ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf48b02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g33100:12005.t02905:unspliced-genomic endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed| Length = 4008 Score = 111 bits (238), Expect(6) = e-107 Identities = 46/55 (83%), Positives = 51/55 (92%) Frame = +3 / +2 Query: 108 MATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFGFEAP 272 MA+PQCCA+PPTLNPAGGEGKVV+SFGGI AYV+GA ESKAAVVLISDVFG +P Sbjct: 215 MASPQCCANPPTLNPAGGEGKVVESFGGIKAYVAGAAESKAAVVLISDVFGE*SP 379 Score = 100 bits (212), Expect(6) = e-107 Identities = 40/49 (81%), Positives = 45/49 (91%) Frame = +3 / +1 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ*I* 836 I HFVKIFPGV HGWTVRYK++DA AVKSAEEAL+ MIDWF+KNL+*I* Sbjct: 3607 IGHFVKIFPGVEHGWTVRYKNDDAAAVKSAEEALADMIDWFNKNLK*I* 3753 Score = 90.4 bits (191), Expect(6) = e-107 Identities = 33/43 (76%), Positives = 38/43 (88%) Frame = +3 / +2 Query: 279 RKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAP 407 RKIADKVASSGY VVVPDFLHGDP VPE+ ++P Q+W+KEH P Sbjct: 1448 RKIADKVASSGYFVVVPDFLHGDPLVPESTEKPFQMWIKEHGP 1576 Score = 75.8 bits (159), Expect(6) = e-107 Identities = 30/38 (78%), Positives = 35/38 (92%) Frame = +3 / +2 Query: 582 IKEVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 I EVKCPIA+LGAEID+ SPPE+VKQFEQVLSS SG++ Sbjct: 2849 ISEVKCPIAILGAEIDRMSPPEVVKQFEQVLSSKSGVS 2962 Score = 68.4 bits (143), Expect(6) = e-107 Identities = 25/31 (80%), Positives = 29/31 (93%) Frame = +3 / +1 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KAFEEAKP+IAALKE+GVS++GA GYCWG K Sbjct: 2479 KAFEEAKPIIAALKEKGVSSIGAVGYCWGGK 2571 Score = 54.7 bits (113), Expect(6) = e-107 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = +3 / +2 Query: 498 AKVVAELAKANEIHAAVMSHPSFVTVEDIK 587 AKVV EL KA+EI AAVM HPSFVTV+D+K Sbjct: 2669 AKVVVELVKAHEIQAAVMCHPSFVTVDDMK 2758 Score = 81.3 bits (171), Expect(7) = 1e-73 Identities = 34/44 (77%), Positives = 35/44 (79%) Frame = -1 / -1 Query: 406 GACSFNHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLR 275 G CSF H G S SGT GSPCKKSGTTTKYPDEATLSAIFL+ Sbjct: 1575 GPCSFIHI*NGFSVLSGTKGSPCKKSGTTTKYPDEATLSAIFLQ 1444 Score = 75.8 bits (159), Expect(7) = 1e-73 Identities = 35/55 (63%), Positives = 38/55 (69%) Frame = -1 / -1 Query: 271 GASNPKTSEMRTTAALDSRAPETYAVIXXXXXXXXXXXPAGLSVGGSAQHCGVAI 107 G +PKTSEMRTTAALDS AP TYA+I PAG SVGG AQHCG+AI Sbjct: 378 GDHSPKTSEMRTTAALDSAAPATYALIPPKLSTTFPSPPAGFSVGGFAQHCGLAI 214 Score = 74.8 bits (157), Expect(7) = 1e-73 Identities = 32/49 (65%), Positives = 38/49 (77%) Frame = -3 / -1 Query: 836 SDSL*VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSN 690 S+SL VL KPV+H+ QGFL L S+C+ VSHSPSM NPRE LDKV+N Sbjct: 3753 SNSLQVLIKPVNHVRQGFLGALDSSCIIILVSHSPSMFNPREDLDKVAN 3607 Score = 65.7 bits (137), Expect(7) = 1e-73 Identities = 25/36 (69%), Positives = 29/36 (80%) Frame = -1 / -1 Query: 688 PELEDRTCSNCLTNSGGDVLSISAPSTAMGHFTSLI 581 P+ E+RTCSNC T SGGD+ SISAPS A+GH TS I Sbjct: 2955 PDFEERTCSNCFTTSGGDIRSISAPSIAIGHLTSEI 2848 Score = 51.0 bits (105), Expect(7) = 1e-73 Identities = 23/46 (50%), Positives = 27/46 (58%) Frame = -3 / -1 Query: 548 NSCMDLISFR*LSNHLCTPAITCSPNSRYSLFFESSNNRFCLFKCF 411 NS +L L TPAIT SPN+R+S +S NN F LFKCF Sbjct: 2616 NSTSELQKHNRQKKALTTPAITYSPNTRHSFLLQSGNNWFRLFKCF 2479 Score = 36.3 bits (73), Expect(7) = 1e-73 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = -1 / -1 Query: 583 ISSTVTKEGCDITAAWIS 530 ISSTVTKEG ITAAWIS Sbjct: 2754 ISSTVTKEG*HITAAWIS 2701 Score = 23.1 bits (44), Expect(7) = 1e-73 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -3 / -1 Query: 284 LPQIRRFKP 258 +PQ+RRFKP Sbjct: 492 VPQVRRFKP 466 Score = 65.7 bits (137), Expect(6) = 1e-41 Identities = 26/44 (59%), Positives = 31/44 (70%) Frame = -3 / -3 Query: 410 SRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLP 279 +R M PHL + FRY IPM*EIWHHN +SRR +F+GYLP Sbjct: 1579 NRAMFFYPHLKRFLSTFRY*RIPM*EIWHHNKVSRRGNFVGYLP 1448 Score = 63.4 bits (132), Expect(6) = 1e-41 Identities = 31/49 (63%), Positives = 35/49 (71%) Frame = -2 / -3 Query: 834 RFTVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQS 688 +FT GS *TS+S GLP+ S Q L H CISQSIH +PQG S*QS QS Sbjct: 3751 KFTSGSY*TSQSCPPGLPRRS*QQLHHHSCISQSIHVQPQGRS*QSGQS 3605 Score = 51.9 bits (107), Expect(6) = 1e-41 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = -3 / -3 Query: 689 P*VRGQNLLELLDQFWWGCFVNFSSKYSYGAFHL 588 P*+ +NLLELL FWWG +NFSSKYS AF L Sbjct: 2956 P*L*RKNLLELLHHFWWGHTINFSSKYSNWAFDL 2855 Score = 43.2 bits (88), Expect(6) = 1e-41 Identities = 18/30 (60%), Positives = 23/30 (76%) Frame = -3 / -3 Query: 587 FDIFNSNKRRV*HNSCMDLISFR*LSNHLC 498 F I NS+KR V H+S +DL+SF *L +HLC Sbjct: 2758 FHIINSHKRGVTHHSSLDLMSFH*LYHHLC 2669 Score = 27.6 bits (54), Expect(6) = 1e-41 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -1 / -2 Query: 454 SLRAAITGFASSNA 413 S RAAI GFASSNA Sbjct: 2522 SFRAAIIGFASSNA 2481 Score = 26.7 bits (52), Expect(6) = 1e-41 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -1 / -2 Query: 286 IFLRFGASNPKTSE 245 ++LRFGASNP+ E Sbjct: 494 LYLRFGASNPEREE 453 Score = 62.5 bits (130), Expect(6) = 1e-35 Identities = 27/43 (62%), Positives = 32/43 (74%) Frame = +1 / +3 Query: 280 GR*PIKSLRLDI*LWCQISYMGIHMYLKTPTDQYKCG*RSMPR 408 GR*P K RLD LWCQISYMGI YLK +++KCG*++M R Sbjct: 1449 GR*PTKLPRLDTLLWCQISYMGIL*YLKVLRNRFKCG*KNMAR 1577 Score = 57.0 bits (118), Expect(6) = 1e-35 Identities = 29/53 (54%), Positives = 36/53 (67%) Frame = +1 / +2 Query: 691 LLTLSRYSLGFLMDGL*DTKVKTQVL*RVLRKPCHI*STGLARTYSESELAVL 849 L TLSR SLG MDGL*DT++ Q+L R RKP * TGL RT SE +++ + Sbjct: 3608 LATLSRSSLGLNMDGL*DTRMMMQLLSRAPRKPWRT*LTGLIRT*SEFDISAV 3766 Score = 50.1 bits (103), Expect(6) = 1e-35 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +2 / +1 Query: 587 RGEMPHSCTWS*N*QNIPTRIGQAVRAGSVL*LR 688 RG+MP+ TWS*N* +PTR G+AVRAGS +R Sbjct: 2854 RGQMPNCYTWS*N*SYVPTRSGEAVRAGSFFKVR 2955 Score = 34.5 bits (69), Expect(6) = 1e-35 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +2 / +1 Query: 518 SES**DPCSCYVTPFFCYC*RYQR 589 SES *DP C V+P FC C* Y+R Sbjct: 2689 SESS*DPGCCDVSPLFCDC**YER 2760 Score = 29.5 bits (58), Expect(6) = 1e-35 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 / +3 Query: 407 GKSI*RGKTCYCCSQRTRSI 466 G+SI*RG+T YC S+ RS+ Sbjct: 2475 GQSI*RGETNYCRSEGERSV 2534 Score = 24.0 bits (46), Expect(6) = 