739
            S  ++++  S M  +      +T+A+++S+ DN  +N++    SEK            SQ
Sbjct: 167  STSNSEKQDSSMSNS------DTKASSSSTTDNSTSNNST--TSEKDTNSQANTTSTDSQ 218

Query: 4740 IDEGTNNDAVSKSSLLAQHDNMCEQNAPDS 4829
                + ND    S+  +  DN   +N+ +S
Sbjct: 219  KGSTSTNDNSITST--STKDNQIRKNSTES 246



 Score = 34.3 bits (77), Expect = 6.0
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 15/207 (7%)
 Frame = +3

Query: 4215 AIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDT 4394
            +++  TS  ++D  S+  ++ D S +TS      AS  + G       +  V   +   T
Sbjct: 1216 SLSESTSTSLSDSASASTSLSD-SASTSVSDSTSASTSLSGST-----STSVSDSTSTST 1269

Query: 4395 CKPECSTSTITDAASTEPICTFEKTDIVS--------AEGFDEIETSEPRVNALSSIGSE 4550
               E ++++++D+AS     +   +  VS          G      S+    + S  GSE
Sbjct: 1270 SLSESTSTSLSDSASASTSLSASTSTSVSDSTSASTSLSGSTSTSESDSTSMSTSLSGSE 1329

Query: 4551 IQLSAKSNDQNGSIMGETITNNVHETEAAT-------TSSADNVEANDANWENSEKHETG 4709
                + S   + S+ G T T+    T A+T       TS +D+   + +   ++   E+ 
Sbjct: 1330 STSLSDSLSASTSLSGSTSTSVSDSTSASTSLSGSTSTSVSDSTSVSTSLSASTSTSESD 1389

Query: 4710 GTADIHDSSQIDEGTNNDAVSKSSLLA 4790
             T+     S     + +D+ S S+ L+
Sbjct: 1390 STSTSTSDSASTSTSVSDSTSASTSLS 1416



to top

>Q8CPQ1:ATL_STAES Bifunctional autolysin precursor [Includes:|
            N-acetylmuramoyl-L-alanine amidase - Staphylococcus
            epidermidis (strain ATCC 12228)
          Length = 1335

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
 Frame = +3

Query: 4398 KPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSND 4577
            +P+  T + T  AS + + T+   +I S +    + T +   N  +S+    Q   ++ND
Sbjct: 79   QPKQDTQSTTYDASLDEMSTYN--EISSNQKQQSLSTDDANQNQTNSVTKNQQ--EETND 134

Query: 4578 QNGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTN 4757
                    T TN + ET++    +  ++ AN AN E  +K  T      + + +    +N
Sbjct: 135  LTQEDKTSTDTNQLQETQSVAKENEKDLGAN-ANNEQQDKKMTASQPSENQAIETQTASN 193

Query: 4758 -NDAVSKSSLLAQHDNMCEQNAPDSAKAPPRIGNGY 4862
             N++  KS  +       EQN   + K      +GY
Sbjct: 194  DNESQQKSQQVTS-----EQNETATPKVSNTNASGY 224



to top

>Q5HQB9:ATL_STAEQ Bifunctional autolysin precursor [Includes:|
            N-acetylmuramoyl-L-alanine amidase - Staphylococcus
            epidermidis (strain ATCC 35984 / RP62A)
          Length = 1335

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
 Frame = +3

Query: 4398 KPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSND 4577
            +P+  T + T  AS + + T+   +I S +    + T +   N  +S+    Q   ++ND
Sbjct: 79   QPKQDTQSTTYDASLDEMSTYN--EISSNQKQQSLSTDDANQNQTNSVTKNQQ--EETND 134

Query: 4578 QNGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTN 4757
                    T TN + ET++    +  ++ AN AN E  +K  T      + + +    +N
Sbjct: 135  LTQEDKTSTDTNQLQETQSVAKENEKDLGAN-ANNEQQDKKMTASQPSENQAIETQTASN 193

Query: 4758 -NDAVSKSSLLAQHDNMCEQNAPDSAKAPPRIGNGY 4862
             N++  KS  +       EQN   + K      +GY
Sbjct: 194  DNESQQKSQQVTS-----EQNETATPKVSNTNASGY 224



to top

>O33635:ATL_STAEP Bifunctional autolysin precursor - Staphylococcus epidermidis|
          Length = 1335

