ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001062009.1| Oryza sativa (japonica cultivar-group) Os05g... 591 e-165
2dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 591 e-165
3dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 581 e-162
4dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 581 e-162
5gb|AY104092.1| Zea mays PCO081688 mRNA sequence 260 9e-66
6gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 216 1e-52
7gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 176 1e-40
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40
9emb|CT831040.1| Oryza sativa (indica cultivar-group) cDNA clone:... 133 1e-27
10ref|NM_001062010.1| Oryza sativa (japonica cultivar-group) Os05g... 123 1e-24
11dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 1e-24
12gb|AY104719.1| Zea mays PCO136367 mRNA sequence 48 0.065
13gb|AF072326.1|AF072326 Zea mays endo-1,3-1,4-beta-D-glucanase mR... 48 0.065
14emb|CT833276.1| Oryza sativa (indica cultivar-group) cDNA clone:... 46 0.26
15ref|NM_001062014.1| Oryza sativa (japonica cultivar-group) Os05g... 46 0.26
16gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, comp... 46 0.26
17gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.26
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 46 0.26
19gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence 46 0.26
20gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, com... 46 0.26
21gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, com... 46 0.26
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.26
23gb|AC129918.10| Homo sapiens chromosome 8, clone CTD-2132E17, co... 46 0.26
24dbj|AK107541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.26
25gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 44 1.0
26gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, compl... 44 1.0
27emb|CR788230.8| Zebrafish DNA sequence from clone DKEY-57I11 in ... 42 4.0
28gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, com... 42 4.0
29ref|XM_540104.2| PREDICTED: Canis familiaris similar to tudor do... 42 4.0
30gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosom... 42 4.0
31dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 42 4.0
32emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, comp... 42 4.0
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 4.0
34gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene,... 42 4.0
35gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, co... 42 4.0
36gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence 42 4.0
37emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, c... 42 4.0

>ref|NM_001062009.1| Oryza sativa (japonica cultivar-group) Os05g0399100 (Os05g0399100)
           mRNA, partial cds
          Length = 1125
 Score =  591 bits (298), Expect = e-165
 Identities = 619/726 (85%)
 Strand = Plus / Plus

                                                                       
Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
           |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 214 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 273

                                                                       
Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
            ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 274 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 333

                                                                       
Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 334 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 393

                                                                       
Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346
           |||||| ||||| || ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 394 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 453

                                                                       
Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406
           ||| |  ||||||||||   | || | |||  | ||| ||||| |||| || |||| |||
Sbjct: 454 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 513

                                                                       
Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466
           ||  ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| ||
Sbjct: 514 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 573

                                                                       
Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526
           || | ||||||||| ||||||||||||||||||||||||||| |  ||| ||| ||||||
Sbjct: 574 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 633

                                                                       
Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586
           | |||||||||| || ||||| ||||  ||||| |||||||| |||||||| ||||| ||
Sbjct: 634 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 693

                                                                       
Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
           |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 694 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 753

                                                                       
Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706
           | |||| |||||||||||||||||||| || || || ||||||||||  |||||||||||
Sbjct: 754 agtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 813

                                                                       
Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766
           ||| ||||||||||||   ||||||||||||||||||||||| | ||| || |||| |||
Sbjct: 814 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 873

                                                                       
Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacctaca 826
           ||| ||||| || |||||||||||| |  | ||||| ||||||||||  ||||||||  |
Sbjct: 874 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 933

                 
Query: 827 gtgaat 832
           ||||||
Sbjct: 934 gtgaat 939



to top

>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  591 bits (298), Expect = e-165
 Identities = 619/726 (85%)
 Strand = Plus / Plus

                                                                       
Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
           |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 32  gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 91

                                                                       
Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
            ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 92  gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 151

                                                                       
Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 152 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 211

                                                                       
Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346
           |||||| ||||| || ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 212 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 271

                                                                       
Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406
           ||| |  ||||||||||   | || | |||  | ||| ||||| |||| || |||| |||
Sbjct: 272 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 331

                                                                       
Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466
           ||  ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| ||
Sbjct: 332 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 391

                                                                       
Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526
           || | ||||||||| ||||||||||||||||||||||||||| |  ||| ||| ||||||
Sbjct: 392 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 451

                                                                       
Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586
           | |||||||||| || ||||| ||||  ||||| |||||||| |||||||| ||||| ||
Sbjct: 452 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 511

