ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42c18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001064071.1| Oryza sativa (japonica cultivar-group) Os06g... 141 4e-30
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
3dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
4dbj|AK067924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 4e-30
5gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 46 0.16
6gb|AC147517.24| Medicago truncatula clone mth2-49o4, complete se... 44 0.63
7gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete s... 44 0.63
8gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 42 2.5
9gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.5
10gb|AE006470.1| Chlorobium tepidum TLS, complete genome 42 2.5
11gb|CP000479.1| Mycobacterium avium 104, complete genome 40 9.8
12ref|XM_001236977.1| PREDICTED: Gallus gallus similar to dedicato... 40 9.8
13ref|XM_001200147.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
14ref|XM_001177474.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
15ref|XM_001187621.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
16ref|XM_001189612.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
17ref|XM_001191722.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
18ref|XM_001183015.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
19ref|XM_001202513.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
20ref|XM_001181330.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 9.8
21ref|XM_777700.2| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.8
22ref|NM_001054165.1| Oryza sativa (japonica cultivar-group) Os02g... 40 9.8
23ref|XM_520457.2| PREDICTED: Pan troglodytes ADAMTS-like 2, trans... 40 9.8
24ref|XM_001169765.1| PREDICTED: Pan troglodytes ADAMTS-like 2, tr... 40 9.8
25ref|XM_516211.2| PREDICTED: Pan troglodytes hypothetical protein... 40 9.8
26ref|XM_927032.2| PREDICTED: Homo sapiens similar to ADAMTS-like ... 40 9.8
27ref|XR_012428.1| PREDICTED: Macaca mulatta similar to ADAMTS-lik... 40 9.8
28gb|DQ088168.1| Streptomyces spiroverticillatus methoxymalonyl-ac... 40 9.8
29emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 9.8
30gb|DQ306875.1| Bradyrhizobium sp. UPM1029 hydrogenase gene clust... 40 9.8
31gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.8
32gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.8
33ref|XM_368942.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 9.8
34gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.8
35gb|BC054017.1| Homo sapiens peroxisomal biogenesis factor 14, mR... 40 9.8
36dbj|AK127107.1| Homo sapiens cDNA FLJ45164 fis, clone BRAWH30441... 40 9.8
37dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.8
38dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
39emb|BX629352.5| Human DNA sequence from clone WI2-80267E6 on chr... 40 9.8
40emb|AL591403.10| Human DNA sequence from clone RP11-108G8 on chr... 40 9.8
41dbj|AB183868.1| Oryza sativa (japonica cultivar-group) OsAGK2 mR... 40 9.8
42dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.8
43dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
44dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
45dbj|AB011177.1| Homo sapiens mRNA for KIAA0605 protein, partial cds 40 9.8
46ref|NM_014694.2| Homo sapiens ADAMTS-like 2 (ADAMTSL2), mRNA >gi... 40 9.8
47gb|AY105827.1| Zea mays PCO152724 mRNA sequence 40 9.8
48emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 9.8
49gb|L33773.1|RHBHUPUVA Bradyrhizobium japonicum hupU and hupV gen... 40 9.8

>ref|NM_001064071.1| Oryza sativa (japonica cultivar-group) Os06g0329300 (Os06g0329300)
           mRNA, complete cds
          Length = 766
 Score =  141 bits (71), Expect = 4e-30
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                       
Query: 76  cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggcgggtgttcc 135
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 73  cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggagggtgttcc 132

                                      
Query: 136 tgcgaagctaccctctgcaatgggact 162
           |||| ||||||||||| || |||||||
Sbjct: 133 tgcggagctaccctctccagtgggact 159



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                       
Query: 292 aggagaagctgctgctgctcaggagggtcaagaagcggctggcgctctacctcatcggct 351
           ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 337 aggagaagctgctcctgctccggcgggtcaagaagaggctggcgctctacctcatcggct 396

                   
Query: 352 gccactac 359
           ||||||||
Sbjct: 397 gccactac 404



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  141 bits (71), Expect = 4e-30
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                            
Query: 76       cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggcgggtgttcc 135
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12845897 cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggagggtgttcc 12845956