1e-35 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 / +1 Query: 246 SDVFGFEAPNLR 281 S + GFEAPNLR Sbjct: 454 SSLSGFEAPNLR 489 Score = 80.3 bits (169), Expect(3) = 3e-29 Identities = 39/61 (63%), Positives = 41/61 (67%) Frame = -1 / -2 Query: 841 LIQIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCS 662 + QIH RFLLNQSI+ RASSAL TA ASS LYLTVHP TPG ILTK I C Sbjct: 3758 ICQIHFRFLLNQSIMSARASSALLTAAASSFLYLTVHPCSTPGKILTKWPICVRNKVHCQ 3579 Query: 661 N 659 N Sbjct: 3578 N 3576 Score = 62.0 bits (129), Expect(3) = 3e-29 Identities = 27/43 (62%), Positives = 32/43 (74%) Frame = -2 / -2 Query: 408 PGHAPLTTLVLVCRRFQVHMDPHVRNLAPQLNIQTKRLYRLSS 280 PGH L+T V + FQV DPHVRNLAPQ +IQT++L RLSS Sbjct: 1577 PGHVLLSTFETVSQYFQVLKDPHVRNLAPQQSIQTRQLCRLSS 1449 Score = 34.1 bits (68), Expect(3) = 3e-29 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -2 / -2 Query: 582 YLQQ*QKKGVT*QLHGSH*LSLAQQPPL 499 Y QQ QK+G T Q GSH LSL PPL Sbjct: 2753 YHQQSQKRGDTSQQPGSHELSLTLPPPL 2670 Score = 50.1 bits (103), Expect(4) = 2e-20 Identities = 21/35 (60%), Positives = 24/35 (68%) Frame = +2 / +1 Query: 305 VWIFSCGARFLTWGSICT*KRRQTNTSVVKGACPG 409 VWI CGARFLTWGS T*K +T ++V K PG Sbjct: 1474 VWILCCGARFLTWGSFST*KY*ETVSNVDKRTWPG 1578 Score = 46.9 bits (96), Expect(4) = 2e-20 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +2 / +3 Query: 689 DCSLCQDIPWGFSWMDCEIQK 751 D LCQD+PWG +WMDCEIQ+ Sbjct: 3606 DWPLCQDLPWG*TWMDCEIQE 3668 Score = 45.5 bits (93), Expect(4) = 2e-20 Identities = 22/35 (62%), Positives = 24/35 (68%) Frame = +1 / +3 Query: 586 KR*NAP*LYLELKLTKHPHQNWSSSSSRFCPLTQG 690 +R NA LYLELKL PHQ W SSSSRF +QG Sbjct: 2853 QRSNAQLLYLELKLIVCPHQKW*SSSSRFFLQSQG 2957 Score = 24.0 bits (46), Expect(4) = 2e-20 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +2 / +3 Query: 782 GSPVTYDRLV*QEPTVNL 835 GSP +D LV* EP VNL Sbjct: 3699 GSPGGHD*LV**EPEVNL 3752 Score = 43.2 bits (88), Expect = 0.003 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = -2 / -2 Query: 687 LS*RTEPARTA*PILVGMFCQFQLQVQLWGISPL 586 L+ + EPARTA P+LVG + QFQLQV GI PL Sbjct: 2954 LTLKKEPARTASPLLVGTYDQFQLQV*QLGI*PL 2853
>LOC_Os05g33110:12005.t02906:unspliced-genomic endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed| Length = 7860 Score = 88.1 bits (186), Expect(6) = 6e-80 Identities = 35/47 (74%), Positives = 38/47 (80%) Frame = +3 / +2 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 IAHFVKIFPGV HGW VRY +DA AVKSAEEAL M+DWF K L+* Sbjct: 7433 IAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK* 7573 Score = 78.0 bits (164), Expect(6) = 6e-80 Identities = 33/51 (64%), Positives = 39/51 (76%) Frame = +3 / +2 Query: 108 MATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 MA+ QC +PP L+PAGG G+VV FGG AYV+G+ SKAAVVLISD FG Sbjct: 218 MASSQCWENPPALDPAGGGGEVVGDFGGQKAYVAGSAGSKAAVVLISDAFG 370 Score = 70.7 bits (148), Expect(6) = 6e-80 Identities = 27/36 (75%), Positives = 33/36 (91%) Frame = +3 / +3 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 EVKCPI++LGAEIDKTSPPEL+KQFEQ+LS N ++ Sbjct: 2418 EVKCPISILGAEIDKTSPPELLKQFEQILSPNPEVS 2525 Score = 65.7 bits (137), Expect(6) = 6e-80 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +3 / +2 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 +AFEEAKPVIAALKE+G S +GAAGYCWG K Sbjct: 2018 EAFEEAKPVIAALKEKGASFIGAAGYCWGGK 2110 Score = 64.8 bits (135), Expect(6) = 6e-80 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = +3 / +1 Query: 279 RKIADKVASSGYLVVVPDFLHGDPYVPENADRP 377 RKIADKVA GY VVVPDFLHGDPY P+N + P Sbjct: 1198 RKIADKVALFGYFVVVPDFLHGDPYQPDNPNNP 1296 Score = 47.3 bits (97), Expect(6) = 6e-80 Identities = 19/34 (55%), Positives = 25/34 (73%) Frame = +3 / +2 Query: 486 YCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIK 587 + + AKVV EL K +EI AAV+ HPS + V+DIK Sbjct: 2222 FIFSAKVVVELGKVHEIQAAVLLHPSLLAVDDIK 2323 Score = 71.2 bits (149), Expect(6) = 1e-44 Identities = 33/49 (67%), Positives = 37/49 (75%) Frame = -1 / -1 Query: 835 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AI 689 + + R+ LNQSI+ RASSAL TA ASS LYLT HP TPG ILTK*AI Sbjct: 7578 RFYFRYFLNQSIMSSRASSALLTAAASS*LYLTAHPCSTPGKILTK*AI 7432 Score = 56.1 bits (116), Expect(6) = 1e-44 Identities = 22/32 (68%), Positives = 25/32 (78%) Frame = -1 / -3 Query: 682 LEDRTCSNCLTNSGGDVLSISAPSTAMGHFTS 587 L +R CSNC +SGGDVLSISAPS +GH TS Sbjct: 2512 LGERICSNCFNSSGGDVLSISAPSIEIGHLTS 2417 Score = 54.7 bits (113), Expect(6) = 1e-44 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 / -2 Query: 376 GLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFL 278 GL SG YGSP +KSGTTTK P++ATLSAIFL Sbjct: 1295 GLLGLSGWYGSP*RKSGTTTK*PNKATLSAIFL 1197 Score = 50.6 bits (104), Expect(6) = 1e-44 Identities = 20/30 (66%), Positives = 21/30 (70%) Frame = -3 / -3 Query: 503 LCTPAITCSPNSRYSLFFESSNNRFCLFKC 414 L TP ITCSP+ R SL S NN FCLFKC Sbjct: 2110 LTTPTITCSPDERCSLLL*SGNNWFCLFKC 2021 Score = 36.3 bits (73), Expect(6) = 1e-44 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -1 / -1 Query: 586 LISSTVTKEGCDITAAWIS 530 L+SST +KEGC TAAWIS Sbjct: 2322 LMSSTASKEGCSNTAAWIS 2266 Score = 24.9 bits (48), Expect(6) = 1e-44 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 292 SAIFLRFGASNPKTSEM 242 S +LRFGAS P EM Sbjct: 490 SIAYLRFGASKPAKREM 440 Score = 56.1 bits (116), Expect(5) = 2e-27 Identities = 23/44 (52%), Positives = 29/44 (65%) Frame = -3 / -3 Query: 821 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSN 690 V +P+ H+ QGFLS L +C+ VSHSPSM E LD+VSN Sbjct: 7564 VFLEPIHHVFQGFLSALDGSCIIVIVSHSPSMLYAGENLDEVSN 7433 Score = 54.2 bits (112), Expect(5) = 2e-27 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = -1 / -1 Query: 322 TTKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPETYAVIXXXXXXXXXXXPAGLS 143 ++++P +I L + PK SEMRTTAAL+ P TYA PAG S Sbjct: 432 SSQHP*SILACSI*LVMNRNLPKASEMRTTAALEPAEPATYAFCPPKSPTTSPPPPAGSS 253 Query: 142 VGGSAQHCGVAI 107 GG +QHC +A+ Sbjct: 252 AGGFSQHCELAM 217 Score = 40.5 bits (82), Expect(5) = 2e-27 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = -3 / -2 Query: 683 VRGQNLLELLDQFWWGCFVNFSSKYSYGAF 594 VR ++LL+LL Q WW VNFS+KY AF Sbjct: 2513 VRRKDLLKLL*QLWWRRLVNFSTKYRNWAF 2424 Score = 33.1 bits (66), Expect(5) = 2e-27 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -3 / -3 Query: 587 FDIFNSNKRRV*HNSCMDLISFR*LSNHLC 498 FD+ +S RRV* S +D + F *L ++LC Sbjct: 2323 