                                                                       
Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
           |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 512 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 571

                                                                       
Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706
           | |||| |||||||||||||||||||| || || || ||||||||||  |||||||||||
Sbjct: 572 agtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 631

                                                                       
Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766
           ||| ||||||||||||   ||||||||||||||||||||||| | ||| || |||| |||
Sbjct: 632 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 691

                                                                       
Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacctaca 826
           ||| ||||| || |||||||||||| |  | ||||| ||||||||||  ||||||||  |
Sbjct: 692 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 751

                 
Query: 827 gtgaat 832
           ||||||
Sbjct: 752 gtgaat 757



to top

>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  581 bits (293), Expect = e-162
 Identities = 611/717 (85%)
 Strand = Plus / Plus

                                                                       
Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
           |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 216 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 275

                                                                       
Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
            ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 276 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 335

                                                                       
Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 336 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 395

                                                                       
Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346
           |||||| ||||| || ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 396 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 455

                                                                       
Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406
           ||| |  ||||||||||   | || | |||  | ||| ||||| |||| || |||| |||
Sbjct: 456 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 515

                                                                       
Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466
           ||  ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| ||
Sbjct: 516 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 575

                                                                       
Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526
           || | ||||||||| ||||||||||||||||||||||||||| |  ||| ||| ||||||
Sbjct: 576 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 635

                                                                       
Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586
           | |||||||||| || ||||| ||||  ||||| |||||||| |||||||| ||||| ||
Sbjct: 636 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 695

                                                                       
Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
           |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 696 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 755

                                                                       
Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706
           | |||  |||||||||||||||||||| || || || ||||||||||  |||||||||||
Sbjct: 756 agtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 815

                                                                       
Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766
           ||| ||||||||||||   ||||||||||||||||||||||| | ||| || |||| |||
Sbjct: 816 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 875

                                                                    
Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacct 823
           ||| ||||| || |||||||||||| |  | ||||| ||||||||||  ||||||||
Sbjct: 876 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacct 932



to top

>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  581 bits (293), Expect = e-162
 Identities = 611/717 (85%)
 Strand = Plus / Plus

                                                                       
Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
           |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 216 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 275

                                                                       
Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
            ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 276 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 335

                                                                       
Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 336 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 395

                                                                       
Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346
           |||||| ||||| || ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 396 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 455

                                                                       
Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406
           ||| |  ||||||||||   | || | |||  | ||| ||||| |||| || |||| |||
Sbjct: 456 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 515

                                                                       
Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466
           ||  ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| ||
Sbjct: 516 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 575

                                                                       
Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526
           || | ||||||||| ||||||||||||||||||||||||||| |  ||| ||| ||||||
Sbjct: 576 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 635

                                                                       
Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586
           | |||||||||| || ||||| ||||  ||||| |||||||| |||||||| ||||| ||
Sbjct: 636 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 695

                                                                       
Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
           |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 696 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 755

                                                                       
Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706
           | |||  |||||||||||||||||||| || || || ||||||||||  |||||||||||
Sbjct: 756 agtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 815

                                                                       
Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766
           ||| ||||||||||||   ||||||||||||||||||||||| | ||| || |||| |||
Sbjct: 816 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 875

                                                                    
Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacct 823
           ||| ||||| || |||||||||||| |  | ||||| ||||||||||  ||||||||
Sbjct: 876 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacct 932



to top

>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score =  260 bits (131), Expect = 9e-66
 Identities = 540/673 (80%), Gaps = 5/673 (0%)
 Strand = Plus / Plus

                                                                        
Query: 120  cagtgctgcgcggacccgccgacgctcaaccccgccggcggcgagggcaaggtcgtggac 179
            ||||||||||   |||||||| | || ||||| ||| |||| |||||||||||||| |||
Sbjct: 330  cagtgctgcgataacccgccggccctgaacccggcctgcggggagggcaaggtcgtcgac 389

                                                                        
Query: 180  agcttcggcgggatcacggcgtacgtctccggcgcccga-gagtccaaggccgccgtcgt 238
            |||||||||||| ||| ||| |||||| ||||| ||||| || |||||||||||||||||
Sbjct: 390  agcttcggcgggctcaaggcctacgtcgccggc-cccgaggactccaaggccgccgtcgt 448

                                                                        
Query: 239  cctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagatagccgataaagt 298
            |||| |  ||||||||||||| || |||||||||| ||||||||| |||||||| |||||
Sbjct: 449  cctcgttgccgacgtcttcggattcgaagcgccgattctgaggaacatagccgacaaagt 508

