>LOC_Os01g13210:12001.t01184:unspliced-genomic DREPP4 protein, putative, expressed|
Length = 2469
Score = 59.3 bits (123), Expect(5) = 4e-24
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2 / +1
Query: 392 FPGAKLVSDAVVKSGTTPLSPAIVFILDK 478
FPGAK VSDAV KSGTTPLSPAI FIL+K
Sbjct: 1636 FPGAKPVSDAVAKSGTTPLSPAIAFILEK 1722
Score = 44.1 bits (90), Expect(5) = 4e-24
Identities = 20/36 (55%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 104 RNMTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFN 211
R MTSVWKTKVL GL+ EFLKSFN
Sbjct: 293 REMTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFN 400
Score = 37.7 bits (76), Expect(5) = 4e-24
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2 / +1
Query: 248 TELEPKVVETIEASPPE 298
TELEPKVVE +E+SPPE
Sbjct: 541 TELEPKVVEVVESSPPE 591
Score = 30.4 bits (60), Expect(5) = 4e-24
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 331 QDQEEFSCRHQVP*RDGQDW 390
Q+QEE SC H VP* G DW
Sbjct: 718 QNQEERSCSH*VP*GIG*DW 777
Score = 24.9 bits (48), Expect(5) = 4e-24
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 962 LFFRWIGSPHRMCTFYVGLSCF 1027
L + +I SPHR+ G+SCF
Sbjct: 2165 LSYIYIWSPHRL*INLCGVSCF 2230
Score = 63.8 bits (133), Expect(4) = 5e-22
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3 / -1
Query: 204 DFKNSAAAAFLPSLSKNLLSPGRTLVFHTLVIFL 103
DFKNSAAAAF PSLSK+LLSP RTLVF TLVI L
Sbjct: 393 DFKNSAAAAFFPSLSKSLLSPVRTLVFQTLVISL 292
Score = 55.6 bits (115), Expect(4) = 5e-22
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = -3 / -2
Query: 480 TLSKMKTMAGERGVVPDLTTASLTSLAPGK 391
T S+MK +AGE GVVPDL TASLT LAPGK
Sbjct: 1724 TFSRMKAIAGESGVVPDLATASLTGLAPGK 1635
Score = 28.6 bits (56), Expect(4) = 5e-22
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 305 P*FLEEMLQ*SPQPWAL 255
P* EEM Q PQPWAL
Sbjct: 598 P*SQEEMTQQPPQPWAL 548
Score = 22.6 bits (43), Expect(4) = 5e-22
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 1029 KKQESPT*NVHIR*GDPIH 973
KKQE+P ++ R*GD I+
Sbjct: 2232 KKQETPHKLIYNR*GDHIY 2176
Score = 40.0 bits (81), Expect(4) = 2e-10
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1 / +1
Query: 94 FEGEEYDERMEDQGSPRAQQVLRQGWQEGRRRRVLEIL 207
F E D+ +EDQGS QQ L QGW+EG VLEI+
Sbjct: 283 FLKERNDKCLEDQGSHWTQQAL*QGWKEGCCC*VLEII 396
Score = 37.3 bits (75), Expect(4) = 2e-10
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1 / +3
Query: 391 FPRSQAGERRGGQVXXXXXXXXXXXXXGQGCA 486
FPRSQAGERRGGQV G+G A
Sbjct: 1635 FPRSQAGERRGGQVRHDAALPGDRLHPGEGRA 1730
Score = 28.1 bits (55), Expect(4) = 2e-10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 344 NSAAVIKFLDEMAKIG 391
N AV KFL+E+AKIG
Sbjct: 731 NGPAVTKFLEELAKIG 778
Score = 24.4 bits (47), Expect(4) = 2e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 256 RAQGCGDY*SISSRN*G 306
RAQGCG * ISS +*G
Sbjct: 549 RAQGCGGC*VISS*D*G 599
Score = 37.3 bits (75), Expect(2) = 7e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 435 PDLTTASLTSLAPGKPILAISSRNLMTAAEFFLIL 331
P + S L+ PILA SSRNL+TA FFLIL
Sbjct: 822 PMQSNTSQLELSQFLPILANSSRNLVTAGPFFLIL 718
Score = 30.9 bits (61), Expect(2) = 7e-04
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 172 AILVEELAEPGENLGLPYARH 110
+ILV+EL E ENLGLP H
Sbjct: 361 SILVKELVESSENLGLPDTCH 299
Score = 35.9 bits (72), Expect = 0.54
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 431 T*PPRRSPAWLRGN 390
T PPRRSPAWLRGN
Sbjct: 1675 TWPPRRSPAWLRGN 1634
>LOC_Os02g18410:12002.t01634:unspliced-genomic DREPP2 protein, putative, expressed|
Length = 1790
Score = 37.3 bits (75), Expect(2) = 0.010
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / -3
Query: 390 PILAISSRNLMTAAEFFLILD 328
PILA SS NL+TAAEFFLI D
Sbjct: 933 PILARSSTNLVTAAEFFLIPD 871
Score = 26.3 bits (51), Expect(2) = 0.010
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 192 SAAAAFLPSLSKNLLSPGRTLVF 124
+AA LP L+K L GRTLVF
Sbjct: 231 AAAFLALPPLAKTTLIFGRTLVF 163
Score = 31.3 bits (62), Expect(3) = 0.18
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / +2
Query: 344 NSAAVIKFLDEMAKIG 391
NSAAV KF+D++AKIG
Sbjct: 887 NSAAVTKFVDDLAKIG 934
Score = 24.9 bits (48), Expect(3) = 0.18