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
 Frame = +3

Query: 4398 KPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSND 4577
            +P+  T + T  AS + + T+   +I S +    + T +   N  +S+    Q   ++ND
Sbjct: 79   QPKQDTQSTTYDASLDEMSTYN--EISSNQKQQSLSTDDANQNQTNSVTKNQQ--EETND 134

Query: 4578 QNGSIMGETITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTN 4757
                    T TN + ET++    +  ++ AN AN E  +K  T      + + +    +N
Sbjct: 135  LTQEDKTSTDTNQLQETQSVAKENEKDLGAN-ANNEQQDKKMTASQPSENQAIETQTASN 193

Query: 4758 -NDAVSKSSLLAQHDNMCEQNAPDSAKAPPRIGNGY 4862
             N++  KS  +       EQN   + K      +GY
Sbjct: 194  DNESQQKSQQVTS-----EQNETATPKVSNTNASGY 224



to top

>Q6CJ38:SWR1_KLULA Helicase SWR1 - Kluyveromyces lactis (Yeast) (Candida sphaerica)|
          Length = 1572

 Score = 35.0 bits (79), Expect = 3.5
 Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
 Frame = +3

Query: 4266 NNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAASTE 4445
            N +D C+   SE  DA + F    ++         G+  ++D      S  +  +  +TE
Sbjct: 549  NQLDSCTYP-SEASDASSEFSANEES--------DGNSDIDDEMMSTSSCDSDKEG-NTE 598

Query: 4446 PICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSA-------KSNDQNGSIMGET 4604
             I    +  +      +E+ +   ++N ++  G+E   SA       +++D     M ++
Sbjct: 599  RIGNDMELSV------EELRSKYAQLNKINDFGNETSKSAADESIFDEASDSVSDSMEDS 652

Query: 4605 ITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIH---DSSQIDEGTNNDA 4766
            ++++  ETE A  S+ ++     A   N +++E    AD++   DSS  D+G + D+
Sbjct: 653  LSSSESETEDADASAQEDTPGLSALLGNIDENEEDVEADVNFDADSSS-DDGLDGDS 708



to top

>Q9V853:SMUF1_DROME E3 ubiquitin-protein ligase Smurf1 - Drosophila melanogaster (Fruit|
            fly)
          Length = 1061

 Score = 35.0 bits (79), Expect = 3.5
 Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
 Frame = +3

Query: 4467 TDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEAATTS 4646
            T+I+S+ G +    + P V+A ++ G +   S+ S+   G  + +  TN      ++TTS
Sbjct: 263  TEILSSVGKENTSPTTP-VSATTTPGKKTS-SSNSSSAGGRTLEQRPTNEPATPTSSTTS 320

Query: 4647 SADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSLLAQHDNMCEQNAPD 4826
            ++  + +ND N   + KH+T G A    +     G  N     +      +     N   
Sbjct: 321  ASVRLHSND-NHVKTPKHQTNGHAPPESTPTSPTGQQNYVNGNA-----QNGSTSGNGSG 374

Query: 4827 SAKAPPRIGNGYPPFEPG-LFGPSIMSAPVSNS 4922
             A  P    NG+   +      PS  ++P  +S
Sbjct: 375  QAAQPQSASNGWTQEDAATTTSPSTTTSPPRHS 407



to top

>Q62598:DSPP_RAT Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein|
            - Rattus norvegicus (Rat)
          Length = 687

 Score = 35.0 bits (79), Expect = 3.5
 Identities = 32/185 (17%), Positives = 87/185 (47%)
 Frame = +3

Query: 4275 DDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAASTEPIC 4454
            DD S T   + + +   + + ++  D+ N    H +  D+     S S+ +D+ S++   
Sbjct: 504  DDTSDTDDSDSNGDDDSESKDKDESDNSN----HDN--DSDSESKSDSSDSDSDSSDSSD 557

Query: 4455 TFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEA 4634
            + + +D  S+E  D  ++S+   ++ SS  S+   S+ ++D + S  G++   +  ++++
Sbjct: 558  SSDSSD--SSETSDSSDSSDTSDSSDSSDSSDSSNSSDTSDSSDSSDGDSSDGDSSDSDS 615