                                                                        
Query: 299  cgcttcgtctggatatttagttgtggtgccagatttcttacatggggatccatatgtacc 358
             |||||||| || || || |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 509  tgcttcgtcagggtactttgttgtggtaccagatttctttcatggggatccttatgtacc 568

                                                                        
Query: 359  tgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgccccgggaaaagcatt 418
            ||| || || || |  |  ||||  |||||| | |||   ||| | |||| |||||  ||
Sbjct: 569  tgagaatgctgagaagctcatacctgtgtggctgaagtcacatactccggaaaaagggtt 628

                                                                        
Query: 419  tgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgttggggc 478
            ||||||||||||||| |||||||| ||||| || ||  | ||||| ||| | ||||| ||
Sbjct: 629  tgaagaggcaaaaccagttattgcggctctaaaggagaagggagtgtctgccgttggagc 688

                                                                        
Query: 479  tgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgagatcc- 537
            |||||| |||||||||||||||||||| ||||  ||| | || ||||| |||||| ||| 
Sbjct: 689  tgcagggtattgctggggtgcaaaggtcgttgtggagttggcaaaagcaaatgagctcct 748

                                                                        
Query: 538  --atgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtgaa 595
              | || |||||  |||  ||||||||||||||||| ||  | |||||||||||||| ||
Sbjct: 749  caaggctgctgtactgttgcacccttcttttgttaccgtctacgatatcaaagaggtcaa 808

                                                                        
Query: 596  atgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtcaa 655
            |||| | ||  || ||||||||||||| || ||    |  ||||||||||| || |||||
Sbjct: 809  atgctcaatctctatacttggagctgagatggatgtgaggtccccaccagagttagtcaa 868

                                                                        
Query: 656  gcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattccc 715
            ||| |||||||| |  || ||    ||||||||| ||| |||||| |||||| | |||||
Sbjct: 869  gcaattcgagcaagccctttctgtgaactcaggggttggtcacttcgtcaaggtcttccc 928

                                                                        
Query: 716  tggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaagag 775
            ||| ||  | ||||| ||||  ||||||||||     || || |||| ||| ||||||||
Sbjct: 929  tggcgtggcgcatgggtggagcgtgagatacagcctcgatgatgcagctgccgtgaagag 988

                         
Query: 776  tgctgaggaagcc 788
             ||||||||||||
Sbjct: 989  cgctgaggaagcc 1001



to top

>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score =  216 bits (109), Expect = 1e-52
 Identities = 291/349 (83%), Gaps = 2/349 (0%)
 Strand = Plus / Plus

                                                                       
Query: 163 agggcaaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccga-gag 221
           ||||||||||||| ||||||||||||||| ||| ||| |||||| ||||| ||||| || 
Sbjct: 254 agggcaaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggc-cccgaggac 312

                                                                       
Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281
           ||||||||||||||||||||| |  ||||||||||||| || |||||||||| |||||||
Sbjct: 313 tccaaggccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattctgagg 372

                                                                       
Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341
           || |||||||| ||||| |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 373 aacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcat 432

                                                                       
Query: 342 ggggatccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcat 401
           |||||||| ||||||||||| || || || |  |  ||||  |||||| | |||   |||
Sbjct: 433 ggggatccttatgtacctgagaatgctgagaagctcatacctgtgtggctgaagtcacat 492

                                                                       
Query: 402 gccccgggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaagga 461
            | |||| |||||  ||||||||||||||||| ||||| || ||||| || ||  | |||
Sbjct: 493 actccggaaaaagggtttgaagaggcaaaaccagttatcgcggctctaaaggagaaggga 552

                                                            
Query: 462 gtatctactgttggggctgcaggttattgctggggtgcaaaggtggttg 510
           || ||| | ||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 553 gtgtctgccgttggagctgcagggtattgctggggtgcaaaggtcgttg 601



to top

>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  176 bits (89), Expect = 1e-40
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                         
Query: 107   gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
             |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 69627 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 69686

                                                                         
Query: 167   caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
              ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 69687 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 69746

                                              
Query: 227   ggccgccgtcgtcctcatctccgacgtcttcgg 259
             |||||||||||||||||||||||| ||||||||
Sbjct: 69747 ggccgccgtcgtcctcatctccgatgtcttcgg 69779