FDVIDSK*RRV*QYSSLDFMDFA*LHHYLC 2234 Score = 30.4 bits (60), Expect(5) = 2e-27 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -1 / -1 Query: 454 SLRAAITGFASSNA 413 S RAAITGFASSNA Sbjct: 2061 SFRAAITGFASSNA 2020 Score = 49.2 bits (101), Expect(2) = 9e-12 Identities = 15/31 (48%), Positives = 24/31 (77%) Frame = -3 / -1 Query: 371 VGVFRYIWIPM*EIWHHN*ISRRSDFIGYLP 279 VG+ +W+PM EIWHHN ++++S+ + YLP Sbjct: 1290 VGIVWLVWVPMKEIWHHNEVTKQSNLVCYLP 1198 Score = 47.3 bits (97), Expect(2) = 9e-12 Identities = 25/49 (51%), Positives = 31/49 (63%) Frame = -2 / -2 Query: 831 FTVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQSL 685 FT G *T+ S + GLPQ S + L CISQ IH +G S*+SEQS+ Sbjct: 7574 FTSGIS*TNPSCLPGLPQRS*RQLHHRDCISQPIHALRRGKS*RSEQSV 7428 Score = 36.3 bits (73), Expect(4) = 7e-09 Identities = 23/47 (48%), Positives = 26/47 (55%) Frame = +1 / +3 Query: 691 LLTLSRYSLGFLMDGL*DTKVKTQVL*RVLRKPCHI*STGLARTYSE 831 LLT SR+S MDGL*DT Q+ R LRKP * G T S+ Sbjct: 7434 LLTSSRFSPA*SMDGL*DTITMMQLPSRALRKPWKT*WIGSRNT*SK 7574 Score = 35.0 bits (70), Expect(4) = 7e-09 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +1 / +2 Query: 280 GR*PIKSLRLDI*LWCQISYMGIHMYLKTPT 372 GR* + L L LWCQIS+MG H PT Sbjct: 1199 GR*QTRLLCLVTSLWCQISFMGTHTSQTIPT 1291 Score = 31.3 bits (62), Expect(4) = 7e-09 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 / +2 Query: 587 RGEMPHSCTWS*N*QNIPTRIGQAV 661 R +MP+ TW *N*Q++ TR +AV Sbjct: 2417 RSQMPNFYTWC*N*QDVSTRAVKAV 2491 Score = 26.3 bits (51), Expect(4) = 7e-09 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 410 KSI*RGKTCYCCSQRTRSIY 469 + I*RGKT YC S+ SI+ Sbjct: 2017 RGI*RGKTSYCRSKGEGSIF 2076 Score = 35.0 bits (70), Expect(3) = 2e-06 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 / +3 Query: 302 FVWIFSCGARFLTWGSI 352 FVW+ CGARF +WG I Sbjct: 1221 FVWLLRCGARFPSWGPI 1271 Score = 34.5 bits (69), Expect(3) = 2e-06 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 689 DCSLCQDIPWGFSWMDCEIQ 748 DCSL QD P +WM CEIQ Sbjct: 7432 DCSLRQDFPRRRAWMGCEIQ 7491 Score = 30.4 bits (60), Expect(3) = 2e-06 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = +1 / +1 Query: 595 NAP*LYLELKLTKHPHQNWSSSSSRFCPLT 684 NA LYL LKLT+ HQ+ SS SR LT Sbjct: 2425 NAQFLYLVLKLTRRLHQSC*SSLSRSFLLT 2514
>LOC_Os08g14000:12008.t01276:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 3610 Score = 62.5 bits (130), Expect(6) = 3e-47 Identities = 22/47 (46%), Positives = 37/47 (78%) Frame = +3 / +2 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 + +F +IFPGV+HG+ RY + + AV++AE++L+ M+DWF K+L+* Sbjct: 3215 VDYFARIFPGVAHGFACRYNASNPFAVRTAEQSLALMLDWFEKHLK* 3355 Score = 53.8 bits (111), Expect(6) = 3e-47 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +3 / +2 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KA E++KP+ AALK +G S VG GYCWG K Sbjct: 2351 KAAEDSKPIFAALKREGKSVVGVGGYCWGGK 2443 Score = 50.1 bits (103), Expect(6) = 3e-47 Identities = 20/29 (68%), Positives = 21/29 (72%) Frame = +3 / +2 Query: 267 APNLRKIADKVASSGYLVVVPDFLHGDPY 353 A N RKIADKV +GY VVVPDF G PY Sbjct: 2120 ADNYRKIADKVGEAGYYVVVPDFFQGRPY 2206 Score = 46.0 bits (94), Expect(6) = 3e-47 Identities = 20/35 (57%), Positives = 23/35 (65%) Frame = +3 / +1 Query: 156 GGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 G G VV + GG AYV+GA S A+VL SDVFG Sbjct: 196 GEAGVVVQNLGGFAAYVTGAAHSGRAIVLASDVFG 300 Score = 43.2 bits (88), Expect(6) = 3e-47 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 / +2 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVL 674 +VKCPI +LGAE D +PP LV QF L Sbjct: 2813 DVKCPIEILGAENDAVTPPRLVYQFVNAL 2899 Score = 41.8 bits (85), Expect(6) = 3e-47 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = +3 / +2 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K+ E+AK NE+ A V+SHPS VT +D+K Sbjct: 2603 KLAVEVAKTNEVGAIVISHPSSVTADDMK 2689 Score = 40.9 bits (83), Expect(3) = 3e-12 Identities = 18/24 (75%), Positives = 18/24 (75%) Frame = -1 / -2 Query: 349 GSPCKKSGTTTKYPDEATLSAIFL 278 G P KKSGTTT YP TLSAIFL Sbjct: 2202 GRPWKKSGTTT*YPASPTLSAIFL 2131 Score = 40.5 bits (82), Expect(3) = 3e-12 Identities = 22/46 (47%), Positives = 25/46 (54%) Frame = -1 / -2 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 H + NQS I R SA+ TA LYL P* TPG IL K*+ Sbjct: 3354 HFKCFSNQSSIKARDCSAVLTANGLLALYLQAKP*ATPGKILAK*S 3217 Score = 36.3 bits (73), Expect(3) = 3e-12 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -1 / -2 Query: 664 SNCLTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCD 551 +N TN GG S SAP +MGH TS+ S K+ D Sbjct: 2889 TNWYTNLGGVTASFSAPRISMGHLTSVSRSFWNKKNRD 2776 Score = 37.3 bits (75), Expect = 0.19 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -3 / -1 Query: 344 PM*EIWHHN*ISRRSDFIGYLPQI 273 P+ EIWHH+ ISR ++F+ Y P I Sbjct: 2197 PLEEIWHHDVISRFTNFVSYFPVI 2126
>LOC_Os05g33200:12005.t02915:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2886 Score = 55.6 bits (115), Expect(6) = 2e-44 Identities = 21/46 (45%), Positives = 29/46 (63%) Frame = +3 / +1 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ 827 + HFVK FP H + RY + D AVK+AEEA + M+ WF + L+ Sbjct: 2722 VDHFVKTFPKAPHAFACRYNASDPFAVKTAEEARADMVQWFDEYLK 2859 Score = 51.9 bits (107), Expect(6) = 2e-44 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = +3 / +2 Query: 279 RKIADKVASSGYLVVVPDFLHGDPYVPENA 368 R+IADKVA SGY VVVPD L+GDPY + A Sbjct: 1379 RQIADKVAYSGYYVVVPDLLYGDPYTDDPA 1468 Score = 51.0 bits (105), Expect(6) = 2e-44 Identities = 17/32 (53%), Positives = 26/32 (81%) Frame = +3 / +1 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKV 506 +A E+ KP+IA LK++G+S+VG GYCWG ++ Sbjct: 1744 EAAEKTKPLIAVLKKEGMSSVGVGGYCWGGEL 1839 Score = 46.0 bits (94), Expect(6) = 2e-44 Identities = 17/40 (42%), Positives = 26/40 (65%) Frame = +3 / +1 Query: 141 TLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 T G G+VV +GG+ YV+G+R S A++L+SD +G Sbjct: 163 TEKTGGEAGEVVHDYGGLECYVTGSRRSGRAIILVSDYYG 282 Score = 41.8 bits (85), Expect(6) = 2e-44 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +3 / +3 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 EVK PI +LG E D +PP +V QFE L N+ ++ Sbjct: 2469 EVKRPIEILGGERDTITPPLVVHQFEHALDQNNRVS 2576 Score = 39.6 bits (80), Expect(6) = 2e-44 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +3 / +2 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDI 584 KV EL+K E A V+SHPS VTV D+ Sbjct: 2006 