ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121212:Os01g0600000 222 2e-58
2Os05g0533800:Os05g0533800 191 4e-49
3AK069826:Os03g0849800 32 0.65
4Os05g0534800:Os05g0534800 28 9.3
5AK111706:Os01g0339800 28 9.3
6AK066809:Os09g0246200 28 9.4
7AB120431:Os09g0246200 28 9.4
8AB096014:Os09g0246200 28 9.4

>AK121212:Os01g0600000 |
          Length = 122
 Score =  222 bits (566), Expect = 2e-58
 Identities = 105/122 (86%), Positives = 114/122 (93%)
 Frame = +2

Query: 101 MAARLAQLRTKAAQAAEFASKHGGAYYKEAMEKNKQYVVQPPSVEKCQELSKQLFYTRLA 280
           MA+RLAQLR+KAAQA+E  SKHG AYYKE MEKNKQ+VVQPP+VEKCQELSKQLFYTRLA
Sbjct: 1   MASRLAQLRSKAAQASELVSKHGCAYYKEVMEKNKQHVVQPPTVEKCQELSKQLFYTRLA 60

Query: 281 SLPGRYEALWKEVDGVKQLWKNRKELRVEDLGIATLFGVELYAWFCLGEIAGRGFTLTGY 460
           SLPGRYEA WKE DGVKQ+WKNRKEL+VEDLGI TLFGVELYAWFC+GEI GRGFT+TGY
Sbjct: 61  SLPGRYEAFWKEFDGVKQVWKNRKELKVEDLGIVTLFGVELYAWFCVGEIVGRGFTITGY 120

Query: 461 KV 466
           KV
Sbjct: 121 KV 122



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>Os05g0533800:Os05g0533800 |
          Length = 125

 Score =  191 bits (486), Expect = 4e-49
 Identities = 86/124 (69%), Positives = 104/124 (83%)
 Frame = +2

Query: 95  AAMAARLAQLRTKAAQAAEFASKHGGAYYKEAMEKNKQYVVQPPSVEKCQELSKQLFYTR 274
           AA+A++LAQ++ KA  AA FA+KHG AY++  MEKN++YV  PP++E+CQELSKQLFYTR
Sbjct: 2   AALASKLAQMQAKACDAARFAAKHGCAYHRALMEKNQKYVADPPTIERCQELSKQLFYTR 61

Query: 275 LASLPGRYEALWKEVDGVKQLWKNRKELRVEDLGIATLFGVELYAWFCLGEIAGRGFTLT 454
           LASLPGRYEA WKE D VK LW+NRK+L VE  G+A LFG+ELYAWFC+GEI GRGFT T
Sbjct: 62  LASLPGRYEAFWKEADQVKNLWRNRKDLNVEHAGVAALFGIELYAWFCVGEIVGRGFTFT 121

Query: 455 GYKV 466
           GY V
Sbjct: 122 GYHV 125



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>AK069826:Os03g0849800 |
          Length = 246

 Score = 31.6 bits (70), Expect = 0.65
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 VQPPSVEKCQELSKQLFYTRLASLPGRYEALWKEVDGVKQLW-KNRKELRVEDLGIATLF 391
           + P + E CQ + +  ++ R   +  R E ++   D ++ +W +N+ +  + +LG   LF
Sbjct: 170 MDPAAYEGCQAVHRHCYFLRTTGVDYRSEKMFMSKDYLEMMWGRNKFQQTILELGYNFLF 229

Query: 392 GVELYAWF 415
                 WF
Sbjct: 230 TDVDVMWF 237



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>Os05g0534800:Os05g0534800 |
          Length = 550

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 582 RRAHNCNSAS--IICSLNCPFLCVVCNPFH*HMLH 680
           RR  NCNS     +C+    F+CV C+  H    H
Sbjct: 25  RRCINCNSLGPQYVCTSFSTFVCVSCSGIHREFTH 59



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>AK111706:Os01g0339800 |
          Length = 109

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 317 PPSTMLHSGLVDSRGACRRAAWR 249
           PP+T+L + +  +RG C+RA  R
Sbjct: 66  PPATLLPAAVASTRGGCKRATAR 88



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>AK066809:Os09g0246200 |
          Length = 951

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +2

Query: 89  VPAAMAARLAQLRTKAAQAAEFASKHGGAYYKEAMEKNKQYVVQPPSVEKCQELSKQL 262
           VPAA      +   +   +AE  + HG  Y+K AM + +Q  ++  + E+  E  ++L
Sbjct: 145 VPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYREL 202



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>AB120431:Os09g0246200 |
          Length = 1017

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +2

Query: 89  VPAAMAARLAQLRTKAAQAAEFASKHGGAYYKEAMEKNKQYVVQPPSVEKCQELSKQL 262
           VPAA      +   +   +AE  + HG  Y+K AM + +Q  ++  + E+  E  ++L
Sbjct: 145 VPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYREL 202



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>AB096014:Os09g0246200 |
          Length = 1017

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +2

Query: 89  VPAAMAARLAQLRTKAAQAAEFASKHGGAYYKEAMEKNKQYVVQPPSVEKCQELSKQL 262
           VPAA      +   +   +AE  + HG  Y+K AM + +Q  ++  + E+  E  ++L
Sbjct: 145 VPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYREL 202


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,409,784
Number of extensions: 321540
Number of successful extensions: 1036
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1036
Number of HSP's successfully gapped: 8
Length of query: 262
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 163
Effective length of database: 11,435,796
Effective search space: 1864034748
Effective search space used: 1864034748
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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