ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37l22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g08554:12005.t004720:unspliced-genomic expressed pro... 33 0.66
2LOC_Os10g32960:12010.t02604:unspliced-genomic peroxisome ass... 33 0.91
3LOC_Os06g01640:12006.t00061:unspliced-genomic protein argini... 32 1.2
4LOC_Os08g21330:12008.t01929:unspliced-genomic formamidopyrim... 32 1.7
5LOC_Os12g43120:12012.t03984:unspliced-genomic expressed protein 32 1.7
6LOC_Os03g52040:12003.t04532:unspliced-genomic serine carboxy... 32 1.7
7LOC_Os02g01500:12002.t00050:unspliced-genomic dihydrolipoyll... 31 2.4
8LOC_Os10g30610:12010.t02393:unspliced-genomic ABC-2 type tra... 30 6.1
9LOC_Os07g43640:12007.t04009:unspliced-genomic extracellular ... 29 8.4
10LOC_Os06g17230:12006.t01595:unspliced-genomic transposon pro... 29 8.4
11LOC_Os01g50610:12001.t04495:unspliced-genomic jasmonate O-me... 29 8.4
12LOC_Os01g32700:12001.t02842:unspliced-genomic transposon pro... 29 8.4

>LOC_Os05g08554:12005.t004720:unspliced-genomic expressed protein|
          Length = 2656
 Score = 33.1 bits (66), Expect = 0.66
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3 / +3

                                   
Query: 36  SRHVILFFL*ENAKTLRFISLKRE 107
           SR ++  FL ENA+ L FISL+RE
Sbjct: 285 SRSLLFIFLLENAEELHFISLRRE 356



 Score = 32.2 bits (64), Expect = 1.2
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2 / +2

                                
Query: 53  FFSLRKRKDSAFHFIEKGDSL 115
           +FS RKR+  AFHFIEK + L
Sbjct: 302 YFSSRKRRRIAFHFIEKREVL 364



to top

>LOC_Os10g32960:12010.t02604:unspliced-genomic peroxisome assembly protein 12, putative, expressed|
          Length = 4900

 Score = 32.7 bits (65), Expect = 0.91
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +1 / -1

                              
Query: 145 HVILLAYSCNWHTLYYYFL 201
           HVILLA SC  HT++ YFL
Sbjct: 988 HVILLAISCPVHTVF*YFL 932



to top

>LOC_Os06g01640:12006.t00061:unspliced-genomic protein arginine N-methyltransferase 7, putative, expressed|
          Length = 6978

 Score = 32.2 bits (64), Expect = 1.2
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3 / -3

                                      
Query: 122  VLLNYLPFQ*NETQSLCVFSKKKKNN 45
            +LL +    *N+TQ  CVF KKK+NN
Sbjct: 1828 ILLFFSSS**NDTQLSCVFKKKKQNN 1751



to top

>LOC_Os08g21330:12008.t01929:unspliced-genomic formamidopyrimidine-DNA glycosylase, putative, expressed|
          Length = 8599

 Score = 31.8 bits (63), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3 / +3

                                 
Query: 116  LNYLPFQ*NETQSLCVFSKKK 54
            + +LP+ *NETQ  CVF +KK
Sbjct: 1029 IRFLPY**NETQLNCVFERKK 1091



to top

>LOC_Os12g43120:12012.t03984:unspliced-genomic expressed protein|
          Length = 8386

 Score = 31.8 bits (63), Expect = 1.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2 / -3

                                
Query: 44   CYSFFSLRKRKDSAFHFIEK 103
            C  FFS RKRK +  HFI+K
Sbjct: 6707 CKGFFSPRKRKRTVLHFIKK 6648



to top

>LOC_Os03g52040:12003.t04532:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed|
          Length = 5684

 Score = 31.8 bits (63), Expect = 1.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1 / +1

                                      
Query: 163  YSCNWHTLYYYFLYEATF*SRTKHED 240
            YSCNW+ LY   LY   F +  + +D
Sbjct: 5437 YSCNWYCLYEELLYLPCFPTTNRRQD 5514



to top

>LOC_Os02g01500:12002.t00050:unspliced-genomic dihydrolipoyllysine-residue acetyltransferase component of|
            pyruvatedehydrogenase complex, putative, expressed
          Length = 6316

 Score = 31.3 bits (62), Expect = 2.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2 / -2

                                               
Query: 53   FFSLRKRKDSAFHFIEKGDSLAVHASEEEAHMLFF 157
            FFS +KR+ +A HFI+K +      S   +H   F
Sbjct: 1989 FFSPKKRRRTALHFIKKREIFIKKGSRNPSHQEHF 1885



to top

>LOC_Os10g30610:12010.t02393:unspliced-genomic ABC-2 type transporter family protein, expressed|
          Length = 7933

 Score = 29.9 bits (59), Expect = 6.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1 / +2

                                    
Query: 169  CNWHTLYYYFLYEATF*SRTKHED 240
            CNWH LY+ +L  A   S  KH +
Sbjct: 7013 CNWHRLYFCYLV*ARISSIGKHNN 7084



to top

>LOC_Os07g43640:12007.t04009:unspliced-genomic extracellular ribonuclease LE precursor, putative|
          Length = 2455

 Score = 29.5 bits (58), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1 / +2

                                   
Query: 145 HVILLAYSCNWHTLYYYFLYEATF 216
           HVI+LAY  + + + Y+F YE  F
Sbjct: 926 HVIMLAYLFSEYNINYWFRYELCF 997



to top

>LOC_Os06g17230:12006.t01595:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 5502

 Score = 29.5 bits (58), Expect = 8.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1 / +3

                                   
Query: 145 HVILLAYSCNWHTLYYYFLYEATF 216
           H +LL   CN+H  Y  F+Y   F
Sbjct: 609 HFVLLKKLCNYHLFYCDFMYHQIF 680



to top

>LOC_Os01g50610:12001.t04495:unspliced-genomic jasmonate O-methyltransferase, putative, expressed|
          Length = 2844

 Score = 29.5 bits (58), Expect = 8.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1 / +2

                                             
Query: 112 FSSTRL*GGGSHVILLAYSCNWHTLYYYFLYEAT 213
           FS   L   GS + +   SC WH L  + LY+ T
Sbjct: 251 FSLKWLVNFGSEMAVRILSCEWHCLLRHHLYKVT 352



to top

>LOC_Os01g32700:12001.t02842:unspliced-genomic transposon protein, putative, unclassified|
          Length = 2017

 Score = 29.5 bits (58), Expect = 8.4
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1 / -1

                                
Query: 145  HVILLAYSCNWHTLYYYFLY 204
            H ++L+ SCN+H  Y++FL+
Sbjct: 1546 HNMVLSNSCNFHLDYFFFLH 1487


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 88,713,300
Number of extensions: 1021744
Number of successful extensions: 3091
Number of sequences better than 10.0: 12
Length of query: 105
Length of database: 55,613,886
Length adjustment: 46
Effective length of query: 59
Effective length of database: 53,025,098
Effective search space: 3128480782
Effective search space used: 3128480782
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top