| Clone Name | FLbaf48i18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055841.1| Oryza sativa (japonica cultivar-group) Os03g0203200 (Os03g0203200) mRNA, complete cds Length = 1484 Score = 1154 bits (582), Expect = 0.0 Identities = 732/782 (93%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 293 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 348 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 407 Query: 294 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 353 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 408 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 467 Query: 354 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 413 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 468 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 527 Query: 414 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 473 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 528 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 587 Query: 474 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 533 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 647 Query: 534 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 648 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 707 Query: 594 atcggcgcctcgcctaggttcttgaacgacagcgactaccacggcgggttcgagctggag 653 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 atcggcgcctctccccggttcttgaacgacagcgactaccacggcgggttcgagctggag 767 Query: 654 cagatccagcaggtgttcgacgcgatgtcggccaactacgcggcgtgggcgacggggtac 713 |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 768 gagatacagcaggtgttcgacgcgatgggggcgaactactcggcgtgggcgacggggtac 827 Query: 714 gcgccgctggcggtgggcgcggacgtgccggcggcggtgcaggagttcagccggacgctg 773 ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 828 gcgcctctggcggtgggcgccgacgtgccggcggcggtgcaggagttcagccgcaccctc 887 Query: 774 ttcaacatgcggccggacatctcgctccacgtctgccagagcgtgttcaagaccgacctc 833 ||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||| Sbjct: 888 ttcaacatgcgcccggacatctccctccacgtctgccagaccgtcttcaagaccgacctc 947 Query: 834 cgcggcgtgctgggcatggtgcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtc 893 ||||||||||| |||||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 948 cgcggcgtgctcggcatggtccgcgccccctgcgtcgtcgtccagaccacccgcgacgtc 1007 Query: 894 tccgtgccggcctccgtcgccgcgtacctcaaggcccacctcggcggccgcaccaccatc 953 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1008 tccgtcccggcctccgtcgccgcctacctcaaggcccacctcggcggccgcaccaccgtc 1067 Query: 954 gagcccctgccgacggagggccacctcccccacctcagcgcccccagcctcctcgcccag 1013 ||| ||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 gagttcctccagaccgagggtcacctcccccacctcagcgcccccagcctcctcgcccag 1127 Query: 1014 gt 1015 || Sbjct: 1128 gt 1129
>dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N24, full insert sequence Length = 1487 Score = 1154 bits (582), Expect = 0.0 Identities = 732/782 (93%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 293 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 350 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 409 Query: 294 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 353 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 410 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 469 Query: 354 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 413 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 470 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 529 Query: 414 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 473 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 530 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 589 Query: 474 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 533 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 649 Query: 534 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 650 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 709 Query: 594 atcggcgcctcgcctaggttcttgaacgacagcgactaccacggcgggttcgagctggag 653 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 atcggcgcctctccccggttcttgaacgacagcgactaccacggcgggttcgagctggag 769 Query: 654 cagatccagcaggtgttcgacgcgatgtcggccaactacgcggcgtgggcgacggggtac 713 |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 770 gagatacagcaggtgttcgacgcgatgggggcgaactactcggcgtgggcgacggggtac 829 Query: 714 gcgccgctggcggtgggcgcggacgtgccggcggcggtgcaggagttcagccggacgctg 773 ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 830 gcgcctctggcggtgggcgccgacgtgccggcggcggtgcaggagttcagccgcaccctc 889 Query: 774 ttcaacatgcggccggacatctcgctccacgtctgccagagcgtgttcaagaccgacctc 833 ||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||| Sbjct: 890 ttcaacatgcgcccggacatctccctccacgtctgccagaccgtcttcaagaccgacctc 949 Query: 834 cgcggcgtgctgggcatggtgcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtc 893 ||||||||||| |||||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 950 cgcggcgtgctcggcatggtccgcgccccctgcgtcgtcgtccagaccacccgcgacgtc 1009 Query: 894 tccgtgccggcctccgtcgccgcgtacctcaaggcccacctcggcggccgcaccaccatc 953 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1010 tccgtcccggcctccgtcgccgcctacctcaaggcccacctcggcggccgcaccaccgtc 1069 Query: 954 gagcccctgccgacggagggccacctcccccacctcagcgcccccagcctcctcgcccag 1013 ||| ||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 gagttcctccagaccgagggtcacctcccccacctcagcgcccccagcctcctcgcccag 1129 Query: 1014 gt 1015 || Sbjct: 1130 gt 1131