 Score =  105 bits (53), Expect = 3e-19
 Identities = 77/85 (90%)
 Strand = Plus / Plus

                                                                         
Query: 279   aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338
             |||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 70861 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 70920

                                      
Query: 339   catggggatccatatgtacctgaaa 363
             ||||||||||| |  ||||||||||
Sbjct: 70921 catggggatcctttagtacctgaaa 70945



 Score =  105 bits (53), Expect = 3e-19
 Identities = 116/137 (84%)
 Strand = Plus / Plus

                                                                         
Query: 696   cactttgtcaagatattccctggggtttctcatggatggactgtgagatacaaaagtgaa 755
             |||||||||||||| ||||||||||||   ||||||||||||||||||||||| | ||| 
Sbjct: 73026 cactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgat 73085

                                                                         
Query: 756   gacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagc 815
             || |||| |||||| ||||| || |||||||||||| |  | ||||| ||||||||||  
Sbjct: 73086 gatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaat 73145

                              
Query: 816   aagaacctacagtgaat 832
             ||||||||  |||||||
Sbjct: 73146 aagaacctgaagtgaat 73162



 Score = 87.7 bits (44), Expect = 8e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                         
Query: 689   gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748
             ||||| ||||||||||||||| |||||||||||    ||||||||||| || ||||||||
Sbjct: 66486 gattggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaa 66545

                                                                         
Query: 749   aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactg 808
                ||| || || | |||||| ||||| || |||||||||||| || | |||||||||||
Sbjct: 66546 ggatgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactg 66605

                                     
Query: 809   gtttagcaagaacctacagtgaat 832
             |||||  ||||||||  |||||||
Sbjct: 66606 gtttaataagaacctcaagtgaat 66629



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 411   aaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctact 470
             ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| |||| |
Sbjct: 71892 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 71951

                                         
Query: 471   gttggggctgcaggttattgctggggtg 498
              ||||||||| |||||||||||||||||
Sbjct: 71952 attggggctgtaggttattgctggggtg 71979



 Score = 77.8 bits (39), Expect = 7e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                         
Query: 587   agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
             |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 72267 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 72326

                                        
Query: 647   attggtcaagcagttcgagcaggttct 673
             | |||| ||||||||||||||||||||
Sbjct: 72327 agtggtgaagcagttcgagcaggttct 72353



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                         
Query: 498   gcaaaggtggttgctgagctagcgaaagctaatgagatccatgcagctgttatgtcacac 557
             ||||||||||| |  ||| ||| ||||||| |||||||||| || ||||| ||||  |||
Sbjct: 72082 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 72141

                                            
Query: 558   ccttcttttgttactgttgaagatatcaaag 588
             || |||||||| |||||||| ||||| ||||
Sbjct: 72142 ccctcttttgtgactgttgatgatatgaaag 72172



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 222   tccaaggccgccgtcgtcctcatctccgacg 252
             |||||||||||||||||||||||||||||||
Sbjct: 75550 tccaaggccgccgtcgtcctcatctccgacg 75580



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 414   gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473
             |||||||||||||||||||| |||||||| ||||| || ||  | |||| ||||    | 
Sbjct: 77239 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 77298

                                      
Query: 474   ggggctgcaggttattgctggggtg 498
             ||||||||||||||||| |||||||
Sbjct: 77299 ggggctgcaggttattgttggggtg 77323



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                         
Query: 689   gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748
             |||||||||||| |||||||| ||||| || ||    ||||||||| |||||||||||||
Sbjct: 82650 gattgctcacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaa 82709

                                                        
Query: 749   aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctg 791
                 || || |||| ||| || ||||| |||||||||||||||
Sbjct: 82710 tcacgatgatgcagctgccgtcaagagcgctgaggaagccctg 82752



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 279   aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338
             ||||||||||| || || || |||| || ||| || || |||||||||||||||||| | 
Sbjct: 76416 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 76475

                           
Query: 339   catggggatccata 352
             |||||||| |||||
Sbjct: 76476 catggggacccata 76489



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 610   tacttggagctgaaattgacaaaacatccccaccagaattggtcaagcagttcgagcag 668
             ||||||| |||||||||||||| || || ||||||||  || | |||||||| ||||||
Sbjct: 77658 tacttggtgctgaaattgacaagacgtctccaccagagctgttaaagcagtttgagcag 77716



