ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9F2I9:SYM_STRCO Methionyl-tRNA synthetase - Streptomyces coelic... 31 6.3

>Q9F2I9:SYM_STRCO Methionyl-tRNA synthetase - Streptomyces coelicolor|
          Length = 538
 Score = 30.8 bits (68), Expect = 6.3
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 284 LPGRYEAL-WKEVDGVKQLWKNRKELRVEDLGIATLFGVELYAWFCLGEIA 433
           LPG+  A  W  V G K    N   ++ +DL   T FGV+ Y W+ L  IA
Sbjct: 297 LPGKIAANGWLMVGGEKMSKSNLTGIKPQDL--TTHFGVDAYRWYFLRAIA 345


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 98,977,084
Number of extensions: 1879932
Number of successful extensions: 5335
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5333
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 151
Effective length of database: 70,239,694
Effective search space: 10606193794
Effective search space used: 10606193794
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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