| Clone Name | FLbaf48b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062009.1| Oryza sativa (japonica cultivar-group) Os05g0399100 (Os05g0399100) mRNA, partial cds Length = 1125 Score = 591 bits (298), Expect = e-165 Identities = 619/726 (85%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 214 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 273 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 274 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 333 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 334 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 393 Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346 |||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 394 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 453 Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406 ||| | |||||||||| | || | ||| | ||| ||||| |||| || |||| ||| Sbjct: 454 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 513 Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466 || ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| || Sbjct: 514 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 573 Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526 || | ||||||||| ||||||||||||||||||||||||||| | ||| ||| |||||| Sbjct: 574 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 633 Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586 | |||||||||| || ||||| |||| ||||| |||||||| |||||||| ||||| || Sbjct: 634 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 693 Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 694 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 753 Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706 | |||| |||||||||||||||||||| || || || |||||||||| ||||||||||| Sbjct: 754 agtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 813 Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766 ||| |||||||||||| ||||||||||||||||||||||| | ||| || |||| ||| Sbjct: 814 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 873 Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacctaca 826 ||| ||||| || |||||||||||| | | ||||| |||||||||| |||||||| | Sbjct: 874 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 933 Query: 827 gtgaat 832 |||||| Sbjct: 934 gtgaat 939
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full insert sequence Length = 1014 Score = 591 bits (298), Expect = e-165 Identities = 619/726 (85%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 32 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 91 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 92 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 151 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 152 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 211 Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346 |||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 212 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 271 Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406 ||| | |||||||||| | || | ||| | ||| ||||| |||| || |||| ||| Sbjct: 272 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 331 Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466 || ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| || Sbjct: 332 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 391 Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526 || | ||||||||| ||||||||||||||||||||||||||| | ||| ||| |||||| Sbjct: 392 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 451 Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586 | |||||||||| || ||||| |||| ||||| |||||||| |||||||| ||||| || Sbjct: 452 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 511 Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 512 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 571 Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706 | |||| |||||||||||||||||||| || || || |||||||||| ||||||||||| Sbjct: 572 agtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 631 Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766 ||| |||||||||||| ||||||||||||||||||||||| | ||| || |||| ||| Sbjct: 632 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 691 Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacctaca 826 ||| ||||| || |||||||||||| | | ||||| |||||||||| |||||||| | Sbjct: 692 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 751 Query: 827 gtgaat 832 |||||| Sbjct: 752 gtgaat 757