KVAVELSKTEETQAVVISHPSLVTVHDM 2089 Score = 41.8 bits (85), Expect(5) = 1e-19 Identities = 22/35 (62%), Positives = 23/35 (65%) Frame = -1 / -1 Query: 367 AFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGAS 263 A S GSP KSGTTT YP+ ATLSAI L AS Sbjct: 1467 AGSSV*GSPYNKSGTTT*YPEYATLSAICLLTQAS 1363 Score = 40.9 bits (83), Expect(5) = 1e-19 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -3 / -1 Query: 515 LSNHLCTPAITCSPNSRYSLFFESSNNRFCLFKCF 411 L+ L TPAIT +PN + ++ N RF LF CF Sbjct: 1848 LTE*LTTPAITSNPNRGHPFLLQNRNERFSLFSCF 1744 Score = 36.8 bits (74), Expect(5) = 1e-19 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 / -1 Query: 595 FTSLISSTVTKEGCDITAAWIS 530 F ++S TVT EGC++T AW+S Sbjct: 2100 FVPVMSCTVTSEGCEMTTAWVS 2035 Score = 32.2 bits (64), Expect(5) = 1e-19 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 673 RTCSNCLTNSGGDVLSISAPSTAMGHFTS 587 + CSN T SGG ++S S P ++G TS Sbjct: 2554 KACSNWCTTSGGVMVSRSPPRISIGRLTS 2468 Score = 29.5 bits (58), Expect(5) = 1e-19 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -1 / -2 Query: 823 RFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 R+ N + RASSA+ TA S LYL G + TK*+ Sbjct: 2855 RYSSNHWTMSARASSAVLTANGSLALYLQAKAWGALGKVFTK*S 2724
>LOC_Os08g14020:12008.t01278:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 4121 Score = 62.9 bits (131), Expect(6) = 3e-43 Identities = 24/47 (51%), Positives = 35/47 (74%) Frame = +3 / +1 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 + +F +IFPGVSHG+ RY + + AV +AE+AL+ M+DWF K L+* Sbjct: 3694 VDYFARIFPGVSHGFACRYNASNQFAVNTAEQALALMLDWFEKYLK* 3834 Score = 50.6 bits (104), Expect(6) = 3e-43 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 / +2 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KA E+AK + AALK +G S +G GYCWG K Sbjct: 2636 KAAEDAKSIFAALKREGKSVIGIGGYCWGGK 2728 Score = 47.3 bits (97), Expect(6) = 3e-43 Identities = 18/27 (66%), Positives = 19/27 (70%) Frame = +3 / +1 Query: 273 NLRKIADKVASSGYLVVVPDFLHGDPY 353 N R ADKV +GY VVVPDF HG PY Sbjct: 2158 NYRDNADKVGEAGYYVVVPDFFHGQPY 2238 Score = 44.1 bits (90), Expect(6) = 3e-43 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +3 / +1 Query: 591 VKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHF 701 VKCPI +LG + D +PP LV QF VL + ++ F Sbjct: 3100 VKCPIEILGGQNDPITPPSLVDQFVNVLRQTTEVSFF 3210 Score = 40.5 bits (82), Expect(6) = 3e-43 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +3 / +2 Query: 498 AKVVAELAKANEIHAAVMSHPSFVTVEDIK 587 AK E+AK NE+ A V+SHPS V +D+K Sbjct: 2879 AKFAVEVAKTNEVEAIVISHPSEVIADDMK 2968 Score = 39.1 bits (79), Expect(6) = 3e-43 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +3 / +1 Query: 141 TLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 T + G G V+D G AYV+G S A++L SD++G Sbjct: 130 TADGDGEAGVVIDDLAGFPAYVTGDVHSGRAIILASDIYG 249 Score = 45.5 bits (93), Expect(4) = 8e-10 Identities = 23/46 (50%), Positives = 28/46 (60%) Frame = -1 / -1 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 H ++ NQS I RA SA+ TA LYL P*+TPG IL K*+ Sbjct: 3833 HFKYFSNQSSIKARACSAVLTANWLLALYLQAKP*DTPGKILAK*S 3696 Score = 36.3 bits (73), Expect(4) = 8e-10 Identities = 16/24 (66%), Positives = 17/24 (70%) Frame = -1 / -1 Query: 349 GSPCKKSGTTTKYPDEATLSAIFL 278 G P KKSGTTT YP TLSA+ L Sbjct: 2234 GCPWKKSGTTT*YPASPTLSALSL 2163 Score = 24.4 bits (47), Expect(4) = 8e-10 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 / -3 Query: 674 QNLLELLDQFWWGCFVNFSSKYSYGAF 594 Q++ +L+ Q WW V +SK GAF Sbjct: 3183 QHIHKLVHQTWWCYRVILTSKDFNGAF 3103 Score = 23.1 bits (44), Expect(4) = 8e-10 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = -1 / -3 Query: 286 IFLRFGASNPKTSEMRTTAA 227 ++L GASNP+ +++ T A Sbjct: 342 LYLSNGASNPEETKLTATTA 283
>LOC_Os11g17480:12011.t01526:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 3631 Score = 62.5 bits (130), Expect(6) = 2e-42 Identities = 24/47 (51%), Positives = 36/47 (76%) Frame = +3 / +3 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 + +FV+IFP VSHG+ RY + + AVK+A++AL+ M+DWF K L+* Sbjct: 3270 VDYFVRIFPDVSHGFACRYNASNQFAVKTAQQALALMLDWFEKYLK* 3410 Score = 50.6 bits (104), Expect(6) = 2e-42 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 / +2 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KA E+AK + AALK +G S +G GYCWG K Sbjct: 2243 KAAEDAKSIFAALKREGKSVIGIGGYCWGGK 2335 Score = 49.6 bits (102), Expect(6) = 2e-42 Identities = 19/30 (63%), Positives = 21/30 (70%) Frame = +3 / +1 Query: 264 EAPNLRKIADKVASSGYLVVVPDFLHGDPY 353 +A N R ADKV +GY VVVPDF HG PY Sbjct: 1756 DADNYRDNADKVGEAGYYVVVPDFFHGQPY 1845 Score = 41.8 bits (85), Expect(6) = 2e-42 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +3 / +3 Query: 591 VKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 VKCPI +LG + D +PP LV QF VL + ++ Sbjct: 2703 VKCPIEILGGQNDHITPPSLVDQFVNVLRQTTEVS 2807 Score = 40.5 bits (82), Expect(6) = 2e-42 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +3 / +2 Query: 498 AKVVAELAKANEIHAAVMSHPSFVTVEDIK 587 AK E+AK NE+ A V+SHPS V +D+K Sbjct: 2483 AKFAVEVAKTNEVEAIVISHPSEVIADDMK 2572 Score = 35.9 bits (72), Expect(6) = 2e-42 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 / +1 Query: 165 GKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 G V+D G AYV+G S A+++ SD++G Sbjct: 154 GVVIDDLAGFPAYVTGDVHSGRAIIVASDIYG 249 Score = 40.5 bits (82), Expect(3) = 2e-08 Identities = 22/46 (47%), Positives = 27/46 (58%) Frame = -1 / -1 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 H ++ NQS I RA A+ TA LYL P*+T G ILTK*+ Sbjct: 3409 HFKYFSNQSSIKARAC*AVLTANWLLALYLQAKP*DTSGKILTK*S 3272 Score = 38.2 bits (77), Expect(3) = 2e-08 Identities = 18/29 (62%), Positives = 19/29 (65%) Frame = -1 / -3 Query: 349 GSPCKKSGTTTKYPDEATLSAIFLRFGAS 263 G P KKSGTTT YP TLSA+ L AS Sbjct: 1841 GCPWKKSGTTT*YPASPTLSALSL*LSAS 1755 Score = 25.8 bits (50), Expect(3) = 2e-08 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 / -3 Query: 674 QNLLELLDQFWWGCFVNFSSKYSYGAF 594 Q++ +L+ Q WW V +SK GAF Sbjct: 2786 QHIHKLVHQTWWCYMVILTSKDFNGAF 2706