                                           
Query: 136      tgcgaagctaccctctgcaatgggact 162
                |||| ||||||||||| || |||||||
Sbjct: 12845957 tgcggagctaccctctccagtgggact 12845983



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 292      aggagaagctgctgctgctcaggagggtcaagaagcggctggcgctctacctcatcggct 351
                ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 12846161 aggagaagctgctcctgctccggcgggtcaagaagaggctggcgctctacctcatcggct 12846220

                        
Query: 352      gccactac 359
                ||||||||
Sbjct: 12846221 gccactac 12846228



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>dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1230_H04
          Length = 123818

 Score =  141 bits (71), Expect = 4e-30
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                         
Query: 76    cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggcgggtgttcc 135
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18384 cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggagggtgttcc 18443

                                        
Query: 136   tgcgaagctaccctctgcaatgggact 162
             |||| ||||||||||| || |||||||
Sbjct: 18444 tgcggagctaccctctccagtgggact 18470



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                         
Query: 292   aggagaagctgctgctgctcaggagggtcaagaagcggctggcgctctacctcatcggct 351
             ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 18648 aggagaagctgctcctgctccggcgggtcaagaagaggctggcgctctacctcatcggct 18707

                     
Query: 352   gccactac 359
             ||||||||
Sbjct: 18708 gccactac 18715



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>dbj|AK067924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122H17, full
           insert sequence
          Length = 769

 Score =  141 bits (71), Expect = 4e-30
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                       
Query: 76  cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggcgggtgttcc 135
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 76  cggcggtgaagccgacgaggagcttccggtacgaggactacagcaccaggagggtgttcc 135

                                      
Query: 136 tgcgaagctaccctctgcaatgggact 162
           |||| ||||||||||| || |||||||
Sbjct: 136 tgcggagctaccctctccagtgggact 162



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                       
Query: 292 aggagaagctgctgctgctcaggagggtcaagaagcggctggcgctctacctcatcggct 351
           ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 340 aggagaagctgctcctgctccggcgggtcaagaagaggctggcgctctacctcatcggct 399

                   
Query: 352 gccactac 359
           ||||||||
Sbjct: 400 gccactac 407



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 329     gctggcgctctacctcatcggct 351
               |||||||||||||||||||||||
Sbjct: 1123498 gctggcgctctacctcatcggct 1123476



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>gb|AC147517.24| Medicago truncatula clone mth2-49o4, complete sequence
          Length = 125519

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 292   aggagaagctgctgctgctcag 313
             ||||||||||||||||||||||
Sbjct: 99835 aggagaagctgctgctgctcag 99856



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>gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete sequence
          Length = 148291

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 292    aggagaagctgctgctgctcag 313
              ||||||||||||||||||||||
Sbjct: 113175 aggagaagctgctgctgctcag 113154



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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 503    gagcgaccggatcttcgtgtg 523
              |||||||||||||||||||||
Sbjct: 547721 gagcgaccggatcttcgtgtg 547701



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    cggcgcccggcggcgagaagc 186
              |||||||||||||||||||||
Sbjct: 139561 cggcgcccggcggcgagaagc 139541



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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 333    gcgctctacctcatcggctgc 353
              |||||||||||||||||||||
Sbjct: 782518 gcgctctacctcatcggctgc 782538



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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     cgccggcgcccggcggcgag 182
               ||||||||||||||||||||
Sbjct: 4175599 cgccggcgcccggcggcgag 4175580



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>ref|XM_001236977.1| PREDICTED: Gallus gallus similar to dedicator of cytokinesis 5
           (LOC777531), mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 gaagctgctgctgctcagga 315
           ||||||||||||||||||||
Sbjct: 246 gaagctgctgctgctcagga 227



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>ref|XM_001200147.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin 2,3/unc44
            (LOC763989), mRNA
          Length = 3450

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gctgctgctcaggagggtca 321
            ||||||||||||||||||||
Sbjct: 2380 gctgctgctcaggagggtca 2399



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>ref|XM_001177474.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC757532), mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 556 gctgctgctcaggagggtca 575



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 754 gctgctgctcaggagggtca 773



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>ref|XM_001187621.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC760269), mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 889 gctgctgctcaggagggtca 908