>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full insert sequence Length = 1127 Score = 581 bits (293), Expect = e-162 Identities = 611/717 (85%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 216 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 275 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 276 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 335 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 336 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 395 Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346 |||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 396 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 455 Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406 ||| | |||||||||| | || | ||| | ||| ||||| |||| || |||| ||| Sbjct: 456 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 515 Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466 || ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| || Sbjct: 516 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 575 Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526 || | ||||||||| ||||||||||||||||||||||||||| | ||| ||| |||||| Sbjct: 576 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 635 Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586 | |||||||||| || ||||| |||| ||||| |||||||| |||||||| ||||| || Sbjct: 636 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 695 Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 696 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 755 Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706 | ||| |||||||||||||||||||| || || || |||||||||| ||||||||||| Sbjct: 756 agtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 815 Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766 ||| |||||||||||| ||||||||||||||||||||||| | ||| || |||| ||| Sbjct: 816 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 875 Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacct 823 ||| ||||| || |||||||||||| | | ||||| |||||||||| |||||||| Sbjct: 876 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacct 932
>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full insert sequence Length = 1127 Score = 581 bits (293), Expect = e-162 Identities = 611/717 (85%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 216 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 275 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 276 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 335 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagat 286 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 336 ggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagat 395 Query: 287 agccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacatgggga 346 |||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 396 agccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatgggga 455 Query: 347 tccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgcccc 406 ||| | |||||||||| | || | ||| | ||| ||||| |||| || |||| ||| Sbjct: 456 tcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggccc 515 Query: 407 gggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatc 466 || ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| || Sbjct: 516 ggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtc 575 Query: 467 tactgttggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagc 526 || | ||||||||| ||||||||||||||||||||||||||| | ||| ||| |||||| Sbjct: 576 tagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagc 635 Query: 527 taatgagatccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaa 586 | |||||||||| || ||||| |||| ||||| |||||||| |||||||| ||||| || Sbjct: 636 tcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaa 695 Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 696 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 755 Query: 647 attggtcaagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaa 706 | ||| |||||||||||||||||||| || || || |||||||||| ||||||||||| Sbjct: 756 agtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaa 815 Query: 707 gatattccctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgc 766 ||| |||||||||||| ||||||||||||||||||||||| | ||| || |||| ||| Sbjct: 816 gatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgc 875 Query: 767 tgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagcaagaacct 823 ||| ||||| || |||||||||||| | | ||||| |||||||||| |||||||| Sbjct: 876 tgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacct 932