>gb|AY109150.1| Zea mays PCO113685 mRNA sequence Length = 645 Score = 652 bits (329), Expect = 0.0 Identities = 429/463 (92%) Strand = Plus / Plus Query: 494 ccgcatcccgcgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgc 553 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 ccgcatcgcgcgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgc 237 Query: 554 ctccatccgccgccccgacctcttcgccaagctcgtcctcatcggcgcctcgcctaggtt 613 |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 238 ctccatccgccgccccgagctcttcgccaagctcgtactcatcggcgcgtcgcccaggtt 297 Query: 614 cttgaacgacagcgactaccacggcgggttcgagctggagcagatccagcaggtgttcga 673 | |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 298 cctgaacgaccacgactaccacggcgggttcgagctgccggagatccagcaggtgttcga 357 Query: 674 cgcgatgtcggccaactacgcggcgtgggcgacggggtacgcgccgctggcggtgggcgc 733 ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||||| Sbjct: 358 cgcgatggcggccaactactcggcgtgggcgaccgggtacgccccgctggcggtgggcgc 417 Query: 734 ggacgtgccggcggcggtgcaggagttcagccggacgctgttcaacatgcggccggacat 793 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 418 ggacgtgccggcggcggtgcaggagttcagccgcaccctgttcaacatgcggccggacat 477 Query: 794 ctcgctccacgtctgccagagcgtgttcaagaccgacctccgcggcgtgctgggcatggt 853 ||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| Sbjct: 478 ctccctccacgtctgccgcaccgtgttcaacaccgacctccgcggcgtgctgggcatggt 537 Query: 854 gcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtctccgtgccggcctccgtcgc 913 || | | || ||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 538 gcggtccccctgcgtggtggtgcagaccacccgcgacgtctccgtcncggcctccgtcgc 597 Query: 914 cgcgtacctcaaggcccacctcggcggccgcaccaccatcgag 956 ||| ||||||||||||||||||||||| |||||| || ||||| Sbjct: 598 cgcctacctcaaggcccacctcggcggncgcaccgccgtcgag 640
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 293 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 97002 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 97061 Query: 294 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 353 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 97062 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 97121 Query: 354 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 413 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 97122 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 97181 Query: 414 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 473 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 97182 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 97241 Query: 474 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 533 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97242 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 97301 Query: 534 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 97302 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 97361 Query: 594 atcggcgcctc 604 ||||||||||| Sbjct: 97362 atcggcgcctc 97372 Score = 561 bits (283), Expect = e-156 Identities = 376/407 (92%) Strand = Plus / Plus Query: 609 aggttcttgaacgacagcgactaccacggcgggttcgagctggagcagatccagcaggtg 668 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 97468 aggttcttgaacgacagcgactaccacggcgggttcgagctggaggagatacagcaggtg 97527 Query: 669 ttcgacgcgatgtcggccaactacgcggcgtgggcgacggggtacgcgccgctggcggtg 728 |||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 97528 ttcgacgcgatgggggcgaactactcggcgtgggcgacggggtacgcgcctctggcggtg 97587 Query: 729 ggcgcggacgtgccggcggcggtgcaggagttcagccggacgctgttcaacatgcggccg 788 ||||| |||||||||||||||||||||||||||||||| || || ||||||||||| ||| Sbjct: 97588 ggcgccgacgtgccggcggcggtgcaggagttcagccgcaccctcttcaacatgcgcccg 97647 Query: 789 gacatctcgctccacgtctgccagagcgtgttcaagaccgacctccgcggcgtgctgggc 848 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct: 97648 gacatctccctccacgtctgccagaccgtcttcaagaccgacctccgcggcgtgctcggc 97707 Query: 849 atggtgcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtctccgtgccggcctcc 908 ||||| | || || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 97708 atggtccgcgccccctgcgtcgtcgtccagaccacccgcgacgtctccgtcccggcctcc 97767 Query: 909 gtcgccgcgtacctcaaggcccacctcggcggccgcaccaccatcgagcccctgccgacg 968 |||||||| ||||||||||||||||||||||||||||||||| ||||| ||| | ||| Sbjct: 97768 gtcgccgcctacctcaaggcccacctcggcggccgcaccaccgtcgagttcctccagacc 97827 Query: 969 gagggccacctcccccacctcagcgcccccagcctcctcgcccaggt 1015 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 97828 gagggtcacctcccccacctcagcgcccccagcctcctcgcccaggt 97874