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 251 ELEPKVVETIEASP 292
+L+PKVVE EA+P
Sbjct: 399 DLQPKVVEIYEAAP 440
Score = 21.7 bits (41), Expect(3) = 0.18
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 122 WKTKVLP 142
WKTKVLP
Sbjct: 161 WKTKVLP 181
>LOC_Os10g32990:12010.t02607:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,|
expressed
Length = 5481
Score = 30.9 bits (61), Expect(3) = 0.92
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 758 LQEQRKPPPGLLAAGNGRKH 817
L++QR P PGL AAG G +H
Sbjct: 2268 LRQQRPPRPGLRAAGVGLRH 2327
Score = 24.0 bits (46), Expect(3) = 0.92
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3 / +2
Query: 351 LPSSSSLTRWPRLVSPEPSW 410
LP S+S RW S P W
Sbjct: 200 LPLSASSGRWNTSTSASPGW 259
Score = 23.5 bits (45), Expect(3) = 0.92
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3 / +1
Query: 987 LTVCVHFTWGFLAFFFVVIK 1046
+T+ +HF+W F+V +
Sbjct: 2968 ITISIHFSWNI*KLDFIVFR 3027
>LOC_Os05g41100:12005.t03649:unspliced-genomic zz domain protein, putative, expressed|
Length = 2292
Score = 28.1 bits (55), Expect(2) = 2.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 921 CMASAVRRRTYVRTCLLLCSYLDT 850
C+A A+R ++R C LL S+ T
Sbjct: 1124 CLARAIRSSLFLRCCFLLLSFFLT 1053
Score = 27.2 bits (53), Expect(2) = 2.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -3
Query: 425 PPRRSPAWLRGNQSWPSRQG 366
P RR + R N SWPSR+G
Sbjct: 460 PRRRVHSPTRRNTSWPSRRG 401
>LOC_Os08g19390:12008.t01760:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 1283
Score = 31.3 bits (62), Expect(2) = 5.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 758 LQEQRKPPPGLLAAGNGRKH 817
+ R+PP GL +AG+GR+H
Sbjct: 1172 VSSDRRPPAGLRSAGHGRRH 1231
Score = 22.1 bits (42), Expect(2) = 5.3
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 166 GWQEGRRRRVL 198
GW++G RRR++
Sbjct: 181 GWRDGARRRLV 213
>LOC_Os07g38160:12007.t03483:unspliced-genomic expressed protein|
Length = 4913
Score = 25.4 bits (49), Expect(3) = 5.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 345 IQLPSSSSLTRWPRLVSPEPS 407
++LP S T++P + PEP+
Sbjct: 4231 VELPVKGSSTQFPAVTPPEPT 4169
Score = 24.9 bits (48), Expect(3) = 5.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 787 LASCW*WKKTF 819
LA+CW WK+ F
Sbjct: 2844 LAACWLWKQNF 2812
Score = 24.9 bits (48), Expect(3) = 5.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3 / -2
Query: 867 TKVSTYVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLT 992
T++S+ + + C S ++ + W I S +GSG LT
Sbjct: 1744 TQLSSSILLLTLLVSCSCFSLVEASLLHWGILSSAEGSGSLT 1619
>LOC_Os10g02860:12010.t00175:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4240
Score = 31.3 bits (62), Expect(2) = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 758 LQEQRKPPPGLLAAGNGRKH 817
+ R+PP GL +AG+GR+H
Sbjct: 4129 VSSDRRPPAGLRSAGHGRRH 4188
Score = 23.1 bits (44), Expect(2) = 8.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 166 GWQEGRRRRVL 198
GWQ GRR R+L
Sbjct: 2413 GWQIGRRARLL 2445
>LOC_Os04g13320:12004.t01153:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4450
Score = 31.3 bits (62), Expect(2) = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 758 LQEQRKPPPGLLAAGNGRKH 817
+ R+PP GL +AG+GR+H
Sbjct: 4339 VSSDRRPPAGLRSAGHGRRH 4398
Score = 23.1 bits (44), Expect(2) = 8.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 166 GWQEGRRRRVL 198
GWQ GRR R+L
Sbjct: 708 GWQIGRRARLL 740
>LOC_Os01g66760:12001.t06036:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor,|
putative, expressed
Length = 1669
Score = 31.8 bits (63), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1 / -3
Query: 97 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 192
E +E E R Q++ R+GW+EG RRR
Sbjct: 185 ESKEAKHTSEKTRLLRTQEIGREGWREGTRRR 90
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 336,442,190
Number of extensions: 5293281
Number of successful extensions: 23611
Number of sequences better than 10.0: 27
Length of query: 377
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 327
Effective length of database: 52,799,986
Effective search space: 17265595422
Effective search space used: 17265595422
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)