Query: 4635 ATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSLLAQHDNMCEQ 4814
            + + S+++ +++ ++  +S   ++  +      S  D   +N      +  +  D+  + 
Sbjct: 616  SDSDSSNSSDSDSSDSSDSSSSDSSDSDSDSKDSTSDSSDDNSKSGNGNSDSDSDSDSDS 675

Query: 4815 NAPDS 4829
               DS
Sbjct: 676  EGSDS 680



to top

>Q7A362:SRAP_STAAN Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain N315)
          Length = 2271

 Score = 34.7 bits (78), Expect = 4.6
 Identities = 39/198 (19%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
 Frame = +3

Query: 4257 SSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAA 4436
            +S++  +  S +TSE      S    G       N   G  S+  +     STST    +
Sbjct: 1219 TSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSES 1278

Query: 4437 STEPICTFEKTDIVSAEGFD---EIETSEPRVNALS-SIGSEIQLSAKSNDQNGSIMGET 4604
             +  +     T + ++          TS+ + ++LS S+ +   +S   +D   +    +
Sbjct: 1279 VSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSIST--STS 1336

Query: 4605 ITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSL 4784
            ++ +  E+E+ +TSS+++ +++  +   S    T G+     S+ + + T+  ++S S+ 
Sbjct: 1337 LSGSTSESESDSTSSSES-KSDSTSMSISMSQSTSGSTSTSTSTSLSDSTST-SLSLSAS 1394

Query: 4785 LAQ---HDNMCEQNAPDS 4829
            + Q     N   Q+A +S
Sbjct: 1395 MNQSGVDSNSASQSASNS 1412



to top

>Q99QY4:SRAP_STAAM Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain Mu50 / ATCC 700699)
          Length = 2271

 Score = 34.7 bits (78), Expect = 4.6
 Identities = 39/198 (19%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
 Frame = +3

Query: 4257 SSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAA 4436
            +S++  +  S +TSE      S    G       N   G  S+  +     STST    +
Sbjct: 1219 TSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSES 1278

Query: 4437 STEPICTFEKTDIVSAEGFD---EIETSEPRVNALS-SIGSEIQLSAKSNDQNGSIMGET 4604
             +  +     T + ++          TS+ + ++LS S+ +   +S   +D   +    +
Sbjct: 1279 VSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSIST--STS 1336

Query: 4605 ITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSL 4784
            ++ +  E+E+ +TSS+++ +++  +   S    T G+     S+ + + T+  ++S S+ 
Sbjct: 1337 LSGSTSESESDSTSSSES-KSDSTSMSISMSQSTSGSTSTSTSTSLSDSTST-SLSLSAS 1394

Query: 4785 LAQ---HDNMCEQNAPDS 4829
            + Q     N   Q+A +S
Sbjct: 1395 MNQSGVDSNSASQSASNS 1412



to top

>Q872I5:INO80_NEUCR Putative DNA helicase ino-80 - Neurospora crassa|
          Length = 2001

 Score = 34.7 bits (78), Expect = 4.6
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 1709 PRTMFTRPHCNNGSLLPAGTQATGEPPPTTSLGSQAYLQDDAPNRKHDFERRHHP 1873
            P ++    + NN + L A    + +PPP    G ++ L    P+++H  ++ HHP
Sbjct: 133  PTSIANANNTNNNNALGAAGSLSSQPPPPPPTGPRSILNPPTPSQQHQ-QQHHHP 186



to top

>Q9QY02:YTDC1_RAT YTH domain-containing protein 1 - Rattus norvegicus (Rat)|
          Length = 738

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 22/89 (24%), Positives = 39/89 (43%)
 Frame = +3

Query: 4497 EIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEAATTSSADNVEANDA 4676
            E     P  +    IG E+   A  + Q+    G +     + ++  T SSA + + N  
Sbjct: 141  ERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEGNS---EEYGSDHETGSSASSEQGN-- 195

Query: 4677 NWENSEKHETGGTADIHDSSQIDEGTNND 4763
               N+E  E GG  D+ +  ++DE  ++D
Sbjct: 196  ---NTENEEEGGEEDVEEDEEVDEDGDDD 221



to top

>Q8NUJ3:SRAP_STAAW Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain MW2)
          Length = 2275

