No.
Definition
Score (bits)
E Value
1 gb|AF031231.1|AF031231 Triticum aestivum S222 (S222) mRNA, compl...
2325
0.0
2 emb|CT831225.1| Oryza sativa (indica cultivar-group) cDNA clone:...
700
0.0
3 ref|NM_001053810.1| Oryza sativa (japonica cultivar-group) Os02g...
698
0.0
4 dbj|AK100542.1| Oryza sativa (japonica cultivar-group) cDNA clon...
698
0.0
5 dbj|AK100170.1| Oryza sativa (japonica cultivar-group) cDNA clon...
682
0.0
6 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
389
e-104
7 dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D...
389
e-104
8 ref|NM_001059595.1| Oryza sativa (japonica cultivar-group) Os04g...
291
7e-75
9 dbj|AK070339.1| Oryza sativa (japonica cultivar-group) cDNA clon...
291
7e-75
10 gb|AY111758.1| Zea mays CL9639_1 mRNA sequence
242
6e-60
11 gb|BT023994.1| Zea mays clone EL01N0408C01 mRNA sequence
186
3e-43
12 dbj|AK070336.1| Oryza sativa (japonica cultivar-group) cDNA clon...
176
3e-40
13 emb|CR855185.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
157
3e-34
14 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
155
1e-33
15 emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...
155
1e-33
16 dbj|AK062989.1| Oryza sativa (japonica cultivar-group) cDNA clon...
105
8e-19
17 ref|NM_001073263.1| Oryza sativa (japonica cultivar-group) Os12g...
96
8e-16
18 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
96
8e-16
19 dbj|AK119478.1| Oryza sativa (japonica cultivar-group) cDNA clon...
96
8e-16
20 emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa...
96
8e-16
21 ref|NM_001069454.1| Oryza sativa (japonica cultivar-group) Os09g...
74
3e-09
22 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
74
3e-09
23 dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D...
74
3e-09
24 emb|CT831172.1| Oryza sativa (indica cultivar-group) cDNA clone:...
66
7e-07
25 gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
66
7e-07
26 gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
66
7e-07
27 ref|NM_001068708.1| Oryza sativa (japonica cultivar-group) Os08g...
62
1e-05
28 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
62
1e-05
29 dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic D...
62
1e-05
30 dbj|AK065539.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-05
31 dbj|AK065218.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-05
32 emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,...
52
0.011
33 emb|CR855201.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
48
0.17
34 gb|AC137156.3| Mus musculus BAC clone RP23-118K10 from chromosom...
48
0.17
35 gb|AC163291.3| Mus musculus BAC clone RP23-263M4 from chromosome...
48
0.17
36 ref|XM_001225469.1| Chaetomium globosum CBS 148.51 hypothetical ...
46
0.66
37 gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ...
46
0.66
38 emb|CR936323.2| Medicago truncatula chromosome 5 clone mth2-155c...
46
0.66
39 gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome...
46
0.66
40 emb|AL691519.8| Mouse DNA sequence from clone RP23-346N8 on chro...
46
0.66
41 gb|AC183611.2| Pan troglodytes BAC clone CH251-193J21 from chrom...
44
2.6
42 ref|XM_965178.1| PREDICTED: Tribolium castaneum similar to CG219...
44
2.6
43 gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL ...
44
2.6
44 gb|BC017066.1| Homo sapiens proline-rich coiled-coil 1, mRNA (cD...
44
2.6
45 gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosom...
44
2.6
46 gb|AC113287.8| Mus musculus chromosome 3, clone RP23-412L13, com...
44
2.6
47 dbj|AK057437.1| Homo sapiens cDNA FLJ32875 fis, clone TESTI2004031
44
2.6
48 gb|AC151282.3| Mus musculus BAC clone RP23-461H1 from chromosome...
44
2.6
49 gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp...
44
2.6
50 emb|AL590966.10| Human DNA sequence from clone RP11-191N8 on chr...
44
2.6
51 gb|AC114625.11| Mus musculus chromosome 3, clone RP24-107N14, co...
44
2.6
52 emb|AJ515158.1|HSA515158 Homo sapiens mRNA for hypothetical prot...
44
2.6
53 emb|AJ441110.3|HSA441110 Homo sapiens mRNA for hypothetical prot...
44
2.6
54 ref|NM_130809.2| Homo sapiens proline-rich coiled-coil 1 (PRRC1)...
44
2.6
55 emb|AJ515428.1|HSA515428 Homo sapiens mRNA for hypothetical prot...
44
2.6
56 emb|AJ496322.1|HSA496322 Homo sapiens partial mRNA for hypotheti...
44
2.6
57 emb|AJ427339.1|HSA427339 Homo sapiens mRNA for hypothetical prot...
44
2.6
58 emb|AL832600.2|HSM803910 Homo sapiens mRNA; cDNA DKFZp451C1217 (...
44
2.6
59 emb|AL832056.1|HSM803363 Homo sapiens mRNA; cDNA DKFZp313P0510 (...
44
2.6
60 gb|AC152822.2| Mus musculus BAC clone RP24-319O19 from 6, comple...
44
2.6
61 gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, compl...
44
2.6
62 gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, compl...
44
2.6
63 emb|AL831963.1|HSM803269 Homo sapiens mRNA; cDNA DKFZp451D162 (f...
44
2.6
64 dbj|AK090486.1| Homo sapiens mRNA for FLJ00410 protein
44
2.6
>gb|AF031231.1 |AF031231 Triticum aestivum S222 (S222) mRNA, complete cds
Length = 1748
Score = 2325 bits (1173), Expect = 0.0
Identities = 1411/1489 (94%), Gaps = 1/1489 (0%)
Strand = Plus / Plus
Query: 904 gccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatcaagacttt 963
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatctacaaatcagacatatggctcaatgctgaaaaatctatcatccatcaagacttt 60
Query: 964 tgcttctggaatacttgtccccaaacactatatctggcctgttacggcagataattatct 1023
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttctggaatacttgttcccaaacactatatctggcctgttacggcagataattatct 120
Query: 1024 gcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatttatgctgc 1083
||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 121 gcaaccctctacttcagtcgtggatgatgctcataaggcaggcttagaaatttatgctgc 180
Query: 1084 tgattttgccaacgactttgcgctcagctacaactacagctatgatccgttagcagaata 1143
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgattttgccaacgactttgcactcagctacaactacagctatgatccgttagcagaata 240
Query: 1144 ccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgatttccctat 1203
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttcgcttcatcgacaatggtgccttctgtgttgatggtctcttgactgatttccctat 300
Query: 1204 cactccattagaggccatcggttgctttactaacctgaacaataccaaggcagatcatgg 1263
|||||| |||||||||||||| ||||| | |||||||||||| |||||||||||||||||
Sbjct: 301 cactccgttagaggccatcggctgcttcagtaacctgaacaacaccaaggcagatcatgg 360
Query: 1264 ggcacctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacct 1323
|||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 361 ggcacctctagttatctcccacaatggtgctagtggtgactaccctgactgcactgacct 420
Query: 1324 agcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgac 1383
||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 421 agcttatcaaaaggcagttgttgatggtgcagatgtcattgactgtgacgttcaagtgac 480
Query: 1384 aaaagatggcataccaatatgcatgagttccattgacctaatggatgtcactactgtcgc 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 aaaagatggcataccaatatgcatgagttccattgacctaatggatgtcactactgttgc 540
Query: 1444 atcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctgttgctggagt 1503
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 541 atcctcacaatttgcttctcaagcgggtgtcataagtgacattaaggctgttgctggagt 600
Query: 1504 ctataccttcaacctcacttgggaggatattgcaaacaacctgaagcctatgatatcaaa 1563
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 601 ctataccttcaacctcacttgggaggacattgccaacaacctgaagcctatgatatcaaa 660
Query: 1564 cccatttggcaagtctaccctatcaagaaatcccagaagcaggaacgcaggaaaattcat 1623
|||||||||| || || |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 661 cccatttggccagattagcctatcaagaaatcccagaaacaggaacgccggaaaattcat 720
Query: 1624 gagattatcagacttcttggcttttgcaaaaggagaagatttgtcaggaatcatgattac 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagattatcagacttcttggcttttgcaaaaggagaagatttgtcaggaatcatgattac 780
Query: 1684 cgtggagcatgcttcattcatggcagagaaacttgggtttggtgtggtagatgcagtgat 1743
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtggagcatgcttcattcatggcagagaaacttgggtttggtgtggtagatgcagtgat 840
Query: 1744 caaagctgtcgatgactccggttacagcaaacagactgcccagaaagtgatgatccagtc 1803
||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 841 caaagctgtcgatgattccggttacagcaaacagaccgccaagaaagtgatgatccagtc 900
Query: 1804 aacaaacagctcaactctagtgaagttcaagcagctggccaagtataaccttgtgtacaa 1863
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aacaaacagctcaactctggtgaagttcaagcagctggccaagtataaccttgtgtacaa 960
Query: 1864 gatcgacgaagaagtgaaagacgccgcgccttcgtcccttgcagatatcaagaagtttgc 1923
||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 961 gatcgacgaagtcgtgaaagacgccgcgccttcctccctcgcagacatcaaaaagtttgc 1020
Query: 1924 ggatgccgtttctgtcagcatcaagtctgtttacccagagacgagcaatttcttgacaaa 1983
|||||| ||||||||||||| |||||| |||||||||||| ||||||||||| ||| |||
Sbjct: 1021 ggatgctgtttctgtcagcaccaagtccgtttacccagagtcgagcaatttcctgataaa 1080