>gb|AY104092.1| Zea mays PCO081688 mRNA sequence Length = 1359 Score = 260 bits (131), Expect = 9e-66 Identities = 540/673 (80%), Gaps = 5/673 (0%) Strand = Plus / Plus Query: 120 cagtgctgcgcggacccgccgacgctcaaccccgccggcggcgagggcaaggtcgtggac 179 |||||||||| |||||||| | || ||||| ||| |||| |||||||||||||| ||| Sbjct: 330 cagtgctgcgataacccgccggccctgaacccggcctgcggggagggcaaggtcgtcgac 389 Query: 180 agcttcggcgggatcacggcgtacgtctccggcgcccga-gagtccaaggccgccgtcgt 238 |||||||||||| ||| ||| |||||| ||||| ||||| || ||||||||||||||||| Sbjct: 390 agcttcggcgggctcaaggcctacgtcgccggc-cccgaggactccaaggccgccgtcgt 448 Query: 239 cctcatctccgacgtcttcgggtttgaagcgccgaatctgaggaagatagccgataaagt 298 |||| | ||||||||||||| || |||||||||| ||||||||| |||||||| ||||| Sbjct: 449 cctcgttgccgacgtcttcggattcgaagcgccgattctgaggaacatagccgacaaagt 508 Query: 299 cgcttcgtctggatatttagttgtggtgccagatttcttacatggggatccatatgtacc 358 |||||||| || || || |||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 509 tgcttcgtcagggtactttgttgtggtaccagatttctttcatggggatccttatgtacc 568 Query: 359 tgaaaacgccgacagaccaatacaagtgtggttaaaggagcatgccccgggaaaagcatt 418 ||| || || || | | |||| |||||| | ||| ||| | |||| ||||| || Sbjct: 569 tgagaatgctgagaagctcatacctgtgtggctgaagtcacatactccggaaaaagggtt 628 Query: 419 tgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgttggggc 478 ||||||||||||||| |||||||| ||||| || || | ||||| ||| | ||||| || Sbjct: 629 tgaagaggcaaaaccagttattgcggctctaaaggagaagggagtgtctgccgttggagc 688 Query: 479 tgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgagatcc- 537 |||||| |||||||||||||||||||| |||| ||| | || ||||| |||||| ||| Sbjct: 689 tgcagggtattgctggggtgcaaaggtcgttgtggagttggcaaaagcaaatgagctcct 748 Query: 538 --atgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtgaa 595 | || ||||| ||| ||||||||||||||||| || | |||||||||||||| || Sbjct: 749 caaggctgctgtactgttgcacccttcttttgttaccgtctacgatatcaaagaggtcaa 808 Query: 596 atgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtcaa 655 |||| | || || ||||||||||||| || || | ||||||||||| || ||||| Sbjct: 809 atgctcaatctctatacttggagctgagatggatgtgaggtccccaccagagttagtcaa 868 Query: 656 gcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattccc 715 ||| |||||||| | || || ||||||||| ||| |||||| |||||| | ||||| Sbjct: 869 gcaattcgagcaagccctttctgtgaactcaggggttggtcacttcgtcaaggtcttccc 928 Query: 716 tggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaagag 775 ||| || | ||||| |||| |||||||||| || || |||| ||| |||||||| Sbjct: 929 tggcgtggcgcatgggtggagcgtgagatacagcctcgatgatgcagctgccgtgaagag 988 Query: 776 tgctgaggaagcc 788 |||||||||||| Sbjct: 989 cgctgaggaagcc 1001
>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence Length = 1139 Score = 216 bits (109), Expect = 1e-52 Identities = 291/349 (83%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 163 agggcaaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccga-gag 221 ||||||||||||| ||||||||||||||| ||| ||| |||||| ||||| ||||| || Sbjct: 254 agggcaaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggc-cccgaggac 312 Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281 ||||||||||||||||||||| | ||||||||||||| || |||||||||| ||||||| Sbjct: 313 tccaaggccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattctgagg 372 Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341 || |||||||| ||||| |||||||| || || || |||||||| ||||||||||| ||| Sbjct: 373 aacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcat 432 Query: 342 ggggatccatatgtacctgaaaacgccgacagaccaatacaagtgtggttaaaggagcat 401 |||||||| ||||||||||| || || || | | |||| |||||| | ||| ||| Sbjct: 433 ggggatccttatgtacctgagaatgctgagaagctcatacctgtgtggctgaagtcacat 492 Query: 402 gccccgggaaaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaagga 461 | |||| ||||| ||||||||||||||||| ||||| || ||||| || || | ||| Sbjct: 493 actccggaaaaagggtttgaagaggcaaaaccagttatcgcggctctaaaggagaaggga 552 Query: 462 gtatctactgttggggctgcaggttattgctggggtgcaaaggtggttg 510 || ||| | ||||| |||||||| |||||||||||||||||||| |||| Sbjct: 553 gtgtctgccgttggagctgcagggtattgctggggtgcaaaggtcgttg 601