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>ref|XM_001189612.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin 2,3/unc44
            (LOC760805), mRNA
          Length = 3450

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gctgctgctcaggagggtca 321
            ||||||||||||||||||||
Sbjct: 2380 gctgctgctcaggagggtca 2399



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>ref|XM_001191722.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC755776), partial mRNA
          Length = 4480

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 53  gctgctgctcaggagggtca 72



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>ref|XM_001183015.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC753673), mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 556 gctgctgctcaggagggtca 575



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 754 gctgctgctcaggagggtca 773



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>ref|XM_001202513.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC766631), partial mRNA
          Length = 4480

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 53  gctgctgctcaggagggtca 72



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>ref|XM_001181330.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin
           2,3/unc44 (LOC753149), mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 gctgctgctcaggagggtca 321
           ||||||||||||||||||||
Sbjct: 889 gctgctgctcaggagggtca 908



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>ref|XM_777700.2| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor,
            arginine/serine-rich 8 (LOC577474), partial mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  gctgctgctgctcaggaggg 318
            ||||||||||||||||||||
Sbjct: 1243 gctgctgctgctcaggaggg 1262



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>ref|NM_001054165.1| Oryza sativa (japonica cultivar-group) Os02g0657600 (Os02g0657600)
           mRNA, complete cds
          Length = 1041

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 ggagaagctgctgctgctca 312
           ||||||||||||||||||||
Sbjct: 771 ggagaagctgctgctgctca 790



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>ref|XM_520457.2| PREDICTED: Pan troglodytes ADAMTS-like 2, transcript variant 2
            (ADAMTSL2), mRNA
          Length = 3572

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2497 gggtcaagaagcggctggtgctct 2520



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>ref|XM_001169765.1| PREDICTED: Pan troglodytes ADAMTS-like 2, transcript variant 1
            (ADAMTSL2), mRNA
          Length = 3944

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2869 gggtcaagaagcggctggtgctct 2892



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>ref|XM_516211.2| PREDICTED: Pan troglodytes hypothetical protein LOC460085, transcript
            variant 3 (LOC460085), mRNA
          Length = 5200

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  agctgctgctgctcaggagg 317
            ||||||||||||||||||||
Sbjct: 4403 agctgctgctgctcaggagg 4384



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>ref|XM_927032.2| PREDICTED: Homo sapiens similar to ADAMTS-like 2 (LOC653348), mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 1565 gggtcaagaagcggctggtgctct 1588



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>ref|XR_012428.1| PREDICTED: Macaca mulatta similar to ADAMTS-like 2 (LOC713492), mRNA
          Length = 3744

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2675 gggtcaagaagcggctggtgctct 2698



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>gb|DQ088168.1| Streptomyces spiroverticillatus methoxymalonyl-acyl carrier protein
            biosynthesis gene locus, complete sequence
          Length = 4871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 496  agcccgtgagcgaccggatc 515
            ||||||||||||||||||||
Sbjct: 4851 agcccgtgagcgaccggatc 4870



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 76      cggcggtgaagccgacgagg 95
               ||||||||||||||||||||
Sbjct: 1920380 cggcggtgaagccgacgagg 1920361



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>gb|DQ306875.1| Bradyrhizobium sp. UPM1029 hydrogenase gene cluster, complete
           sequence
          Length = 18000

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cggcggcggctcctgcacca 405
           ||||||||||||||||||||
Sbjct: 610 cggcggcggctcctgcacca 629



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 386     cggcggcggctcctgcacca 405
               ||||||||||||||||||||
Sbjct: 1320498 cggcggcggctcctgcacca 1320517



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 386     cggcggcggctcctgcaccaccgc 409
               ||||||||||||| ||||||||||
Sbjct: 2366284 cggcggcggctccggcaccaccgc 2366307



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>ref|XM_368942.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00302.4) partial mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aagaagcggctggcgctctacctc 344
           ||||||||||||||||||| ||||
Sbjct: 72  aagaagcggctggcgctctgcctc 49



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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 607     aagagtttgtacaagtggtt 626
               ||||||||||||||||||||
Sbjct: 5165533 aagagtttgtacaagtggtt 5165552