Query: 1984 ccagacgaatcctcttgtcaagtccctgcagtctgctggccttccagtctatgtctatct 2043
||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1081 ccagacgaaccctctcgtcaagtccctgcagtctgctggtcttccagtctatgtgtatct 1140
Query: 2044 gctgatgaacgagttcctttctcagccgtatgacttcttctcagatgccacggcacagat 2103
||||| |||||||||| ||||||| ||||| |||||||||||||| |||||| |||||||
Sbjct: 1141 gctgaggaacgagttcttttctcaaccgtacgacttcttctcagacgccacgtcacagat 1200
Query: 2104 taatgcccttgtgcacaaaggtgtagagggagggggagtggatggactcatcaccgattt 2163
|| ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct: 1201 caacgcccttgtgcacaaagggggagagggaggcggagtggatggactcatcaccgattt 1260
Query: 2164 ccccgggacggcccatagatacaaactgaactcgtgcaggaagatgggggacaagacgcc 2223
|||||||||||| || ||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 1261 ccccgggacggctcacagatacaaattgaactcgtgcaggaacat-ggggacaagacgcc 1319
Query: 2224 ctactacatgctgcctccccagcgcggcggcctccttggggtcataccggataaagcagc 2283
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1320 ctactacatgctgcctccccagcgcggcggcctccttggggtcatacaggataaagcagc 1379
Query: 2284 attgccaccagcaatggccccaatgccggtgttgacggactcggacgtggcggagccgcc 2343
|||||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||
Sbjct: 1380 attgccaccagcaatggccccagagccggtgttgactgtctccgacgtggcggagccgcc 1439
Query: 2344 ccttcctcctgtgagcaacaccacaggtccggcgccctcccacgccgcc 2392
|||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 1440 ccttcctcctgtgagcaacaccacagctccagcgccctcccacgccgcc 1488
Score = 81.8 bits (41), Expect = 1e-11
Identities = 84/97 (86%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 2485 ttctatgtagcgagcgattcatttttccttttggtttggctgtacaagtatttgggggtg 2544
|||||||||||||||||||| |||||||||||| ||||| | | |||||||| ||
Sbjct: 1595 ttctatgtagcgagcgattcgtttttccttttgctttgggtctc-----atttgggg-tg 1648
Query: 2545 gtggacgttgaggttgaatgatgattcatgcctggat 2581
||||| ||||||||| |||||||||||||||||||||
Sbjct: 1649 gtggatgttgaggttaaatgatgattcatgcctggat 1685
Score = 58.0 bits (29), Expect = 2e-04
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 2424 tgctggtgctatgcgcttctctgcttatctgag 2456
|||| ||||||||||||||||||||||||||||
Sbjct: 1526 tgctagtgctatgcgcttctctgcttatctgag 1558
>emb|CT831225.1 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA230P04, full
insert sequence
Length = 2788
Score = 700 bits (353), Expect = 0.0
Identities = 729/853 (85%), Gaps = 1/853 (0%)
Strand = Plus / Plus
Query: 716 aatgttcagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctg 775
||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 769 aatgtgcagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctg 828
Query: 776 tctatgtcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaa 835
||| | ||||| ||||| | || ||||||||||||||| |||||||||| |||||| |
Sbjct: 829 tctgtttcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttacc 888
Query: 836 agtctacttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggc 895
||| || ||||||||| || |||||||||||||||||| || ||||| ||||| |
Sbjct: 889 agtttatcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactc 948
Query: 896 cttgtcgagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatc 955
||| |||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 949 gctgttgagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatc 1008
Query: 956 aagacttttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagat 1015
||||||||||| ||||||||||||||||| || |||||||||||||||| || |||
Sbjct: 1009 aagacttttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagac 1068
Query: 1016 aattatctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatt 1075
||||||||||| ||| ||| || ||||| | |||||||||||| || | ||||| ||
Sbjct: 1069 aattatctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtt 1128
Query: 1076 tatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgtta 1135
||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| |||
Sbjct: 1129 tatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccatta 1188
Query: 1136 gcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgat 1195
||||||| ||| |||||| |||||||| ||||||| |||||||||| | |||||||||
Sbjct: 1189 acagaatatcttaacttcattgataatggtgccttctctgttgatggtgtattgactgat 1248
Query: 1196 ttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaaggca 1255
|||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| ||
Sbjct: 1249 ttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaagaca 1308
Query: 1256 gatcatgg-ggcacctctagttatctcccacaatggtgctagtggcgaccatcctgactg 1314
|| |||| | |||||| | ||||||||||||||||||||||| ||| | || || ||
Sbjct: 1309 gacaatggcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagattg 1368
Query: 1315 cactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgt 1374
|||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | ||
Sbjct: 1369 cactgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccgt 1428
Query: 1375 tcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtcac 1434
||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1429 acaagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtcac 1488
Query: 1435 tactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctgt 1494
|||||| || | |||||||||||||||||| || ||||||||| || || ||| ||
Sbjct: 1489 tactgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatgg 1548
Query: 1495 tgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagcctat 1554
||||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 1549 tgctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagcccaa 1608
Query: 1555 gatatcaaaccca 1567
|||||||||||||
Sbjct: 1609 gatatcaaaccca 1621
Score = 276 bits (139), Expect = 4e-70
Identities = 421/515 (81%)
Strand = Plus / Plus
Query: 1589 agaaatcccagaagcaggaacgcaggaaaattcatgagattatcagacttcttggctttt 1648
|||||||| |||| || ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 1643 agaaatcctagaaacaagaatgcaggaagtttcatgagactatcggacttcttggccttt 1702
Query: 1649 gcaaaaggagaagatttgtcaggaatcatgattaccgtggagcatgcttcattcatggca 1708
||||||||| | || ||||||||| ||||||| | | ||||||||| |||||||||||
Sbjct: 1703 gcaaaaggaaaggagttgtcaggagtcatgatcagtatagagcatgctgcattcatggca 1762
Query: 1709 gagaaacttgggtttggtgtggtagatgcagtgatcaaagctgtcgatgactccggttac 1768
|| |||||||| |||||||| |||||||| ||||||||||| | ||||||||||| ||
Sbjct: 1763 gaaaaacttggatttggtgtagtagatgcggtgatcaaagcccttgatgactccggctat 1822
Query: 1769 agcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactctagtgaag 1828
||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||
Sbjct: 1823 agcaaacagactgcccagaaagtcatgattcagtcaaccaacagctcagtactagtgaag 1882
Query: 1829 ttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaagacgcc 1888
|||||| ||| ||||||| |||||||| |||| | | || || || || | ||| ||
Sbjct: 1883 ttcaaggagcaaaccaagtacaaccttgtttacatgcttgaggaggatgtcagagatgct 1942
Query: 1889 gcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttctgtcagcatcaag 1948
|| ||||| |||||||||||||||||||||||||| |||| ||||| ||| ||| | |
Sbjct: 1943 gcaccttcctcccttgcagatatcaagaagtttgctaatgctgtttcagtccgcacaacg 2002
Query: 1949 tctgtttacccagagacgagcaatttcttgacaaaccagacgaatcctcttgtcaagtcc 2008
|| ||||||| |||| | ||| |||| ||||||||| | || | | ||| || ||
Sbjct: 2003 tccatttacccggagagcaaacattatttgataaaccagaccagtcatatcgtccagacc 2062
Query: 2009 ctgcagtctgctggccttccagtctatgtctatctgctgatgaacgagttcctttctcag 2068
|||||||| ||||||||||| || ||||| || |||| ||||||||||| |||| ||
Sbjct: 2063 ctgcagtccgctggccttcccgtttatgtttacgtgctcatgaacgagtttgtttcgcaa 2122
Query: 2069 ccgtatgacttcttctcagatgccacggcacagat 2103
||| ||||||||||| |||| ||||| |||||||
Sbjct: 2123 ccgaatgacttcttcgcagacgccacaacacagat 2157
Score = 97.6 bits (49), Expect = 2e-16
Identities = 139/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||| ||||| | ||||||||||||||
Sbjct: 468 ggatacagccctgtggtgtgatgttcaattaaccagggatggtgcaggcatctgccttcc 527
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 528 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 587
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 588 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 636
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 2335 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 2385
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 262 atggggaggggcagccatggctgctccgttcttgggtc 299
Score = 52.0 bits (26), Expect = 0.011
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2421 tgctgctggtgctatgcgcttctctg 2446
||||||||||||||||||||||||||
Sbjct: 2478 tgctgctggtgctatgcgcttctctg 2503
>ref|NM_001053810.1 | Oryza sativa (japonica cultivar-group) Os02g0588500 (Os02g0588500)
mRNA, complete cds
Length = 2823
Score = 698 bits (352), Expect = 0.0
Identities = 727/852 (85%)
Strand = Plus / Plus
Query: 716 aatgttcagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctg 775
||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 776 aatgtgcagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctg 835