>LOC_Os08g14109:12008.t01286:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 8597 Score = 59.7 bits (124), Expect(6) = 2e-41 Identities = 23/47 (48%), Positives = 34/47 (72%) Frame = +3 / +1 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 I +F K+F GV+HG+ RY + + VK AE+AL+ M+DWF K+L+* Sbjct: 8158 IDYFAKVFQGVNHGFACRYNASNPFEVKKAEQALALMLDWFHKHLK* 8298 Score = 51.5 bits (106), Expect(6) = 2e-41 Identities = 20/29 (68%), Positives = 21/29 (72%) Frame = +3 / +2 Query: 267 APNLRKIADKVASSGYLVVVPDFLHGDPY 353 A N RKIADKV +GY VVVPD HG PY Sbjct: 6227 ADNFRKIADKVGLAGYYVVVPDLFHGQPY 6313 Score = 51.0 bits (105), Expect(6) = 2e-41 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +3 / +1 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KA E+AKP+ AAL ++G S VG GYCWG + Sbjct: 6673 KAAEDAKPIFAALSKEGKSIVGVGGYCWGGE 6765 Score = 42.3 bits (86), Expect(6) = 2e-41 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +3 / +3 Query: 132 DPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 D T G G VV GG AYV+GA S+ ++L +D+FG Sbjct: 147 DLTTAGGGGEAGVVVHDLGGFEAYVTGAVHSRRTILLATDIFG 275 Score = 40.5 bits (82), Expect(6) = 2e-41 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +3 / +3 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K E+AK NE+ A V+SHP+ VT +D+K Sbjct: 6936 KFAVEVAKTNEVEAIVISHPAAVTADDMK 7022 Score = 38.6 bits (78), Expect(6) = 2e-41 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +3 / +3 Query: 582 IKEVKCPIAVLGAEIDKTSPPELVKQFEQVL 674 + EVK PI +LGA+ D +PP LV QF L Sbjct: 7113 LTEVKWPIEILGAQNDTVTPPRLVYQFVHAL 7205 Score = 42.3 bits (86), Expect(2) = 2e-05 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = -1 / -3 Query: 364 FSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGAS 263 +S G P KSGTTT YP TLSAIFL+ A+ Sbjct: 6324 WSNV*GCPWNKSGTTT*YPARPTLSAIFLKLSAT 6223 Score = 32.7 bits (65), Expect(2) = 2e-05 Identities = 20/48 (41%), Positives = 24/48 (50%) Frame = -1 / -1 Query: 832 IHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AI 689 +H + L NQS I A SA T+ LYL P TP L K*+I Sbjct: 8300 LHFKCL*NQSSINASACSAFLTSKGLLALYLQAKPWFTP*KTLAK*SI 8157
>LOC_Os11g17504:12011.t01528:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 4905 Score = 60.2 bits (125), Expect(7) = 4e-40 Identities = 23/47 (48%), Positives = 35/47 (74%) Frame = +3 / +2 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 I + KIFPGVSHG+ RY + D A+++ ++AL+ M+DWF K+L+* Sbjct: 4556 IDFYAKIFPGVSHGFAGRYNTSDPFALETGKQALALMLDWFQKHLK* 4696 Score = 50.6 bits (104), Expect(7) = 4e-40 Identities = 19/29 (65%), Positives = 22/29 (75%) Frame = +3 / +2 Query: 264 EAPNLRKIADKVASSGYLVVVPDFLHGDP 350 +A N R+IADKV +GY VVVPD HGDP Sbjct: 2489 DADNYRQIADKVGDAGYYVVVPDLFHGDP 2575 Score = 42.3 bits (86), Expect(7) = 4e-40 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 / +1 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 K E+AK + A L+ +G S VG GYCWG + Sbjct: 3631 KEAEKAKSIFAFLRNEGKSLVGVGGYCWGGE 3723 Score = 40.0 bits (81), Expect(7) = 4e-40 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = +3 / +1 Query: 156 GGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 G G VV G AYV+GA S A+VL SDV+G Sbjct: 151 GEAGVVVHDLAGYEAYVTGAAHSGRAIVLASDVYG 255 Score = 39.6 bits (80), Expect(7) = 4e-40 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +3 / +3 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K E+AK NE+ A V+SHP VT +D+K Sbjct: 3861 KFAVEVAKTNEVEAVVISHPYAVTADDMK 3947 Score = 36.3 bits (73), Expect(7) = 4e-40 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 / +1 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 EVK PI +LG + D +PP LV Q+ L + ++ Sbjct: 4039 EVKWPIEILGGQNDTVTPPRLVYQYVHALRQRNDVS 4146 Score = 24.4 bits (47), Expect(7) = 4e-40 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 / +1 Query: 120 QCCADPPTLNPAGGEGKVV 176 QC PP + GGE VV Sbjct: 112 QCFEHPPDMKAGGGEAGVV 168 Score = 38.2 bits (77), Expect(2) = 2e-04 Identities = 19/29 (65%), Positives = 19/29 (65%) Frame = -1 / -1 Query: 349 GSPCKKSGTTTKYPDEATLSAIFLRFGAS 263 GSP KSGTTT YP TLSAI L AS Sbjct: 2574 GSP*NKSGTTT*YPASPTLSAICL*LSAS 2488 Score = 32.7 bits (65), Expect(2) = 2e-04 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -1 / -1 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNIL 704 H + NQS I RA + A S +LY +P ETPG IL Sbjct: 4695 HFKCF*NQSSIKARACFPVSRANGSLVLYRPANPWETPGKIL 4570
>LOC_Os11g17540:12011.t01532:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 3860 Score = 62.5 bits (130), Expect(5) = 2e-37 Identities = 22/47 (46%), Positives = 37/47 (78%) Frame = +3 / +1 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 + +F +IFPGV+HG+ RY + + AV++AE++L+ M+DWF K+L+* Sbjct: 3373 VDYFARIFPGVAHGFACRYNASNPFAVRTAEQSLALMLDWFEKHLK* 3513 Score = 51.0 bits (105), Expect(5) = 2e-37 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 / +1 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 KA E++KP+ AALK +G VG GYCWG K Sbjct: 2509 KAAEDSKPIFAALKREGKYVVGVGGYCWGGK 2601 Score = 46.4 bits (95), Expect(5) = 2e-37 Identities = 19/29 (65%), Positives = 20/29 (68%) Frame = +3 / +1 Query: 267 APNLRKIADKVASSGYLVVVPDFLHGDPY 353 A N RKIADKV +GY VVVPDF PY Sbjct: 2278 ADNYRKIADKVGEAGYYVVVPDFFQRRPY 2364 Score = 43.2 bits (88), Expect(5) = 2e-37 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 / +1 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVL 674 +VKCPI +LGAE D +PP LV QF L Sbjct: 2971 DVKCPIEILGAENDAVTPPRLVYQFVNAL 3057 Score = 41.8 bits (85), Expect(5) = 2e-37 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = +3 / +1 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K+ E+AK NE+ A V+SHPS VT +D+K Sbjct: 2761 KLAVEVAKTNEVGAIVISHPSSVTADDMK 2847 Score = 40.5 bits (82), Expect(3) = 2e-11 Identities = 22/46 (47%), Positives = 25/46 (54%) Frame = -1 / -1 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 H + NQS I R SA+ TA LYL P* TPG IL K*+ Sbjct: 3512 HFKCFSNQSSIKARDCSAVLTANGLLALYLQAKP*ATPGKILAK*S 3375 Score = 37.3 bits (75), Expect(3) = 2e-11 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 / -1 Query: 673 RTCSNCLTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCD 551 + +N TN GG S SAP +MGH TS+ S K+ D Sbjct: 3056 KALTNWYTNLGGVTASFSAPRISMGHLTSVSRSIWNKKNRD 2934 Score = 37.3 bits (75), Expect(3) = 2e-11 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -3 / -3 Query: 344 PM*EIWHHN*ISRRSDFIGYLPQI 273 P+ EIWHH+ ISR ++F+ Y P I Sbjct: 2355 PLEEIWHHDVISRFTNFVSYFPVI 2284 Score = 36.3 bits (73), Expect = 0.37 Identities = 16/20 (80%), Positives = 16/20 (80%) Frame = -1 / -1 Query: 337 KKSGTTTKYPDEATLSAIFL 278 KKSGTTT YP TLSAIFL Sbjct: 2348 KKSGTTT*YPASPTLSAIFL 2289
