| Clone Name | FLbaf37l22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_538678.2| PREDICTED: Canis familiaris similar to CG3520-PA (LOC481557), mRNA Length = 5504 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 tttagcatattcctgtaactgg 177 |||||||||||||||||||||| Sbjct: 665 tttagcatattcctgtaactgg 644
>dbj|AB108174.1| Phleum pratense DNA, SSR, microsatellite A08-D10 Length = 605 Score = 44.1 bits (22), Expect = 0.29 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 64 gagaaaacgcaaa-gactctgcgtttcatttcattgaa 100 ||||||||||||| || | ||||||||||||||||||| Sbjct: 176 gagaaaacgcaaaagaatttgcgtttcatttcattgaa 213
>emb|CT827817.8| Pig DNA sequence from clone CH242-113C19 on chromosome 7, complete sequence Length = 225292 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tctgaggaggaggctcacat 147 |||||||||||||||||||| Sbjct: 169377 tctgaggaggaggctcacat 169396
>ref|XM_396605.3| PREDICTED: Apis mellifera similar to CG2321-PA (LOC413154), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tatattattactttctgtat 204 |||||||||||||||||||| Sbjct: 894 tatattattactttctgtat 875
>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence Length = 127131 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tggcacaccttatattatta 194 |||||||||||||||||||| Sbjct: 86521 tggcacaccttatattatta 86502
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acatgttattcttttagcat 163 |||||||||||||||||||| Sbjct: 11980 acatgttattcttttagcat 11999
>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181829 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 tattcttttagcatattcctgtaa 173 |||||||||| ||||||||||||| Sbjct: 171030 tattcttttaacatattcctgtaa 171053
>gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, complete sequence Length = 186185 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tggagatacttcagagtataataa 33 |||||||||||||||||| ||||| Sbjct: 116938 tggagatacttcagagtaaaataa 116915
>gb|AC012670.7| Homo sapiens BAC clone RP11-514A9 from 2, complete sequence Length = 194725 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tctagtctagaacaaaacat 234 |||||||||||||||||||| Sbjct: 111628 tctagtctagaacaaaacat 111609
>gb|AC074110.5|AC074110 Arabidopsis thaliana chromosome 1 BAC T18C15 genomic sequence, complete sequence Length = 20509 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tattcttttagcatattcct 169 |||||||||||||||||||| Sbjct: 13082 tattcttttagcatattcct 13063
>gb|AC079674.4|AC079674 Arabidopsis thaliana chromosome 1 BAC F10F5 genomic sequence, complete sequence Length = 48940 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tattcttttagcatattcct 169 |||||||||||||||||||| Sbjct: 44182 tattcttttagcatattcct 44201
>gb|AF239839.1|AF239839 Xenopus laevis noggin gene, partial sequence Length = 1600 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 catgttattcttttagcata 164 |||||||||||||||||||| Sbjct: 365 catgttattcttttagcata 384
>gb|AY104543.1| Zea mays PCO131788 mRNA sequence Length = 1707 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ggagatacttcagagtataa 30 |||||||||||||||||||| Sbjct: 1323 ggagatacttcagagtataa 1342
>emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete sequence Length = 227165 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 ctttctgtatgaggcaactttcta 218 ||||||||||||||||| |||||| Sbjct: 197586 ctttctgtatgaggcaattttcta 197609 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 49,642,818 Number of extensions: 2732865 Number of successful extensions: 184697 Number of sequences better than 10.0: 14 Number of HSP's gapped: 184696 Number of HSP's successfully gapped: 14 Length of query: 316 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 294 Effective length of database: 18,508,616,841 Effective search space: 5441533351254 Effective search space used: 5441533351254 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)