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 293 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 5390049 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 5390108 Query: 294 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 353 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 5390109 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 5390168 Query: 354 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 413 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5390169 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 5390228 Query: 414 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 473 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 5390229 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 5390288 Query: 474 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 533 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5390289 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 5390348 Query: 534 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 5390349 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 5390408 Query: 594 atcggcgcctc 604 ||||||||||| Sbjct: 5390409 atcggcgcctc 5390419 Score = 561 bits (283), Expect = e-156 Identities = 376/407 (92%) Strand = Plus / Plus Query: 609 aggttcttgaacgacagcgactaccacggcgggttcgagctggagcagatccagcaggtg 668 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 5390515 aggttcttgaacgacagcgactaccacggcgggttcgagctggaggagatacagcaggtg 5390574 Query: 669 ttcgacgcgatgtcggccaactacgcggcgtgggcgacggggtacgcgccgctggcggtg 728 |||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 5390575 ttcgacgcgatgggggcgaactactcggcgtgggcgacggggtacgcgcctctggcggtg 5390634 Query: 729 ggcgcggacgtgccggcggcggtgcaggagttcagccggacgctgttcaacatgcggccg 788 ||||| |||||||||||||||||||||||||||||||| || || ||||||||||| ||| Sbjct: 5390635 ggcgccgacgtgccggcggcggtgcaggagttcagccgcaccctcttcaacatgcgcccg 5390694 Query: 789 gacatctcgctccacgtctgccagagcgtgttcaagaccgacctccgcggcgtgctgggc 848 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct: 5390695 gacatctccctccacgtctgccagaccgtcttcaagaccgacctccgcggcgtgctcggc 5390754 Query: 849 atggtgcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtctccgtgccggcctcc 908 ||||| | || || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 5390755 atggtccgcgccccctgcgtcgtcgtccagaccacccgcgacgtctccgtcccggcctcc 5390814 Query: 909 gtcgccgcgtacctcaaggcccacctcggcggccgcaccaccatcgagcccctgccgacg 968 |||||||| ||||||||||||||||||||||||||||||||| ||||| ||| | ||| Sbjct: 5390815 gtcgccgcctacctcaaggcccacctcggcggccgcaccaccgtcgagttcctccagacc 5390874 Query: 969 gagggccacctcccccacctcagcgcccccagcctcctcgcccaggt 1015 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5390875 gagggtcacctcccccacctcagcgcccccagcctcctcgcccaggt 5390921 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Minus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 18261518 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 18261459 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 18261458 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 18261399 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 18261398 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 18261339 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 18261338 cctctccgcctcgcct 18261323
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 293 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 120725 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 120784 Query: 294 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 353 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 120785 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 120844 Query: 354 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 413 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 120845 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 120904 Query: 414 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 473 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 120905 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 120964 Query: 474 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 533 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120965 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 121024 Query: 534 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 121025 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 121084 Query: 594 atcggcgcctc 604 ||||||||||| Sbjct: 121085 atcggcgcctc 121095 Score = 545 bits (275), Expect = e-151 Identities = 374/407 (91%) Strand = Plus / Plus Query: 609 aggttcttgaacgacagcgactaccacggcgggttcgagctggagcagatccagcaggtg 668 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 121191 aggttcttgaacgacagcgactaccacggcgggttcgagctggaggagatacagcaggtg 121250 Query: 669 ttcgacgcgatgtcggccaactacgcggcgtgggcgacggggtacgcgccgctggcggtg 728 |||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 121251 