>LOC_Os08g14090:12008.t01285:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2294 Score = 59.7 bits (124), Expect(5) = 4e-33 Identities = 23/47 (48%), Positives = 33/47 (70%) Frame = +3 / +3 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 I +F K+F GV+HG+ RY + + VK AE+AL M+DWF K+L+* Sbjct: 2154 IDYFAKVFQGVNHGFACRYNASNPFEVKKAEQALDLMVDWFHKHLK* 2294 Score = 56.5 bits (117), Expect(5) = 4e-33 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = +3 / +3 Query: 264 EAPNLRKIADKVASSGYLVVVPDFLHGDPY 353 +A N RKIADKV +GY V VPDF HGDPY Sbjct: 135 DAENYRKIADKVGQAGYYVAVPDFFHGDPY 224 Score = 43.2 bits (88), Expect(5) = 4e-33 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = +3 / +1 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVL 674 EVKCPI ++GA+ D +PP+LV Q+ Q L Sbjct: 1237 EVKCPIEIIGAQNDTLTPPKLVYQYVQAL 1323 Score = 41.8 bits (85), Expect(5) = 4e-33 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +3 / +1 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K E+AK NE+ A V +HP VTV+DIK Sbjct: 1024 KFAVEVAKTNEVEAIVTTHPGLVTVDDIK 1110 Score = 25.4 bits (49), Expect(5) = 4e-33 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +3 / +3 Query: 450 KEQGVSTVGAAGYCWGAK 503 + +G G GYCWG + Sbjct: 549 ERKGYLLFGVGGYCWGGE 602 Score = 43.7 bits (89), Expect(4) = 9e-11 Identities = 21/29 (72%), Positives = 21/29 (72%) Frame = -1 / -2 Query: 349 GSPCKKSGTTTKYPDEATLSAIFLRFGAS 263 GSP KKSGT T YP TLSAIFL F AS Sbjct: 220 GSPWKKSGTAT*YPA*PTLSAIFL*FSAS 134 Score = 37.3 bits (75), Expect(4) = 9e-11 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -1 / -2 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AI 689 H + L NQS I RA SA T+ LYL +P TP L K*+I Sbjct: 2293 HFKCL*NQSTIKSRACSAFLTSNGLLALYLQANPWFTPWKTLAK*SI 2153 Score = 26.7 bits (52), Expect(4) = 9e-11 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -2 / -2 Query: 669 PARTA*PILVGMFCQFQLQVQLWGISPL 586 P T ILV C+ +LQ WGI PL Sbjct: 1318 PEHTGTLILVVSVCRSELQ*SQWGI*PL 1235 Score = 22.6 bits (43), Expect(4) = 9e-11 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = -3 / -2 Query: 479 SPNSRYSLFFESSNNRFCLFKCF 411 +PN+RY + F +F CF Sbjct: 577 TPNNRYPFLS*IRKDCFSIFSCF 509
>LOC_Os08g14030:12008.t004304:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 8526 Score = 61.6 bits (128), Expect(7) = 1e-32 Identities = 24/47 (51%), Positives = 35/47 (74%) Frame = +3 / +3 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 I + KIFPGVSHG+ RY + D AV++ ++AL+ M+DWF K+L+* Sbjct: 8184 IDFYAKIFPGVSHGFAGRYNTSDPFAVETGKQALALMLDWFQKHLK* 8324 Score = 42.8 bits (87), Expect(7) = 1e-32 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 / +3 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAK 503 K E+AK + A L+ +G S VG GYCWG + Sbjct: 7212 KEAEKAKSIFAFLRNEGKSVVGVGGYCWGGE 7304 Score = 40.9 bits (83), Expect(7) = 1e-32 Identities = 19/35 (54%), Positives = 21/35 (60%) Frame = +3 / +1 Query: 156 GGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 G G VV G AYV+GA S AVVL SDV+G Sbjct: 151 GEAGVVVHDLAGYEAYVTGAAHSDRAVVLASDVYG 255 Score = 36.8 bits (74), Expect(7) = 1e-32 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 / +3 Query: 501 KVVAELAKANEIHAAVMSHPSFVTVEDIK 587 K +AK NE+ A V+SHP VT +D+K Sbjct: 7488 KFAVTVAKTNEVEAVVISHPYAVTADDMK 7574 Score = 36.3 bits (73), Expect(7) = 1e-32 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 / +1 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 695 EVK PI +LG + D +PP LV Q+ L + ++ Sbjct: 7666 EVKWPIEILGGQNDTVTPPRLVYQYVHALRQRNDVS 7773 Score = 27.2 bits (53), Expect(7) = 1e-32 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3 / +2 Query: 264 EAPNLRKIADKVASSGY 314 +A N R+IADKV +GY Sbjct: 2504 DADNYRQIADKVGDAGY 2554 Score = 26.7 bits (52), Expect(7) = 1e-32 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +3 / +3 Query: 318 VVVPDFLHGDP 350 VVVPD HGDP Sbjct: 2562 VVVPDLFHGDP 2594 Score = 35.4 bits (71), Expect = 0.69 Identities = 19/42 (45%), Positives = 23/42 (54%) Frame = -1 / -3 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNIL 704 H + NQS I RA + TA S +LY +P ETPG IL Sbjct: 8323 HFKCF*NQSSIKARACFPVSTANGSLVLYRPANPWETPGKIL 8198
>LOC_Os05g33190:12005.t02914:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 2756 Score = 59.7 bits (124), Expect(5) = 5e-30 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = +3 / +3 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ 827 + H VKIFP HG+ RY + D AVK+AEEA + M+ WF K L+ Sbjct: 2208 VHHLVKIFPDAPHGFACRYNATDPFAVKTAEEARADMVKWFDKYLE 2345 Score = 53.3 bits (110), Expect(5) = 5e-30 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = +3 / +3 Query: 411 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKV 506 +A E+ KP+IAALK+ G STVG GYCWG ++ Sbjct: 1314 EAAEKTKPLIAALKKDGTSTVGVGGYCWGGEL 1409 Score = 50.1 bits (103), Expect(5) = 5e-30 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +3 / +3 Query: 588 EVKCPIAVLGAEIDKTSPPELVKQFEQVLSSN 683 EVKCPI +LG E+D SPP+L+ Q E L N Sbjct: 1944 EVKCPIEILGGELDTISPPQLIHQLEDALDQN 2039 Score = 30.4 bits (60), Expect(5) = 5e-30 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +3 / +2 Query: 309 GYLVVVPDFLHGDPYVPENA 368 G VVVPD L GDPY + A Sbjct: 953 GCYVVVPDLLFGDPYTDDPA 1012 Score = 23.5 bits (45), Expect(5) = 5e-30 Identities = 6/12 (50%), Positives = 9/12 (75%) Frame = +3 / +2 Query: 372 RPIQVWLKEHAP 407 RP + W+K H+P Sbjct: 1013 RPFEEWIKTHSP 1048 Score = 43.2 bits (88), Expect(5) = 1e-14 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -3 / -1 Query: 515 LSNHLCTPAITCSPNSRYSLFFESSNNRFCLFKCFS 408 L+ L TPA+T + NSR + +S N RF LF CF+ Sbjct: 1418 LTE*LTTPAVTSNSNSRRPILLQSRNKRFSLFSCFN 1311 Score = 37.3 bits (75), Expect(5) = 1e-14 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = -1 / -2 Query: 823 RFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK* 695 R+L N + RASSA+ TA S LYL P G I TK* Sbjct: 2341 RYLSNHLTMSARASSAVLTANGSVALYLQAKPWGASGKIFTK* 2213 Score = 31.3 bits (62), Expect(5) = 1e-14 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 / -2 Query: 673 RTCSNCLTNSGGDVLSISAPSTAMGHFTS 587 + SN + GG+++S S P +MGH TS Sbjct: 2029 KASSNWCISCGGEMVSSSPPRISMGHLTS 1943 Score = 25.8 bits (50), Expect(5) = 1e-14 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -1 / -3 Query: 583 ISSTVTKEGCDITAAWIS 530 +SST T GC++T A +S Sbjct: 1842 MSSTTTSAGCEMTTALVS 1789 Score = 25.8 bits (50), Expect(5) = 1e-14 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -1 / -3 Query: 367 AFSGTYGSPCKKSGTTTKYP 308 A S GSP KSGTTT +P Sbjct: 1011 AGSSV*GSPNNKSGTTT*HP 952
