ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057184.1| Oryza sativa (japonica cultivar-group) Os03g0609800 (Os03g0609800) mRNA, complete cds Length = 2706 Score = 831 bits (419), Expect = 0.0 Identities = 1049/1259 (83%) Strand = Plus / Plus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 515 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 574 Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 575 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 634 Query: 684 tttatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagctt 743 ||| |||||||||||| |||||||||||||||||||| | |||||||||| | |||| Sbjct: 635 tttgtcttcacaagtttcctcttttgtcaaagagttcctgcctgcaaagattagctgctt 694 Query: 744 caagtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctg 803 |||| || | |||| ||||||| || || |||| |||||||| |||||||| |||| | Sbjct: 695 caagcaatgtggaaggcaatgaagagttggatatttctgacatccctggtggaccttcag 754 Query: 804 catttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatg 863 |||||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || | Sbjct: 755 catttgaaatctgtgctaagttctgctatggaatgattgtaacactcaatgcgtataacg 814 Query: 864 ttcttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaa 923 ||||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 815 ttcttgctgctcgctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaa 874 Query: 924 atcttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagact 983 | || || ||||||||||| || ||||||||||| ||||| ||||| ||||||| || | Sbjct: 875 acctcatttacaaaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggatt 934 Query: 984 cgatcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaa 1043 | |||||||| ||||| || |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 935 caatcatagtactgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaa 994 Query: 1044 tcaaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagt 1103 ||||||| |||||||| || |||||||||||||| | ||||||||| |||||||| |||| Sbjct: 995 tcaaccattgcattgactcaattgcatcgaaggcattaattgatccatcagaggtcgagt 1054 Query: 1104 ggtcatacacctacaacagaaaaaagctccaatctgagaatggtgttgattctcactgga 1163 |||||||||| ||||||||||| || || | ||| |||||||| |||||||| |||| Sbjct: 1055 ggtcatacacatacaacagaaagaaactgccatcagagaatggccacgattctcattgga 1114 Query: 1164 atggagtcaggatgcaacagatggtccctaaggactggtgggttgaggacctttctgaac 1223 |||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| | Sbjct: 1115 atggtgtcaggaagcaattgatagtccctaaggactggtgggttgaggacctttgtgatc 1174 Query: 1224 ttgaaatggatttgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctg 1283 | || ||||||||||||||||| ||| || | | || || ||||||||||||||| | Sbjct: 1175 tcgagatggatttgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgc 1234 Query: 1284 ctgtagttattggagaagcactaagagcctatgcattccgacgattgtttggttcccttg 1343 || |||| ||||| || || || ||||||||||||| ||| | || | |||||||| | Sbjct: 1235 ctatagtgattggtgaggcgctgagagcctatgcataccgcaggctgctgggttccctag 1294 Query: 1344 aagatgctgtgagcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattg 1403 |||| ||||||||||||||| |||||||||| ||||| ||||| || || |||| ||| Sbjct: 1295 aagacgctgtgagcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatca 1354 Query: 1404 tatttctgctgcccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaa 1463 |||||||||| |||||||| ||||| || |||||||||||||||||||| ||| | || | Sbjct: 1355 tatttctgcttcccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctca 1414 Query: 1464 atgctgcatgcttgctggaatctggagagtcttatcgtaataacttggtaaagagaatag 1523 | ||||||||||||||||| |||| ||||||| || | ||| |||| | |||||||||| Sbjct: 1415 aagctgcatgcttgctggaggctggggagtcttgtcatgatatcttgatcaagagaatag 1474 Query: 1524 gcacccagctggatggtgcttcagttacggaccttcttataccagcaaccagtgccgaaa 1583 |||| || ||||||||||||| ||| ||||||| |||||||| |||| || | ||||| Sbjct: 1475 gcacacaattggatggtgcttctgtttcggacctccttataccggcaaacactagcgaaa 1534 Query: 1584 ccggtgtgtataatgtcgacctgatcatagcaatagtagagcagttcatgtcacatcaca 1643 | | |||||||| |||||||||| |||||||| ||| |||| | || | || | Sbjct: 1535 acacgttatataatgtaaacctgatcattgcaatagtggaggagtttgtttcgcgacaaa 1594 Query: 1644 gtgataatggtaaaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttg 1703 |||||| ||| || |||| ||||||||||||||||| |||||||| || ||||| || Sbjct: 1595 gtgatactggcaagatgaaatttcaagatgatgatgagattgtggaggttgagaacctta 1654 Query: 1704 cttctgtttccagcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcg 1763 || ||||||||||||| ||||| ||| | |||||||| || || |||| ||||||| | Sbjct: 1655 ctcctgtttccagcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctg 1714 Query: 1764 agatcgctaaagaccctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 |||| ||||||||| | || || || || |||||||| ||| |||||||||||||| Sbjct: 1715 agattgctaaagacaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 1773 Score = 208 bits (105), Expect = 8e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 1861 tgccatcgacatgtatctaaaggaacaccccagcctatcaaagagcgaaaagaagagatt 1920 |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1812 tgccattgacatgtatctcaaggagcaccccagcctatcaaagagcgaaaagaaagcatt 1871 Query: 1921 atgtggattgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaa 1980 ||| |||||||||| |||||||| ||||| ||||| || ||| ||||||| |||||||| Sbjct: 1872 atgcagattgatggattgcaagaaactgtcccaggatgcgtgcctgcacgccgtgcagaa 1931 Query: 1981 tgaacggcttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggcatc 2040 || || ||||||||||||||||||||||| |||||||||||||||||| | |||||||| Sbjct: 1932 cgagcgccttcctctgcgtgtggttgtgcaggttctcttctttgagcaaattcgggcatc 1991 Query: 2041 agccgcttc 2049 ||||||||| Sbjct: 1992 agccgcttc 2000 Score = 153 bits (77), Expect = 4e-33 Identities = 149/173 (86%) Strand = Plus / Plus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 2053 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 2112 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 2113 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 2172 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||||||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 2173 gccaacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 2225 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 2280 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 2339 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 2340 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 2393 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 330 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 389 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 390 ttgtggagttctcttcctggttcccatt 417 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 153 tctcctggacccagatcttgatgcaactgccg 184
>dbj|AK065981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046P19, full insert sequence Length = 2707 Score = 831 bits (419), Expect = 0.0 Identities = 1049/1259 (83%) Strand = Plus / Plus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 516 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 575 Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 576 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 635 Query: 684 tttatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagctt 743 ||| |||||||||||| |||||||||||||||||||| | |||||||||| | |||| Sbjct: 636 tttgtcttcacaagtttcctcttttgtcaaagagttcctgcctgcaaagattagctgctt 695 Query: 744 caagtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctg 803 |||| || | |||| ||||||| || || |||| |||||||| |||||||| |||| | Sbjct: 696 caagcaatgtggaaggcaatgaagagttggatatttctgacatccctggtggaccttcag 755 Query: 804 catttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatg 863 |||||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || | Sbjct: 756 catttgaaatctgtgctaagttctgctatggaatgattgtaacactcaatgcgtataacg 815 Query: 864 ttcttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaa 923 ||||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 816 ttcttgctgctcgctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaa 875 Query: 924 atcttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagact 983 | || || ||||||||||| || ||||||||||| ||||| ||||| ||||||| || | Sbjct: 876 acctcatttacaaaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggatt 935 Query: 984 cgatcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaa 1043 | |||||||| ||||| || |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 936 caatcatagtactgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaa 995 Query: 1044 tcaaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagt 1103 ||||||| |||||||| || |||||||||||||| | ||||||||| |||||||| |||| Sbjct: 996 tcaaccattgcattgactcaattgcatcgaaggcattaattgatccatcagaggtcgagt 1055 Query: 1104 ggtcatacacctacaacagaaaaaagctccaatctgagaatggtgttgattctcactgga 1163 |||||||||| ||||||||||| || || | ||| |||||||| |||||||| |||| Sbjct: 1056 ggtcatacacatacaacagaaagaaactgccatcagagaatggccacgattctcattgga 1115 Query: 1164 atggagtcaggatgcaacagatggtccctaaggactggtgggttgaggacctttctgaac 1223 |||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| | Sbjct: 1116 atggtgtcaggaagcaattgatagtccctaaggactggtgggttgaggacctttgtgatc 1175 Query: 1224 ttgaaatggatttgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctg 1283 | || ||||||||||||||||| ||| || | | || || ||||||||||||||| | Sbjct: 1176 tcgagatggatttgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgc 1235 Query: 1284 ctgtagttattggagaagcactaagagcctatgcattccgacgattgtttggttcccttg 1343 || |||| ||||| || || || ||||||||||||| ||| | || | |||||||| | Sbjct: 1236 ctatagtgattggtgaggcgctgagagcctatgcataccgcaggctgctgggttccctag 1295 