Query: 776 tctatgtcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaa 835
||| | ||||| ||||| | || ||||||||||||||| |||||||||| |||||| |
Sbjct: 836 tctgtttcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttacc 895
Query: 836 agtctacttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggc 895
||| || ||||||||| || |||||||||||||||||| || ||||| ||||| |
Sbjct: 896 agtttatcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactc 955
Query: 896 cttgtcgagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatc 955
||| |||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 956 gctgttgagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatc 1015
Query: 956 aagacttttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagat 1015
||||||||||| ||||||||||||||||| || |||||||||||||||| || |||
Sbjct: 1016 aagacttttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagac 1075
Query: 1016 aattatctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatt 1075
||||||||||| ||| ||| || ||||| | |||||||||||| || | ||||| ||
Sbjct: 1076 aattatctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtt 1135
Query: 1076 tatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgtta 1135
||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| |||
Sbjct: 1136 tatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccatta 1195
Query: 1136 gcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgat 1195
||||||| ||| |||||| |||||||| ||||||| |||||| ||| | |||||||||
Sbjct: 1196 acagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactgat 1255
Query: 1196 ttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaaggca 1255
|||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| ||
Sbjct: 1256 ttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaagaca 1315
Query: 1256 gatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgactgc 1315
|| ||| | |||||| | ||||||||||||||||||||||| ||| | || || |||
Sbjct: 1316 gacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagattgc 1375
Query: 1316 actgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgtt 1375
||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | ||
Sbjct: 1376 actgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccgta 1435
Query: 1376 caagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtcact 1435
||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1436 caagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtcact 1495
Query: 1436 actgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctgtt 1495
||||| || | |||||||||||||||||| || ||||||||| || || ||| || |
Sbjct: 1496 actgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatggt 1555
Query: 1496 gctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagcctatg 1555
|||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | |
Sbjct: 1556 gctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagcccaag 1615
Query: 1556 atatcaaaccca 1567
||||||||||||
Sbjct: 1616 atatcaaaccca 1627
Score = 276 bits (139), Expect = 4e-70
Identities = 421/515 (81%)
Strand = Plus / Plus
Query: 1589 agaaatcccagaagcaggaacgcaggaaaattcatgagattatcagacttcttggctttt 1648
|||||||| |||| || ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 1649 agaaatcctagaaacaagaatgcaggaagtttcatgagactatcggacttcttggccttt 1708
Query: 1649 gcaaaaggagaagatttgtcaggaatcatgattaccgtggagcatgcttcattcatggca 1708
||||||||| | || ||||||||| ||||||| | | ||||||||| |||||||||||
Sbjct: 1709 gcaaaaggaaaggagttgtcaggagtcatgatcagtatagagcatgctgcattcatggca 1768
Query: 1709 gagaaacttgggtttggtgtggtagatgcagtgatcaaagctgtcgatgactccggttac 1768
|| |||||||| |||||||| |||||||| ||||||||||| | ||||||||||| ||
Sbjct: 1769 gaaaaacttggatttggtgtagtagatgcggtgatcaaagcccttgatgactccggctat 1828
Query: 1769 agcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactctagtgaag 1828
||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||
Sbjct: 1829 agcaaacagactgcccagaaagtcatgattcagtcaaccaacagctcagtactagtgaag 1888
Query: 1829 ttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaagacgcc 1888
|||||| ||| ||||||| |||||||| |||| | | || || || || | ||| ||
Sbjct: 1889 ttcaaggagcaaaccaagtacaaccttgtttacatgcttgaggaggatgtcagagatgct 1948
Query: 1889 gcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttctgtcagcatcaag 1948
|| ||||| |||||||||||||||||||||||||| |||| ||||| ||| ||| | |
Sbjct: 1949 gcaccttcctcccttgcagatatcaagaagtttgctaatgctgtttcagtccgcacaacg 2008
Query: 1949 tctgtttacccagagacgagcaatttcttgacaaaccagacgaatcctcttgtcaagtcc 2008
|| ||||||| |||| | ||| |||| ||||||||| | || | | ||| || ||
Sbjct: 2009 tccatttacccggagagcaaacattatttgataaaccagaccagtcatatcgtccagacc 2068
Query: 2009 ctgcagtctgctggccttccagtctatgtctatctgctgatgaacgagttcctttctcag 2068
|||||||| ||||||||||| || ||||| || |||| ||||||||||| |||| ||
Sbjct: 2069 ctgcagtccgctggccttcccgtttatgtttacgtgctcatgaacgagtttgtttcgcaa 2128
Query: 2069 ccgtatgacttcttctcagatgccacggcacagat 2103
||| ||||||||||| |||| ||||| |||||||
Sbjct: 2129 ccgaatgacttcttcgcagacgccacaacacagat 2163
Score = 105 bits (53), Expect = 8e-19
Identities = 140/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||
Sbjct: 475 ggatacagccctgtggtgtgatgttcaattaaccaaggatggtgcaggcatctgccttcc 534
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 535 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 594
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 595 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 643
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 2341 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 2391
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 269 atggggaggggcagccatggctgctccgttcttgggtc 306
Score = 50.1 bits (25), Expect = 0.042
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2422 gctgctggtgctatgcgcttctctg 2446
|||||||||||||||||||||||||
Sbjct: 2485 gctgctggtgctatgcgcttctctg 2509
>dbj|AK100542.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023102L08, full
insert sequence
Length = 2782
Score = 698 bits (352), Expect = 0.0
Identities = 727/852 (85%)
Strand = Plus / Plus
Query: 716 aatgttcagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctg 775
||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 768 aatgtgcagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctg 827
Query: 776 tctatgtcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaa 835
||| | ||||| ||||| | || ||||||||||||||| |||||||||| |||||| |
Sbjct: 828 tctgtttcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttacc 887
Query: 836 agtctacttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggc 895
||| || ||||||||| || |||||||||||||||||| || ||||| ||||| |
Sbjct: 888 agtttatcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactc 947
Query: 896 cttgtcgagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatc 955
||| |||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 948 gctgttgagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatc 1007
Query: 956 aagacttttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagat 1015
||||||||||| ||||||||||||||||| || |||||||||||||||| || |||
Sbjct: 1008 aagacttttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagac 1067
Query: 1016 aattatctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatt 1075
||||||||||| ||| ||| || ||||| | |||||||||||| || | ||||| ||
Sbjct: 1068 aattatctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtt 1127
Query: 1076 tatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgtta 1135
||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| |||
Sbjct: 1128 tatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccatta 1187
Query: 1136 gcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgat 1195
||||||| ||| |||||| |||||||| ||||||| |||||| ||| | |||||||||
Sbjct: 1188 acagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactgat 1247
Query: 1196 ttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaaggca 1255
|||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| ||
Sbjct: 1248 ttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaagaca 1307
Query: 1256 gatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgactgc 1315
|| ||| | |||||| | ||||||||||||||||||||||| ||| | || || |||
Sbjct: 1308 gacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagattgc 1367
Query: 1316 actgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgtt 1375
||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | ||
Sbjct: 1368 actgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccgta 1427
Query: 1376 caagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtcact 1435
||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1428 caagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtcact 1487
Query: 1436 actgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctgtt 1495
||||| || | |||||||||||||||||| || ||||||||| || || ||| || |
Sbjct: 1488 actgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatggt 1547