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 469    ctgttggggctgcaggttattgctggggtg 498
              ||||||||| || |||||||||||||||||
Sbjct: 131857 ctgttggggttggaggttattgctggggtg 131886



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  176 bits (89), Expect = 1e-40
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                            
Query: 107      gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166
                |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| |||||
Sbjct: 19265552 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 19265611

                                                                            
Query: 167      caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226
                 ||||| ||||| |||||||||||||||| |||||||||| ||||||||   ||||||||
Sbjct: 19265612 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 19265671

                                                 
Query: 227      ggccgccgtcgtcctcatctccgacgtcttcgg 259
                |||||||||||||||||||||||| ||||||||
Sbjct: 19265672 ggccgccgtcgtcctcatctccgatgtcttcgg 19265704



 Score =  105 bits (53), Expect = 3e-19
 Identities = 77/85 (90%)
 Strand = Plus / Plus

                                                                            
Query: 279      aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338
                |||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 19266786 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 19266845

                                         
Query: 339      catggggatccatatgtacctgaaa 363
                ||||||||||| |  ||||||||||
Sbjct: 19266846 catggggatcctttagtacctgaaa 19266870



 Score =  105 bits (53), Expect = 3e-19
 Identities = 116/137 (84%)
 Strand = Plus / Plus

                                                                            
Query: 696      cactttgtcaagatattccctggggtttctcatggatggactgtgagatacaaaagtgaa 755
                |||||||||||||| ||||||||||||   ||||||||||||||||||||||| | ||| 
Sbjct: 19268951 cactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgat 19269010

                                                                            
Query: 756      gacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagc 815
                || |||| |||||| ||||| || |||||||||||| |  | ||||| ||||||||||  
Sbjct: 19269011 gatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaat 19269070

                                 
Query: 816      aagaacctacagtgaat 832
                ||||||||  |||||||
Sbjct: 19269071 aagaacctgaagtgaat 19269087



 Score = 87.7 bits (44), Expect = 8e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                            
Query: 689      gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748
                ||||| ||||||||||||||| |||||||||||    ||||||||||| || ||||||||
Sbjct: 19262411 gattggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaa 19262470

                                                                            
Query: 749      aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactg 808
                   ||| || || | |||||| ||||| || |||||||||||| || | |||||||||||
Sbjct: 19262471 ggatgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactg 19262530

                                        
Query: 809      gtttagcaagaacctacagtgaat 832
                |||||  ||||||||  |||||||
Sbjct: 19262531 gtttaataagaacctcaagtgaat 19262554



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 411      aaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctact 470
                ||||||||||||||||| |||||  ||||||| ||||| || ||  ||||||| |||| |
Sbjct: 19267817 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 19267876

                                            
Query: 471      gttggggctgcaggttattgctggggtg 498
                 ||||||||| |||||||||||||||||
Sbjct: 19267877 attggggctgtaggttattgctggggtg 19267904



 Score = 77.8 bits (39), Expect = 7e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                            
Query: 587      agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646
                |||||| |||||||| || ||| |||||||||||||||||||    |  |||||||||||
Sbjct: 19268192 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 19268251

                                           
Query: 647      attggtcaagcagttcgagcaggttct 673
                | |||| ||||||||||||||||||||
Sbjct: 19268252 agtggtgaagcagttcgagcaggttct 19268278



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                            
Query: 498      gcaaaggtggttgctgagctagcgaaagctaatgagatccatgcagctgttatgtcacac 557
                ||||||||||| |  ||| ||| ||||||| |||||||||| || ||||| ||||  |||
Sbjct: 19268007 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 19268066

                                               
Query: 558      ccttcttttgttactgttgaagatatcaaag 588
                || |||||||| |||||||| ||||| ||||
Sbjct: 19268067 ccctcttttgtgactgttgatgatatgaaag 19268097



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 222      tccaaggccgccgtcgtcctcatctccgacg 252
                |||||||||||||||||||||||||||||||
Sbjct: 19271475 tccaaggccgccgtcgtcctcatctccgacg 19271505



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                            
Query: 414      gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473
                |||||||||||||||||||| |||||||| ||||| || ||  | |||| ||||    | 
Sbjct: 19273164 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 19273223

                                         
Query: 474      ggggctgcaggttattgctggggtg 498
                ||||||||||||||||| |||||||
Sbjct: 19273224 ggggctgcaggttattgttggggtg 19273248



