ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065256:Os01g0233000 117 2e-26
2AK058613:Os02g0285300 60 3e-09
3Os11g0256100:Os11g0256100 32 1.1
4AK104198:Os03g0815400 30 3.2
5AK067057:Os03g0815400 30 3.2
6Os06g0240700:Os06g0240700 29 7.0
7Os02g0583300:Os02g0583300 29 7.0

>AK065256:Os01g0233000 |
          Length = 204
 Score =  117 bits (293), Expect = 2e-26
 Identities = 68/124 (54%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
 Frame = +2

Query: 110 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 289
           MTSVWKTKVL GL+             EFLKSFN            TELEPKVVE +E+S
Sbjct: 1   MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60

Query: 290 PPEXXXXXXXXXXXXXXX-NSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 466
           PPE                N  AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F
Sbjct: 61  PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120

Query: 467 ILDK 478
           IL+K
Sbjct: 121 ILEK 124



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>AK058613:Os02g0285300 |
          Length = 232

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
 Frame = +2

Query: 122 WKTKVLPGLSXXXXXXXXXXXXX--EFLKSFNXXXXXXXXXXXX--TELEPKVVETIEAS 289
           WKTKVLP +                E +KSF+               +L+PKVVE  EA+
Sbjct: 4   WKTKVLPKIKVVFAKGGNAKKAAAAELIKSFDESKEGINGEFEEKKADLQPKVVEIYEAA 63

Query: 290 P-PEXXXXXXXXXXXXXXXNSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 466
           P P                NSAAV KF+D++AKI FPGAK +S+ + K G   LS  +  
Sbjct: 64  PAPLKVLIKDRAKVSGIKKNSAAVTKFVDDLAKIEFPGAKQLSEGIAKVGPALLSGPVFA 123

Query: 467 ILDK 478
             +K
Sbjct: 124 TFEK 127



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>Os11g0256100:Os11g0256100 |
          Length = 582

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +2

Query: 836  CGRSPVSR*LHKSKHVRTYVRRRTALAMHITHANVRTRMEHLLFFRWIGSPHRMCTFYVG 1015
            CG +PV+R L      RT V   T +AM+  H +    ++ + FFR      RM T  VG
Sbjct: 273  CGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGD---GVQAIKFFR------RMLTEKVG 323

Query: 1016 LSC 1024
              C
Sbjct: 324  FDC 326



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>AK104198:Os03g0815400 |
          Length = 210

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 840 PQIHNNLKCFLPLPAASKPGGGLRCSWSPAA 748
           P   ++L+  LP P  + P G LR S+SPAA
Sbjct: 17  PWSMSSLRAALPSPTRASPAGKLRSSFSPAA 47



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>AK067057:Os03g0815400 |
          Length = 210

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 840 PQIHNNLKCFLPLPAASKPGGGLRCSWSPAA 748
           P   ++L+  LP P  + P G LR S+SPAA
Sbjct: 17  PWSMSSLRAALPSPTRASPAGKLRSSFSPAA 47



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>Os06g0240700:Os06g0240700 |
          Length = 1114

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 115 ERMEDQGSPRAQQVLRQGWQEGRRRRVLE 201
           E +E QG P  +++LRQG+Q   R  +L+
Sbjct: 834 EELETQGVPNIERMLRQGFQTWFRNHILK 862



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>Os02g0583300:Os02g0583300 |
          Length = 1136

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 115 ERMEDQGSPRAQQVLRQGWQEGRRRRVLE 201
           E +E QG P  +++LRQG+Q   R  +L+
Sbjct: 856 EELETQGVPNIERMLRQGFQTWFRNHILK 884


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,816,806
Number of extensions: 460126
Number of successful extensions: 1169
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1165
Number of HSP's successfully gapped: 7
Length of query: 377
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 275
Effective length of database: 11,315,673
Effective search space: 3111810075
Effective search space used: 3111810075
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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