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 176 bits (89), Expect = 1e-40 Identities = 137/153 (89%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 69627 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 69686 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 69687 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 69746 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgg 259 |||||||||||||||||||||||| |||||||| Sbjct: 69747 ggccgccgtcgtcctcatctccgatgtcttcgg 69779 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 279 aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338 |||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||||| Sbjct: 70861 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 70920 Query: 339 catggggatccatatgtacctgaaa 363 ||||||||||| | |||||||||| Sbjct: 70921 catggggatcctttagtacctgaaa 70945 Score = 105 bits (53), Expect = 3e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 696 cactttgtcaagatattccctggggtttctcatggatggactgtgagatacaaaagtgaa 755 |||||||||||||| |||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 73026 cactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgat 73085 Query: 756 gacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagc 815 || |||| |||||| ||||| || |||||||||||| | | ||||| |||||||||| Sbjct: 73086 gatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaat 73145 Query: 816 aagaacctacagtgaat 832 |||||||| ||||||| Sbjct: 73146 aagaacctgaagtgaat 73162 Score = 87.7 bits (44), Expect = 8e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 689 gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748 ||||| ||||||||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 66486 gattggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaa 66545 Query: 749 aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactg 808 ||| || || | |||||| ||||| || |||||||||||| || | ||||||||||| Sbjct: 66546 ggatgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactg 66605 Query: 809 gtttagcaagaacctacagtgaat 832 ||||| |||||||| ||||||| Sbjct: 66606 gtttaataagaacctcaagtgaat 66629 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 411 aaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctact 470 ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| |||| | Sbjct: 71892 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 71951 Query: 471 gttggggctgcaggttattgctggggtg 498 ||||||||| ||||||||||||||||| Sbjct: 71952 attggggctgtaggttattgctggggtg 71979 Score = 77.8 bits (39), Expect = 7e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 72267 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 72326 Query: 647 attggtcaagcagttcgagcaggttct 673 | |||| |||||||||||||||||||| Sbjct: 72327 agtggtgaagcagttcgagcaggttct 72353 Score = 61.9 bits (31), Expect = 4e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 498 gcaaaggtggttgctgagctagcgaaagctaatgagatccatgcagctgttatgtcacac 557 ||||||||||| | ||| ||| ||||||| |||||||||| || ||||| |||| ||| Sbjct: 72082 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 72141 Query: 558 ccttcttttgttactgttgaagatatcaaag 588 || |||||||| |||||||| ||||| |||| Sbjct: 72142 ccctcttttgtgactgttgatgatatgaaag 72172 Score = 61.9 bits (31), Expect = 4e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 222 tccaaggccgccgtcgtcctcatctccgacg 252 ||||||||||||||||||||||||||||||| Sbjct: 75550 tccaaggccgccgtcgtcctcatctccgacg 75580 Score = 58.0 bits (29), Expect = 7e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473 |||||||||||||||||||| |||||||| ||||| || || | |||| |||| | Sbjct: 77239 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 77298 Query: 474 ggggctgcaggttattgctggggtg 498 ||||||||||||||||| ||||||| Sbjct: 77299 ggggctgcaggttattgttggggtg 77323 Score = 54.0 bits (27), Expect = 0.001 Identities = 84/103 (81%) Strand = Plus / Plus Query: 689 gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748 |||||||||||| |||||||| ||||| || || ||||||||| ||||||||||||| Sbjct: 82650 gattgctcacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaa 82709 Query: 749 aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctg 791 || || |||| ||| || ||||| ||||||||||||||| Sbjct: 82710 tcacgatgatgcagctgccgtcaagagcgctgaggaagccctg 82752 Score = 52.0 bits (26), Expect = 0.004 Identities = 62/74 (83%) Strand = Plus / Plus Query: 279 aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338 ||||||||||| || || || |||| || ||| || || |||||||||||||||||| | Sbjct: 76416 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 76475 Query: 339 catggggatccata 352 |||||||| ||||| Sbjct: 76476 catggggacccata 76489 Score = 46.1 bits (23), Expect = 0.26 Identities = 50/59 (84%) Strand = Plus / Plus Query: 610 tacttggagctgaaattgacaaaacatccccaccagaattggtcaagcagttcgagcag 668 ||||||| |||||||||||||| || || |||||||| || | |||||||| |||||| Sbjct: 77658 tacttggtgctgaaattgacaagacgtctccaccagagctgttaaagcagtttgagcag 77716 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 469 ctgttggggctgcaggttattgctggggtg 498 ||||||||| || ||||||||||||||||| Sbjct: 131857 ctgttggggttggaggttattgctggggtg 131886