Query: 1344 aagatgctgtgagcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattg 1403 |||| ||||||||||||||| |||||||||| ||||| ||||| || || |||| ||| Sbjct: 1296 aagacgctgtgagcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatca 1355 Query: 1404 tatttctgctgcccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaa 1463 |||||||||| |||||||| ||||| || |||||||||||||||||||| ||| | || | Sbjct: 1356 tatttctgcttcccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctca 1415 Query: 1464 atgctgcatgcttgctggaatctggagagtcttatcgtaataacttggtaaagagaatag 1523 | ||||||||||||||||| |||| ||||||| || | ||| |||| | |||||||||| Sbjct: 1416 aagctgcatgcttgctggaggctggggagtcttgtcatgatatcttgatcaagagaatag 1475 Query: 1524 gcacccagctggatggtgcttcagttacggaccttcttataccagcaaccagtgccgaaa 1583 |||| || ||||||||||||| ||| ||||||| |||||||| |||| || | ||||| Sbjct: 1476 gcacacaattggatggtgcttctgtttcggacctccttataccggcaaacactagcgaaa 1535 Query: 1584 ccggtgtgtataatgtcgacctgatcatagcaatagtagagcagttcatgtcacatcaca 1643 | | |||||||| |||||||||| |||||||| ||| |||| | || | || | Sbjct: 1536 acacgttatataatgtaaacctgatcattgcaatagtggaggagtttgtttcgcgacaaa 1595 Query: 1644 gtgataatggtaaaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttg 1703 |||||| ||| || |||| ||||||||||||||||| |||||||| || ||||| || Sbjct: 1596 gtgatactggcaagatgaaatttcaagatgatgatgagattgtggaggttgagaacctta 1655 Query: 1704 cttctgtttccagcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcg 1763 || ||||||||||||| ||||| ||| | |||||||| || || |||| ||||||| | Sbjct: 1656 ctcctgtttccagcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctg 1715 Query: 1764 agatcgctaaagaccctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 |||| ||||||||| | || || || || |||||||| ||| |||||||||||||| Sbjct: 1716 agattgctaaagacaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 1774 Score = 208 bits (105), Expect = 8e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 1861 tgccatcgacatgtatctaaaggaacaccccagcctatcaaagagcgaaaagaagagatt 1920 |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1813 tgccattgacatgtatctcaaggagcaccccagcctatcaaagagcgaaaagaaagcatt 1872 Query: 1921 atgtggattgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaa 1980 ||| |||||||||| |||||||| ||||| ||||| || ||| ||||||| |||||||| Sbjct: 1873 atgcagattgatggattgcaagaaactgtcccaggatgcgtgcctgcacgccgtgcagaa 1932 Query: 1981 tgaacggcttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggcatc 2040 || || ||||||||||||||||||||||| |||||||||||||||||| | |||||||| Sbjct: 1933 cgagcgccttcctctgcgtgtggttgtgcaggttctcttctttgagcaaattcgggcatc 1992 Query: 2041 agccgcttc 2049 ||||||||| Sbjct: 1993 agccgcttc 2001 Score = 153 bits (77), Expect = 4e-33 Identities = 149/173 (86%) Strand = Plus / Plus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 2054 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 2113 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 2114 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 2173 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||||||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 2174 gccaacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 2226 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 2281 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 2340 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 2341 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 2394 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 331 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 390 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 391 ttgtggagttctcttcctggttcccatt 418 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 154 tctcctggacccagatcttgatgcaactgccg 185
>dbj|AK065225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G24, full insert sequence Length = 3389 Score = 823 bits (415), Expect = 0.0 Identities = 1048/1259 (83%) Strand = Plus / Plus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 1209 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 1268 Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1269 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 1328 Query: 684 tttatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagctt 743 ||| |||||||||||| |||||||||||||||||||| | |||||||||| | |||| Sbjct: 1329 tttgtcttcacaagtttcctcttttgtcaaagagttcctgcctgcaaagattagctgctt 1388 Query: 744 caagtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctg 803 |||| || | |||| ||||||| || || |||| |||||||| |||||||| |||| | Sbjct: 1389 caagcaatgtggaaggcaatgaagagttggatatttctgacatccctggtggaccttcag 1448 Query: 804 catttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatg 863 |||||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || | Sbjct: 1449 catttgaaatctgtgctaagttctgctatggaatgattgtaacactcaatgcgtataacg 1508 Query: 864 ttcttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaa 923 ||||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1509 ttcttgctgctcgctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaa 1568 Query: 924 atcttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagact 983 | || || ||||||||||| || ||||||||||| ||||| ||||| ||||||| || | Sbjct: 1569 acctcatttacaaaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggatt 1628 Query: 984 cgatcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaa 1043 | |||||||| ||||| || |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 1629 caatcatagtactgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaa 1688 Query: 1044 tcaaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagt 1103 ||||||| |||||||| || |||||||||||||| | ||||||||| |||||||| |||| Sbjct: 1689 tcaaccattgcattgactcaattgcatcgaaggcattaattgatccatcagaggtcgagt 1748 Query: 1104 ggtcatacacctacaacagaaaaaagctccaatctgagaatggtgttgattctcactgga 1163 |||||||||| ||||||||||| || || | ||| |||||||| |||||||| |||| Sbjct: 1749 ggtcatacacatacaacagaaagaaactgccatcagagaatggccacgattctcattgga 1808 Query: 1164 atggagtcaggatgcaacagatggtccctaaggactggtgggttgaggacctttctgaac 1223 |||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| | Sbjct: 1809 atggtgtcaggaagcaattgatagtccctaaggactggtgggttgaggacctttgtgatc 1868 Query: 1224 ttgaaatggatttgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctg 1283 | || ||||||||||||||||| ||| || | | || || ||||||||||||||| | Sbjct: 1869 tcgagatggatttgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgc 1928 Query: 1284 ctgtagttattggagaagcactaagagcctatgcattccgacgattgtttggttcccttg 1343 || |||| ||||| || || || ||||||||||||| ||| | || | |||||||| | Sbjct: 1929 ctatagtgattggtgaggcgctgagagcctatgcataccgcaggctgctgggttccctag 1988 Query: 1344 aagatgctgtgagcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattg 1403 |||| ||||||||||||||| |||||||||| ||||| ||||| || || |||| ||| Sbjct: 1989 aagacgctgtgagcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatca 2048 Query: 1404 tatttctgctgcccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaa 1463 |||||||||| |||||||| ||||| || |||||||||||||||||||| ||| | || | Sbjct: 2049 tatttctgcttcccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctca 2108 Query: 1464 atgctgcatgcttgctggaatctggagagtcttatcgtaataacttggtaaagagaatag 1523 | ||||||||||||||||| |||| ||||||| || | ||| |||| | |||||||||| Sbjct: 2109 aagctgcatgcttgctggaggctggggagtcttgtcatgatatcttgatcaagagaatag 2168 Query: 1524 gcacccagctggatggtgcttcagttacggaccttcttataccagcaaccagtgccgaaa 1583 |||| || ||||||||||||| ||| ||||||| |||||||| |||| || | ||||| Sbjct: 2169 gcacacaattggatggtgcttctgtttcggacctccttataccggcaaacactagcgaaa 2228 Query: 1584 ccggtgtgtataatgtcgacctgatcatagcaatagtagagcagttcatgtcacatcaca 1643 | | |||||||| |||||||||| |||||||| ||| || | | || | || | Sbjct: 2229 acacgttatataatgtaaacctgatcattgcaatagtggaggagattgtttcgcgacaaa 2288 Query: 1644 gtgataatggtaaaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttg 1703 |||||| ||| || |||| ||||||||||||||||| |||||||| || ||||| || Sbjct: 2289 gtgatactggcaagatgaaatttcaagatgatgatgagattgtggaggttgagaacctta 2348 Query: 1704 cttctgtttccagcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcg 1763 || ||||||||||||| ||||| ||| | |||||||| || || |||| ||||||| | Sbjct: 2349 ctcctgtttccagcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctg 2408 Query: 1764 agatcgctaaagaccctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 |||| ||||||||| | || || || || |||||||| ||| |||||||||||||| Sbjct: 2409 agattgctaaagacaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 2467 Score = 208 bits (105), Expect = 8e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 1861 tgccatcgacatgtatctaaaggaacaccccagcctatcaaagagcgaaaagaagagatt 1920 |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 2506 tgccattgacatgtatctcaaggagcaccccagcctatcaaagagcgaaaagaaagcatt 2565 Query: 1921 atgtggattgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaa 1980 ||| |||||||||| |||||||| ||||| ||||| || ||| ||||||| |||||||| Sbjct: 2566 atgcagattgatggattgcaagaaactgtcccaggatgcgtgcctgcacgccgtgcagaa 2625 Query: 1981 tgaacggcttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggcatc 2040 || || ||||||||||||||||||||||| |||||||||||||||||| | |||||||| Sbjct: 2626 cgagcgccttcctctgcgtgtggttgtgcaggttctcttctttgagcaaattcgggcatc 2685 Query: 2041 agccgcttc 2049 ||||||||| Sbjct: 2686 agccgcttc 2694 Score = 145 bits (73), Expect = 1e-30 Identities = 148/173 (85%) Strand = Plus / Plus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 2747 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 2806 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 2807 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 2866 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||| ||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 2867 gccgacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 2919 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 2974 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 3033 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 3034 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 3087 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 1024 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 1083 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 1084 ttgtggagttctcttcctggttcccatt 1111 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 845 tctcctggacccagatcttgatgcaactgccg 876