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                            
Query: 689      gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748
                |||||||||||| |||||||| ||||| || ||    ||||||||| |||||||||||||
Sbjct: 19278575 gattgctcacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaa 19278634

                                                           
Query: 749      aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctg 791
                    || || |||| ||| || ||||| |||||||||||||||
Sbjct: 19278635 tcacgatgatgcagctgccgtcaagagcgctgaggaagccctg 19278677



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                            
Query: 279      aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338
                ||||||||||| || || || |||| || ||| || || |||||||||||||||||| | 
Sbjct: 19272341 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 19272400

                              
Query: 339      catggggatccata 352
                |||||||| |||||
Sbjct: 19272401 catggggacccata 19272414



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 610      tacttggagctgaaattgacaaaacatccccaccagaattggtcaagcagttcgagcag 668
                ||||||| |||||||||||||| || || ||||||||  || | |||||||| ||||||
Sbjct: 19273583 tacttggtgctgaaattgacaagacgtctccaccagagctgttaaagcagtttgagcag 19273641



 Score = 44.1 bits (22), Expect = 1.0
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 469      ctgttggggctgcaggttattgctggggtg 498
                ||||||||| || |||||||||||||||||
Sbjct: 19327782 ctgttggggttggaggttattgctggggtg 19327811



to top

>emb|CT831040.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109I20, full
           insert sequence
          Length = 1002

 Score =  133 bits (67), Expect = 1e-27
 Identities = 268/335 (80%)
 Strand = Plus / Plus

                                                                       
Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473
           |||||||||||||||||||| |||||||| ||||| || ||  | |||| ||||    ||
Sbjct: 379 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatt 438

                                                                       
Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533
           ||||||||||||||||| |||||||||||||| || |  ||| |||| ||||   |||| 
Sbjct: 439 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttagcaaaagtccatgaa 498

                                                                       
Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593
           ||||| || |||||  ||  ||||||||||||  || |||| || || |||||||| || 
Sbjct: 499 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 558

                                                                       
Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653
           |||||||| ||  || ||||||| |||||||||||||| || || ||||||||  || | 
Sbjct: 559 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 618

                                                                       
Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713
           |||||||| |||||| | || ||  ||||| | | |||||||||||| |||||||| |||
Sbjct: 619 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 678

                                              
Query: 714 cctggggtttctcatggatggactgtgagatacaa 748
           || || ||    ||||||||| |||||||||||||
Sbjct: 679 cccggcgtagagcatggatgggctgtgagatacaa 713



 Score =  117 bits (59), Expect = 8e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                       
Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281
           ||||||||||||||||||||||||||||||| ||| || |||||||| || || ||||||
Sbjct: 190 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 249

                                                                       
Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341
           |||||||| || || || |||| || ||| || || |||||||||||||||||| | |||
Sbjct: 250 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 309

                      
Query: 342 ggggatccata 352
           ||||| |||||
Sbjct: 310 ggggacccata 320



to top

>ref|NM_001062010.1| Oryza sativa (japonica cultivar-group) Os05g0399200 (Os05g0399200)
           mRNA, complete cds
          Length = 1038

 Score =  123 bits (62), Expect = 1e-24
 Identities = 299/378 (79%)
 Strand = Plus / Plus

                                                                       
Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473
           |||||||||||||||||||| |||||||| ||||| || ||  | |||| ||||    | 
Sbjct: 349 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 408

                                                                       
Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533
           ||||||||||||||||| |||||||||||||| || |  ||| |||  ||||   |||| 
Sbjct: 409 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttaggcaaagtccatgaa 468

                                                                       
Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593
           ||||| || |||||  ||  ||||||||||||  || |||| || || |||||||| || 
Sbjct: 469 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 528

                                                                       
Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653
           |||||||| ||  || ||||||| |||||||||||||| || || ||||||||  || | 
Sbjct: 529 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 588

                                                                       
Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713
           |||||||| |||||| | || ||  ||||| | | |||||||||||| |||||||| |||
Sbjct: 589 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 648

                                                                       
Query: 714 cctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaag 773
           || || ||    ||||||||| |||||||||||||    || || |||| ||| || |||
Sbjct: 649 cccggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtcaag 708

                             
Query: 774 agtgctgaggaagccctg 791
           || |||||||||||||||
Sbjct: 709 agcgctgaggaagccctg 726