Query: 1496 gctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagcctatg 1555
|||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | |
Sbjct: 1548 gctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagcccaag 1607
Query: 1556 atatcaaaccca 1567
||||||||||||
Sbjct: 1608 atatcaaaccca 1619
Score = 256 bits (129), Expect = 4e-64
Identities = 396/485 (81%)
Strand = Plus / Plus
Query: 1619 ttcatgagattatcagacttcttggcttttgcaaaaggagaagatttgtcaggaatcatg 1678
||||||||| |||| ||||||||||| |||||||||||| | || ||||||||| |||||
Sbjct: 1670 ttcatgagactatcggacttcttggcctttgcaaaaggaaaggagttgtcaggagtcatg 1729
Query: 1679 attaccgtggagcatgcttcattcatggcagagaaacttgggtttggtgtggtagatgca 1738
|| | | ||||||||| ||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1730 atcagtatagagcatgctgcattcatggcagaaaaacttggatttggtgtagtagatgcg 1789
Query: 1739 gtgatcaaagctgtcgatgactccggttacagcaaacagactgcccagaaagtgatgatc 1798
||||||||||| | ||||||||||| || |||||||||||||||||| |||| |||||
Sbjct: 1790 gtgatcaaagcccttgatgactccggctatagcaaacagactgcccaggaagtcatgatt 1849
Query: 1799 cagtcaacaaacagctcaactctagtgaagttcaagcagctggccaagtataaccttgtg 1858
|||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||||||
Sbjct: 1850 cagtcaaccaacagctcagtactagtgaagttcaaggagcaaaccaagtacaaccttgtt 1909
Query: 1859 tacaagatcgacgaagaagtgaaagacgccgcgccttcgtcccttgcagatatcaagaag 1918
|||| | | || || || || | ||| || || ||||| |||||||||||||||||||||
Sbjct: 1910 tacatgcttgaggaggatgtcagagatgctgcaccttcctcccttgcagatatcaagaag 1969
Query: 1919 tttgcggatgccgtttctgtcagcatcaagtctgtttacccagagacgagcaatttcttg 1978
||||| |||| ||||| ||| ||| | ||| ||||||| |||| | ||| |||
Sbjct: 1970 tttgctaatgctgtttcagtccgcacaacgtccatttacccggagagcaaacattatttg 2029
Query: 1979 acaaaccagacgaatcctcttgtcaagtccctgcagtctgctggccttccagtctatgtc 2038
| ||||||||| | || | | ||| || |||||||||| ||||||||||| || |||||
Sbjct: 2030 ataaaccagaccagtcatatcgtccagaccctgcagtccgctggccttcccgtttatgtt 2089
Query: 2039 tatctgctgatgaacgagttcctttctcagccgtatgacttcttctcagatgccacggca 2098
|| |||| ||||||||||| |||| || ||| ||||||||||| |||| ||||| ||
Sbjct: 2090 tacgtgctcatgaacgagtttgtttcgcaaccgaatgacttcttcgcagacgccacaaca 2149
Query: 2099 cagat 2103
|||||
Sbjct: 2150 cagat 2154
Score = 105 bits (53), Expect = 8e-19
Identities = 140/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||
Sbjct: 467 ggatacagccctgtggtgtgatgttcaattaaccaaggatggtgcaggcatctgccttcc 526
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 527 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 586
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 587 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 635
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 2332 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 2382
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 261 atggggaggggcagccatggctgctccgttcttgggtc 298
Score = 50.1 bits (25), Expect = 0.042
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2422 gctgctggtgctatgcgcttctctg 2446
|||||||||||||||||||||||||
Sbjct: 2476 gctgctggtgctatgcgcttctctg 2500
>dbj|AK100170.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023025E23, full
insert sequence
Length = 2824
Score = 682 bits (344), Expect = 0.0
Identities = 726/852 (85%), Gaps = 1/852 (0%)
Strand = Plus / Plus
Query: 716 aatgttcagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctg 775
||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 778 aatgtgcagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctg 837
Query: 776 tctatgtcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaa 835
||| | ||||| ||||| | || ||||||||||||||| |||||||||| |||||| |
Sbjct: 838 tctgtttcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttacc 897
Query: 836 agtctacttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggc 895
||| || ||||||||| || |||||||||||||||||| || ||||| ||||| |
Sbjct: 898 agtttatcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactc 957
Query: 896 cttgtcgagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatc 955
||| |||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 958 gctgttgagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatc 1017
Query: 956 aagacttttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagat 1015
||||||||||| ||||||||||||||||| || |||||||||||||||| || |||
Sbjct: 1018 aagacttttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagac 1077
Query: 1016 aattatctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatt 1075
||||||||||| ||| ||| || ||||| | |||||||||||| || | ||||| ||
Sbjct: 1078 aattatctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtt 1137
Query: 1076 tatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgtta 1135
||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| |||
Sbjct: 1138 tatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccatta 1197
Query: 1136 gcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgat 1195
||||||| ||| |||||| |||||||| ||||||| |||||| | | | |||||||||
Sbjct: 1198 acagaatatcttaacttcattgataatggtgccttctctgttgacg-tgtattgactgat 1256
Query: 1196 ttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaaggca 1255
|||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| ||
Sbjct: 1257 ttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaagaca 1316
Query: 1256 gatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgactgc 1315
|| ||| | |||||| | ||||||||||||||||||||||| ||| | || || |||
Sbjct: 1317 gacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagattgc 1376
Query: 1316 actgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgtt 1375
||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | ||
Sbjct: 1377 actgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccgta 1436
Query: 1376 caagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtcact 1435
||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1437 caagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtcact 1496
Query: 1436 actgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctgtt 1495
||||| || | |||||||||||||||||| || ||||||||| || || ||| || |
Sbjct: 1497 actgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatggt 1556
Query: 1496 gctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagcctatg 1555
|||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | |
Sbjct: 1557 gctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagcccaag 1616
Query: 1556 atatcaaaccca 1567
||||||||||||
Sbjct: 1617 atatcaaaccca 1628
Score = 276 bits (139), Expect = 4e-70
Identities = 421/515 (81%)
Strand = Plus / Plus
Query: 1589 agaaatcccagaagcaggaacgcaggaaaattcatgagattatcagacttcttggctttt 1648
|||||||| |||| || ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 1650 agaaatcctagaaacaagaatgcaggaagtttcatgagactatcggacttcttggccttt 1709
Query: 1649 gcaaaaggagaagatttgtcaggaatcatgattaccgtggagcatgcttcattcatggca 1708
||||||||| | || ||||||||| ||||||| | | ||||||||| |||||||||||
Sbjct: 1710 gcaaaaggaaaggagttgtcaggagtcatgatcagtatagagcatgctgcattcatggca 1769
Query: 1709 gagaaacttgggtttggtgtggtagatgcagtgatcaaagctgtcgatgactccggttac 1768
|| |||||||| |||||||| |||||||| ||||||||||| | ||||||||||| ||
Sbjct: 1770 gaaaaacttggatttggtgtagtagatgcggtgatcaaagcccttgatgactccggctat 1829
Query: 1769 agcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactctagtgaag 1828
||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||
Sbjct: 1830 agcaaacagactgcccagaaagtcatgattcagtcaaccaacagctcagtactagtgaag 1889
Query: 1829 ttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaagacgcc 1888
|||||| ||| ||||||| |||||||| |||| | | || || || || | ||| ||
Sbjct: 1890 ttcaaggagcaaaccaagtacaaccttgtttacatgcttgaggaggatgtcagagatgct 1949
Query: 1889 gcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttctgtcagcatcaag 1948
|| ||||| |||||||||||||||||||||||||| |||| ||||| ||| ||| | |
Sbjct: 1950 gcaccttcctcccttgcagatatcaagaagtttgctaatgctgtttcagtccgcacaacg 2009
Query: 1949 tctgtttacccagagacgagcaatttcttgacaaaccagacgaatcctcttgtcaagtcc 2008
|| ||||||| |||| | ||| |||| ||||||||| | || | | ||| || ||
Sbjct: 2010 tccatttacccggagagcaaacattatttgataaaccagaccagtcatatcgtccagacc 2069
Query: 2009 ctgcagtctgctggccttccagtctatgtctatctgctgatgaacgagttcctttctcag 2068
|||||||| ||||||||||| || ||||| || |||| ||||||||||| |||| ||
Sbjct: 2070 ctgcagtccgctggccttcccgtttatgtttacgtgctcatgaacgagtttgtttcgcaa 2129
Query: 2069 ccgtatgacttcttctcagatgccacggcacagat 2103
||| ||||||||||| |||| ||||| |||||||
Sbjct: 2130 ccgaatgacttcttcgcagacgccacaacacagat 2164
Score = 105 bits (53), Expect = 8e-19
Identities = 140/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||
Sbjct: 477 ggatacagccctgtggtgtgatgttcaattaaccaaggatggtgcaggcatctgccttcc 536
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 537 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 596
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 597 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 645