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 664 bits (335), Expect = 0.0 Identities = 929/1127 (82%) Strand = Plus / Minus Query: 696 agttccctcttttgtcaaagagttcacgattgcaaagattggtagcttcaagtaacgagg 755 |||| |||||||||||||||||||| | |||||||||| | |||||||| || | || Sbjct: 70101 agtttcctcttttgtcaaagagttcctgcctgcaaagattagctgcttcaagcaatgtgg 70042 Query: 756 aaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaattt 815 || ||||||| || || |||| |||||||| |||||||| |||| ||||||||||| | Sbjct: 70041 aaggcaatgaagagttggatatttctgacatccctggtggaccttcagcatttgaaatct 69982 Query: 816 gtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgctc 875 |||| ||||| ||||| || |||||||||||||||||||| || || ||||||||||||| Sbjct: 69981 gtgctaagttctgctatggaatgattgtaacactcaatgcgtataacgttcttgctgctc 69922 Query: 876 gttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctaca 935 | || ||||||||||| |||||||||||||| |||||||| |||||||| || || |||| Sbjct: 69921 gctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaaacctcatttaca 69862 Query: 936 aaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcgatcatagttc 995 ||||||| || ||||||||||| ||||| ||||| ||||||| || || |||||||| | Sbjct: 69861 aaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggattcaatcatagtac 69802 Query: 996 tgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatcaaccactgca 1055 |||| || |||||||| ||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 69801 tgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaatcaaccattgca 69742 Query: 1056 ttgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtggtcatacacct 1115 |||| || |||||||||||||| | ||||||||| |||||||| |||||||||||||| | Sbjct: 69741 ttgactcaattgcatcgaaggcattaattgatccatcagaggtcgagtggtcatacacat 69682 Query: 1116 acaacagaaaaaagctccaatctgagaatggtgttgattctcactggaatggagtcagga 1175 |||||||||| || || | ||| |||||||| |||||||| |||||||| ||||||| Sbjct: 69681 acaacagaaagaaactgccatcagagaatggccacgattctcattggaatggtgtcagga 69622 Query: 1176 tgcaacagatggtccctaaggactggtgggttgaggacctttctgaacttgaaatggatt 1235 |||| ||| ||||||||||||||||||||||||||||||| ||| || || ||||||| Sbjct: 69621 agcaattgatagtccctaaggactggtgggttgaggacctttgtgatctcgagatggatt 69562 Query: 1236 tgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctgctgtagttattg 1295 |||||||||| ||| || | | || || ||||||||||||||| | || |||| |||| Sbjct: 69561 tgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgcctatagtgattg 69502 Query: 1296 gagaagcactaagagcctatgcattccgacgattgtttggttcccttgaagatgctgtga 1355 | || || || ||||||||||||| ||| | || | |||||||| ||||| ||||||| Sbjct: 69501 gtgaggcgctgagagcctatgcataccgcaggctgctgggttccctagaagacgctgtga 69442 Query: 1356 gcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattgtatttctgctgc 1415 |||||||| |||||||||| ||||| ||||| || || |||| ||| |||||||||| | Sbjct: 69441 gcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatcatatttctgcttc 69382 Query: 1416 ccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaaatgctgcatgct 1475 ||||||| ||||| || |||||||||||||||||||| ||| | || || |||||||||| Sbjct: 69381 ccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctcaaagctgcatgct 69322 Query: 1476 tgctggaatctggagagtcttatcgtaataacttggtaaagagaataggcacccagctgg 1535 ||||||| |||| ||||||| || | ||| |||| | |||||||||||||| || ||| Sbjct: 69321 tgctggaggctggggagtcttgtcatgatatcttgatcaagagaataggcacacaattgg 69262 Query: 1536 atggtgcttcagttacggaccttcttataccagcaaccagtgccgaaaccggtgtgtata 1595 |||||||||| ||| ||||||| |||||||| |||| || | ||||| | | |||| Sbjct: 69261 atggtgcttctgtttcggacctccttataccggcaaacactagcgaaaacacgttatata 69202 Query: 1596 atgtcgacctgatcatagcaatagtagagcagttcatgtcacatcacagtgataatggta 1655 |||| |||||||||| |||||||| ||| |||| | || | || ||||||| ||| | Sbjct: 69201 atgtaaacctgatcattgcaatagtggaggagtttgtttcgcgacaaagtgatactggca 69142 Query: 1656 aaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttgcttctgtttcca 1715 | |||| ||||||||||||||||| |||||||| || ||||| || || ||||||||| Sbjct: 69141 agatgaaatttcaagatgatgatgagattgtggaggttgagaaccttactcctgtttcca 69082 Query: 1716 gcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcgagatcgctaaag 1775 |||| ||||| ||| | |||||||| || || |||| ||||||| ||||| ||||||| Sbjct: 69081 gcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctgagattgctaaag 69022 Query: 1776 accctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 || | || || || || |||||||| ||| |||||||||||||| Sbjct: 69021 acaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 68975 Score = 184 bits (93), Expect = 1e-42 Identities = 150/169 (88%) Strand = Plus / Minus Query: 1881 aggaacaccccagcctatcaaagagcgaaaagaagagattatgtggattgatggactgca 1940 |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||| Sbjct: 68830 aggagcaccccagcctatcaaagagcgaaaagaaagcattatgcagattgatggattgca 68771 Query: 1941 agaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggcttcctctgcgtg 2000 |||| ||||| ||||| || ||| ||||||| |||||||| || || ||||||||||||| Sbjct: 68770 agaaactgtcccaggatgcgtgcctgcacgccgtgcagaacgagcgccttcctctgcgtg 68711 Query: 2001 tggttgtgcaagttctcttctttgagcaagtccgggcatcagccgcttc 2049 |||||||||| |||||||||||||||||| | ||||||||||||||||| Sbjct: 68710 tggttgtgcaggttctcttctttgagcaaattcgggcatcagccgcttc 68662 Score = 153 bits (77), Expect = 4e-33 Identities = 149/173 (86%) Strand = Plus / Minus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 68609 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 68550 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 68549 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 68490 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||||||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 68489 gccaacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 68437 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 68382 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 68323 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 68322 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 68269 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 70811 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 70752 Query: 684 tttatcttcacaag 697 ||| |||||||||| Sbjct: 70751 tttgtcttcacaag 70738 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 73069 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 73010 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 73009 ttgtggagttctcttcctggttcccatt 72982 Score = 75.8 bits (38), Expect = 8e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 72884 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 72825 Query: 624 tcaggt 629 |||||| Sbjct: 72824 tcaggt 72819 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 73246 tctcctggacccagatcttgatgcaactgccg 73215
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 664 bits (335), Expect = 0.0 Identities = 929/1127 (82%) Strand = Plus / Minus Query: 696 agttccctcttttgtcaaagagttcacgattgcaaagattggtagcttcaagtaacgagg 755 |||| |||||||||||||||||||| | |||||||||| | |||||||| || | || Sbjct: 2700 agtttcctcttttgtcaaagagttcctgcctgcaaagattagctgcttcaagcaatgtgg 2641 Query: 756 aaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaattt 815 || ||||||| || || |||| |||||||| |||||||| |||| ||||||||||| | Sbjct: 2640 aaggcaatgaagagttggatatttctgacatccctggtggaccttcagcatttgaaatct 2581 Query: 816 gtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgctc 875 |||| ||||| ||||| || |||||||||||||||||||| || || ||||||||||||| Sbjct: 2580 gtgctaagttctgctatggaatgattgtaacactcaatgcgtataacgttcttgctgctc 2521 Query: 876 gttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctaca 935 | || ||||||||||| |||||||||||||| |||||||| |||||||| || || |||| Sbjct: 2520 gctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaaacctcatttaca 2461 Query: 936 aaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcgatcatagttc 995 ||||||| || ||||||||||| ||||| ||||| ||||||| || || |||||||| | Sbjct: 2460 aaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggattcaatcatagtac 2401 Query: 996 tgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatcaaccactgca 1055 |||| || |||||||| ||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 2400 tgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaatcaaccattgca 2341 Query: 1056 ttgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtggtcatacacct 1115 |||| || |||||||||||||| | ||||||||| |||||||| |||||||||||||| | Sbjct: 2340 ttgactcaattgcatcgaaggcattaattgatccatcagaggtcgagtggtcatacacat 2281 Query: 1116 acaacagaaaaaagctccaatctgagaatggtgttgattctcactggaatggagtcagga 1175 |||||||||| || || | ||| |||||||| |||||||| |||||||| ||||||| Sbjct: 2280 acaacagaaagaaactgccatcagagaatggccacgattctcattggaatggtgtcagga 2221 Query: 1176 tgcaacagatggtccctaaggactggtgggttgaggacctttctgaacttgaaatggatt 1235 |||| ||| ||||||||||||||||||||||||||||||| ||| || || ||||||| Sbjct: 