>LOC_Os05g33090:12005.t02904:unspliced-genomic hypothetical protein| Length = 1493 Score = 97.3 bits (206), Expect = 2e-19 Identities = 38/47 (80%), Positives = 42/47 (89%) Frame = +3 / +3 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 I HFVKIFPGV HGWTVRYK +DA AVKSAEEAL+ MIDWF+KNL+* Sbjct: 1353 IGHFVKIFPGVEHGWTVRYKDDDAAAVKSAEEALADMIDWFNKNLK* 1493 Score = 76.7 bits (161), Expect = 3e-13 Identities = 36/47 (76%), Positives = 37/47 (78%) Frame = -1 / -2 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AI 689 H RFLLNQSI+ RASSAL TA ASS LYLTVHP TPG ILTK* I Sbjct: 1492 HLRFLLNQSIMSARASSALLTAAASSSLYLTVHPCSTPGKILTK*PI 1352 Score = 62.5 bits (130), Expect = 5e-09 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = -3 / -1 Query: 830 SL*VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSN 690 SL VL KPVDH+ QGFL L S+ + VS+ PSM +PRE LDKV+N Sbjct: 1493 SLEVLIKPVDHVCQGFLGALDSSGIVILVSYGPSMLDPREDLDKVTN 1353 Score = 57.0 bits (118), Expect = 2e-07 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = -2 / -3 Query: 828 TVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQS 688 T GS *TSRS + GLP+ S Q H CI +SIH +PQG S*QS+QS Sbjct: 1491 T*GSY*TSRSCLPGLPRRS*QQRHRHPCILRSIHARPQGRS*QSDQS 1351 Score = 56.1 bits (116), Expect = 4e-07 Identities = 25/47 (53%), Positives = 29/47 (61%) Frame = +2 / +2 Query: 689 DCSLCQDIPWGFSWMDCEIQKXXXXXXXXXXGSPVTYDRLV*QEPTV 829 D SLCQD+PWG +WMD +IQ GSP +DRLV* EP V Sbjct: 1352 DWSLCQDLPWGRAWMDRKIQG*RCRCCQERRGSPGRHDRLV**EPQV 1492 Score = 51.0 bits (105), Expect = 1e-05 Identities = 27/46 (58%), Positives = 31/46 (67%) Frame = +1 / +1 Query: 691 LLTLSRYSLGFLMDGL*DTKVKTQVL*RVLRKPCHI*STGLARTYS 828 L+TLSR SLG MDG *DT++ +L R RKP *STGL RT S Sbjct: 1354 LVTLSRSSLGSSMDGP*DTRMTMPLLSRAPRKPWQT*STGLIRTSS 1491
>LOC_Os08g13860:12008.t01262:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 4390 Score = 62.0 bits (129), Expect = 7e-09 Identities = 22/47 (46%), Positives = 36/47 (76%) Frame = +3 / +2 Query: 690 IAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 + +F +IFPGV+HG+ RY + AV++AE++L+ M+DWF K+L+* Sbjct: 4250 VDYFARIFPGVAHGFACRYNGSNPFAVRTAEQSLALMLDWFEKHLK* 4390 Score = 39.6 bits (80), Expect = 0.040 Identities = 22/46 (47%), Positives = 25/46 (54%) Frame = -1 / -2 Query: 829 HCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*A 692 H + NQS I R SA+ TA LYL P* TPG IL K*+ Sbjct: 4389 HFKCFSNQSSIKARDCSAVLTANGLLPLYLQAKP*ATPGKILAK*S 4252
>LOC_Os08g14080:12008.t01284:unspliced-genomic endo-1,3;1,4-beta-D-glucanase precursor, putative| Length = 463 Score = 40.5 bits (82), Expect(2) = 7e-05 Identities = 19/35 (54%), Positives = 21/35 (60%) Frame = +3 / +1 Query: 156 GGEGKVVDSFGGITAYVSGARESKAAVVLISDVFG 260 G G VV G AYV+GA S AV+L SDVFG Sbjct: 109 GEAGVVVHDLAGFEAYVTGAVHSTKAVLLASDVFG 213 Score = 26.3 bits (51), Expect(2) = 7e-05 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +3 / +1 Query: 120 QCCADPPTLNPAGGEGKVV 176 QC +PP L GGE VV Sbjct: 70 QCLDNPPDLTAGGGEAGVV 126
>LOC_Os08g18860:12008.t01707:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1554 Score = 43.2 bits (88), Expect(2) = 3e-04 Identities = 16/35 (45%), Positives = 27/35 (77%) Frame = +3 / +1 Query: 726 HGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 830 HG+ RY + + AV++AE++L+ M+DWF K+L+* Sbjct: 1450 HGFACRYNASNPFAVRTAEQSLALMLDWFWKHLK* 1554 Score = 25.4 bits (49), Expect(2) = 3e-04 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +3 / +2 Query: 588 EVKCPIAVLGAE 623 +VKCPI +LGA+ Sbjct: 716 DVKCPIEILGAD 751
>LOC_Os05g35470:12005.t03140:unspliced-genomic hydrolase, putative, expressed| Length = 1448 Score = 35.9 bits (72), Expect = 0.50 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 / +1 Query: 234 VVLISDVFGFEAPNLRKIADKVASSGYLVVVP 329 V+L+SDVFGFE R A +VA GY + P Sbjct: 511 VLLLSDVFGFEDSATRDFAYRVACHGYK*ITP 606
>LOC_Os07g37830:12007.t03451:unspliced-genomic peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor,| putative, expressed Length = 4876 Score = 35.4 bits (71), Expect = 0.69 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +2 / +2 Query: 872 LFTSHHVIIQGLCYRACIFGCTDLSCASMHCVITHIGLCLC 994 +F + H+ + CI CT S CV+ HI C C Sbjct: 3734 IFRTRHIR*HSILNSDCISACTSTVHPSTSCVVNHISECFC 3856
>LOC_Os04g56460:12004.t05116:unspliced-genomic ATBPM1, putative, expressed| Length = 1062 Score = 35.0 bits (70), Expect = 0.95 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 / -3 Query: 365 RRQTNTSVVKGACPGKSI*RGKTCYCCSQRTRS 463 RR T + + G G RG+TC CCS+R RS Sbjct: 298 RRGTRSRTMAGRGTGGRRRRGRTCRCCSRRGRS 200
>LOC_Os01g68390:12001.t06195:unspliced-genomic uncharacterized ACR, COG1565 family protein, expressed| Length = 4601 Score = 34.5 bits (69), Expect = 1.3 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +2 / +1 Query: 857 NTPVSLFTSHHVIIQGLCYRACIFGCTDLSCASMHCVITHIG 982 +TP S TS VI+ C+ T C S+ CV H G Sbjct: 295 STPASASTSSTVILLSTCFLDHSIAWTGFGCGSLVCVFRHCG 420
>LOC_Os01g54240:12001.t04841:unspliced-genomic nup85 Nucleoporin family protein, expressed| Length = 7833 Score = 34.5 bits (69), Expect = 1.3 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 / +2 Query: 859 YASVTLHQSSCNHPGFML*GLHLWLYRSVLC*HAL 963 YA + LH+ N G + LH +Y VLC HAL Sbjct: 5630 YADMMLHEERPNFGGISIEELHRLVYAQVLCSHAL 5734
>LOC_Os03g63260:12003.t05543:unspliced-genomic methyltransferase small domain, putative, expressed| Length = 6383 Score = 33.6 bits (67), Expect = 2.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 / +3 Query: 548 NSCMDLISFR*LSNHLCTPAITCSPNSRYSLFFESSNNRFCLFKCFSR 405 +SC S +S+H C P CS R + S+ CL KC SR Sbjct: 3060 SSCTSSFSSLAMSHHRCRPLTPCSSCMRAAPHSTSTTPAACLTKCPSR 3203
>LOC_Os12g19770:12012.t01820:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6363 Score = 33.6 bits (67), Expect = 2.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +2 / +3 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCASMHCVITHI 979 SLF S I GLC R+C++ + CAS + ++ Sbjct: 1221 SLFDSQSRIYWGLCIRSCLYSMGAMLCASFSMQLVYV 1331
>LOC_Os01g60790:12001.t05460:unspliced-genomic 40S ribosomal protein S26, putative, expressed| Length = 2208 Score = 27.6 bits (54), Expect(2) = 2.5 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = -3 / +1 Query: 506 HLCTPAITCSPNSRYSLFF 450 H C I CSP SR FF Sbjct: 2065 HACESNIVCSPKSRVCYFF 2121 Score = 23.1 bits (44), Expect(2) = 2.5 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 / +3 Query: 596 FHLFDIFNSNKRRV 555 +HLFD F S RRV Sbjct: 1986 YHLFDSFCSYSRRV 2027