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 176 bits (89), Expect = 1e-40 Identities = 137/153 (89%) Strand = Plus / Plus Query: 107 gatggctaccccgcagtgctgcgcggacccgccgacgctcaaccccgccggcggcgaggg 166 |||||| | |||||||||||||||| |||| |||||||| ||||| |||||||| ||||| Sbjct: 19265552 gatggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggg 19265611 Query: 167 caaggtcgtggacagcttcggcgggatcacggcgtacgtctccggcgcccgagagtccaa 226 ||||| ||||| |||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 19265612 gaaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaa 19265671 Query: 227 ggccgccgtcgtcctcatctccgacgtcttcgg 259 |||||||||||||||||||||||| |||||||| Sbjct: 19265672 ggccgccgtcgtcctcatctccgatgtcttcgg 19265704 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 279 aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338 |||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||||| Sbjct: 19266786 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 19266845 Query: 339 catggggatccatatgtacctgaaa 363 ||||||||||| | |||||||||| Sbjct: 19266846 catggggatcctttagtacctgaaa 19266870 Score = 105 bits (53), Expect = 3e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 696 cactttgtcaagatattccctggggtttctcatggatggactgtgagatacaaaagtgaa 755 |||||||||||||| |||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 19268951 cactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgat 19269010 Query: 756 gacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactggtttagc 815 || |||| |||||| ||||| || |||||||||||| | | ||||| |||||||||| Sbjct: 19269011 gatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaat 19269070 Query: 816 aagaacctacagtgaat 832 |||||||| ||||||| Sbjct: 19269071 aagaacctgaagtgaat 19269087 Score = 87.7 bits (44), Expect = 8e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 689 gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748 ||||| ||||||||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 19262411 gattggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaa 19262470 Query: 749 aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctgtcacatatgatcgactg 808 ||| || || | |||||| ||||| || |||||||||||| || | ||||||||||| Sbjct: 19262471 ggatgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactg 19262530 Query: 809 gtttagcaagaacctacagtgaat 832 ||||| |||||||| ||||||| Sbjct: 19262531 gtttaataagaacctcaagtgaat 19262554 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 411 aaagcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctact 470 ||||||||||||||||| ||||| ||||||| ||||| || || ||||||| |||| | Sbjct: 19267817 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 19267876 Query: 471 gttggggctgcaggttattgctggggtg 498 ||||||||| ||||||||||||||||| Sbjct: 19267877 attggggctgtaggttattgctggggtg 19267904 Score = 77.8 bits (39), Expect = 7e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 587 agaggtgaaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccaga 646 |||||| |||||||| || ||| ||||||||||||||||||| | ||||||||||| Sbjct: 19268192 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 19268251 Query: 647 attggtcaagcagttcgagcaggttct 673 | |||| |||||||||||||||||||| Sbjct: 19268252 agtggtgaagcagttcgagcaggttct 19268278 Score = 61.9 bits (31), Expect = 4e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 498 gcaaaggtggttgctgagctagcgaaagctaatgagatccatgcagctgttatgtcacac 557 ||||||||||| | ||| ||| ||||||| |||||||||| || ||||| |||| ||| Sbjct: 19268007 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 19268066 Query: 558 ccttcttttgttactgttgaagatatcaaag 588 || |||||||| |||||||| ||||| |||| Sbjct: 19268067 ccctcttttgtgactgttgatgatatgaaag 19268097 Score = 61.9 bits (31), Expect = 4e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 222 tccaaggccgccgtcgtcctcatctccgacg 252 ||||||||||||||||||||||||||||||| Sbjct: 19271475 tccaaggccgccgtcgtcctcatctccgacg 19271505 Score = 58.0 bits (29), Expect = 7e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473 |||||||||||||||||||| |||||||| ||||| || || | |||| |||| | Sbjct: 19273164 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 19273223 Query: 474 ggggctgcaggttattgctggggtg 498 ||||||||||||||||| ||||||| Sbjct: 19273224 ggggctgcaggttattgttggggtg 19273248 Score = 54.0 bits (27), Expect = 0.001 Identities = 84/103 (81%) Strand = Plus / Plus Query: 689 gattgctcactttgtcaagatattccctggggtttctcatggatggactgtgagatacaa 748 |||||||||||| |||||||| ||||| || || ||||||||| ||||||||||||| Sbjct: 19278575 gattgctcacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaa 19278634 Query: 749 aagtgaagacgcaggtgctgtgaagagtgctgaggaagccctg 791 || || |||| ||| || ||||| ||||||||||||||| Sbjct: 19278635 tcacgatgatgcagctgccgtcaagagcgctgaggaagccctg 19278677 Score = 52.0 bits (26), Expect = 0.004 Identities = 62/74 (83%) Strand = Plus / Plus Query: 279 aggaagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttctta 338 ||||||||||| || || || |||| || ||| || || |||||||||||||||||| | Sbjct: 19272341 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 19272400 Query: 339 catggggatccata 352 |||||||| ||||| Sbjct: 19272401 catggggacccata 19272414 Score = 46.1 bits (23), Expect = 0.26 Identities = 50/59 (84%) Strand = Plus / Plus Query: 610 tacttggagctgaaattgacaaaacatccccaccagaattggtcaagcagttcgagcag 668 ||||||| |||||||||||||| || || |||||||| || | |||||||| |||||| Sbjct: 19273583 tacttggtgctgaaattgacaagacgtctccaccagagctgttaaagcagtttgagcag 19273641 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 469 ctgttggggctgcaggttattgctggggtg 498 ||||||||| || ||||||||||||||||| Sbjct: 19327782 ctgttggggttggaggttattgctggggtg 19327811
>emb|CT831040.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109I20, full insert sequence Length = 1002 Score = 133 bits (67), Expect = 1e-27 Identities = 268/335 (80%) Strand = Plus / Plus Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473 |||||||||||||||||||| |||||||| ||||| || || | |||| |||| || Sbjct: 379 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatt 438 Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533 ||||||||||||||||| |||||||||||||| || | ||| |||| |||| |||| Sbjct: 439 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttagcaaaagtccatgaa 498 Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593 ||||| || ||||| || |||||||||||| || |||| || || |||||||| || Sbjct: 499 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 558 Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653 |||||||| || || ||||||| |||||||||||||| || || |||||||| || | Sbjct: 559 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 618 Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713 |||||||| |||||| | || || ||||| | | |||||||||||| |||||||| ||| Sbjct: 619 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 678 Query: 714 cctggggtttctcatggatggactgtgagatacaa 748 || || || ||||||||| ||||||||||||| Sbjct: 679 cccggcgtagagcatggatgggctgtgagatacaa 713 Score = 117 bits (59), Expect = 8e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281 ||||||||||||||||||||||||||||||| ||| || |||||||| || || |||||| Sbjct: 190 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 249 Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341 |||||||| || || || |||| || ||| || || |||||||||||||||||| | ||| Sbjct: 250 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 309 Query: 342 ggggatccata 352 ||||| ||||| Sbjct: 310 ggggacccata 320
>ref|NM_001062010.1| Oryza sativa (japonica cultivar-group) Os05g0399200 (Os05g0399200) mRNA, complete cds Length = 1038 Score = 123 bits (62), Expect = 1e-24 Identities = 299/378 (79%) Strand = Plus / Plus Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473 |||||||||||||||||||| |||||||| ||||| || || | |||| |||| | Sbjct: 349 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 408 Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533 ||||||||||||||||| |||||||||||||| || | ||| ||| |||| |||| Sbjct: 409 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttaggcaaagtccatgaa 468 Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593 ||||| || ||||| || |||||||||||| || |||| || || |||||||| || Sbjct: 469 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 528 Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653 |||||||| || || ||||||| |||||||||||||| || || |||||||| || | Sbjct: 529 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 588 Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713 |||||||| |||||| | || || ||||| | | |||||||||||| |||||||| ||| Sbjct: 589 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 648 Query: 714 cctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaag 773 || || || ||||||||| ||||||||||||| || || |||| ||| || ||| Sbjct: 649 cccggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtcaag 708 Query: 774 agtgctgaggaagccctg 791 || ||||||||||||||| Sbjct: 709 agcgctgaggaagccctg 726 Score = 117 bits (59), Expect = 8e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281 ||||||||||||||||||||||||||||||| ||| || |||||||| || || |||||| Sbjct: 160 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 219 Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341 |||||||| || || || |||| || ||| || || |||||||||||||||||| | ||| Sbjct: 220 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 279 Query: 342 ggggatccata 352 ||||| ||||| Sbjct: 280 ggggacccata 290