 Score =  117 bits (59), Expect = 8e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                       
Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281
           ||||||||||||||||||||||||||||||| ||| || |||||||| || || ||||||
Sbjct: 160 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 219

                                                                       
Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341
           |||||||| || || || |||| || ||| || || |||||||||||||||||| | |||
Sbjct: 220 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 279

                      
Query: 342 ggggatccata 352
           ||||| |||||
Sbjct: 280 ggggacccata 290



to top

>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score =  123 bits (62), Expect = 1e-24
 Identities = 299/378 (79%)
 Strand = Plus / Plus

                                                                       
Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473
           |||||||||||||||||||| |||||||| ||||| || ||  | |||| ||||    | 
Sbjct: 350 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 409

                                                                       
Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533
           ||||||||||||||||| |||||||||||||| || |  ||| |||  ||||   |||| 
Sbjct: 410 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttaggcaaagtccatgaa 469

                                                                       
Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593
           ||||| || |||||  ||  ||||||||||||  || |||| || || |||||||| || 
Sbjct: 470 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 529

                                                                       
Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653
           |||||||| ||  || ||||||| |||||||||||||| || || ||||||||  || | 
Sbjct: 530 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 589

                                                                       
Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713
           |||||||| |||||| | || ||  ||||| | | |||||||||||| |||||||| |||
Sbjct: 590 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 649

                                                                       
Query: 714 cctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaag 773
           || || ||    ||||||||| |||||||||||||    || || |||| ||| || |||
Sbjct: 650 cccggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtcaag 709

                             
Query: 774 agtgctgaggaagccctg 791
           || |||||||||||||||
Sbjct: 710 agcgctgaggaagccctg 727



 Score =  117 bits (59), Expect = 8e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                       
Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281
           ||||||||||||||||||||||||||||||| ||| || |||||||| || || ||||||
Sbjct: 161 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 220

                                                                       
Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341
           |||||||| || || || |||| || ||| || || |||||||||||||||||| | |||
Sbjct: 221 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 280

                      
Query: 342 ggggatccata 352
           ||||| |||||
Sbjct: 281 ggggacccata 291



to top

>gb|AY104719.1| Zea mays PCO136367 mRNA sequence
          Length = 1169

 Score = 48.1 bits (24), Expect = 0.065
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 230 cgccgtcgtcctcatctccgacgtcttcgggt 261
           |||||||||||||  |||||||||||||||||
Sbjct: 284 cgccgtcgtcctcgcctccgacgtcttcgggt 315



to top

>gb|AF072326.1|AF072326 Zea mays endo-1,3-1,4-beta-D-glucanase mRNA, complete cds
          Length = 1020

 Score = 48.1 bits (24), Expect = 0.065
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 230 cgccgtcgtcctcatctccgacgtcttcgggt 261
           |||||||||||||  |||||||||||||||||
Sbjct: 274 cgccgtcgtcctcgcctccgacgtcttcgggt 305



to top

>emb|CT833276.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044B12, full
           insert sequence
          Length = 1155

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507
           ||||||||||| | || |||||| |||||||||| ||||||||
Sbjct: 588 tctactgttggagttggaggttactgctggggtggaaaggtgg 630



to top

>ref|NM_001062014.1| Oryza sativa (japonica cultivar-group) Os05g0400100 (Os05g0400100)
           mRNA, complete cds
          Length = 1126

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507
           ||||||||||| | || |||||| |||||||||| ||||||||
Sbjct: 604 tctactgttggagttggaggttactgctggggtggaaaggtgg 646



to top

>gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, complete sequence
          Length = 187726

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 719    ggtttctcatggatggactgtga 741
              |||||||||||||||||||||||
Sbjct: 150966 ggtttctcatggatggactgtga 150944



to top

>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0079P23, complete sequence
          Length = 125090

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 230   cgccgtcgtcctcatctccgacg 252
             |||||||||||||||||||||||
Sbjct: 28918 cgccgtcgtcctcatctccgacg 28940



to top

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 153    gccggcggcgagggcaaggtcgt 175
              |||||||||||||||||||||||
Sbjct: 413848 gccggcggcgagggcaaggtcgt 413826



to top

>gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence
          Length = 40466

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 407  gggaaaagcatttgaagaggcaa 429
            |||||||||||||||||||||||
Sbjct: 8043 gggaaaagcatttgaagaggcaa 8021



to top

>gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, complete sequence
          Length = 152182