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 2342 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 2392
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 271 atggggaggggcagccatggctgctccgttcttgggtc 308
Score = 50.1 bits (25), Expect = 0.042
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2422 gctgctggtgctatgcgcttctctg 2446
|||||||||||||||||||||||||
Sbjct: 2486 gctgctggtgctatgcgcttctctg 2510
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 389 bits (196), Expect = e-104
Identities = 424/500 (84%)
Strand = Plus / Plus
Query: 722 cagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctgtctatg 781
|||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 22708501 cagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctgtctgtt 22708560
Query: 782 tcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaaagtcta 841
||||| ||||| | || ||||||||||||||| |||||||||| |||||| | ||| ||
Sbjct: 22708561 tcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttaccagttta 22708620
Query: 842 cttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggccttgtc 901
||||||||| || |||||||||||||||||| || ||||| ||||| | |||
Sbjct: 22708621 tcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactcgctgtt 22708680
Query: 902 gagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatcaagact 961
|||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||||
Sbjct: 22708681 gagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatcaagact 22708740
Query: 962 tttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagataattat 1021
||||| ||||||||||||||||| || |||||||||||||||| || ||| ||||||
Sbjct: 22708741 tttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagacaattat 22708800
Query: 1022 ctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatttatgct 1081
||||| ||| ||| || ||||| | |||||||||||| || | ||||| |||||||
Sbjct: 22708801 ctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtttatgcc 22708860
Query: 1082 gctgattttgccaacgactttgcgctcagctacaactacagctatgatccgttagcagaa 1141
||||||||||| || |||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 22708861 gctgattttgcaaatgactttttgctcagctacaactacagctatgatccattaacagaa 22708920
Query: 1142 taccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgatttccct 1201
|| ||| |||||| |||||||| ||||||| |||||| ||| | |||||||||||||||
Sbjct: 22708921 tatcttaacttcattgataatggtgccttctctgttgacggtgtattgactgatttccct 22708980
Query: 1202 atcactccattagaggccat 1221
|| || || | |||||||||
Sbjct: 22708981 attaccccttcagaggccat 22709000
Score = 289 bits (146), Expect = 3e-74
Identities = 242/274 (88%)
Strand = Plus / Plus
Query: 1277 atctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcagaag 1336
||||||||||||||||||||||| ||| | || || |||||||||||||||||||| |||
Sbjct: 22709242 atctcccacaatggtgctagtggtgactacccagattgcactgacctagcttatcaaaag 22709301
Query: 1337 gcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcata 1396
|||||| ||||||||||||||||||| |||||| | || ||||| || ||||||||||||
Sbjct: 22709302 gcagttactgatggtgcagatgtcatcgactgtcccgtacaagtaaccaaagatggcata 22709361
Query: 1397 ccaatatgcatgagttccattgacctaatggatgtcactactgtcgcatcctcacaattt 1456
|| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 22709362 cctatatgcatgagttccattgacctaatggatgtcactactgtttcaacgtcacaattt 22709421
Query: 1457 tcttctcaagcgggtgtcataaatgacattaaggctgttgctggagtctataccttcaac 1516
||||||||| || ||||||||| || || ||| || ||||||||||||| ||||||||
Sbjct: 22709422 tcttctcaaacgactgtcataaaagatatcaagaatggtgctggagtctattccttcaac 22709481
Query: 1517 ctcacttgggaggatattgcaaacaacctgaagc 1550
||||| ||||| |||||||| || ||||||||||
Sbjct: 22709482 ctcacatgggatgatattgcgaagaacctgaagc 22709515
Score = 220 bits (111), Expect = 2e-53
Identities = 339/415 (81%)
Strand = Plus / Plus
Query: 1689 agcatgcttcattcatggcagagaaacttgggtttggtgtggtagatgcagtgatcaaag 1748
|||||||| ||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 22710466 agcatgctgcattcatggcagaaaaacttggatttggtgtagtagatgcggtgatcaaag 22710525
Query: 1749 ctgtcgatgactccggttacagcaaacagactgcccagaaagtgatgatccagtcaacaa 1808
| | ||||||||||| || ||||||||||||||||||||||| ||||| |||||||| |
Sbjct: 22710526 cccttgatgactccggctatagcaaacagactgcccagaaagtcatgattcagtcaacca 22710585
Query: 1809 acagctcaactctagtgaagttcaagcagctggccaagtataaccttgtgtacaagatcg 1868
|||||||| ||||||||||||||| ||| ||||||| |||||||| |||| | | |
Sbjct: 22710586 acagctcagtactagtgaagttcaaggagcaaaccaagtacaaccttgtttacatgcttg 22710645
Query: 1869 acgaagaagtgaaagacgccgcgccttcgtcccttgcagatatcaagaagtttgcggatg 1928
| || || || | ||| || || ||||| |||||||||||||||||||||||||| |||
Sbjct: 22710646 aggaggatgtcagagatgctgcaccttcctcccttgcagatatcaagaagtttgctaatg 22710705
Query: 1929 ccgtttctgtcagcatcaagtctgtttacccagagacgagcaatttcttgacaaaccaga 1988
| ||||| ||| ||| | ||| ||||||| |||| | ||| |||| ||||||||
Sbjct: 22710706 ctgtttcagtccgcacaacgtccatttacccggagagcaaacattatttgataaaccaga 22710765
Query: 1989 cgaatcctcttgtcaagtccctgcagtctgctggccttccagtctatgtctatctgctga 2048
| | || | | ||| || |||||||||| ||||||||||| || ||||| || |||| |
Sbjct: 22710766 ccagtcatatcgtccagaccctgcagtccgctggccttcccgtttatgtttacgtgctca 22710825
Query: 2049 tgaacgagttcctttctcagccgtatgacttcttctcagatgccacggcacagat 2103
|||||||||| |||| || ||| ||||||||||| |||| ||||| |||||||
Sbjct: 22710826 tgaacgagtttgtttcgcaaccgaatgacttcttcgcagacgccacaacacagat 22710880
Score = 105 bits (53), Expect = 8e-19
Identities = 140/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||
Sbjct: 22707881 ggatacagccctgtggtgtgatgttcaattaaccaaggatggtgcaggcatctgccttcc 22707940
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 22707941 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 22708000
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 22708001 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 22708049
Score = 79.8 bits (40), Expect = 5e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 1589 agaaatcccagaagcaggaacgcaggaaaattcatgagattatcagacttcttggctttt 1648
|||||||| |||| || ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 22709804 agaaatcctagaaacaagaatgcaggaagtttcatgagactatcggacttcttggccttt 22709863
Query: 1649 gcaaaaggagaagatttgtcaggaatcatgat 1680
||||||||| | || ||||||||| |||||||
Sbjct: 22709864 gcaaaaggaaaggagttgtcaggagtcatgat 22709895
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 22711179 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 22711229
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 22706964 atggggaggggcagccatggctgctccgttcttgggtc 22707001
Score = 50.1 bits (25), Expect = 0.042
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2422 gctgctggtgctatgcgcttctctg 2446
|||||||||||||||||||||||||
Sbjct: 22711323 gctgctggtgctatgcgcttctctg 22711347
>dbj|AP005643.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0046O12
Length = 128223
Score = 389 bits (196), Expect = e-104
Identities = 424/500 (84%)
Strand = Plus / Plus
Query: 722 cagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctgtctatg 781
|||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 67297 cagcatgacagtttctatagccagtttaatctgagtatgagaagctatatcctgtctgtt 67356
Query: 782 tcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcctcaaaagtcta 841
||||| ||||| | || ||||||||||||||| |||||||||| |||||| | ||| ||
Sbjct: 67357 tcaaaacaatatattgctgactacatctcatcacctgaagtgaacttccttaccagttta 67416
Query: 842 cttggaagagttggcaggaagacaaagcttgtgttccgttttcttgatgaaggccttgtc 901
||||||||| || |||||||||||||||||| || ||||| ||||| | |||
Sbjct: 67417 tcaggaagagttaacaagaagacaaagcttgtgtttcggcttcttaatgaactcgctgtt 67476
Query: 902 gagccatcaacaaaccagacatatggctcaatgctgaaaaatctatcatccatcaagact 961
|||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||||
Sbjct: 67477 gagccatctacaaaccagacatatggctcaatgttgaaaaatctaacattcatcaagact 67536
Query: 962 tttgcttctggaatacttgtccccaaacactatatctggcctgttacggcagataattat 1021
||||| ||||||||||||||||| || |||||||||||||||| || ||| ||||||
Sbjct: 67537 tttgcatctggaatacttgtccctaagaactatatctggcctgtaacacaagacaattat 67596
Query: 1022 ctgcaaccctccacttcagtcgtggatgatgctcataaggccgacttagaaatttatgct 1081
||||| ||| ||| || ||||| | |||||||||||| || | ||||| |||||||
Sbjct: 67597 ctgcagcccagcacatcggtcgttggtgatgctcataaagcaggactagaagtttatgcc 67656
Query: 1082 gctgattttgccaacgactttgcgctcagctacaactacagctatgatccgttagcagaa 1141
||||||||||| || |||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 67657 gctgattttgcaaatgactttttgctcagctacaactacagctatgatccattaacagaa 67716
Query: 1142 taccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactgatttccct 1201
|| ||| |||||| |||||||| ||||||| |||||| ||| | |||||||||||||||
Sbjct: 67717 tatcttaacttcattgataatggtgccttctctgttgacggtgtattgactgatttccct 67776
Query: 1202 atcactccattagaggccat 1221
|| || || | |||||||||
Sbjct: 67777 attaccccttcagaggccat 67796
Score = 289 bits (146), Expect = 3e-74
Identities = 242/274 (88%)