2220 agcaattgatagtccctaaggactggtgggttgaggacctttgtgatctcgagatggatt 2161 Query: 1236 tgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctgctgtagttattg 1295 |||||||||| ||| || | | || || ||||||||||||||| | || |||| |||| Sbjct: 2160 tgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgcctatagtgattg 2101 Query: 1296 gagaagcactaagagcctatgcattccgacgattgtttggttcccttgaagatgctgtga 1355 | || || || ||||||||||||| ||| | || | |||||||| ||||| ||||||| Sbjct: 2100 gtgaggcgctgagagcctatgcataccgcaggctgctgggttccctagaagacgctgtga 2041 Query: 1356 gcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattgtatttctgctgc 1415 |||||||| |||||||||| ||||| ||||| || || |||| ||| |||||||||| | Sbjct: 2040 gcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatcatatttctgcttc 1981 Query: 1416 ccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaaatgctgcatgct 1475 ||||||| ||||| || |||||||||||||||||||| ||| | || || |||||||||| Sbjct: 1980 ccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctcaaagctgcatgct 1921 Query: 1476 tgctggaatctggagagtcttatcgtaataacttggtaaagagaataggcacccagctgg 1535 ||||||| |||| ||||||| || | ||| |||| | |||||||||||||| || ||| Sbjct: 1920 tgctggaggctggggagtcttgtcatgatatcttgatcaagagaataggcacacaattgg 1861 Query: 1536 atggtgcttcagttacggaccttcttataccagcaaccagtgccgaaaccggtgtgtata 1595 |||||||||| ||| ||||||| |||||||| |||| || | ||||| | | |||| Sbjct: 1860 atggtgcttctgtttcggacctccttataccggcaaacactagcgaaaacacgttatata 1801 Query: 1596 atgtcgacctgatcatagcaatagtagagcagttcatgtcacatcacagtgataatggta 1655 |||| |||||||||| |||||||| ||| |||| | || | || ||||||| ||| | Sbjct: 1800 atgtaaacctgatcattgcaatagtggaggagtttgtttcgcgacaaagtgatactggca 1741 Query: 1656 aaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttgcttctgtttcca 1715 | |||| ||||||||||||||||| |||||||| || ||||| || || ||||||||| Sbjct: 1740 agatgaaatttcaagatgatgatgagattgtggaggttgagaaccttactcctgtttcca 1681 Query: 1716 gcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcgagatcgctaaag 1775 |||| ||||| ||| | |||||||| || || |||| ||||||| ||||| ||||||| Sbjct: 1680 gcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctgagattgctaaag 1621 Query: 1776 accctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 || | || || || || |||||||| ||| |||||||||||||| Sbjct: 1620 acaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 1574 Score = 184 bits (93), Expect = 1e-42 Identities = 150/169 (88%) Strand = Plus / Minus Query: 1881 aggaacaccccagcctatcaaagagcgaaaagaagagattatgtggattgatggactgca 1940 |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||| Sbjct: 1429 aggagcaccccagcctatcaaagagcgaaaagaaagcattatgcagattgatggattgca 1370 Query: 1941 agaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggcttcctctgcgtg 2000 |||| ||||| ||||| || ||| ||||||| |||||||| || || ||||||||||||| Sbjct: 1369 agaaactgtcccaggatgcgtgcctgcacgccgtgcagaacgagcgccttcctctgcgtg 1310 Query: 2001 tggttgtgcaagttctcttctttgagcaagtccgggcatcagccgcttc 2049 |||||||||| |||||||||||||||||| | ||||||||||||||||| Sbjct: 1309 tggttgtgcaggttctcttctttgagcaaattcgggcatcagccgcttc 1261 Score = 153 bits (77), Expect = 4e-33 Identities = 149/173 (86%) Strand = Plus / Minus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 1208 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 1149 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 1148 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 1089 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||||||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 1088 gccaacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 1036 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 981 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 922 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 921 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 868 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 3410 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 3351 Query: 684 tttatcttcacaag 697 ||| |||||||||| Sbjct: 3350 tttgtcttcacaag 3337 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 5668 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 5609 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 5608 ttgtggagttctcttcctggttcccatt 5581 Score = 75.8 bits (38), Expect = 8e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 5483 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 5424 Query: 624 tcaggt 629 |||||| Sbjct: 5423 tcaggt 5418 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 5845 tctcctggacccagatcttgatgcaactgccg 5814
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 664 bits (335), Expect = 0.0 Identities = 929/1127 (82%) Strand = Plus / Minus Query: 696 agttccctcttttgtcaaagagttcacgattgcaaagattggtagcttcaagtaacgagg 755 |||| |||||||||||||||||||| | |||||||||| | |||||||| || | || Sbjct: 22793198 agtttcctcttttgtcaaagagttcctgcctgcaaagattagctgcttcaagcaatgtgg 22793139 Query: 756 aaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaattt 815 || ||||||| || || |||| |||||||| |||||||| |||| ||||||||||| | Sbjct: 22793138 aaggcaatgaagagttggatatttctgacatccctggtggaccttcagcatttgaaatct 22793079 Query: 816 gtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgctc 875 |||| ||||| ||||| || |||||||||||||||||||| || || ||||||||||||| Sbjct: 22793078 gtgctaagttctgctatggaatgattgtaacactcaatgcgtataacgttcttgctgctc 22793019 Query: 876 gttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctaca 935 | || ||||||||||| |||||||||||||| |||||||| |||||||| || || |||| Sbjct: 22793018 gctgtgcagctgagtatctagaaatgtttgaaaccattgagaaaggaaacctcatttaca 22792959 Query: 936 aaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcgatcatagttc 995 ||||||| || ||||||||||| ||||| ||||| ||||||| || || |||||||| | Sbjct: 22792958 aaattgatgtcttcttgacatcaagcatatttcgtgcctggaaggattcaatcatagtac 22792899 Query: 996 tgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatcaaccactgca 1055 |||| || |||||||| ||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 22792898 tgcagagcacaaagtcattgctaccttggtctgaaaatttgaaagtaatcaaccattgca 22792839 Query: 1056 ttgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtggtcatacacct 1115 |||| || |||||||||||||| | ||||||||| |||||||| |||||||||||||| | Sbjct: 22792838 ttgactcaattgcatcgaaggcattaattgatccatcagaggtcgagtggtcatacacat 22792779 Query: 1116 acaacagaaaaaagctccaatctgagaatggtgttgattctcactggaatggagtcagga 1175 |||||||||| || || | ||| |||||||| |||||||| |||||||| ||||||| Sbjct: 22792778 acaacagaaagaaactgccatcagagaatggccacgattctcattggaatggtgtcagga 22792719 Query: 1176 tgcaacagatggtccctaaggactggtgggttgaggacctttctgaacttgaaatggatt 1235 |||| ||| ||||||||||||||||||||||||||||||| ||| || || ||||||| Sbjct: 22792718 agcaattgatagtccctaaggactggtgggttgaggacctttgtgatctcgagatggatt 22792659 Query: 1236 tgtacaagcgtgtgctcctaacaatcaaggcaaagggaagaacacctgctgtagttattg 1295 |||||||||| ||| || | | || || ||||||||||||||| | || |||| |||| Sbjct: 22792658 tgtacaagcgggtgatcatgatgataaaagcaaagggaagaacatcgcctatagtgattg 22792599 Query: 1296 gagaagcactaagagcctatgcattccgacgattgtttggttcccttgaagatgctgtga 1355 | || || || ||||||||||||| ||| | || | |||||||| ||||| ||||||| Sbjct: 22792598 gtgaggcgctgagagcctatgcataccgcaggctgctgggttccctagaagacgctgtga 22792539 Query: 1356 gcaatggaattgattgcacaaaacgtcgtgcagttctcgaaagcattgtatttctgctgc 1415 |||||||| |||||||||| ||||| ||||| || || |||| ||| |||||||||| | Sbjct: 22792538 gcaatggagttgattgcactaaacgccgtgccgtgcttgaaaccatcatatttctgcttc 22792479 Query: 1416 ccactgaaaaaggttcagtgtcatgtggttttcttctcaagttactaaatgctgcatgct 1475 ||||||| ||||| || |||||||||||||||||||| ||| | || || |||||||||| Sbjct: 22792478 ccactgagaaaggctccgtgtcatgtggttttcttcttaagcttctcaaagctgcatgct 22792419 Query: 1476 tgctggaatctggagagtcttatcgtaataacttggtaaagagaataggcacccagctgg 1535 ||||||| |||| ||||||| || | ||| |||| | |||||||||||||| || ||| Sbjct: 22792418 tgctggaggctggggagtcttgtcatgatatcttgatcaagagaataggcacacaattgg 22792359 Query: 1536 atggtgcttcagttacggaccttcttataccagcaaccagtgccgaaaccggtgtgtata 1595 |||||||||| ||| ||||||| |||||||| |||| || | ||||| | | |||| Sbjct: 22792358 atggtgcttctgtttcggacctccttataccggcaaacactagcgaaaacacgttatata 22792299 Query: 1596 atgtcgacctgatcatagcaatagtagagcagttcatgtcacatcacagtgataatggta 1655 |||| |||||||||| |||||||| ||| |||| | || | || ||||||| ||| | Sbjct: 22792298 atgtaaacctgatcattgcaatagtggaggagtttgtttcgcgacaaagtgatactggca 22792239 Query: 1656 aaatgacttttcaagatgatgatgaaattgtggaagtcgagaagtttgcttctgtttcca 1715 | |||| ||||||||||||||||| |||||||| || ||||| || || ||||||||| Sbjct: 22792238 agatgaaatttcaagatgatgatgagattgtggaggttgagaaccttactcctgtttcca 22792179 Query: 1716 gcacgtcaaagctgacggttgcaaagctgatcgatgaatatcttggcgagatcgctaaag 1775 |||| ||||| ||| | |||||||| || || |||| ||||||| ||||| ||||||| Sbjct: 22792178 gcacctcaaatctggctgttgcaaatcttattgatgggtatcttgctgagattgctaaag 22792119 Query: 1776 accctaacctgcctgttctgaagttcattgcacttgctgaaatggtg 1822 || | || || || || |||||||| ||| |||||||||||||| Sbjct: 22792118 acaccaatcttcccctttcaaagttcatcgcaattgctgaaatggtg 22792072 Score = 184 bits (93), Expect = 1e-42 Identities = 150/169 (88%) Strand = Plus / Minus Query: 1881 aggaacaccccagcctatcaaagagcgaaaagaagagattatgtggattgatggactgca 1940 |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||| Sbjct: 22791927 aggagcaccccagcctatcaaagagcgaaaagaaagcattatgcagattgatggattgca 22791868 Query: 1941 agaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggcttcctctgcgtg 2000 |||| ||||| ||||| || ||| ||||||| |||||||| || || ||||||||||||| Sbjct: 22791867 agaaactgtcccaggatgcgtgcctgcacgccgtgcagaacgagcgccttcctctgcgtg 