>LOC_Os06g10600:12006.t00938:unspliced-genomic DNA binding protein, putative, expressed| Length = 3070 Score = 29.0 bits (57), Expect(2) = 3.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 / -2 Query: 640 HQNWSSSSSRFCPLTQGLLTLSRYS 714 H WS++S R P L T SRYS Sbjct: 1953 HARWSAASQRCAPNAAPLSTRSRYS 1879 Score = 26.3 bits (51), Expect(2) = 3.1 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +3 / -3 Query: 105 RMATPQCCADPPTLNPAGGEG 167 R A P+C + PP +P G G Sbjct: 2876 RRAAPRCWSTPPPPSPGGHRG 2814
>LOC_Os10g36990:12010.t02974:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 6175 Score = 33.1 bits (66), Expect = 3.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 / +1 Query: 810 TSRSYVTGLPQHSSQHLRLHFCISQSIHEKP 718 +S +Y TG ++SS H+ +HFC S + P Sbjct: 5293 SSATYNTGFARYSSAHILVHFCFSFCTNMSP 5385
>LOC_Os04g17740:12004.t01521:unspliced-genomic hypothetical protein| Length = 2074 Score = 32.7 bits (65), Expect = 4.7 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 / +1 Query: 342 GDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKE 455 G+P V + P+++ KE A G + AKP++ A +E Sbjct: 139 GNPLVHGDGQPPVELGTKEPAAGVELDFAKPMVVAARE 252
>LOC_Os02g45670:12002.t04154:unspliced-genomic DNA binding protein, putative, expressed| Length = 4979 Score = 32.2 bits (64), Expect = 6.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3 / +1 Query: 548 NSCMDLISFR*LSNHLCTPAITCSPNSRYSLFFESSNNRFCLFKCF 411 +SC L+ FR LC I NS +LF+ CLF CF Sbjct: 463 SSCDALVRFRCFFAVLCIIDIKQ*QNSLLNLFYVKKTKLVCLFICF 600
>LOC_Os12g29130:12012.t02623:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6369 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +3 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1227 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1313
>LOC_Os12g19750:12012.t01818:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5864 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1225 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1311
>LOC_Os11g10160:12011.t00908:unspliced-genomic hypothetical protein| Length = 13171 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / -2 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 9072 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 8986
>LOC_Os10g18200:12010.t01372:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6359 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1220 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1306
>LOC_Os09g21640:12009.t01898:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6373 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1232 SLFDSQSGIYWGLCIRSCLYSVGAMLCAS 1318
>LOC_Os07g41520:12007.t03807:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6368 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1226 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1312
>LOC_Os07g41510:12007.t03806:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6368 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1226 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1312
>LOC_Os06g35720:12006.t03269:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2327 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1225 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1311
>LOC_Os06g35710:12006.t03268:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6365 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +3 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1224 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1310
>LOC_Os06g20370:12006.t01854:unspliced-genomic microtubule-associated protein MAP65-1a, putative, expressed| Length = 4454 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -1 / -1 Query: 841 LIQIHCRFLLNQSIICDRASSALFTAPASSL 749 +IQ+ C F + S C+R SS+L + +SSL Sbjct: 1820 IIQVTCTFSFSSSCSCERNSSSLSSVKSSSL 1728
>LOC_Os05g41330:12005.t03671:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1222 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1308
>LOC_Os05g39740:12005.t03515:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6361 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1219 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1305
>LOC_Os03g29790:12003.t02593:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1222 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1308
>LOC_Os02g47540:12002.t04338:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1222 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1308
>LOC_Os01g71530:12001.t06447:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6366 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +3 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1224 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1310
>LOC_Os01g53960:12001.t04813:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1222 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1308
>LOC_Os01g36360:12001.t03184:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6378 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +1 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1237 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1323
>LOC_Os01g01240:12001.t00023:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6366 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / +3 Query: 869 SLFTSHHVIIQGLCYRACIFGCTDLSCAS 955 SLF S I GLC R+C++ + CAS Sbjct: 1224 SLFDSQSGIYWGLCIRSCLYSMGAMLCAS 1310
>LOC_Os02g54870:12002.t05065:unspliced-genomic expressed protein| Length = 1121 Score = 31.8 bits (63), Expect = 8.8 Identities = 13/41 (31%), Positives = 19/41 (46%) Frame = +3 / +1 Query: 417 FEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIH 539 F E K I + ++ A CW + AELA+A + H Sbjct: 142 FHERKSAIKRAADAALAAARGAAPCWSRSLAAELAQAPQQH 264 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 382,272,990 Number of extensions: 5511005 Number of successful extensions: 23172 Number of sequences better than 10.0: 47 Length of query: 355 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 305 Effective length of database: 52,799,986 Effective search space: 16103995730 Effective search space used: 16103995730 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