>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full insert sequence Length = 1039 Score = 123 bits (62), Expect = 1e-24 Identities = 299/378 (79%) Strand = Plus / Plus Query: 414 gcatttgaagaggcaaaacctgttattgctgctctcaaagaacaaggagtatctactgtt 473 |||||||||||||||||||| |||||||| ||||| || || | |||| |||| | Sbjct: 350 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 409 Query: 474 ggggctgcaggttattgctggggtgcaaaggtggttgctgagctagcgaaagctaatgag 533 ||||||||||||||||| |||||||||||||| || | ||| ||| |||| |||| Sbjct: 410 ggggctgcaggttattgttggggtgcaaaggtagtggtggagttaggcaaagtccatgaa 469 Query: 534 atccatgcagctgttatgtcacacccttcttttgttactgttgaagatatcaaagaggtg 593 ||||| || ||||| || |||||||||||| || |||| || || |||||||| || Sbjct: 470 atccaggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtc 529 Query: 594 aaatgccccatagctgtacttggagctgaaattgacaaaacatccccaccagaattggtc 653 |||||||| || || ||||||| |||||||||||||| || || |||||||| || | Sbjct: 530 aaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgtta 589 Query: 654 aagcagttcgagcaggttctgtcctctaactcagggattgctcactttgtcaagatattc 713 |||||||| |||||| | || || ||||| | | |||||||||||| |||||||| ||| Sbjct: 590 aagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttc 649 Query: 714 cctggggtttctcatggatggactgtgagatacaaaagtgaagacgcaggtgctgtgaag 773 || || || ||||||||| ||||||||||||| || || |||| ||| || ||| Sbjct: 650 cccggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtcaag 709 Query: 774 agtgctgaggaagccctg 791 || ||||||||||||||| Sbjct: 710 agcgctgaggaagccctg 727 Score = 117 bits (59), Expect = 8e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 222 tccaaggccgccgtcgtcctcatctccgacgtcttcgggtttgaagcgccgaatctgagg 281 ||||||||||||||||||||||||||||||| ||| || |||||||| || || |||||| Sbjct: 161 tccaaggccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgagg 220 Query: 282 aagatagccgataaagtcgcttcgtctggatatttagttgtggtgccagatttcttacat 341 |||||||| || || || |||| || ||| || || |||||||||||||||||| | ||| Sbjct: 221 aagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcat 280 Query: 342 ggggatccata 352 ||||| ||||| Sbjct: 281 ggggacccata 291
>gb|AY104719.1| Zea mays PCO136367 mRNA sequence Length = 1169 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 cgccgtcgtcctcatctccgacgtcttcgggt 261 ||||||||||||| ||||||||||||||||| Sbjct: 284 cgccgtcgtcctcgcctccgacgtcttcgggt 315
>gb|AF072326.1|AF072326 Zea mays endo-1,3-1,4-beta-D-glucanase mRNA, complete cds Length = 1020 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 cgccgtcgtcctcatctccgacgtcttcgggt 261 ||||||||||||| ||||||||||||||||| Sbjct: 274 cgccgtcgtcctcgcctccgacgtcttcgggt 305
>emb|CT833276.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044B12, full insert sequence Length = 1155 Score = 46.1 bits (23), Expect = 0.26 Identities = 38/43 (88%) Strand = Plus / Plus Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507 ||||||||||| | || |||||| |||||||||| |||||||| Sbjct: 588 tctactgttggagttggaggttactgctggggtggaaaggtgg 630
>ref|NM_001062014.1| Oryza sativa (japonica cultivar-group) Os05g0400100 (Os05g0400100) mRNA, complete cds Length = 1126 Score = 46.1 bits (23), Expect = 0.26 Identities = 38/43 (88%) Strand = Plus / Plus Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507 ||||||||||| | || |||||| |||||||||| |||||||| Sbjct: 604 tctactgttggagttggaggttactgctggggtggaaaggtgg 646
>gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, complete sequence Length = 187726 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 719 ggtttctcatggatggactgtga 741 ||||||||||||||||||||||| Sbjct: 150966 ggtttctcatggatggactgtga 150944
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 230 cgccgtcgtcctcatctccgacg 252 ||||||||||||||||||||||| Sbjct: 28918 cgccgtcgtcctcatctccgacg 28940
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 gccggcggcgagggcaaggtcgt 175 ||||||||||||||||||||||| Sbjct: 413848 gccggcggcgagggcaaggtcgt 413826
>gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence Length = 40466 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 407 gggaaaagcatttgaagaggcaa 429 ||||||||||||||||||||||| Sbjct: 8043 gggaaaagcatttgaagaggcaa 8021
>gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, complete sequence Length = 152182 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 719 ggtttctcatggatggactgtga 741 ||||||||||||||||||||||| Sbjct: 43210 ggtttctcatggatggactgtga 43232
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 tccctcccagccccagtccccaggaac 84 |||||||||||||||| |||||||||| Sbjct: 221321 tccctcccagccccagaccccaggaac 221347
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 230 cgccgtcgtcctcatctccgacg 252 ||||||||||||||||||||||| Sbjct: 25090454 cgccgtcgtcctcatctccgacg 25090476
>gb|AC129918.10| Homo sapiens chromosome 8, clone CTD-2132E17, complete sequence Length = 142854 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 tccctcccagccccagtccccaggaac 84 |||||||||||||||| |||||||||| Sbjct: 60927 tccctcccagccccagaccccaggaac 60953
>dbj|AK107541.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H09, full insert sequence Length = 1126 Score = 46.1 bits (23), Expect = 0.26 Identities = 38/43 (88%) Strand = Plus / Plus Query: 465 tctactgttggggctgcaggttattgctggggtgcaaaggtgg 507 ||||||||||| | || |||||| |||||||||| |||||||| Sbjct: 604 tctactgttggagttggaggttactgctggggtggaaaggtgg 646
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 469 ctgttggggctgcaggttattgctggggtg 498 ||||||||| || ||||||||||||||||| Sbjct: 31131 ctgttggggttggaggttattgctggggtg 31160
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 aaaagcatttgaagaggcaaaa 431 |||||||||||||||||||||| Sbjct: 43893 aaaagcatttgaagaggcaaaa 43914
>emb|CR788230.8| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2, complete sequence Length = 222975 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 652 tcaagcagttcgagcaggttc 672 ||||||||||||||||||||| Sbjct: 44138 tcaagcagttcgagcaggttc 44158
>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence Length = 177661 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 attgcactgaaataaaaatgc 1036 ||||||||||||||||||||| Sbjct: 165680 attgcactgaaataaaaatgc 165660
>ref|XM_540104.2| PREDICTED: Canis familiaris similar to tudor domain containing 6 (LOC482990), mRNA Length = 6867 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 aagcatttgaagaggcaaaac 432 ||||||||||||||||||||| Sbjct: 495 aagcatttgaagaggcaaaac 475
>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence Length = 196765 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1016 attgcactgaaataaaaatgc 1036 ||||||||||||||||||||| Sbjct: 178075 attgcactgaaataaaaatgc 178095
>dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930053D13 product:unclassifiable, full insert sequence Length = 2672 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 attgcactgaaataaaaatgc 1036 ||||||||||||||||||||| Sbjct: 2238 attgcactgaaataaaaatgc 2218
>emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, complete sequence Length = 37310 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1029 aaaaatgcgatatttgttgtt 1049 ||||||||||||||||||||| Sbjct: 28403 aaaaatgcgatatttgttgtt 28423
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cagccccagtccccaggaacc 85 ||||||||||||||||||||| Sbjct: 7496800 cagccccagtccccaggaacc 7496780
>gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene, complete cds Length = 152141 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 702 gtcaagatattccctggggtt 722 ||||||||||||||||||||| Sbjct: 22807 gtcaagatattccctggggtt 22787
>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence Length = 166952 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 721 tttctcatggatggactgtga 741 ||||||||||||||||||||| Sbjct: 55109 tttctcatggatggactgtga 55129
>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence Length = 133452 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 702 gtcaagatattccctggggtt 722 ||||||||||||||||||||| Sbjct: 132530 gtcaagatattccctggggtt 132550
>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence Length = 152969 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 652 tcaagcagttcgagcaggttc 672 ||||||||||||||||||||| Sbjct: 24242 tcaagcagttcgagcaggttc 24222 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 174,535,192 Number of extensions: 9331794 Number of successful extensions: 165119 Number of sequences better than 10.0: 37 Number of HSP's gapped: 165103 Number of HSP's successfully gapped: 85 Length of query: 1066 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1043 Effective length of database: 18,503,978,556 Effective search space: 19299649633908 Effective search space used: 19299649633908 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)