22791808 Query: 2001 tggttgtgcaagttctcttctttgagcaagtccgggcatcagccgcttc 2049 |||||||||| |||||||||||||||||| | ||||||||||||||||| Sbjct: 22791807 tggttgtgcaggttctcttctttgagcaaattcgggcatcagccgcttc 22791759 Score = 153 bits (77), Expect = 4e-33 Identities = 149/173 (86%) Strand = Plus / Minus Query: 2102 cccagagagaatggcaactcttatggcagctccaggtcagccgccacaacaaccacggaa 2161 |||||||||||||| ||||| |||||||||||||||||||| ||||| || || || || Sbjct: 22791706 cccagagagaatggaaactcctatggcagctccaggtcagcggccaccacgacaaccgag 22791647 Query: 2162 gaggaaggtagtggagtccctacatccagcgacatcaactctttcaggtcgatgaggctc 2221 ||||| || | || ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 22791646 gaggacgggaccggggtcccgacctccagcgacatcaactcgttcagttcactgaggctg 22791587 Query: 2222 gccaacaactgcggtggtagcgagaggagcagtgccagcagcgacatcaacaa 2274 ||||||||| |||| || |||||||||||||||| |||||||||||||||||| Sbjct: 22791586 gccaacaacagcgggggcagcgagaggagcagtggcagcagcgacatcaacaa 22791534 Score = 115 bits (58), Expect = 9e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 |||||| || |||||||||||||| |||||||| ||| | |||||||||| |||||||| Sbjct: 22791479 gaagatcctgagcaagctctggtccgggaaaacaaacgccagcgagaacagtagctcgga 22791420 Query: 2386 cacgtcggagagccccgggtccgccaacccggaggaggtgaagtctacaccgtc 2439 ||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| Sbjct: 22791419 cacgtcggagagccctgggtcactcaacccggaggaggtgaagtccacaacgtc 22791366 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 22793908 tcaggtttgttgcaacggaactggcaacagacattgttatttccataggagatgtcaagt 22793849 Query: 684 tttatcttcacaag 697 ||| |||||||||| Sbjct: 22793848 tttgtcttcacaag 22793835 Score = 79.8 bits (40), Expect = 5e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 374 ttcacatggcagtggccaccggtttggtgctttgttgatgggttaagtgttgcgggtttg 433 ||||||||||||||||| |||||||||| | || ||||||||||||||| || ||||||| Sbjct: 22796166 ttcacatggcagtggccgccggtttggtacattcttgatgggttaagtgctgtgggtttg 22796107 Query: 434 ttgaggcgtt-tcttcttggctcccatt 460 ||| || ||| ||||| ||| ||||||| Sbjct: 22796106 ttgtggagttctcttcctggttcccatt 22796079 Score = 75.8 bits (38), Expect = 8e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 564 caatgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaata 623 |||||||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 22795981 caatgaagcatatgaaacttggatcaaagccagacctcttccagacagaaggcggcaata 22795922 Query: 624 tcaggt 629 |||||| Sbjct: 22795921 tcaggt 22795916 Score = 56.0 bits (28), Expect = 7e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 213 tctcttggacccagatcttgatgcaactgccg 244 |||| ||||||||||||||||||||||||||| Sbjct: 22796343 tctcctggacccagatcttgatgcaactgccg 22796312 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 5499656 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 5499714
>emb|CT832224.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA218E11, full insert sequence Length = 2633 Score = 248 bits (125), Expect = 9e-62 Identities = 449/557 (80%) Strand = Plus / Plus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 638 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 697 Query: 626 aggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagttt 685 |||||||| ||||| ||| ||||||| |||||||| ||| |||| || || |||||| Sbjct: 698 aggtttgtcgcaactgagttggcaacggacatcgtaatcattgtaggggaagtgaagttt 757 Query: 686 tatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagcttca 745 |||||||||||||||||||||||||| |||||||| |||||||||| |||||| || || Sbjct: 758 tatcttcacaagttccctcttttgtcgaagagttcgcgattgcaaacattggtggcatcg 817 Query: 746 agtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgca 805 | ||||| || ||||| || ||| | | || || ||||| || || || || | ||| Sbjct: 818 acaaacgaagagagcaacgacgaaatagacatctccgacatcccggggggacctgcagca 877 Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgtt 865 || || || ||||||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct: 878 ttcgagatctgtgccaagttctgctatggcatgatcgtcaccctcaacgcgtacaacgtc 937 Query: 866 cttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaat 925 || || || || |||||||| ||||| || || ||||| ||||| || ||||| || || Sbjct: 938 ctcgcagcccgctgcgcagccgagtatcttgagatgttcgagacgatcgacaaggggaac 997 Query: 926 cttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcg 985 || |||||||| || || |||||| || | || ||||| || | |||||||| ||||| Sbjct: 998 ctcatctacaagatcgatgtgttcctgtcctcaagcatattcagaacctggaaggactcc 1057 Query: 986 atcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatc 1045 ||||| ||||| || | || ||||| ||||||||||||| ||||| | ||||| ||| Sbjct: 1058 atcatcgttcttcagacaaccaagtcactgctgccatggtcggagaacctcaaggtgatc 1117 Query: 1046 aaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtgg 1105 ||||||||| | ||||| || || ||||||| || || ||||||||||||||||||||| Sbjct: 1118 aaccactgcgtcgattcgatcgcgacgaaggcctccatcgatccgtcagaggttgagtgg 1177 Query: 1106 tcatacacctacaacag 1122 ||||||||||||||||| Sbjct: 1178 tcatacacctacaacag 1194 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 ||||||||| |||||||| |||||||| || | | || |||||||||||||||||| || Sbjct: 2410 gaagatactgagcaagctgtggtctggcaaggcaagcagcggcgagaacagcagctccga 2469 Query: 2386 cacgtcggagagccccgg 2403 |||||||||||||||||| Sbjct: 2470 cacgtcggagagccccgg 2487 Score = 73.8 bits (37), Expect = 3e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 |||||||||||||||||||||| | |||||| |||||||||| |||||||| || || | Sbjct: 2016 tgatggactgcaagaagctgtcgccggaggcgagcatgcacgccgtgcagaacgagcgcc 2075 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggc 2037 | || || || || || ||||| || |||||||| ||||| |||||||| Sbjct: 2076 tcccgctccgcgtcgtcgtgcaggtcctcttcttcgagcaggtccgggc 2124
>ref|NM_001073679.1| Oryza sativa (japonica cultivar-group) Os12g0583500 (Os12g0583500) mRNA, complete cds Length = 3054 Score = 248 bits (125), Expect = 9e-62 Identities = 449/557 (80%) Strand = Plus / Plus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 644 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 703 Query: 626 aggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagttt 685 |||||||| ||||| ||| ||||||| |||||||| ||| |||| || || |||||| Sbjct: 704 aggtttgtcgcaactgagttggcaacggacatcgtaatcattgtaggggaagtgaagttt 763 Query: 686 tatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagcttca 745 |||||||||||||||||||||||||| |||||||| |||||||||| |||||| || || Sbjct: 764 tatcttcacaagttccctcttttgtcgaagagttcgcgattgcaaacattggtggcatcg 823 Query: 746 agtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgca 805 | ||||| || ||||| || ||| | | || || ||||| || || || || | ||| Sbjct: 824 acaaacgaagagagcaacgacgaaatagacatctccgacatcccggggggacctgcagca 883 Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgtt 865 || || || ||||||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct: 884 ttcgagatctgtgccaagttctgctatggcatgatcgtcaccctcaacgcgtacaacgtc 943 Query: 866 cttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaat 925 || || || || |||||||| ||||| || || ||||| ||||| || ||||| || || Sbjct: 944 ctcgcagcccgctgcgcagccgagtatcttgagatgttcgagacgatcgacaaggggaac 1003 Query: 926 cttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcg 985 || |||||||| || || |||||| || | || ||||| || | |||||||| ||||| Sbjct: 1004 ctcatctacaagatcgatgtgttcctgtcctcaagcatattcagaacctggaaggactcc 1063 Query: 986 atcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatc 1045 ||||| ||||| || | || ||||| ||||||||||||| ||||| | ||||| ||| Sbjct: 1064 atcatcgttcttcagacaaccaagtcactgctgccatggtcggagaacctcaaggtgatc 1123 Query: 1046 aaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtgg 1105 ||||||||| | ||||| || || ||||||| || || ||||||||||||||||||||| Sbjct: 1124 aaccactgcgtcgattcgatcgcgacgaaggcctccatcgatccgtcagaggttgagtgg 1183 Query: 1106 tcatacacctacaacag 1122 ||||||||||||||||| Sbjct: 1184 tcatacacctacaacag 1200 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 ||||||||| |||||||| |||||||| || ||| || |||||||||||||||||| || Sbjct: 2431 gaagatactgagcaagctgtggtctggcaaggcgagcagcggcgagaacagcagctccga 2490 Query: 2386 cacgtcggagagccccgg 2403 |||||||||||||||||| Sbjct: 2491 cacgtcggagagccccgg 2508 Score = 73.8 bits (37), Expect = 3e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 |||||||||||||||||||||| | |||||| |||||||||| |||||||| || || | Sbjct: 2022 tgatggactgcaagaagctgtcgccggaggcgagcatgcacgccgtgcagaacgagcgcc 2081 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggc 2037 | || || || || || ||||| || |||||||| ||||| |||||||| Sbjct: 2082 tcccgctccgcgtcgtcgtgcaggtcctcttcttcgagcaggtccgggc 2130