ttcgacgcgatgggggcgaactactcggcgtgggcgacggggtacgcgcctctggcggtg 121310 Query: 729 ggcgcggacgtgccggcggcggtgcaggagttcagccggacgctgttcaacatgcggccg 788 ||||| |||||||||||||||||||||||||||||||| || || ||||||||||| ||| Sbjct: 121311 ggcgccgacgtgccggcggcggtgcaggagttcagccgcaccctcttcaacatgcgcccg 121370 Query: 789 gacatctcgctccacgtctgccagagcgtgttcaagaccgacctccgcggcgtgctgggc 848 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct: 121371 gacatctccctccacgtctgccagaccgtcttcaagaccgacctccgcggcgtgctcggc 121430 Query: 849 atggtgcaggcgccgtgcgtcgtcgtgcagaccacccgcgacgtctccgtgccggcctcc 908 ||||| | || || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 121431 atggtccgcgccccctgcgtcgtcgtccagaccacccgcgacgtctccgtcccggcctcc 121490 Query: 909 gtcgccgcgtacctcaaggcccacctcggcggccgcaccaccatcgagcccctgccgacg 968 |||||||| ||||||||||||||||||||||||||||||||| ||||| ||| | ||| Sbjct: 121491 gtcgccgcctacctcaaggcccacctcggcggccgcaccaccgtcgagttcctccagacc 121550 Query: 969 gagggccacctcccccacctcagcgcccccagcctcctcgcccaggt 1015 ||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 121551 gagggtcacctcccccacctcagcgcccccagcctcctagctcaggt 121597
>gb|AY389613.1| Hyacinthus orientalis esterase/lipase/thioesterase mRNA, partial cds Length = 485 Score = 222 bits (112), Expect = 2e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 366 cgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtcaacccggaccac 425 |||||||||||| | || ||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 159 cgcgaccaccgcatcgtcctctacgacctcgcctgcgccggcagcgtcaaccccgaccac 218 Query: 426 ttcgacttccgccgctacaacaacctggacgcctacgtggacgacctgctctccatcctc 485 ||||||||| |||||||| | ||| ||||||||||| |||||||| ||||||||| || Sbjct: 219 ttcgacttcgcccgctacacctccctcgacgcctacgtcgacgacctcctctccatcatc 278 Query: 486 gacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctccgccatgatcggc 545 ||||| ||||||||| |||||| || |||||| ||||||| ||||||||||| ||||| Sbjct: 279 gacgccctccgcatcgaccgctgctccctcgtcgcccactccttctccgccatggtcggc 338 Query: 546 atcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 593 ||||||||||||||||||||||| | |||||| ||||||| ||||| Sbjct: 339 gtcctcgcctccatccgccgcccccagctcttccacaagctcatcctc 386 Score = 65.9 bits (33), Expect = 3e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 249 aagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgagc-gcgtggtggtgct 307 ||||||||| |||| ||||||||| ||||||||||| ||||| ||| |||||||| || Sbjct: 42 aagctgctggagatactgaacgtgagggtggtgggctccggc-agcaaggtggtggttct 100 Query: 308 gtcgcacggcttcggcacggaccagtccgcgtggagc 344 || |||||||||||||| |||||||| | ||||||| Sbjct: 101 ctcccacggcttcggcaccgaccagtctgtgtggagc 137
>emb|AM260506.1| Platanus acerifolia partial mRNA for hydrolase (hyd2 gene) Length = 828 Score = 131 bits (66), Expect = 6e-27 Identities = 198/242 (81%) Strand = Plus / Plus Query: 384 ctctacgacctcgtctgcgccggcagcgtcaacccggaccacttcgacttccgccgctac 443 ||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| || ||| Sbjct: 294 ctctacgacctcgtctgcgccggtagcgtaaaccccgatcactttgacttccgacgatac 353 Query: 444 aacaacctggacgcctacgtggacgacctgctctccatcctcgacgcgctccgcatcccg 503 | || || |||||||||| || ||| | ||| ||||||||| || ||| |||| Sbjct: 354 accagtctctacgcctacgtcgaagacttactccacatcctcgaggctctcggcattgaa 413 Query: 504 cgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgc 563 || |||| |||||||||||| |||| ||||||||||||||||| ||||| || ||| Sbjct: 414 aaatgtgcctatgtcggccactccatctctgccatgatcggcatcctagcctcaattcgc 473 Query: 564 cgccccgacctcttcgccaagctcgtcctcatcggcgcctcgcctaggttcttgaacgac 623 ||||| || |||||| |||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 474 cgccctgatctcttcaccaaactcgtcctcattggcgcctcacccaggttcttaaacgac 533 Query: 624 ag 625 || Sbjct: 534 ag 535
>emb|CT832000.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA026H23, full insert sequence Length = 890 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 18 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 77 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 78 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 137 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 138 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 197 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 198 cctctccgcctcgcct 213
>ref|NM_001056980.1| Oryza sativa (japonica cultivar-group) Os03g0437600 (Os03g0437600) mRNA, complete cds Length = 1243 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 319 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 378 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 379 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 438 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 439 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 498 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 499 cctctccgcctcgcct 514
