| Clone Name | FLbaf37l22 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g08554:12005.t004720:unspliced-genomic expressed protein| Length = 2656 Score = 33.1 bits (66), Expect = 0.66 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +3 / +3 Query: 36 SRHVILFFL*ENAKTLRFISLKRE 107 SR ++ FL ENA+ L FISL+RE Sbjct: 285 SRSLLFIFLLENAEELHFISLRRE 356 Score = 32.2 bits (64), Expect = 1.2 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +2 / +2 Query: 53 FFSLRKRKDSAFHFIEKGDSL 115 +FS RKR+ AFHFIEK + L Sbjct: 302 YFSSRKRRRIAFHFIEKREVL 364
>LOC_Os10g32960:12010.t02604:unspliced-genomic peroxisome assembly protein 12, putative, expressed| Length = 4900 Score = 32.7 bits (65), Expect = 0.91 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +1 / -1 Query: 145 HVILLAYSCNWHTLYYYFL 201 HVILLA SC HT++ YFL Sbjct: 988 HVILLAISCPVHTVF*YFL 932
>LOC_Os06g01640:12006.t00061:unspliced-genomic protein arginine N-methyltransferase 7, putative, expressed| Length = 6978 Score = 32.2 bits (64), Expect = 1.2 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 / -3 Query: 122 VLLNYLPFQ*NETQSLCVFSKKKKNN 45 +LL + *N+TQ CVF KKK+NN Sbjct: 1828 ILLFFSSS**NDTQLSCVFKKKKQNN 1751
>LOC_Os08g21330:12008.t01929:unspliced-genomic formamidopyrimidine-DNA glycosylase, putative, expressed| Length = 8599 Score = 31.8 bits (63), Expect = 1.7 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3 / +3 Query: 116 LNYLPFQ*NETQSLCVFSKKK 54 + +LP+ *NETQ CVF +KK Sbjct: 1029 IRFLPY**NETQLNCVFERKK 1091
>LOC_Os12g43120:12012.t03984:unspliced-genomic expressed protein| Length = 8386 Score = 31.8 bits (63), Expect = 1.7 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 / -3 Query: 44 CYSFFSLRKRKDSAFHFIEK 103 C FFS RKRK + HFI+K Sbjct: 6707 CKGFFSPRKRKRTVLHFIKK 6648
>LOC_Os03g52040:12003.t04532:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 5684 Score = 31.8 bits (63), Expect = 1.7 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +1 / +1 Query: 163 YSCNWHTLYYYFLYEATF*SRTKHED 240 YSCNW+ LY LY F + + +D Sbjct: 5437 YSCNWYCLYEELLYLPCFPTTNRRQD 5514
>LOC_Os02g01500:12002.t00050:unspliced-genomic dihydrolipoyllysine-residue acetyltransferase component of| pyruvatedehydrogenase complex, putative, expressed Length = 6316 Score = 31.3 bits (62), Expect = 2.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / -2 Query: 53 FFSLRKRKDSAFHFIEKGDSLAVHASEEEAHMLFF 157 FFS +KR+ +A HFI+K + S +H F Sbjct: 1989 FFSPKKRRRTALHFIKKREIFIKKGSRNPSHQEHF 1885
>LOC_Os10g30610:12010.t02393:unspliced-genomic ABC-2 type transporter family protein, expressed| Length = 7933 Score = 29.9 bits (59), Expect = 6.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 / +2 Query: 169 CNWHTLYYYFLYEATF*SRTKHED 240 CNWH LY+ +L A S KH + Sbjct: 7013 CNWHRLYFCYLV*ARISSIGKHNN 7084
>LOC_Os07g43640:12007.t04009:unspliced-genomic extracellular ribonuclease LE precursor, putative| Length = 2455 Score = 29.5 bits (58), Expect = 8.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 / +2 Query: 145 HVILLAYSCNWHTLYYYFLYEATF 216 HVI+LAY + + + Y+F YE F Sbjct: 926 HVIMLAYLFSEYNINYWFRYELCF 997
>LOC_Os06g17230:12006.t01595:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5502 Score = 29.5 bits (58), Expect = 8.4 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +1 / +3 Query: 145 HVILLAYSCNWHTLYYYFLYEATF 216 H +LL CN+H Y F+Y F Sbjct: 609 HFVLLKKLCNYHLFYCDFMYHQIF 680
>LOC_Os01g50610:12001.t04495:unspliced-genomic jasmonate O-methyltransferase, putative, expressed| Length = 2844 Score = 29.5 bits (58), Expect = 8.4 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 / +2 Query: 112 FSSTRL*GGGSHVILLAYSCNWHTLYYYFLYEAT 213 FS L GS + + SC WH L + LY+ T Sbjct: 251 FSLKWLVNFGSEMAVRILSCEWHCLLRHHLYKVT 352
>LOC_Os01g32700:12001.t02842:unspliced-genomic transposon protein, putative, unclassified| Length = 2017 Score = 29.5 bits (58), Expect = 8.4 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = +1 / -1 Query: 145 HVILLAYSCNWHTLYYYFLY 204 H ++L+ SCN+H Y++FL+ Sbjct: 1546 HNMVLSNSCNFHLDYFFFLH 1487 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 88,713,300 Number of extensions: 1021744 Number of successful extensions: 3091 Number of sequences better than 10.0: 12 Length of query: 105 Length of database: 55,613,886 Length adjustment: 46 Effective length of query: 59 Effective length of database: 53,025,098 Effective search space: 3128480782 Effective search space used: 3128480782 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)