>dbj|AK071898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059B05, full insert sequence Length = 3055 Score = 232 bits (117), Expect = 5e-57 Identities = 448/557 (80%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 646 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 705 Query: 626 aggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagttt 685 ||||| || ||||| ||| ||||||| |||||||| ||| |||| || || |||||| Sbjct: 706 aggtt-gtcgcaactgagttggcaacggacatcgtaatcattgtaggggaagtgaagttt 764 Query: 686 tatcttcacaagttccctcttttgtcaaagagttcacgattgcaaagattggtagcttca 745 |||||||||||||||||||||||||| |||||||| |||||||||| |||||| || || Sbjct: 765 tatcttcacaagttccctcttttgtcgaagagttcgcgattgcaaacattggtggcatcg 824 Query: 746 agtaacgaggaaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgca 805 | ||||| || ||||| || ||| | | || || ||||| || || || || | ||| Sbjct: 825 acaaacgaagagagcaacgacgaaatagacatctccgacatcccggggggacctgcagca 884 Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgtt 865 || || || ||||||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct: 885 ttcgagatctgtgccaagttctgctatggcatgatcgtcaccctcaacgcgtacaacgtc 944 Query: 866 cttgctgctcgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaat 925 || || || || |||||||| ||||| || || ||||| ||||| || ||||| || || Sbjct: 945 ctcgcagcccgctgcgcagccgagtatcttgagatgttcgagacgatcgacaaggggaac 1004 Query: 926 cttatctacaaaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcg 985 || |||||||| || || |||||| || | || ||||| || | |||||||| ||||| Sbjct: 1005 ctcatctacaagatcgatgtgttcctgtcctcaagcatattcagaacctggaaggactcc 1064 Query: 986 atcatagttctgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatc 1045 ||||| ||||| || | || ||||| ||||||||||||| ||||| | ||||| ||| Sbjct: 1065 atcatcgttcttcagacaaccaagtcactgctgccatggtcggagaacctcaaggtgatc 1124 Query: 1046 aaccactgcattgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtgg 1105 ||||||||| | ||||| || || ||||||| || || ||||||||||||||||||||| Sbjct: 1125 aaccactgcgtcgattcgatcgcgacgaaggcctccatcgatccgtcagaggttgagtgg 1184 Query: 1106 tcatacacctacaacag 1122 ||||||||||||||||| Sbjct: 1185 tcatacacctacaacag 1201 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Plus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 ||||||||| |||||||| |||||||| || ||| || |||||||||||||||||| || Sbjct: 2432 gaagatactgagcaagctgtggtctggcaaggcgagcagcggcgagaacagcagctccga 2491 Query: 2386 cacgtcggagagccccgg 2403 |||||||||||||||||| Sbjct: 2492 cacgtcggagagccccgg 2509 Score = 73.8 bits (37), Expect = 3e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 |||||||||||||||||||||| | |||||| |||||||||| |||||||| || || | Sbjct: 2023 tgatggactgcaagaagctgtcgccggaggcgagcatgcacgccgtgcagaacgagcgcc 2082 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggc 2037 | || || || || || ||||| || |||||||| ||||| |||||||| Sbjct: 2083 tcccgctccgcgtcgtcgtgcaggtcctcttcttcgagcaggtccgggc 2131
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 157 bits (79), Expect = 3e-34 Identities = 340/427 (79%) Strand = Plus / Minus Query: 696 agttccctcttttgtcaaagagttcacgattgcaaagattggtagcttcaagtaacgagg 755 |||||||||||||||| |||||||| |||||||||| |||||| || || | ||||| | Sbjct: 24254761 agttccctcttttgtcgaagagttcgcgattgcaaacattggtggcatcgacaaacgaag 24254702 Query: 756 aaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaattt 815 | ||||| || ||| | | || || ||||| || || || || | ||||| || || | Sbjct: 24254701 agagcaacgacgaaatagacatctccgacatcccggggggacctgcagcattcgagatct 24254642 Query: 816 gtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgctc 875 |||||||||| ||||| |||||||| || || ||||| || ||||| || || || || | Sbjct: 24254641 gtgccaagttctgctatggcatgatcgtcaccctcaacgcgtacaacgtcctcgcagccc 24254582 Query: 876 gttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctaca 935 | |||||||| ||||| || || ||||| ||||| || ||||| || || || ||||||| Sbjct: 24254581 gctgcgcagccgagtatcttgagatgttcgagacgatcgacaaggggaacctcatctaca 24254522 Query: 936 aaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcgatcatagttc 995 | || || |||||| || | || ||||| || | |||||||| ||||| ||||| |||| Sbjct: 24254521 agatcgatgtgttcctgtcctcaagcatattcagaacctggaaggactccatcatcgttc 24254462 Query: 996 tgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatcaaccactgca 1055 | || | || ||||| ||||||||||||| ||||| | ||||| |||||||||||| Sbjct: 24254461 ttcagacaaccaagtcactgctgccatggtcggagaacctcaaggtgatcaaccactgcg 24254402 Query: 1056 ttgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtggtcatacacct 1115 | ||||| || || ||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 24254401 tcgattcgatcgcgacgaaggcctccatcgatccgtcagaggttgagtggtcatacacct 24254342 Query: 1116 acaacag 1122 ||||||| Sbjct: 24254341 acaacag 24254335 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Minus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 ||||||||| |||||||| |||||||| || ||| || |||||||||||||||||| || Sbjct: 24252624 gaagatactgagcaagctgtggtctggcaaggcgagcagcggcgagaacagcagctccga 24252565 Query: 2386 cacgtcggagagccccgg 2403 |||||||||||||||||| Sbjct: 24252564 cacgtcggagagccccgg 24252547 Score = 73.8 bits (37), Expect = 3e-09 Identities = 91/109 (83%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 |||||||||||||||||||||| | |||||| |||||||||| |||||||| || || | Sbjct: 24253033 tgatggactgcaagaagctgtcgccggaggcgagcatgcacgccgtgcagaacgagcgcc 24252974 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggc 2037 | || || || || || ||||| || |||||||| ||||| |||||||| Sbjct: 24252973 tcccgctccgcgtcgtcgtgcaggtcctcttcttcgagcaggtccgggc 24252925 Score = 56.0 bits (28), Expect = 7e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 24257188 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 24257129 Query: 626 aggt 629 |||| Sbjct: 24257128 aggt 24257125 Score = 52.0 bits (26), Expect = 0.011 Identities = 62/74 (83%) Strand = Plus / Minus Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||| ||||| ||| ||||||| |||||||| ||| |||| || || |||| Sbjct: 24255307 tcaggtttgtcgcaactgagttggcaacggacatcgtaatcattgtaggggaagtgaagt 24255248 Query: 684 tttatcttcacaag 697 |||||||||||||| Sbjct: 24255247 tttatcttcacaag 24255234 Score = 44.1 bits (22), Expect = 2.7 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1842 tgcatgacggactataccatgccatcgacatgtatctaaagg 1883 |||| ||||| ||||||| ||||||||||||||||| |||| Sbjct: 24253600 tgcacgacgggctataccgcgccatcgacatgtatctcaagg 24253559
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 157 bits (79), Expect = 3e-34 Identities = 340/427 (79%) Strand = Plus / Minus Query: 696 agttccctcttttgtcaaagagttcacgattgcaaagattggtagcttcaagtaacgagg 755 |||||||||||||||| |||||||| |||||||||| |||||| || || | ||||| | Sbjct: 31535 agttccctcttttgtcgaagagttcgcgattgcaaacattggtggcatcgacaaacgaag 31476 Query: 756 aaagcaatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaattt 815 | ||||| || ||| | | || || ||||| || || || || | ||||| || || | Sbjct: 31475 agagcaacgacgaaatagacatctccgacatcccggggggacctgcagcattcgagatct 31416 Query: 816 gtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgctc 875 |||||||||| ||||| |||||||| || || ||||| || ||||| || || || || | Sbjct: 31415 gtgccaagttctgctatggcatgatcgtcaccctcaacgcgtacaacgtcctcgcagccc 31356 Query: 876 gttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctaca 935 | |||||||| ||||| || || ||||| ||||| || ||||| || || || ||||||| Sbjct: 31355 gctgcgcagccgagtatcttgagatgttcgagacgatcgacaaggggaacctcatctaca 31296 Query: 936 aaattgacgtgttcttgacatcgagcatttttcgcacctggaaagactcgatcatagttc 995 | || || |||||| || | || ||||| || | |||||||| ||||| ||||| |||| Sbjct: 31295 agatcgatgtgttcctgtcctcaagcatattcagaacctggaaggactccatcatcgttc 31236 Query: 996 tgcaaagtacaaagtcgttgctgccatggtctgagaatttgaaggtaatcaaccactgca 1055 | || | || ||||| ||||||||||||| ||||| | ||||| |||||||||||| Sbjct: 31235 ttcagacaaccaagtcactgctgccatggtcggagaacctcaaggtgatcaaccactgcg 31176 Query: 1056 ttgattctattgcatcgaaggcgtcaattgatccgtcagaggttgagtggtcatacacct 1115 | ||||| || || ||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 31175 tcgattcgatcgcgacgaaggcctccatcgatccgtcagaggttgagtggtcatacacct 31116 Query: 1116 acaacag 1122 ||||||| Sbjct: 31115 acaacag 31109 Score = 91.7 bits (46), Expect = 1e-14 Identities = 70/78 (89%) Strand = Plus / Minus Query: 2326 gaagatactaagcaagctctggtctgggaaaacgaacatcggcgagaacagcagctcgga 2385 ||||||||| |||||||| |||||||| || ||| || |||||||||||||||||| || Sbjct: 29398 gaagatactgagcaagctgtggtctggcaaggcgagcagcggcgagaacagcagctccga 29339 Query: 2386 cacgtcggagagccccgg 2403 |||||||||||||||||| Sbjct: 29338 cacgtcggagagccccgg 29321 Score = 73.8 bits (37), Expect = 3e-09 Identities = 91/109 (83%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 |||||||||||||||||||||| | |||||| |||||||||| |||||||| || || | Sbjct: 29807 tgatggactgcaagaagctgtcgccggaggcgagcatgcacgccgtgcagaacgagcgcc 29748 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttctttgagcaagtccgggc 2037 | || || || || || ||||| || |||||||| ||||| |||||||| Sbjct: 29747 tcccgctccgcgtcgtcgtgcaggtcctcttcttcgagcaggtccgggc 29699 Score = 56.0 bits (28), Expect = 7e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 33962 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 33903 Query: 626 aggt 629 |||| Sbjct: 33902 aggt 33899 Score = 52.0 bits (26), Expect = 0.011 Identities = 62/74 (83%) Strand = Plus / Minus Query: 624 tcaggtttgttgcaacagagctggcaacagacatcgttatctccataggagatgtcaagt 683 |||||||||| ||||| ||| ||||||| |||||||| ||| |||| || || |||| Sbjct: 32081 tcaggtttgtcgcaactgagttggcaacggacatcgtaatcattgtaggggaagtgaagt 32022 Query: 684 tttatcttcacaag 697 |||||||||||||| Sbjct: 32021 tttatcttcacaag 32008 Score = 44.1 bits (22), Expect = 2.7 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1842 tgcatgacggactataccatgccatcgacatgtatctaaagg 1883 |||| ||||| ||||||| ||||||||||||||||| |||| Sbjct: 30374 tgcacgacgggctataccgcgccatcgacatgtatctcaagg 30333
>gb|AY105323.1| Zea mays PCO139382 mRNA sequence Length = 1178 Score = 87.7 bits (44), Expect = 2e-13 Identities = 107/128 (83%) Strand = Plus / Plus Query: 815 tgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgttcttgctgct 874 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 872 tgtgccaagttttgctacggcatgattgtcacactcaatgcctacaatgtgattgcagcc 931 Query: 875 cgttgcgcagctgagtacctagaaatgtttgagaccattgacaaaggaaatcttatctac 934 || || || || |||||| | || ||| |||||| ||||||| || ||||| |||||| Sbjct: 932 cgctgtgctgcagagtacttggagatgaatgagactgttgacaagggcaatctgatctac 991 Query: 935 aaaattga 942 || ||||| Sbjct: 992 aagattga 999