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>gb|BC054017.1| Homo sapiens peroxisomal biogenesis factor 14, mRNA (cDNA clone
           IMAGE:6739162), partial cds
          Length = 330

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  ggaggatcatttcggccggaaggt 52
           ||||||||| ||||||||||||||
Sbjct: 178 ggaggatcacttcggccggaaggt 155



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>dbj|AK127107.1| Homo sapiens cDNA FLJ45164 fis, clone BRAWH3044151, weakly  similar
            to ADAM-TS 9 precursor (EC 3.4.24.-)
          Length = 3421

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2349 gggtcaagaagcggctggtgctct 2372



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     ggcgctctacctcatcggct 351
               ||||||||||||||||||||
Sbjct: 2502576 ggcgctctacctcatcggct 2502557



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      ggagaagctgctgctgctca 312
                ||||||||||||||||||||
Sbjct: 26591259 ggagaagctgctgctgctca 26591278



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>emb|BX629352.5| Human DNA sequence from clone WI2-80267E6 on chromosome 9, complete
            sequence
          Length = 24089

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 3875 gggtcaagaagcggctggtgctct 3898



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>emb|AL591403.10| Human DNA sequence from clone RP11-108G8 on chromosome 1 Contains part
             of the PEX14 gene for peroxisomal biogenesis factor 14,
             complete sequence
          Length = 97687

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    ggaggatcatttcggccggaaggt 52
             ||||||||| ||||||||||||||
Sbjct: 24155 ggaggatcacttcggccggaaggt 24132



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>dbj|AB183868.1| Oryza sativa (japonica cultivar-group) OsAGK2 mRNA for N-acetyl
           glutamate kinase 2, complete cds
          Length = 1130

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 ggagaagctgctgctgctca 312
           ||||||||||||||||||||
Sbjct: 629 ggagaagctgctgctgctca 648



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   cggctcctgcaccaccgcca 411
             ||||||||||||||||||||
Sbjct: 11054 cggctcctgcaccaccgcca 11035



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     cggcggcggctcctgcacca 405
               ||||||||||||||||||||
Sbjct: 7640293 cggcggcggctcctgcacca 7640274



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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519E06
          Length = 170634

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    ggagaagctgctgctgctca 312
              ||||||||||||||||||||
Sbjct: 133640 ggagaagctgctgctgctca 133659



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>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_F09
          Length = 139371

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   ggagaagctgctgctgctca 312
             ||||||||||||||||||||
Sbjct: 25420 ggagaagctgctgctgctca 25439



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>dbj|AB011177.1| Homo sapiens mRNA for KIAA0605 protein, partial cds
          Length = 4067

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2995 gggtcaagaagcggctggtgctct 3018



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>ref|NM_014694.2| Homo sapiens ADAMTS-like 2 (ADAMTSL2), mRNA
 gb|BC050544.1| Homo sapiens ADAMTS-like 2, mRNA (cDNA clone MGC:57627
            IMAGE:6196393), complete cds
          Length = 3740

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  gggtcaagaagcggctggcgctct 339
            |||||||||||||||||| |||||
Sbjct: 2653 gggtcaagaagcggctggtgctct 2676



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>gb|AY105827.1| Zea mays PCO152724 mRNA sequence
          Length = 971

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 ggagaagctgctgctgctca 312
           ||||||||||||||||||||
Sbjct: 476 ggagaagctgctgctgctca 495



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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    ggagaagctgctgctgctca 312
              ||||||||||||||||||||
Sbjct: 284313 ggagaagctgctgctgctca 284294



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>gb|L33773.1|RHBHUPUVA Bradyrhizobium japonicum hupU and hupV genes, complete cds
          Length = 2714

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cggcggcggctcctgcacca 405
           ||||||||||||||||||||
Sbjct: 854 cggcggcggctcctgcacca 873


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 76,431,024
Number of extensions: 4301769
Number of successful extensions: 95924
Number of sequences better than 10.0: 49
Number of HSP's gapped: 95920
Number of HSP's successfully gapped: 60
Length of query: 666
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 644
Effective length of database: 18,508,616,841
Effective search space: 11919549245604
Effective search space used: 11919549245604
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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