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
 Frame = +3

Query: 4257 SSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAA 4436
            +S++  +  S +TSE      S    G       N   G  S+  +     STST    +
Sbjct: 1219 TSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSES 1278

Query: 4437 STEPICTFEKTDIVSAEGFD---EIETSEPRVNALS-SIGSEIQLSAKSNDQNGSIMGET 4604
             +  +     T +  +          TS+ + ++LS S+ +   +S   +D   +    +
Sbjct: 1279 VSTSLSMSTSTSLSDSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSIST--STS 1336

Query: 4605 ITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSL 4784
            ++ +  E+E+ +TSS+++ +++  +   S    T G+     S+ + + T+  ++S S+ 
Sbjct: 1337 LSGSTSESESDSTSSSES-KSDSTSMSISMSQSTSGSTSTSTSTSLSDSTST-SLSLSAS 1394

Query: 4785 LAQ---HDNMCEQNAPDS 4829
            + Q     N   Q+A +S
Sbjct: 1395 MNQSGVDSNSASQSASNS 1412



 Score = 34.3 bits (77), Expect = 6.0
 Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 4215 AIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDT 4394
            ++++ TSG  +  +S+  +I + + T   E  + +       +L D  +      SL D+
Sbjct: 1250 SLSNSTSGSAS--ISTSTSISESTSTFKSESVSTSLSMSTSTSLSDSTSLST---SLSDS 1304

Query: 4395 CKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSN 4574
                 S S  T  ++++ I T  K+D +S        TSE   ++ SS  S+   ++ S 
Sbjct: 1305 TSDSKSDSLSTSMSTSDSIST-SKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSI 1363

Query: 4575 DQNGSIMGETITN-NVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEG 4751
              + S  G T T+ +   +++ +TS + +   N +  +++   ++   +    +S+ D  
Sbjct: 1364 SMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQ 1423

Query: 4752 TNNDAVSKSS 4781
            + +   S+S+
Sbjct: 1424 STSSYTSQST 1433



to top

>Q6G620:SRAP_STAAS Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain MSSA476)
          Length = 2275

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
 Frame = +3

Query: 4257 SSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTITDAA 4436
            +S++  +  S +TSE      S    G       N   G  S+  +     STST    +
Sbjct: 1219 TSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSES 1278

Query: 4437 STEPICTFEKTDIVSAEGFD---EIETSEPRVNALS-SIGSEIQLSAKSNDQNGSIMGET 4604
             +  +     T +  +          TS+ + ++LS S+ +   +S   +D   +    +
Sbjct: 1279 VSTSLSMSTSTSLSDSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSIST--STS 1336

Query: 4605 ITNNVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSL 4784
            ++ +  E+E+ +TSS+++ +++  +   S    T G+     S+ + + T+  ++S S+ 
Sbjct: 1337 LSGSTSESESDSTSSSES-KSDSTSMSISMSQSTSGSTSTSTSTSLSDSTST-SLSLSAS 1394

Query: 4785 LAQ---HDNMCEQNAPDS 4829
            + Q     N   Q+A +S
Sbjct: 1395 MNQSGVDSNSASQSASNS 1412



 Score = 34.3 bits (77), Expect = 6.0
 Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 4215 AIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDT 4394
            ++++ TSG  +  +S+  +I + + T   E  + +       +L D  +      SL D+
Sbjct: 1250 SLSNSTSGSAS--ISTSTSISESTSTFKSESVSTSLSMSTSTSLSDSTSLST---SLSDS 1304

Query: 4395 CKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSN 4574
                 S S  T  ++++ I T  K+D +S        TSE   ++ SS  S+   ++ S 
Sbjct: 1305 TSDSKSDSLSTSMSTSDSIST-SKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSI 1363

Query: 4575 DQNGSIMGETITN-NVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEG 4751
              + S  G T T+ +   +++ +TS + +   N +  +++   ++   +    +S+ D  
Sbjct: 1364 SMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQ 1423

Query: 4752 TNNDAVSKSS 4781
            + +   S+S+
Sbjct: 1424 STSSYTSQST 1433



to top

>Q2FUW1:SRAP_STAA8 Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain NCTC 8325)
          Length = 2271