>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE Length = 119528 Score = 81.8 bits (41), Expect = 1e-11 Identities = 86/101 (85%) Strand = Plus / Minus Query: 1928 ttgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacgg 1987 ||||||||||||| ||||||||| || || |||||||| || ||||||||||| || Sbjct: 76258 ttgatggactgcaggaagctgtctgcagaagcttgcatgcatgcagtgcagaatgagcga 76199 Query: 1988 cttcctctgcgtgtggttgtgcaagttctcttctttgagca 2028 |||||| | ||||| ||||| |||||||||||||||||||| Sbjct: 76198 cttcctttacgtgtcgttgtacaagttctcttctttgagca 76158 Score = 65.9 bits (33), Expect = 7e-07 Identities = 129/161 (80%) Strand = Plus / Minus Query: 782 gacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggcatgatt 841 ||||||||||| || || ||| |||||||| ||||| ||||| || || || ||| || Sbjct: 77488 gacattcctgggggacctgttgcttttgaaatatgtgcaaagttctgttatggtatggtt 77429 Query: 842 gtaacactcaatgcatacaatgttcttgctgctcgttgcgcagctgagtacctagaaatg 901 || || || |||||||||||||| |||| ||||| || ||||| ||||| || || ||| Sbjct: 77428 gtcactctaaatgcatacaatgtagttgcagctcgctgtgcagcggagtatcttgagatg 77369 Query: 902 tttgagaccattgacaaaggaaatcttatctacaaaattga 942 | || |||||||| || |||||||| |||||||| ||||| Sbjct: 77368 tacgaaaccattgaaaagggaaatctcatctacaagattga 77328 Score = 48.1 bits (24), Expect = 0.17 Identities = 45/52 (86%) Strand = Plus / Minus Query: 1095 aggttgagtggtcatacacctacaacagaaaaaagctccaatctgagaatgg 1146 |||| |||||||||||||| || ||||| |||||||||| ||| || ||||| Sbjct: 77175 aggtggagtggtcatacacatataacaggaaaaagctcccatcggaaaatgg 77124
>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence Length = 145382 Score = 65.9 bits (33), Expect = 7e-07 Identities = 129/161 (80%) Strand = Plus / Minus Query: 782 gacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggcatgatt 841 ||||||||||| || || ||| |||||||| ||||| ||||| || || || ||| || Sbjct: 935 gacattcctgggggacctgttgcttttgaaatatgtgcaaagttctgttatggtatggtt 876 Query: 842 gtaacactcaatgcatacaatgttcttgctgctcgttgcgcagctgagtacctagaaatg 901 || || || |||||||||||||| |||| ||||| || ||||| ||||| || || ||| Sbjct: 875 gtcactctaaatgcatacaatgtagttgcagctcgctgtgcagcggagtatcttgagatg 816 Query: 902 tttgagaccattgacaaaggaaatcttatctacaaaattga 942 | || |||||||| || |||||||| |||||||| ||||| Sbjct: 815 tacgaaaccattgaaaagggaaatctcatctacaagattga 775 Score = 48.1 bits (24), Expect = 0.17 Identities = 45/52 (86%) Strand = Plus / Minus Query: 1095 aggttgagtggtcatacacctacaacagaaaaaagctccaatctgagaatgg 1146 |||| |||||||||||||| || ||||| |||||||||| ||| || ||||| Sbjct: 622 aggtggagtggtcatacacatataacaggaaaaagctcccatcggaaaatgg 571
>dbj|AP006661.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10F06, TM0347a, complete sequence Length = 24028 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 1961 tgcatgcacgcggtgcagaatgaacggcttcctctgcgtgtggttgtgcaagttctcttc 2020 |||||||| || |||||||| ||||||||||| |||| || || ||||| ||||||||| Sbjct: 16551 tgcatgcatgctgtgcagaacgaacggcttccaatgcgcgtcgtcgtgcaggttctcttc 16492 Query: 2021 tttga 2025 ||||| Sbjct: 16491 tttga 16487 Score = 44.1 bits (22), Expect = 2.7 Identities = 55/66 (83%) Strand = Plus / Minus Query: 760 caatgatgaagtgaatatatctgacattcctggtggtgcttctgcatttgaaatttgtgc 819 |||||||||||| |||| |||||||||||| || || |||| |||||||| ||||| Sbjct: 18336 caatgatgaagtccatatccatgacattcctggaggacctgctgcttttgaaatatgtgc 18277 Query: 820 caagtt 825 |||||| Sbjct: 18276 caagtt 18271
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 56.0 bits (28), Expect = 7e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaa 1980 ||||||||||| |||||||||| | ||||||||||| ||||||| |||||| Sbjct: 145872 tgatggactgccagaagctgtccctggaggcctgcacacacgcggcgcagaa 145923
>dbj|AK063508.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F08, full insert sequence Length = 2394 Score = 56.0 bits (28), Expect = 7e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 566 atgaagcatatgaagcttgggtcgaagccggatgtcttccagacagaaggcagcaatatc 625 |||||| ||||||||||||| || ||||| ||||| || |||||||| || | ||||||| Sbjct: 644 atgaagtatatgaagcttggatcaaagccagatgtgtttcagacagagggaaacaatatc 703 Query: 626 aggt 629 |||| Sbjct: 704 aggt 707
>gb|AY109948.1| Zea mays CL3417_1 mRNA sequence Length = 885 Score = 56.0 bits (28), Expect = 7e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaa 1980 ||||||||||| |||||||||| | ||||||||||| ||||||| |||||| Sbjct: 798 tgatggactgccagaagctgtccctggaggcctgcacacacgcggcgcagaa 747
>ref|NM_001055850.1| Oryza sativa (japonica cultivar-group) Os03g0205700 (Os03g0205700) mRNA, complete cds Length = 2518 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 359 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 417
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 43972 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 44030
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 97035 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 97093
>dbj|AK105404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E02, full insert sequence Length = 2518 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 359 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 417
>dbj|AK103674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136A15, full insert sequence Length = 2521 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaatgt 864 ||||| || |||||||||||||| || || |||||||| || |||||||| |||||||| Sbjct: 711 tttgagatctgtgccaagttttgttatggtatgattgtcacgctcaatgcctacaatgt 769 Score = 46.1 bits (23), Expect = 0.68 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1844 catgacggactataccatgccatcgacatgtatctaaaggaacaccc 1890 ||||| || ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1728 catgatgggctataccgcgccatcgacatgtatctgaaggagcaccc 1774
>dbj|AK230356.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-22-I02 Length = 2861 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 2225 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 2261
>ref|NM_119923.2| Arabidopsis thaliana protein binding / signal transducer (AT4G37590) mRNA, complete cds Length = 2485 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 1859 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 1895
>gb|AY081497.1| Arabidopsis thaliana putative protein (At4g37590) mRNA, complete cds Length = 1797 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 1355 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 1391
>gb|AY054668.1| Arabidopsis thaliana putative protein (At4g37590; F19F18.80) mRNA, complete cds Length = 2328 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 1858 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 1894
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 157239 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 157203
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 50.1 bits (25), Expect = 0.043 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcgg 1973 ||||||||||| |||||||||| | ||||||||||| ||||||| Sbjct: 194476 tgatggactgccagaagctgtccctggaggcctgcacacacgcgg 194520
>emb|BX828034.1|CNS0A3XF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1558 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 974 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 1010
>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone F19F18 (ESSA project) Length = 91740 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1995 tgcgtgtggttgtgcaagttctcttctttgagcaagt 2031 |||||||||| |||||||| ||||||||||| ||||| Sbjct: 33817 tgcgtgtggtagtgcaagtgctcttctttgaacaagt 33781
>ref|NM_001053717.1| Oryza sativa (japonica cultivar-group) Os02g0568100 (Os02g0568100) mRNA, complete cds Length = 1801 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 695 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 636 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 635 tgccgctgcgggtggtggtgcaggtgctcttc 604
>ref|NM_001053716.1| Oryza sativa (japonica cultivar-group) Os02g0568200 (Os02g0568200) mRNA, complete cds Length = 2289 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 1715 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 1774 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 1775 tgccgctgcgggtggtggtgcaggtgctcttc 1806
>gb|AC174356.5| Medicago truncatula clone mth2-18j17, complete sequence Length = 81625 Score = 48.1 bits (24), Expect = 0.17 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2003 gttgtgcaagttctcttctttgagcaag 2030 ||||| |||||||||||||||||||||| Sbjct: 41702 gttgtccaagttctcttctttgagcaag 41729
>ref|NM_119332.3| Arabidopsis thaliana protein binding / signal transducer (AT4G31820) mRNA, complete cds Length = 2657 Score = 48.1 bits (24), Expect = 0.17 Identities = 48/56 (85%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaa 861 ||||| || ||||||||||||||||| || |||| ||| || |||||||| ||||| Sbjct: 1044 tttgagatctgtgccaagttttgctatgggatgactgttacgctcaatgcttacaa 1099
>gb|AY150514.1| Arabidopsis thaliana unknown protein (At4g31820) mRNA, complete cds Length = 1747 Score = 48.1 bits (24), Expect = 0.17 Identities = 48/56 (85%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaa 861 ||||| || ||||||||||||||||| || |||| ||| || |||||||| ||||| Sbjct: 241 tttgagatctgtgccaagttttgctatgggatgactgttacgctcaatgcttacaa 296 Score = 46.1 bits (23), Expect = 0.68 Identities = 35/39 (89%) Strand = Plus / Plus Query: 2000 gtggttgtgcaagttctcttctttgagcaagtccgggca 2038 ||||| ||||||||||||| ||||||||| |||||||| Sbjct: 1369 gtggtggtgcaagttctctactttgagcagctccgggca 1407
>gb|AY091021.1| Arabidopsis thaliana unknown protein (At4g31820) mRNA, complete cds Length = 2708 Score = 48.1 bits (24), Expect = 0.17 Identities = 48/56 (85%) Strand = Plus / Plus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaa 861 ||||| || ||||||||||||||||| || |||| ||| || |||||||| ||||| Sbjct: 1044 tttgagatctgtgccaagttttgctatgggatgactgttacgctcaatgcttacaa 1099