Strand = Plus / Plus
Query: 1277 atctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcagaag 1336
||||||||||||||||||||||| ||| | || || |||||||||||||||||||| |||
Sbjct: 68038 atctcccacaatggtgctagtggtgactacccagattgcactgacctagcttatcaaaag 68097
Query: 1337 gcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcata 1396
|||||| ||||||||||||||||||| |||||| | || ||||| || ||||||||||||
Sbjct: 68098 gcagttactgatggtgcagatgtcatcgactgtcccgtacaagtaaccaaagatggcata 68157
Query: 1397 ccaatatgcatgagttccattgacctaatggatgtcactactgtcgcatcctcacaattt 1456
|| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 68158 cctatatgcatgagttccattgacctaatggatgtcactactgtttcaacgtcacaattt 68217
Query: 1457 tcttctcaagcgggtgtcataaatgacattaaggctgttgctggagtctataccttcaac 1516
||||||||| || ||||||||| || || ||| || ||||||||||||| ||||||||
Sbjct: 68218 tcttctcaaacgactgtcataaaagatatcaagaatggtgctggagtctattccttcaac 68277
Query: 1517 ctcacttgggaggatattgcaaacaacctgaagc 1550
||||| ||||| |||||||| || ||||||||||
Sbjct: 68278 ctcacatgggatgatattgcgaagaacctgaagc 68311
Score = 220 bits (111), Expect = 2e-53
Identities = 339/415 (81%)
Strand = Plus / Plus
Query: 1689 agcatgcttcattcatggcagagaaacttgggtttggtgtggtagatgcagtgatcaaag 1748
|||||||| ||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 69262 agcatgctgcattcatggcagaaaaacttggatttggtgtagtagatgcggtgatcaaag 69321
Query: 1749 ctgtcgatgactccggttacagcaaacagactgcccagaaagtgatgatccagtcaacaa 1808
| | ||||||||||| || ||||||||||||||||||||||| ||||| |||||||| |
Sbjct: 69322 cccttgatgactccggctatagcaaacagactgcccagaaagtcatgattcagtcaacca 69381
Query: 1809 acagctcaactctagtgaagttcaagcagctggccaagtataaccttgtgtacaagatcg 1868
|||||||| ||||||||||||||| ||| ||||||| |||||||| |||| | | |
Sbjct: 69382 acagctcagtactagtgaagttcaaggagcaaaccaagtacaaccttgtttacatgcttg 69441
Query: 1869 acgaagaagtgaaagacgccgcgccttcgtcccttgcagatatcaagaagtttgcggatg 1928
| || || || | ||| || || ||||| |||||||||||||||||||||||||| |||
Sbjct: 69442 aggaggatgtcagagatgctgcaccttcctcccttgcagatatcaagaagtttgctaatg 69501
Query: 1929 ccgtttctgtcagcatcaagtctgtttacccagagacgagcaatttcttgacaaaccaga 1988
| ||||| ||| ||| | ||| ||||||| |||| | ||| |||| ||||||||
Sbjct: 69502 ctgtttcagtccgcacaacgtccatttacccggagagcaaacattatttgataaaccaga 69561
Query: 1989 cgaatcctcttgtcaagtccctgcagtctgctggccttccagtctatgtctatctgctga 2048
| | || | | ||| || |||||||||| ||||||||||| || ||||| || |||| |
Sbjct: 69562 ccagtcatatcgtccagaccctgcagtccgctggccttcccgtttatgtttacgtgctca 69621
Query: 2049 tgaacgagttcctttctcagccgtatgacttcttctcagatgccacggcacagat 2103
|||||||||| |||| || ||| ||||||||||| |||| ||||| |||||||
Sbjct: 69622 tgaacgagtttgtttcgcaaccgaatgacttcttcgcagacgccacaacacagat 69676
Score = 105 bits (53), Expect = 8e-19
Identities = 140/169 (82%)
Strand = Plus / Plus
Query: 418 ggattcagccctgtggtgcgatgttcggttaaccaaggatgccgttggcatctgccttcc 477
|||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||
Sbjct: 66677 ggatacagccctgtggtgtgatgttcaattaaccaaggatggtgcaggcatctgccttcc 66736
Query: 478 agacataaaaatggataactgcacaaccatatccgatctttttccaaagggaaagaagac 537
|||||| ||||||||| ||||||| |||| | || ||| ||||||||| ||||||||
Sbjct: 66737 ggacatacgaatggataattgcacaaacatagctaatgtttatccaaaggggaagaagac 66796
Query: 538 ctaccgtgtaaacggtgtgtccacgaccgggtggttctctgtggactat 586
||| |||| || ||||| || ||| | |||||||| || |||||||||
Sbjct: 66797 ttacagtgtcaatggtgtatctacgcctgggtggttttccgtggactat 66845
Score = 79.8 bits (40), Expect = 5e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 1589 agaaatcccagaagcaggaacgcaggaaaattcatgagattatcagacttcttggctttt 1648
|||||||| |||| || ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 68600 agaaatcctagaaacaagaatgcaggaagtttcatgagactatcggacttcttggccttt 68659
Query: 1649 gcaaaaggagaagatttgtcaggaatcatgat 1680
||||||||| | || ||||||||| |||||||
Sbjct: 68660 gcaaaaggaaaggagttgtcaggagtcatgat 68691
Score = 54.0 bits (27), Expect = 0.003
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2287 gccaccagcaatggccccaatgccggtgttgacggactcggacgtggcgga 2337
||||||||||||||| |||||||| | ||||||||||| ||||| |||||
Sbjct: 69975 gccaccagcaatggcgccaatgcctctcttgacggactccgacgtcgcgga 70025
Score = 52.0 bits (26), Expect = 0.011
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 212 atggggaggagcggccatgcctgctccgttcttgggtc 249
||||||||| || |||||| ||||||||||||||||||
Sbjct: 65760 atggggaggggcagccatggctgctccgttcttgggtc 65797
Score = 50.1 bits (25), Expect = 0.042
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2422 gctgctggtgctatgcgcttctctg 2446
|||||||||||||||||||||||||
Sbjct: 70119 gctgctggtgctatgcgcttctctg 70143
>ref|NM_001059595.1 | Oryza sativa (japonica cultivar-group) Os04g0472300 (Os04g0472300)
mRNA, complete cds
Length = 2492
Score = 291 bits (147), Expect = 7e-75
Identities = 459/563 (81%)
Strand = Plus / Plus
Query: 868 gcttgtgttccgttttcttgatgaaggccttgtcgagccatcaacaaaccagacatatgg 927
|||||||||||||||||| ||||| || |||| ||||| || || |||||||||||
Sbjct: 771 gcttgtgttccgttttctcgatgagagcacaatcgaaccatctaccaaacagacatatgg 830
Query: 928 ctcaatgctgaaaaatctatcatccatcaagacttttgcttctggaatacttgtccccaa 987
|| ||| |||||||||| ||| ||||||| || || ||||| ||| ||||||| ||
Sbjct: 831 atccatgttgaaaaatcttacatttgtcaagacattcgcatctggtataattgtcccaaa 890
Query: 988 acactatatctggcctgttacggcagataattatctgcaaccctccacttcagtcgtgga 1047
| | ||||||||||||||| | |||||||||||||| |||| |||||||||||| ||
Sbjct: 891 aaaatatatctggcctgtttcaccagataattatctggaaccacacacttcagtcgtcga 950
Query: 1048 tgatgctcataaggccgacttagaaatttatgctgctgattttgccaacgactttgcgct 1107
|||||||||||| || | || |||||||||||||| || |||||||| |||||| | |
Sbjct: 951 tgatgctcataaagcagggttggaaatttatgctgccgactttgccaatgactttatgtt 1010
Query: 1108 cagctacaactacagctatgatccgttagcagaataccttcgcttcatcgataatggcgc 1167
||| |||||| | ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct: 1011 cagttacaaccatagctatgatccattagcagaatatctctcattcattgacaatggtgc 1070
Query: 1168 cttctgtgttgatggtctcttgactgatttccctatcactccattagaggccatcggttg 1227
|||| ||||||||| | ||||||||||| ||| | || || | ||| ||||| || ||
Sbjct: 1071 tttctctgttgatggagtattgactgattttcctgttacaccttcagaagccataggctg 1130
Query: 1228 ctttactaacctgaacaataccaaggcagatcatggggcacctctagttatctcccacaa 1287
||||||||| ||||| || | ||| |||||||||| |||||| |||| ||||||||
Sbjct: 1131 ctttactaatctgaagaaaagcaaaacagatcatggaaagcctctaattatttcccacaa 1190
Query: 1288 tggtgctagtggcgaccatcctgactgcactgacctagcttatcagaaggcagttgctga 1347
|||||||||||| || | || | ||||||||| ||||||||||| || ||||||| |||
Sbjct: 1191 tggtgctagtggggattacccagcctgcactgatctagcttatcaaaaagcagttgatga 1250
Query: 1348 tggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcataccaatatgcat 1407
|||||| ||||||||||| || |||| ||| |||| |||||||||||||||||||||||
Sbjct: 1251 tggtgccgatgtcattgattgccctgtccaattgaccaaagatggcataccaatatgcat 1310
Query: 1408 gagttccattgacctaatggatg 1430
|||||||||| || | |||||||
Sbjct: 1311 gagttccattaacttgatggatg 1333
Score = 125 bits (63), Expect = 9e-25
Identities = 222/275 (80%)
Strand = Plus / Plus
Query: 1661 gatttgtcaggaatcatgattaccgtggagcatgcttcattcatggcagagaaacttggg 1720
||||| |||||||| ||||| | ||||||||||||| | || |||| ||| ||||||||
Sbjct: 1564 gatttatcaggaattatgatcagcgtggagcatgctgcttttgtggcggaggaacttggg 1623
Query: 1721 tttggtgtggtagatgcagtgatcaaagctgtcgatgactccggttacagcaaacagact 1780
|||| ||||||| |||| ||||| | |||||| | ||||||||||| || |||
Sbjct: 1624 tttgacatggtagactcagttatcaagaccctcgatgctgctggttacagcaaccaaact 1683
Query: 1781 gcccagaaagtgatgatccagtcaacaaacagctcaactctagtgaagttcaagcagctg 1840
||||||||||| ||||| ||||||| |||||||| | | ||||||||||||||||
Sbjct: 1684 gcccagaaagttatgattcagtcaagcaacagctcggttttggtgaagttcaagcagcaa 1743
Query: 1841 gccaagtataaccttgtgtacaagatcgacgaagaagtgaaagacgccgcgccttcgtcc 1900
| ||||| |||||||||||| |||| |||| || || || |||||||||||||| |||
Sbjct: 1744 acgaagtacgaccttgtgtacatgatcaacgaggaggtcaaggacgccgcgccttcttcc 1803
Query: 1901 cttgcagatatcaagaagtttgcggatgccgtttc 1935
|| || | |||||||||||||| |||||||||||
Sbjct: 1804 ctcgctgccatcaagaagtttgccgatgccgtttc 1838
Score = 56.0 bits (28), Expect = 7e-04
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 796 tgttgactacatctcatcccctgaagtgagcttcct 831
||||||||| |||||||| |||||||||||||||||
Sbjct: 699 tgttgactatatctcatcacctgaagtgagcttcct 734
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 293 gcgcagaagggctcgacctggaagacgctgagtggcaatgctccaacagtcatagctaag 352
|||||||||| ||| | |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 184 gcgcagaaggcctcttcttggaagacgctgagcggcaatgctccggcaatcatagccaag 243
Query: 353 gg 354
||
Sbjct: 244 gg 245
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 437 gatgttcggttaaccaaggatgccgttggcatctgccttccagacataaaaatggataac 496
||||||||||| |||||||||| |||| |||||||| || |||||||| ||||| |||
Sbjct: 334 gatgttcggttgaccaaggatggtcttggtatctgcctgccggacataaagatggacaac 393
Query: 497 tg 498
||
Sbjct: 394 tg 395
Score = 48.1 bits (24), Expect = 0.17
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2316 tgacggactcggacgtggcggagccgcc 2343