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Minus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 34408 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 34349 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 34348 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 34289 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 34288 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 34229 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 34228 cctctccgcctcgcct 34213
>dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E03, full insert sequence Length = 1175 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 322 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 381 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 382 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 441 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 442 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 501 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 502 cctctccgcctcgcct 517
>dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H10, full insert sequence Length = 1172 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 319 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 378 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 379 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 438 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 439 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 498 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 499 cctctccgcctcgcct 514
>dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A08, full insert sequence Length = 1245 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 321 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 380 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 381 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 440 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 441 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 500 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 501 cctctccgcctcgcct 516
>dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G08, full insert sequence Length = 1070 Score = 103 bits (52), Expect = 1e-18 Identities = 160/196 (81%) Strand = Plus / Plus Query: 413 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 472 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 222 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 281 Query: 473 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 532 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 282 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 341 Query: 533 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 592 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 342 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 401 Query: 593 catcggcgcctcgcct 608 | || |||||||||| Sbjct: 402 cctctccgcctcgcct 417
>dbj|AK070773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072C11, full insert sequence Length = 801 Score = 91.7 bits (46), Expect = 5e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 515 cgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgccgccccgacct 574 |||||||||||||||||||||| | |||||| | ||||||||||| |||||||||||| Sbjct: 60 cgtcggccactccgtctccgccgtcatcggcgccatcgcctccatctcccgccccgacct 119 Query: 575 cttcgccaagctcgtcctcatcggcgcctcgcct 608 ||| |||||||||||||| || |||||||||| Sbjct: 120 tttctccaagctcgtcctcctctccgcctcgcct 153
>gb|AY105548.1| Zea mays PCO095526 mRNA sequence Length = 852 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 303 gtgctgtcgcacggcttcggcacggaccagtccgcgtgga 342 |||||| |||||||||||||||| |||||||||| ||||| Sbjct: 293 gtgctggcgcacggcttcggcaccgaccagtccgtgtgga 332 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 515 cgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgccgccccgacct 574 ||||||||||||||||||||| | |||||| |||||||||||| | | || ||||| Sbjct: 505 cgtcggccactccgtctccgcggtcatcggcgcgctcgcctccatctccaggcctgacct 564 Query: 575 cttcgccaagctcgt 589 |||| |||||||||| Sbjct: 565 cttcaccaagctcgt 579
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Plus Query: 733 cggacgtgccggcggcggtgcagga 757 ||||||||||||||||||||||||| Sbjct: 1132395 cggacgtgccggcggcggtgcagga 1132419
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 644 cgagctggagcagatccagcaggtgttcg 672 |||| |||||||||||||||||||||||| Sbjct: 2363804 cgagatggagcagatccagcaggtgttcg 2363776
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 48.1 bits (24), Expect = 0.069 Identities = 24/24 (100%) Strand = Plus / Minus Query: 453 gacgcctacgtggacgacctgctc 476 |||||||||||||||||||||||| Sbjct: 85343 gacgcctacgtggacgacctgctc 85320
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 46.1 bits (23), Expect = 0.27 Identities = 26/27 (96%) Strand = Plus / Minus Query: 646 agctggagcagatccagcaggtgttcg 672 ||||||||||||||||||||| ||||| Sbjct: 3655755 agctggagcagatccagcaggcgttcg 3655729
>emb|CT830346.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN056K02, full insert sequence Length = 938 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 229 tggtgggcaccggcgagcgcgt 208
