ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf47e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK107957:Os05g0145100 30 0.74
2AK070928:Os11g0166800 28 3.7
3AK066091:Os03g0200200 27 8.2

>AK107957:Os05g0145100 |
          Length = 180
 Score = 30.4 bits (67), Expect = 0.74
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 122 WWCWDVTLLAAADSAVRSL*GGAREMLHADEREAESGG 9
           WWCW         +  ++  GGAR    A E   +SGG
Sbjct: 125 WWCWAAEKAPVTAAKAKATDGGARRAPPAAEAVEDSGG 162



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>AK070928:Os11g0166800 |
          Length = 238

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 340 NTAHSETTSTSKPSRRDEEEGPSHL 266
           N  H  TTS+S P+R  +E+  SHL
Sbjct: 155 NNTHHSTTSSSAPARMVKEQKDSHL 179



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>AK066091:Os03g0200200 |
          Length = 215

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -3

Query: 326 RDDVDEQTKPERRRRR 279
           +DDV+E+TKP + RRR
Sbjct: 111 KDDVEEETKPAKPRRR 126


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 10,956,547
Number of extensions: 197692
Number of successful extensions: 841
Number of sequences better than 10.0: 3
Number of HSP's gapped: 841
Number of HSP's successfully gapped: 3
Length of query: 177
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 83
Effective length of database: 11,636,001
Effective search space: 965788083
Effective search space used: 965788083
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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