|||||| |||||||||||||||||||||
Sbjct: 2201 tgacgggctcggacgtggcggagccgcc 2228
Score = 44.1 bits (22), Expect = 2.6
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2048 atgaacgagttcctttctcagccgtatgacttcttctc 2085
|||||||||||| ||||||||| || |||||||||||
Sbjct: 1948 atgaacgagttcgcttctcagccatacgacttcttctc 1985
>dbj|AK070339.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023048K03, full
insert sequence
Length = 2493
Score = 291 bits (147), Expect = 7e-75
Identities = 459/563 (81%)
Strand = Plus / Plus
Query: 868 gcttgtgttccgttttcttgatgaaggccttgtcgagccatcaacaaaccagacatatgg 927
|||||||||||||||||| ||||| || |||| ||||| || || |||||||||||
Sbjct: 772 gcttgtgttccgttttctcgatgagagcacaatcgaaccatctaccaaacagacatatgg 831
Query: 928 ctcaatgctgaaaaatctatcatccatcaagacttttgcttctggaatacttgtccccaa 987
|| ||| |||||||||| ||| ||||||| || || ||||| ||| ||||||| ||
Sbjct: 832 atccatgttgaaaaatcttacatttgtcaagacattcgcatctggtataattgtcccaaa 891
Query: 988 acactatatctggcctgttacggcagataattatctgcaaccctccacttcagtcgtgga 1047
| | ||||||||||||||| | |||||||||||||| |||| |||||||||||| ||
Sbjct: 892 aaaatatatctggcctgtttcaccagataattatctggaaccacacacttcagtcgtcga 951
Query: 1048 tgatgctcataaggccgacttagaaatttatgctgctgattttgccaacgactttgcgct 1107
|||||||||||| || | || |||||||||||||| || |||||||| |||||| | |
Sbjct: 952 tgatgctcataaagcagggttggaaatttatgctgccgactttgccaatgactttatgtt 1011
Query: 1108 cagctacaactacagctatgatccgttagcagaataccttcgcttcatcgataatggcgc 1167
||| |||||| | ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct: 1012 cagttacaaccatagctatgatccattagcagaatatctctcattcattgacaatggtgc 1071
Query: 1168 cttctgtgttgatggtctcttgactgatttccctatcactccattagaggccatcggttg 1227
|||| ||||||||| | ||||||||||| ||| | || || | ||| ||||| || ||
Sbjct: 1072 tttctctgttgatggagtattgactgattttcctgttacaccttcagaagccataggctg 1131
Query: 1228 ctttactaacctgaacaataccaaggcagatcatggggcacctctagttatctcccacaa 1287
||||||||| ||||| || | ||| |||||||||| |||||| |||| ||||||||
Sbjct: 1132 ctttactaatctgaagaaaagcaaaacagatcatggaaagcctctaattatttcccacaa 1191
Query: 1288 tggtgctagtggcgaccatcctgactgcactgacctagcttatcagaaggcagttgctga 1347
|||||||||||| || | || | ||||||||| ||||||||||| || ||||||| |||
Sbjct: 1192 tggtgctagtggggattacccagcctgcactgatctagcttatcaaaaagcagttgatga 1251
Query: 1348 tggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcataccaatatgcat 1407
|||||| ||||||||||| || |||| ||| |||| |||||||||||||||||||||||
Sbjct: 1252 tggtgccgatgtcattgattgccctgtccaattgaccaaagatggcataccaatatgcat 1311
Query: 1408 gagttccattgacctaatggatg 1430
|||||||||| || | |||||||
Sbjct: 1312 gagttccattaacttgatggatg 1334
Score = 125 bits (63), Expect = 9e-25
Identities = 222/275 (80%)
Strand = Plus / Plus
Query: 1661 gatttgtcaggaatcatgattaccgtggagcatgcttcattcatggcagagaaacttggg 1720
||||| |||||||| ||||| | ||||||||||||| | || |||| ||| ||||||||
Sbjct: 1565 gatttatcaggaattatgatcagcgtggagcatgctgcttttgtggcggaggaacttggg 1624
Query: 1721 tttggtgtggtagatgcagtgatcaaagctgtcgatgactccggttacagcaaacagact 1780
|||| ||||||| |||| ||||| | |||||| | ||||||||||| || |||
Sbjct: 1625 tttgacatggtagactcagttatcaagaccctcgatgctgctggttacagcaaccaaact 1684
Query: 1781 gcccagaaagtgatgatccagtcaacaaacagctcaactctagtgaagttcaagcagctg 1840
||||||||||| ||||| ||||||| |||||||| | | ||||||||||||||||
Sbjct: 1685 gcccagaaagttatgattcagtcaagcaacagctcggttttggtgaagttcaagcagcaa 1744
Query: 1841 gccaagtataaccttgtgtacaagatcgacgaagaagtgaaagacgccgcgccttcgtcc 1900
| ||||| |||||||||||| |||| |||| || || || |||||||||||||| |||
Sbjct: 1745 acgaagtacgaccttgtgtacatgatcaacgaggaggtcaaggacgccgcgccttcttcc 1804
Query: 1901 cttgcagatatcaagaagtttgcggatgccgtttc 1935
|| || | |||||||||||||| |||||||||||
Sbjct: 1805 ctcgctgccatcaagaagtttgccgatgccgtttc 1839
Score = 56.0 bits (28), Expect = 7e-04
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 796 tgttgactacatctcatcccctgaagtgagcttcct 831
||||||||| |||||||| |||||||||||||||||
Sbjct: 700 tgttgactatatctcatcacctgaagtgagcttcct 735
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 293 gcgcagaagggctcgacctggaagacgctgagtggcaatgctccaacagtcatagctaag 352
|||||||||| ||| | |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 185 gcgcagaaggcctcttcttggaagacgctgagcggcaatgctccggcaatcatagccaag 244
Query: 353 gg 354
||
Sbjct: 245 gg 246
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 437 gatgttcggttaaccaaggatgccgttggcatctgccttccagacataaaaatggataac 496
||||||||||| |||||||||| |||| |||||||| || |||||||| ||||| |||
Sbjct: 335 gatgttcggttgaccaaggatggtcttggtatctgcctgccggacataaagatggacaac 394
Query: 497 tg 498
||
Sbjct: 395 tg 396
Score = 48.1 bits (24), Expect = 0.17
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2316 tgacggactcggacgtggcggagccgcc 2343
|||||| |||||||||||||||||||||
Sbjct: 2202 tgacgggctcggacgtggcggagccgcc 2229
Score = 44.1 bits (22), Expect = 2.6
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2048 atgaacgagttcctttctcagccgtatgacttcttctc 2085
|||||||||||| ||||||||| || |||||||||||
Sbjct: 1949 atgaacgagttcgcttctcagccatacgacttcttctc 1986
>emb|CR855185.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: B0806H07, complete
sequence
Length = 21360
Score = 157 bits (79), Expect = 3e-34
Identities = 273/335 (81%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 868 gcttgtgttccgttttcttgatgaaggccttgtcgagccatcaacaaaccagacatatgg 927
|||||||||||||||||||||||| || |||| ||||| || || |||||||||||
Sbjct: 3239 gcttgtgttccgttttcttgatgagagcacaatcgaaccatctaccaaacagacatatgg 3298
Query: 928 ctcaatgctgaaaaatctatcatccatcaagacttttgcttctggaatacttgtccccaa 987
|| ||| |||||||| | ||| ||||||| || || ||||| ||| ||||||| ||
Sbjct: 3299 atccatgttgaaaaattttacatttgtcaagacattcgcatctggtataattgtcccaaa 3358
Query: 988 acactatatctggcctgttacggcagataattatctgcaaccctccacttcagtcgtgga 1047
| | ||||||||||||||| | |||||||||||||| |||| |||||||||||| ||
Sbjct: 3359 aaaatatatctggcctgtttcaccagataattatctggaaccacacacttcagtcgtcga 3418
Query: 1048 tgatgctcataaggccgacttagaaatttatgctgctgattttgccaacgactttgcgct 1107
|||||||||||| || | || |||||||||||||| | |||||||| |||||| | |
Sbjct: 3419 tgatgctcataaagcagggttggaaatttatgctgccaactttgccaatgactttatgtt 3478
Query: 1108 cagctacaactacagctatgatccgttagcagaatacct-tcgcttcatcgataatggcg 1166
||| |||||| | ||||||||||| ||||||||||| || ||| ||||| || ||||| |
Sbjct: 3479 cagttacaaccatagctatgatccattagcagaatatctctcg-ttcattgacaatggtg 3537
Query: 1167 ccttctgtgttgatggtctcttgactgatttccct 1201
| |||| ||||||||| | |||||||||||||||
Sbjct: 3538 ctttctctgttgatggagtattgactgatttccct 3572
Score = 149 bits (75), Expect = 6e-32
Identities = 141/163 (86%)
Strand = Plus / Plus
Query: 1268 cctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagct 1327
|||||| |||| |||||||||||||||||||| || | || | ||||||||| ||||||
Sbjct: 3819 cctctaattatttcccacaatggtgctagtggggattacccagcctgcactgatctagct 3878
Query: 1328 tatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaa 1387
||||| || ||||||| ||||||||| ||||||||||| || |||| ||| |||| |||
Sbjct: 3879 tatcaaaaagcagttgatgatggtgccgatgtcattgattgccctgtccaattgaccaaa 3938
Query: 1388 gatggcataccaatatgcatgagttccattgacctaatggatg 1430
|||||||||||||||||||||||||||||| || | |||||||
Sbjct: 3939 gatggcataccaatatgcatgagttccattaacttgatggatg 3981
Score = 105 bits (53), Expect = 8e-19
Identities = 143/173 (82%)
Strand = Plus / Plus
Query: 1763 ggttacagcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactcta 1822
||||||||||| || |||||||||||||| ||||| ||||||| |||||||| | |
Sbjct: 4678 ggttacagcaaccaaactgcccagaaagttatgattcagtcaagcaacagctcggttttg 4737
Query: 1823 gtgaagttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaa 1882
|||||||||||||||| | ||||| |||||||||||| |||| |||| || || ||
Sbjct: 4738 gtgaagttcaagcagcaaacgaagtacgaccttgtgtacatgatcaacgaggaggtcaag 4797
Query: 1883 gacgccgcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttc 1935
|||||||||||||| ||||| || | |||||||||||||| ||||| |||||
Sbjct: 4798 gacgccgcgccttcttccctcgctgccatcaagaagtttgccgatgctgtttc 4850
Score = 60.0 bits (30), Expect = 4e-05
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 722 cagcatgacagtttttacagccagtttaatctgagcatgagaagctatatcctgtctatg 781
|||||||||||||| ||||| ||||| ||| | |||||| || ||| ||||| ||| ||
Sbjct: 3093 cagcatgacagtttctacagtcagttcaatttaagcatgtcaaactacatcctttctgtg 3152
Query: 782 tcaaagcaatacactgttgactacatctcatcccctgaagtgagcttcct 831
||||| | | ||||||||| |||||||| |||||||||||||||||
Sbjct: 3153 tcaaaacgtgttattgttgactatatctcatcacctgaagtgagcttcct 3202
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 437 gatgttcggttaaccaaggatgccgttggcatctgccttccagacataaaaatggataac 496
||||||||||| |||||||||| |||| |||||||| || |||||||| ||||| |||
Sbjct: 2567 gatgttcggttgaccaaggatggtcttggtatctgcctgccggacataaagatggacaac 2626
Query: 497 tg 498
||
Sbjct: 2627 tg 2628
Score = 48.1 bits (24), Expect = 0.17
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2316 tgacggactcggacgtggcggagccgcc 2343
|||||| |||||||||||||||||||||
