| Clone Name | FLbaf42c18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067924:Os06g0329300 | 119 | 2e-27 | 2 | AK110071: | 28 | 7.2 | 3 | AK110474:Os10g0346300 | 28 | 7.2 | 4 | AK101275:Os01g0874100 | 27 | 9.4 | 5 | AK100772:Os06g0303800 | 27 | 9.4 | 6 | AK059730:Os04g0463400 | 27 | 9.4 |
|---|
>AK067924:Os06g0329300 | Length = 149 Score = 119 bits (297), Expect = 2e-27 Identities = 76/150 (50%), Positives = 82/150 (54%), Gaps = 18/150 (12%) Frame = +3 Query: 27 MEDHFGRKVSREEEEEAAVKPTRSFRYEDYSTRRVFLRSYPLQWD--SPAPG-GEKQ--- 188 M DH RK++ +EEEAAVKPTRSFRYEDYSTRRVFLRSYPLQWD SPAPG EKQ Sbjct: 1 MADH--RKIT-SDEEEAAVKPTRSFRYEDYSTRRVFLRSYPLQWDWASPAPGEKEKQQQQ 57 Query: 189 ----------GXXXXXXXXXXXXXXXXXXXXWKRQVVVAVVEWGEEXXXXXXXXXXXXXX 338 W+RQV VAVVEWGEE Sbjct: 58 QQVQGVVAGGDGEEDDDEYGGGGGDERGGRRWRRQVAVAVVEWGEEKLLLLRRVKKRLAL 117 Query: 339 XXIGCHYS--RPALPYKSGGGSCTTAMLKS 422 IGCHY+ R ALP+KS SCT AML S Sbjct: 118 YLIGCHYAGHRAALPFKSSSASCTAAMLAS 147
>AK110071: | Length = 420 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +3 Query: 57 REEEEEAAVKPTRSFRYEDYSTRRVFLRSYPLQWDSPAP 173 RE+ + AA + TR R STR F P + PAP Sbjct: 173 REQAQSAAAEATRYARNTAASTRETFQERRPYESRPPAP 211
>AK110474:Os10g0346300 | Length = 599 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Frame = +3 Query: 9 PAIAAK--MEDHFGRKV---SREEEEEAAVKPTRSFRYED 113 PA AA +E H+ ++ + EEEEE A +P R++ Y D Sbjct: 418 PAAAATPILEAHYYHRLHAGAGEEEEELAERPPRAYNYTD 457
>AK101275:Os01g0874100 | Length = 439 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 39 FGRKVSREEEEEAAVKPTRSFRYEDYSTRRVFLRS 143 F +V +E+E + +KP R +S R VF+R+ Sbjct: 261 FVTRVMQEKESSSGIKPLRLMERSVFSDRMVFVRA 295
>AK100772:Os06g0303800 | Length = 137 Score = 27.3 bits (59), Expect = 9.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -3 Query: 646 QYIHERSTTCTNSYYLYVGTH 584 QYI++ ST C S ++Y+ H Sbjct: 55 QYINDESTNCAESMWVYLNAH 75
>AK059730:Os04g0463400 | Length = 252 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +3 Query: 15 IAAKME-DHFGRKVSREEEEEAAVKPTRS 98 +AAK E DH+ R++ RE+EE AV T + Sbjct: 88 LAAKSEADHYQREMKREQEEIIAVPDTEA 116 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,157,241 Number of extensions: 303028 Number of successful extensions: 901 Number of sequences better than 10.0: 6 Number of HSP's gapped: 900 Number of HSP's successfully gapped: 7 Length of query: 222 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 125 Effective length of database: 11,515,878 Effective search space: 1439484750 Effective search space used: 1439484750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)