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 4215 AIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDT 4394
            ++++ TSG  +  +S+  +I + + T   E  + +       +L D  +      SL D+
Sbjct: 1250 SLSNSTSGSTS--ISTSTSISESTSTFKSESVSTSLSMSTSTSLSDSTSLST---SLSDS 1304

Query: 4395 CKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSN 4574
                 S S  T  ++++ I T  K+D +S        TSE   ++ SS  S+   ++ S 
Sbjct: 1305 TSDSKSDSLSTSMSTSDSIST-SKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSI 1363

Query: 4575 DQNGSIMGETITN-NVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEG 4751
              + S  G T T+ +   +++ +TS + +   N +  +++   ++   +    +S+ D  
Sbjct: 1364 SMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQ 1423

Query: 4752 TNNDAVSKSS 4781
            + +   S+S+
Sbjct: 1424 STSSYTSQST 1433



to top

>Q2FDK5:SRAP_STAA3 Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
            (strain USA300)
          Length = 2271

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 38/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 4215 AIASKTSGLVNDIVSSKNNIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDT 4394
            ++++ TSG  +  +S+  +I + + T   E  + +       +L D  +      SL D+
Sbjct: 1250 SLSNSTSGSTS--ISTSTSISESTSTFKSESVSTSLSMSTSTSLSDSTSLST---SLSDS 1304

Query: 4395 CKPECSTSTITDAASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSN 4574
                 S S  T  ++++ I T  K+D +S        TSE   ++ SS  S+   ++ S 
Sbjct: 1305 TSDSKSDSLSTSMSTSDSIST-SKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSI 1363

Query: 4575 DQNGSIMGETITN-NVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEG 4751
              + S  G T T+ +   +++ +TS + +   N +  +++   ++   +    +S+ D  
Sbjct: 1364 SMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQ 1423

Query: 4752 TNNDAVSKSS 4781
            + +   S+S+
Sbjct: 1424 STSSYTSQST 1433



to top

>Q75AQ9:SMI1_ASHGO KNR4/SMI1 homolog - Ashbya gossypii (Yeast) (Eremothecium gossypii)|
          Length = 657

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
 Frame = +3

Query: 4503 ETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETEAATTSSA-------DNV 4661
            ET  P V   S+  S+  +  + + +N     +T   N   + A T SSA       D  
Sbjct: 470  ETKTPTVTKESTPASDANVDTELDSKNTETNEDTRATNTAHSMAPTVSSAITDLTAIDEP 529

Query: 4662 EANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSLLAQHDNMCEQNAPDSAKA 4838
             A     +++EK  T    D+H++++ D    N+A ++ + +   DN    ++   A+A
Sbjct: 530  VATAGKPKDTEK--TDDAKDVHEANKQDLTKANEAEAEENAVEPKDNEVSADSKVKARA 586



to top

>Q6P886:DBR1_XENTR Lariat debranching enzyme - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 534

 Score = 34.3 bits (77), Expect = 6.0
 Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3654 MVDIAGHVEQEDPSYEKDIVEIKLPDSVASFDYGGNFVKDVCIDDGQPLPRKISEDKVVD 3833
            +VD+   + Q +   + DI E    DS+ S +  G +  D  +     L   I+ D++  
Sbjct: 376  LVDLNAKIRQHEEEGDIDITEDNEADSIGSAEDPGEYSTDTSL-----LSTSINPDEIAL 430

Query: 3834 EKSCPNFDCQMIHANG--APTYTEKDSAAKSFRKPKPETL-LPVDFAPDSNNEKTYSSCE 4004
            E      D  M    G  +P YT   S   S  +  P+++ +  D A DS N++   S E
Sbjct: 431  EDDDDQEDEGMAEKLGEPSPDYTPDLSINFSNIRVLPDSMAVSSDDATDSTNDELDRS-E 489

Query: 4005 KHDPEGRSKATN 4040
                EG  K +N
Sbjct: 490  SSQTEGEGKQSN 501



to top

>Q9NSC2:SALL1_HUMAN Sal-like protein 1 - Homo sapiens (Human)|
          Length = 1324