Sbjct: 5477 tgacgggctcggacgtggcggagccgcc 5504
Score = 44.1 bits (22), Expect = 2.6
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2048 atgaacgagttcctttctcagccgtatgacttcttctc 2085
|||||||||||| ||||||||| || |||||||||||
Sbjct: 4960 atgaacgagttcgcttctcagccatacgacttcttctc 4997
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 155 bits (78), Expect = 1e-33
Identities = 267/330 (80%)
Strand = Plus / Plus
Query: 868 gcttgtgttccgttttcttgatgaaggccttgtcgagccatcaacaaaccagacatatgg 927
|||||||||||||||||| ||||| || |||| ||||| || || |||||||||||
Sbjct: 23583708 gcttgtgttccgttttctcgatgagagcacaatcgaaccatctaccaaacagacatatgg 23583767
Query: 928 ctcaatgctgaaaaatctatcatccatcaagacttttgcttctggaatacttgtccccaa 987
|| ||| |||||||||| ||| ||||||| || || ||||| ||| ||||||| ||
Sbjct: 23583768 atccatgttgaaaaatcttacatttgtcaagacattcgcatctggtataattgtcccaaa 23583827
Query: 988 acactatatctggcctgttacggcagataattatctgcaaccctccacttcagtcgtgga 1047
| | ||||||||||||||| | |||||||||||||| |||| |||||||||||| ||
Sbjct: 23583828 aaaatatatctggcctgtttcaccagataattatctggaaccacacacttcagtcgtcga 23583887
Query: 1048 tgatgctcataaggccgacttagaaatttatgctgctgattttgccaacgactttgcgct 1107
|||||||||||| || | || |||||||||||||| || |||||||| |||||| | |
Sbjct: 23583888 tgatgctcataaagcagggttggaaatttatgctgccgactttgccaatgactttatgtt 23583947
Query: 1108 cagctacaactacagctatgatccgttagcagaataccttcgcttcatcgataatggcgc 1167
||| |||||| | ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct: 23583948 cagttacaaccatagctatgatccattagcagaatatctctcattcattgacaatggtgc 23584007
Query: 1168 cttctgtgttgatggtctcttgactgattt 1197
|||| ||||||||| | |||||||||||
Sbjct: 23584008 tttctctgttgatggagtattgactgattt 23584037
Score = 149 bits (75), Expect = 6e-32
Identities = 141/163 (86%)
Strand = Plus / Plus
Query: 1268 cctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagct 1327
|||||| |||| |||||||||||||||||||| || | || | ||||||||| ||||||
Sbjct: 23584287 cctctaattatttcccacaatggtgctagtggggattacccagcctgcactgatctagct 23584346
Query: 1328 tatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaa 1387
||||| || ||||||| ||||||||| ||||||||||| || |||| ||| |||| |||
Sbjct: 23584347 tatcaaaaagcagttgatgatggtgccgatgtcattgattgccctgtccaattgaccaaa 23584406
Query: 1388 gatggcataccaatatgcatgagttccattgacctaatggatg 1430
|||||||||||||||||||||||||||||| || | |||||||
Sbjct: 23584407 gatggcataccaatatgcatgagttccattaacttgatggatg 23584449
Score = 113 bits (57), Expect = 3e-21
Identities = 144/173 (83%)
Strand = Plus / Plus
Query: 1763 ggttacagcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactcta 1822
||||||||||| || |||||||||||||| ||||| ||||||| |||||||| | |
Sbjct: 23585152 ggttacagcaaccaaactgcccagaaagttatgattcagtcaagcaacagctcggttttg 23585211
Query: 1823 gtgaagttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaa 1882
|||||||||||||||| | ||||| |||||||||||| |||| |||| || || ||
Sbjct: 23585212 gtgaagttcaagcagcaaacgaagtacgaccttgtgtacatgatcaacgaggaggtcaag 23585271
Query: 1883 gacgccgcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttc 1935
|||||||||||||| ||||| || | |||||||||||||| |||||||||||
Sbjct: 23585272 gacgccgcgccttcttccctcgctgccatcaagaagtttgccgatgccgtttc 23585324
Score = 56.0 bits (28), Expect = 7e-04
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 796 tgttgactacatctcatcccctgaagtgagcttcct 831
||||||||| |||||||| |||||||||||||||||
Sbjct: 23583636 tgttgactatatctcatcacctgaagtgagcttcct 23583671
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 437 gatgttcggttaaccaaggatgccgttggcatctgccttccagacataaaaatggataac 496
||||||||||| |||||||||| |||| |||||||| || |||||||| ||||| |||
Sbjct: 23583036 gatgttcggttgaccaaggatggtcttggtatctgcctgccggacataaagatggacaac 23583095
Query: 497 tg 498
||
Sbjct: 23583096 tg 23583097
Score = 48.1 bits (24), Expect = 0.17
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2316 tgacggactcggacgtggcggagccgcc 2343
|||||| |||||||||||||||||||||
Sbjct: 23585951 tgacgggctcggacgtggcggagccgcc 23585978
Score = 44.1 bits (22), Expect = 2.6
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2048 atgaacgagttcctttctcagccgtatgacttcttctc 2085
|||||||||||| ||||||||| || |||||||||||
Sbjct: 23585434 atgaacgagttcgcttctcagccatacgacttcttctc 23585471
>emb|AL606447.3 |OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
complete sequence
Length = 130273
Score = 155 bits (78), Expect = 1e-33
Identities = 267/330 (80%)
Strand = Plus / Plus
Query: 868 gcttgtgttccgttttcttgatgaaggccttgtcgagccatcaacaaaccagacatatgg 927
|||||||||||||||||| ||||| || |||| ||||| || || |||||||||||
Sbjct: 26389 gcttgtgttccgttttctcgatgagagcacaatcgaaccatctaccaaacagacatatgg 26448
Query: 928 ctcaatgctgaaaaatctatcatccatcaagacttttgcttctggaatacttgtccccaa 987
|| ||| |||||||||| ||| ||||||| || || ||||| ||| ||||||| ||
Sbjct: 26449 atccatgttgaaaaatcttacatttgtcaagacattcgcatctggtataattgtcccaaa 26508
Query: 988 acactatatctggcctgttacggcagataattatctgcaaccctccacttcagtcgtgga 1047
| | ||||||||||||||| | |||||||||||||| |||| |||||||||||| ||
Sbjct: 26509 aaaatatatctggcctgtttcaccagataattatctggaaccacacacttcagtcgtcga 26568
Query: 1048 tgatgctcataaggccgacttagaaatttatgctgctgattttgccaacgactttgcgct 1107
|||||||||||| || | || |||||||||||||| || |||||||| |||||| | |
Sbjct: 26569 tgatgctcataaagcagggttggaaatttatgctgccgactttgccaatgactttatgtt 26628
Query: 1108 cagctacaactacagctatgatccgttagcagaataccttcgcttcatcgataatggcgc 1167
||| |||||| | ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct: 26629 cagttacaaccatagctatgatccattagcagaatatctctcattcattgacaatggtgc 26688
Query: 1168 cttctgtgttgatggtctcttgactgattt 1197
|||| ||||||||| | |||||||||||
Sbjct: 26689 tttctctgttgatggagtattgactgattt 26718
Score = 149 bits (75), Expect = 6e-32
Identities = 141/163 (86%)
Strand = Plus / Plus
Query: 1268 cctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagct 1327
|||||| |||| |||||||||||||||||||| || | || | ||||||||| ||||||
Sbjct: 26968 cctctaattatttcccacaatggtgctagtggggattacccagcctgcactgatctagct 27027
Query: 1328 tatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaa 1387
||||| || ||||||| ||||||||| ||||||||||| || |||| ||| |||| |||
Sbjct: 27028 tatcaaaaagcagttgatgatggtgccgatgtcattgattgccctgtccaattgaccaaa 27087
Query: 1388 gatggcataccaatatgcatgagttccattgacctaatggatg 1430
|||||||||||||||||||||||||||||| || | |||||||
Sbjct: 27088 gatggcataccaatatgcatgagttccattaacttgatggatg 27130
Score = 113 bits (57), Expect = 3e-21
Identities = 144/173 (83%)
Strand = Plus / Plus
Query: 1763 ggttacagcaaacagactgcccagaaagtgatgatccagtcaacaaacagctcaactcta 1822
||||||||||| || |||||||||||||| ||||| ||||||| |||||||| | |
Sbjct: 27833 ggttacagcaaccaaactgcccagaaagttatgattcagtcaagcaacagctcggttttg 27892
Query: 1823 gtgaagttcaagcagctggccaagtataaccttgtgtacaagatcgacgaagaagtgaaa 1882
|||||||||||||||| | ||||| |||||||||||| |||| |||| || || ||
Sbjct: 27893 gtgaagttcaagcagcaaacgaagtacgaccttgtgtacatgatcaacgaggaggtcaag 27952
Query: 1883 gacgccgcgccttcgtcccttgcagatatcaagaagtttgcggatgccgtttc 1935
|||||||||||||| ||||| || | |||||||||||||| |||||||||||
Sbjct: 27953 gacgccgcgccttcttccctcgctgccatcaagaagtttgccgatgccgtttc 28005
Score = 56.0 bits (28), Expect = 7e-04
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 796 tgttgactacatctcatcccctgaagtgagcttcct 831
||||||||| |||||||| |||||||||||||||||
Sbjct: 26317 tgttgactatatctcatcacctgaagtgagcttcct 26352
Score = 52.0 bits (26), Expect = 0.011
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 437 gatgttcggttaaccaaggatgccgttggcatctgccttccagacataaaaatggataac 496
||||||||||| |||||||||| |||| |||||||| || |||||||| ||||| |||
Sbjct: 25717 gatgttcggttgaccaaggatggtcttggtatctgcctgccggacataaagatggacaac 25776
Query: 497 tg 498
||
Sbjct: 25777 tg 25778
Score = 48.1 bits (24), Expect = 0.17
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2316 tgacggactcggacgtggcggagccgcc 2343
|||||| |||||||||||||||||||||
Sbjct: 28632 tgacgggctcggacgtggcggagccgcc 28659
Score = 44.1 bits (22), Expect = 2.6
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2048 atgaacgagttcctttctcagccgtatgacttcttctc 2085
|||||||||||| ||||||||| || |||||||||||
Sbjct: 28115 atgaacgagttcgcttctcagccatacgacttcttctc 28152
>dbj|AK090486.1 | Homo sapiens mRNA for FLJ00410 protein
Length = 4515
Score = 44.1 bits (22), Expect = 2.6
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2337 agccgccccttcctcctgtgag 2358
||||||||||||||||||||||
Sbjct: 193 agccgccccttcctcctgtgag 214
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 473,221,507
Number of extensions: 25596971
Number of successful extensions: 138535
Number of sequences better than 10.0: 64
Number of HSP's gapped: 138465
Number of HSP's successfully gapped: 162
Length of query: 2695
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2672
Effective length of database: 18,503,978,556
Effective search space: 49442630701632
Effective search space used: 49442630701632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)