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 719   ggtttctcatggatggactgtga 741
             |||||||||||||||||||||||
Sbjct: 43210 ggtttctcatggatggactgtga 43232



to top

>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence
          Length = 235357

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 58     tccctcccagccccagtccccaggaac 84
              |||||||||||||||| ||||||||||
Sbjct: 221321 tccctcccagccccagaccccaggaac 221347



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 230      cgccgtcgtcctcatctccgacg 252
                |||||||||||||||||||||||
Sbjct: 25090454 cgccgtcgtcctcatctccgacg 25090476



to top

>gb|AC129918.10| Homo sapiens chromosome 8, clone CTD-2132E17, complete sequence
          Length = 142854

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 58    tccctcccagccccagtccccaggaac 84
             |||||||||||||||| ||||||||||
Sbjct: 60927 tccctcccagccccagaccccaggaac 60953



to top

>dbj|AK107541.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H09, full
           insert sequence
          Length = 1126

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507
           ||||||||||| | || |||||| |||||||||| ||||||||
Sbjct: 604 tctactgttggagttggaggttactgctggggtggaaaggtgg 646



to top

>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 469   ctgttggggctgcaggttattgctggggtg 498
             ||||||||| || |||||||||||||||||
Sbjct: 31131 ctgttggggttggaggttattgctggggtg 31160



to top

>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence
          Length = 161984

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 410   aaaagcatttgaagaggcaaaa 431
             ||||||||||||||||||||||
Sbjct: 43893 aaaagcatttgaagaggcaaaa 43914



to top

>emb|CR788230.8| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2,
             complete sequence
          Length = 222975

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 652   tcaagcagttcgagcaggttc 672
             |||||||||||||||||||||
Sbjct: 44138 tcaagcagttcgagcaggttc 44158



to top

>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence
          Length = 177661

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1016   attgcactgaaataaaaatgc 1036
              |||||||||||||||||||||
Sbjct: 165680 attgcactgaaataaaaatgc 165660



to top

>ref|XM_540104.2| PREDICTED: Canis familiaris similar to tudor domain containing 6
           (LOC482990), mRNA
          Length = 6867

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 412 aagcatttgaagaggcaaaac 432
           |||||||||||||||||||||
Sbjct: 495 aagcatttgaagaggcaaaac 475



to top

>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence
          Length = 196765

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1016   attgcactgaaataaaaatgc 1036
              |||||||||||||||||||||
Sbjct: 178075 attgcactgaaataaaaatgc 178095



to top

>dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930053D13
            product:unclassifiable, full insert sequence
          Length = 2672

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1016 attgcactgaaataaaaatgc 1036
            |||||||||||||||||||||
Sbjct: 2238 attgcactgaaataaaaatgc 2218



to top

>emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, complete sequence
          Length = 37310

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1029  aaaaatgcgatatttgttgtt 1049
             |||||||||||||||||||||
Sbjct: 28403 aaaaatgcgatatttgttgtt 28423



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 65      cagccccagtccccaggaacc 85
               |||||||||||||||||||||
Sbjct: 7496800 cagccccagtccccaggaacc 7496780



to top

>gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene, complete cds
          Length = 152141

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 702   gtcaagatattccctggggtt 722
             |||||||||||||||||||||
Sbjct: 22807 gtcaagatattccctggggtt 22787



to top

>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence
          Length = 166952

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 721   tttctcatggatggactgtga 741
             |||||||||||||||||||||
Sbjct: 55109 tttctcatggatggactgtga 55129



to top

>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence
          Length = 133452

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 702    gtcaagatattccctggggtt 722
              |||||||||||||||||||||
Sbjct: 132530 gtcaagatattccctggggtt 132550



to top

>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence
          Length = 152969

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 652   tcaagcagttcgagcaggttc 672
             |||||||||||||||||||||
Sbjct: 24242 tcaagcagttcgagcaggttc 24222


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 174,535,192
Number of extensions: 9331794
Number of successful extensions: 165119
Number of sequences better than 10.0: 37
Number of HSP's gapped: 165103
Number of HSP's successfully gapped: 85
Length of query: 1066
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1043
Effective length of database: 18,503,978,556
Effective search space: 19299649633908
Effective search space used: 19299649633908
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top