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 48.1 bits (24), Expect = 0.17 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1997 cgtgtggttgtgcaagttctcttctttgagca 2028 |||||||| ||||| ||||||||||||||||| Sbjct: 107510 cgtgtggtggtgcaggttctcttctttgagca 107541
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 48.1 bits (24), Expect = 0.17 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1997 cgtgtggttgtgcaagttctcttctttgagca 2028 |||||||| ||||| ||||||||||||||||| Sbjct: 10972 cgtgtggtggtgcaggttctcttctttgagca 11003
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.17 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1997 cgtgtggttgtgcaagttctcttctttgagca 2028 |||||||| ||||| ||||||||||||||||| Sbjct: 10090751 cgtgtggtggtgcaggttctcttctttgagca 10090782
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 21628307 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 21628248 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 21628247 tgccgctgcgggtggtggtgcaggtgctcttc 21628216
>dbj|AB186127.1| Oryza sativa (japonica cultivar-group) mRNA for NPH3, complete cds Length = 2885 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 2118 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 2177 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 2178 tgccgctgcgggtggtggtgcaggtgctcttc 2209
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 48.1 bits (24), Expect = 0.17 Identities = 48/56 (85%) Strand = Plus / Minus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaa 861 ||||| || ||||||||||||||||| || |||| ||| || |||||||| ||||| Sbjct: 158289 tttgagatctgtgccaagttttgctatgggatgactgttacgctcaatgcttacaa 158234
>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA project) Length = 111517 Score = 48.1 bits (24), Expect = 0.17 Identities = 48/56 (85%) Strand = Plus / Minus Query: 806 tttgaaatttgtgccaagttttgctacggcatgattgtaacactcaatgcatacaa 861 ||||| || ||||||||||||||||| || |||| ||| || |||||||| ||||| Sbjct: 18950 tttgagatctgtgccaagttttgctatgggatgactgttacgctcaatgcttacaa 18895
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 117257 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 117198 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 117197 tgccgctgcgggtggtggtgcaggtgctcttc 117166
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 9704 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 9645 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 9644 tgccgctgcgggtggtggtgcaggtgctcttc 9613
>dbj|AK107582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E05, full insert sequence Length = 1801 Score = 48.1 bits (24), Expect = 0.17 Identities = 75/92 (81%) Strand = Plus / Minus Query: 1929 tgatggactgcaagaagctgtcacaggaggcctgcatgcacgcggtgcagaatgaacggc 1988 ||||||||||| |||||||||| || || ||||||||||||| |||||| || ||| Sbjct: 695 tgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggc 636 Query: 1989 ttcctctgcgtgtggttgtgcaagttctcttc 2020 | || ||||| ||||| ||||| || |||||| Sbjct: 635 tgccgctgcgggtggtggtgcaggtgctcttc 604
>ref|NM_001063529.1| Oryza sativa (japonica cultivar-group) Os06g0184500 (Os06g0184500) mRNA, complete cds Length = 1935 Score = 46.1 bits (23), Expect = 0.68 Identities = 32/35 (91%) Strand = Plus / Plus Query: 575 atgaagcttgggtcgaagccggatgtcttccagac 609 |||||||||||||| |||||||| | ||||||||| Sbjct: 10 atgaagcttgggtccaagccggacgccttccagac 44
>ref|NM_127869.2| Arabidopsis thaliana protein binding / signal transducer (AT2G23050) mRNA, complete cds Length = 1766 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 1438 tgcgggtgattgtgcaagttctcttctttga 1468 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 354 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 413 Query: 836 at 837 || Sbjct: 414 at 415
>gb|AY102541.1| Arabidopsis thaliana hypothetical protein (At2g23050/F21P24.11) mRNA, complete cds Length = 1793 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 1438 tgcgggtgattgtgcaagttctcttctttga 1468 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 354 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 413 Query: 836 at 837 || Sbjct: 414 at 415
>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete sequence Length = 94038 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 43893 tgcgggtgattgtgcaagttctcttctttga 43923 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 42738 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 42797 Query: 836 at 837 || Sbjct: 42798 at 42799
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.68 Identities = 32/35 (91%) Strand = Plus / Minus Query: 575 atgaagcttgggtcgaagccggatgtcttccagac 609 |||||||||||||| |||||||| | ||||||||| Sbjct: 4243794 atgaagcttgggtccaagccggacgccttccagac 4243760
>emb|AL035398.19|HS796I17 Human DNA sequence from clone RP4-796I17 on chromosome 22q13.2-35.1, complete sequence Length = 83120 Score = 46.1 bits (23), Expect = 0.68 Identities = 35/39 (89%) Strand = Plus / Minus Query: 685 ttatcttcacaagttccctcttttgtcaaagagttcacg 723 |||| ||||||||| |||||||| |||||||||||||| Sbjct: 10962 ttattttcacaagtagcctcttttctcaaagagttcacg 10924
>gb|BT005613.1| Arabidopsis thaliana clone U50388 unknown protein (At2g23050) mRNA, complete cds Length = 1477 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 1310 tgcgggtgattgtgcaagttctcttctttga 1340 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 226 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 285 Query: 836 at 837 || Sbjct: 286 at 287
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 46.1 bits (23), Expect = 0.68 Identities = 32/35 (91%) Strand = Plus / Minus Query: 575 atgaagcttgggtcgaagccggatgtcttccagac 609 |||||||||||||| |||||||| | ||||||||| Sbjct: 89015 atgaagcttgggtccaagccggacgccttccagac 88981
>dbj|AK117486.1| Arabidopsis thaliana At2g23050 mRNA for unknown protein, complete cds, clone: RAFL17-11-E06 Length = 1709 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 1407 tgcgggtgattgtgcaagttctcttctttga 1437 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 323 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 382 Query: 836 at 837 || Sbjct: 383 at 384
>gb|AY954795.1| Arabidopsis thaliana hypothetical protein (At2g23050) mRNA, complete cds Length = 1446 Score = 46.1 bits (23), Expect = 0.68 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1995 tgcgtgtggttgtgcaagttctcttctttga 2025 |||| ||| |||||||||||||||||||||| Sbjct: 1310 tgcgggtgattgtgcaagttctcttctttga 1340 Score = 44.1 bits (22), Expect = 2.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 776 atatctgacattcctggtggtgcttctgcatttgaaatttgtgccaagttttgctacggc 835 ||||| || |||||||||||| || ||| ||||| ||||||| |||||| || |||||| Sbjct: 226 atatcagagattcctggtggttctgttgcttttgagatttgtgtcaagttctgttacggc 285 Query: 836 at 837 || Sbjct: 286 at 287
>ref|XM_842215.1| Trypanosoma brucei TREU927 hypothetical protein, conserved (Tb927_8.4780) mRNA, complete cds Length = 12456 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2270 aacaagaatggcgaagagaaaa 2291 |||||||||||||||||||||| Sbjct: 5529 aacaagaatggcgaagagaaaa 5550
>gb|AC159448.1| Trypanosoma brucei chromosome 8 clone RPCI93-4A8, complete sequence Length = 152185 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2270 aacaagaatggcgaagagaaaa 2291 |||||||||||||||||||||| Sbjct: 80221 aacaagaatggcgaagagaaaa 80200
>gb|AY520111.1| Dissostichus mawsoni isolate DmawB 16S ribosomal RNA gene, complete sequence; mitochondrial Length = 1692 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2096 cttcttcccagagagaatggca 2117 |||||||||||||||||||||| Sbjct: 1671 cttcttcccagagagaatggca 1692
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2692 tgtaattgttttttgttttccg 2713 |||||||||||||||||||||| Sbjct: 886245 tgtaattgttttttgttttccg 886224
>ref|XM_819702.1| Trypanosoma brucei TREU927 clone RPCI93-4A8 hypothetical protein (Tb927.8.4780) partial mRNA Length = 12456 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2270 aacaagaatggcgaagagaaaa 2291 |||||||||||||||||||||| Sbjct: 5529 aacaagaatggcgaagagaaaa 5550
>emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L9 on chromosome 22, complete sequence Length = 146438 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1869 acatgtatctaaaggaacaccccagc 1894 |||||||| ||||||||||||||||| Sbjct: 106590 acatgtatataaaggaacaccccagc 106615
>gb|AC000040.4| Homo sapiens Chromosome 22q13 Cosmid Clone p130c12, complete sequence Length = 38134 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1869 acatgtatctaaaggaacaccccagc 1894 |||||||| ||||||||||||||||| Sbjct: 4645 acatgtatataaaggaacaccccagc 4670
>gb|U20660.1|DVU20660 Drosophila virilis suppressor of sable homolog gene, complete cds Length = 8527 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2113 tggcaactcttatggcagctcc 2134 |||||||||||||||||||||| Sbjct: 4244 tggcaactcttatggcagctcc 4223 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 496,293,270 Number of extensions: 26860668 Number of successful extensions: 138883 Number of sequences better than 10.0: 65 Number of HSP's gapped: 138846 Number of HSP's successfully gapped: 144 Length of query: 2762 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2739 Effective length of database: 18,503,978,556 Effective search space: 50682397264884 Effective search space used: 50682397264884 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