 Score = 33.9 bits (76), Expect = 7.8
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
 Frame = +3

Query: 4284 SVTTSEECDAEASFDVRGQNLIDHYNPF----VGHGSLEDTCKPECSTSTITDAASTEPI 4451
            S + S E D   SFD +  + +D+++         GS+ DT K   S     D+ S+ P+
Sbjct: 801  SYSESMESDT-GSFDEKNFDDLDNFSDENMEDCPEGSIPDTPK---SADASQDSLSSSPL 856

Query: 4452 CTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITNNVHETE 4631
               E + I +      +E     +NA   +  ++Q S KS + NGSI G+ +TN+     
Sbjct: 857  -PLEMSSIAA------LENQMKMINA--GLAEQLQASLKSVE-NGSIEGDVLTNDSSSVG 906

Query: 4632 AATTS-SADNVEANDANWENSEKHETGGTADIHDSSQIDE 4748
                S SA +   +++         +  T + H S  I+E
Sbjct: 907  GDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEE 946



to top

>P54681:RTOA_DICDI Protein rtoA - Dictyostelium discoideum (Slime mold)|
          Length = 400

 Score = 33.9 bits (76), Expect = 7.8
 Identities = 35/171 (20%), Positives = 73/171 (42%)
 Frame = +3

Query: 4434 ASTEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETITN 4613
            +S++ + +   +  +S+ G +   +SE  V++ S+ GS+   ++ S     S  G   T+
Sbjct: 59   SSSQSLSSEVDSSDISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSSNSGSQSTS 118

Query: 4614 NVHETEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVSKSSLLAQ 4793
            N   +EA+ +S++ +  + D++   S+    G T   +  SQ    ++N     S+  + 
Sbjct: 119  N-SGSEASGSSNSGSQSSTDSSNSGSQ----GSTGSSNSGSQSSTDSSNSGSQSSTDSSN 173

Query: 4794 HDNMCEQNAPDSAKAPPRIGNGYPPFEPGLFGPSIMSAPVSNSGHLAYSGN 4946
              +     + +S        N            S  S+  SNSG  + SG+
Sbjct: 174  SGSQGSTGSSNSGSESSGSSNSGSESSGSSNSGSESSSGSSNSGSESSSGS 224



to top

>Q9UHC1:MLH3_HUMAN DNA mismatch repair protein Mlh3 - Homo sapiens (Human)|
          Length = 1453

 Score = 33.9 bits (76), Expect = 7.8
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
 Frame = +3

Query: 4269 NIDDCSVTTSEECDAEASFDVRGQNLIDHYNPFVGHGSLEDTCKPECSTSTIT----DAA 4436
            N D C +TT E  D+++S       L     PF       +   P    S +T       
Sbjct: 800  NSDVCKITTMEHSDSDSSCQPASHILDSEKFPFSKDEDCLEQQMPSLRESPMTLKELSLF 859

Query: 4437 STEPICTFEKTDIVSAEGFDEIETSEPRVNALSSIGSEIQLSAKSNDQNGSIMGETIT-- 4610
            + +P+   EK+    A     ++ SE     +  +    +L    + +  S +   +T  
Sbjct: 860  NRKPL-DLEKSSESLASKLSRLKGSERETQTMGMMSRFNELPNSDSSRKDSKLCSVLTQD 918

Query: 4611 -----NNVHE-TEAATTSSADNVEANDANWENSEKHETGGTADIHDSSQIDEGTNNDAVS 4772
                 NN HE TE     ++D+   +++  +NS+ H    T            T N  +S
Sbjct: 919  FCMLFNNKHEKTENGVIPTSDSATQDNSFNKNSKTHSNSNT------------TENCVIS 966

Query: 4773 KSSLLAQHDN 4802
            ++ L+  ++N
Sbjct: 967  ETPLVLPYNN 976


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 971,618,364
Number of extensions: 21906752
Number of successful extensions: 53075
Number of sequences better than 10.0: 27
Number of HSP's gapped: 53014
Number of HSP's successfully gapped: 32
Length of query: 1818
Length of database: 100,686,439
Length adjustment: 128
Effective length of query: 1690
Effective length of database: 65,576,679
Effective search space: 110824587510
Effective search space used: 110824587510
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top