>ref|NM_001068276.1| Oryza sativa (japonica cultivar-group) Os08g0397900 (Os08g0397900) mRNA, complete cds Length = 1358 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 311 tggtgggcaccggcgagcgcgt 290
>ref|NM_001053918.1| Oryza sativa (japonica cultivar-group) Os02g0607700 (Os02g0607700) mRNA, complete cds Length = 1123 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 887 cgacgtctccgtgccggcctccgtcgccgc 916 ||||||||||| ||||||||||||||||| Sbjct: 290 cgacgtctccgatccggcctccgtcgccgc 319
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 cgcctccatccgccgccccgacctct 576 ||||||||||||||||| |||||||| Sbjct: 257921 cgcctccatccgccgcctcgacctct 257946
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 cgtggtgctctacgacctcgtc 398 |||||||||||||||||||||| Sbjct: 1257 cgtggtgctctacgacctcgtc 1278
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 740 gccggcggcggtgcaggagttc 761 |||||||||||||||||||||| Sbjct: 1672106 gccggcggcggtgcaggagttc 1672127
>ref|XM_572823.1| Cryptococcus neoformans var. neoformans JEC21 inositolphosphorylceramide synthase (CNI01040) partial mRNA Length = 1514 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 cgcctccatccgccgccccgacctct 576 ||||||||||||||||| |||||||| Sbjct: 143 cgcctccatccgccgcctcgacctct 168
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 18949872 tggtgggcaccggcgagcgcgt 18949851
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 887 cgacgtctccgtgccggcctccgtcgccgc 916 ||||||||||| ||||||||||||||||| Sbjct: 23853719 cgacgtctccgatccggcctccgtcgccgc 23853690
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 34792 tggtgggcaccggcgagcgcgt 34771
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 887 cgacgtctccgtgccggcctccgtcgccgc 916 ||||||||||| ||||||||||||||||| Sbjct: 75385 cgacgtctccgatccggcctccgtcgccgc 75356
>dbj|AK109817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A02, full insert sequence Length = 1358 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 311 tggtgggcaccggcgagcgcgt 290
>dbj|AK109261.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B01, full insert sequence Length = 1124 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 887 cgacgtctccgtgccggcctccgtcgccgc 916 ||||||||||| ||||||||||||||||| Sbjct: 291 cgacgtctccgatccggcctccgtcgccgc 320
>dbj|AK098973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E18, full insert sequence Length = 913 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 205 tggtgggcaccggcgagcgcgt 184
>dbj|AK060114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D12, full insert sequence Length = 1009 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tggtgggcaccggcgagcgcgt 298 |||||||||||||||||||||| Sbjct: 226 tggtgggcaccggcgagcgcgt 205
>ref|XM_842567.1| Leishmania major strain Friedlin 3,2-trans-enoyl-CoA isomerase, mitochondrial precursor-like protein (LMJ_0637) partial mRNA Length = 891 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 cgtggtgctctacgacctcgtc 398 |||||||||||||||||||||| Sbjct: 667 cgtggtgctctacgacctcgtc 646
>gb|AF126180.1|AF126180 Filobasidiella neoformans inositolphosphorylceramide synthase (IPC1) gene, complete cds Length = 1600 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 cgcctccatccgccgccccgacctct 576 ||||||||||||||||| |||||||| Sbjct: 172 cgcctccatccgccgcctcgacctct 197
>gb|CY014985.1| Influenza A virus (A/tern/South Africa/1961(H5N3)) segment 7, complete sequence Length = 1027 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 635 ccatggcctccgctgcttgct 615
>gb|AC188090.1| Mus musculus chromosome 13 clone RP23-344B21, complete sequence Length = 203666 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1055 tatttcttttctgtattttta 1075 ||||||||||||||||||||| Sbjct: 64793 tatttcttttctgtattttta 64773
>gb|CY011441.1| Influenza A virus (A/New York/632/1996(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 616 ccatggcctccgctgcttgct 596
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 cgatggtcgggggcgcgccga 240 ||||||||||||||||||||| Sbjct: 1708266 cgatggtcgggggcgcgccga 1708246 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 caacaacctggacgcctacgtggac 467 ||||||| ||||||||||||||||| Sbjct: 6785163 caacaacgtggacgcctacgtggac 6785187
>gb|CY010701.1| Influenza A virus (A/New York/625/1996(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY003753.2| Influenza A virus (A/Nanchang/0074/94(H3N2)) segment 7, complete sequence Length = 989 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctg 254 ||||||||||||||||||||| Sbjct: 10630 gcgccgagcggggcgaagctg 10650
>gb|CY009013.1| Influenza A virus (A/Nanchang/12/93(H3N2)) segment 7, complete sequence Length = 995 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctg 254 ||||||||||||||||||||| Sbjct: 2032490 gcgccgagcggggcgaagctg 2032510
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctg 254 ||||||||||||||||||||| Sbjct: 123219 gcgccgagcggggcgaagctg 123239
>gb|CY006332.2| Influenza A virus (A/Nanchang/A2/94(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>ref|XM_756575.1| Ustilago maydis 521 hypothetical protein (UM05521.1) partial mRNA Length = 1827 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gccatgatcggcatcctcgcctcca 558 |||||||||||||||||| |||||| Sbjct: 279 gccatgatcggcatcctcacctcca 255
>gb|CY005494.1| Influenza A virus (A/duck/Nanchang/1904/1992(H7N1)) segment 7, complete sequence Length = 1027 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 635 ccatggcctccgctgcttgct 615
>gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306, section 4 of 469 of the complete genome Length = 11366 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 caccggcgagcgcgtggtggtgctg 308 ||||||| ||||||||||||||||| Sbjct: 5753 caccggcaagcgcgtggtggtgctg 5729
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gcgccgagcggggcgaagctg 254 ||||||||||||||||||||| Sbjct: 2032490 gcgccgagcggggcgaagctg 2032510
>emb|AL590427.15| Human DNA sequence from clone RP11-396N10 on chromosome 1 Contains the 5' end of the NTNG1 gene for netrin G1 and a CpG island, complete sequence Length = 160135 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gctgggcatggtgcaggcgcc 862 ||||||||||||||||||||| Sbjct: 116560 gctgggcatggtgcaggcgcc 116580
>gb|S64103.1| oar=OmpA-related protein, mlpA=putative lipoprotein [Myxococcus xanthus, Genomic, 4710 nt] Length = 4710 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 cgatggtcgggggcgcgccga 240 ||||||||||||||||||||| Sbjct: 622 cgatggtcgggggcgcgccga 602
>emb|BX068585.1|CNS09P31 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 624 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 gcagatccagcaggtgttcga 673 ||||||||||||||||||||| Sbjct: 258 gcagatccagcaggtgttcga 278
>gb|CY008253.1| Influenza A virus (A/Canterbury/312/2004(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 483 ctcgacgcgctccgcatcccgcgctgcgccttcgtcggcca 523 ||||||||||| ||||||| |||||||| |||||||||| Sbjct: 1438018 ctcgacgcgctgcgcatccagcgctgcgtgctcgtcggcca 1437978
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 716 gccgctggcggtgggcgcggacgtg 740 |||||||||| |||||||||||||| Sbjct: 256851 gccgctggcgctgggcgcggacgtg 256875
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 716 gccgctggcggtgggcgcggacgtg 740 |||||||||| |||||||||||||| Sbjct: 202543 gccgctggcgctgggcgcggacgtg 202567
>emb|AJ458296.1|INA458296 Influenza A virus (A/Israel/6/2002(H1N2)) partial M1 gene for matrix protein 1 and partial M2 gene for matrix protein 2, genomic RNA Length = 749 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 487 ccatggcctccgctgcttgct 467
>emb|AJ427302.1|INA427302 Influenza A virus (A/curlew sandpiper/Hong Kong/208/89(H10N5)) M1 gene for matrix protein 1, genomic RNA Length = 982 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>gb|CY005531.1| Influenza A virus (A/duck/Nanchang/1749/1992(H11N2)) segment 7, complete sequence Length = 1027 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 635 ccatggcctccgctgcttgct 615
>gb|CY007836.1| Influenza A virus (A/Nanchang/A1/94(H3N2)) segment 7, complete sequence Length = 975 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete sequence Length = 183340 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1055 tatttcttttctgtattttta 1075 ||||||||||||||||||||| Sbjct: 170540 tatttcttttctgtattttta 170520
>gb|U49117.1|IAU49117 Influenza A virus (A/duck/Nanchang/1749/1992(H11N2)) matrix protein M2 (M) and matrix protein M1 (M) genes, complete cds Length = 1010 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|U49116.1|IAU49116 Influenza A virus (A/swine/Hong Kong/168/1993(H1N1)) matrix protein M2 (M) gene, partial cds; and matrix protein M1 (M) gene, complete cds Length = 976 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>gb|AC171737.2| Monodelphis domestica clone VMRC6-60O3 map human ortholog 11q13.4, complete sequence Length = 131794 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 995 ccccagcctcctcgcccaggt 1015 ||||||||||||||||||||| Sbjct: 14509 ccccagcctcctcgcccaggt 14529
>gb|CY006348.1| Influenza A virus (A/Nanchang/58/93(H3N2)) segment 7, complete sequence Length = 997 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY006340.1| Influenza A virus (A/Nanchang/0058/94(H3N2)) segment 7, complete sequence Length = 998 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ccatggcctccgctgcttgct 38 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 133,707,105 Number of extensions: 7551043 Number of successful extensions: 192542 Number of sequences better than 10.0: 70 Number of HSP's gapped: 192542 Number of HSP's successfully gapped: 79 Length of query: 1130 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1107 Effective length of database: 18,503,978,556 Effective search space: 20483904261492 Effective search space used: 20483904261492 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)