ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39n07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073854:Os03g0256400 | 1027 | 0.0 | 2 | AK121866:Os02g0130100 | 45 | 2e-04 | 3 | AK119945: | 40 | 0.006 | 4 | AK106648:Os06g0712900 | 37 | 0.066 | 5 | AK108937: | 33 | 0.56 | 6 | AK101483:Os07g0644300 | 33 | 0.96 | 7 | AK066726:Os07g0644300 | 33 | 0.96 | 8 | Os08g0103400:Os08g0103400 | 30 | 4.8 | 9 | AK070770:Os05g0369500 | 30 | 6.2 | 10 | AK067898:Os05g0400800 | 30 | 6.2 | 11 | AK065701:Os05g0400800 | 30 | 6.2 | 12 | AK102483:Os03g0145700 | 30 | 6.2 | 13 | Os07g0142700:Os07g0142700 | 30 | 8.1 | 14 | AK109964: | 30 | 8.1 | 15 | AK120971:Os05g0415600 | 30 | 8.1 | 16 | AK058669:Os12g0289600 | 30 | 8.1 |
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>AK073854:Os03g0256400 | Length = 568 Score = 1027 bits (2655), Expect = 0.0 Identities = 514/568 (90%), Positives = 544/568 (95%) Frame = +3 Query: 81 MATGAANHALPCSVGRSKRTNQRRRPASLSVRASGDANTVTLLDYGAGNVRSVRNAIRHL 260 MA + +A+PCS GR KR +QRR ++++VRASGDA+TVTLLDYGAGNVRSVRNAIRHL Sbjct: 1 MAAATSINAVPCSAGRPKRRSQRRGASTVAVRASGDASTVTLLDYGAGNVRSVRNAIRHL 60 Query: 261 GFNIRDVRSPEDILAADRLVFPGVGAFGSAMDVLNRTGMADALREYIRMDRPFLGICLGL 440 GF IRDVRSPEDILAADRLVFPGVGAFGSAMDVL R+GMADALREYIR DRPFLGICLGL Sbjct: 61 GFGIRDVRSPEDILAADRLVFPGVGAFGSAMDVLTRSGMADALREYIRRDRPFLGICLGL 120 Query: 441 QLLFDSSEENGPVSGLGVIPGVVRRFDSSEGLIVPHIGWNALQITKDTQLLQGADGQHVY 620 QLLFDSSEENGP+SGLGVIPGVVRRFDSS+GLIVPHIGWNAL+ITKDTQLL+GA+G HVY Sbjct: 121 QLLFDSSEENGPISGLGVIPGVVRRFDSSKGLIVPHIGWNALEITKDTQLLKGAEGHHVY 180 Query: 621 FVHSYHALPSDANKDWISLTCNYGESFISSISMGNIQAVQFHPEKSGATGLNIFENFLSP 800 FVHSYHALPSD NK+WIS CNYGESFISSISMGNIQAVQFHPEKSGATGL+I +NFLSP Sbjct: 181 FVHSYHALPSDENKEWISSVCNYGESFISSISMGNIQAVQFHPEKSGATGLSILKNFLSP 240 Query: 801 NSSGAKAPARRKASKLAKRVIACLDVRSNDNGDLVVTKGDQYDVRDHSSSKEVRNLGKPV 980 N+SG+K P+RRKAS LAKRVIACLDVRSND+GDLVVTKGDQYDVRDHSSSKEVRNLGKPV Sbjct: 241 NTSGSKVPSRRKASNLAKRVIACLDVRSNDSGDLVVTKGDQYDVRDHSSSKEVRNLGKPV 300 Query: 981 ELASQYYIDGADEVSFLNITGFRAFPLGDLPMLEVLRCASEKVFVPLTVGGGIRDFTDES 1160 +LASQYYIDGADEVSFLNITGFR FPLGDLPMLEVLRCASEKVFVPLTVGGGIRDFTD + Sbjct: 301 DLASQYYIDGADEVSFLNITGFRDFPLGDLPMLEVLRCASEKVFVPLTVGGGIRDFTDAN 360 Query: 1161 GRYYSSLEVASEYFRSGADKISIGSDAVFAAEAYLQTGVKTGKSSLEQISRVYGNQAVVV 1340 GRYYSSLEVASEYFRSGADKISIGSDAVFAAEAYLQTGVKTGKSSLEQISRVYGNQAVVV Sbjct: 361 GRYYSSLEVASEYFRSGADKISIGSDAVFAAEAYLQTGVKTGKSSLEQISRVYGNQAVVV 420 Query: 1341 SIDPRRVYVKSPDEVQFRTVKVSSKGPLGEEYAWYQCTVSGGRDSRPIGAYELAKAVEEL 1520 SIDPRRVYVK+P+EVQF+TVKVS+KGPLGEEYAWYQCTVSGGRDSRPIGAYELAKAVEEL Sbjct: 421 SIDPRRVYVKNPEEVQFKTVKVSNKGPLGEEYAWYQCTVSGGRDSRPIGAYELAKAVEEL 480 Query: 1521 GAGEILLNCIDCDGQGGGFDIDLIKMVSDAVTIPVIASSGAGAVEHFSEVFEKTNASAAL 1700 GAGEILLNCIDCDGQG GFDIDL+KMVSDAVTIPVIASSGAG VEHFSEVFEKTNASAAL Sbjct: 481 GAGEILLNCIDCDGQGCGFDIDLVKMVSDAVTIPVIASSGAGTVEHFSEVFEKTNASAAL 540 Query: 1701 AAGIFHRKEVPILAVKEHLVDAGVEVRM 1784 AAGIFHRKEVPI AVKEHLVDAGVEVR+ Sbjct: 541 AAGIFHRKEVPISAVKEHLVDAGVEVRV 568
>AK121866:Os02g0130100 | Length = 255 Score = 44.7 bits (104), Expect = 2e-04 Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 22/191 (11%) Frame = +3 Query: 246 AIRHLGFNIRDVRSPEDILAADRLVFPGVGAFGSAMDVLNRTGMADALREYIRMDRPFLG 425 A+R +G +VR PE + D L+ PG G + + N + ALRE++ RP G Sbjct: 19 ALRRIGVRGVEVRKPEQLQGLDSLIIPG-GESTTMAKLANYHNLFPALREFVGTGRPVWG 77 Query: 426 ICLGLQLLFDSS--EENGPVSGLGVIPGVVRRFDSSEGLIVPHIGWNALQITKDTQLLQG 599 C GL L + + +++G +G + V R L L + + G Sbjct: 78 TCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQL---QSFETELSVPMLAEKEGG 134 Query: 600 ADGQHVYFVHSYHALPSDAN----------KDWISLTCNYGES----------FISSISM 719 +D F+ + L +N D S+T GE I ++ Sbjct: 135 SDTCRGVFIRAPAILDVGSNVEVLADCPVPSDRPSITIASGEGVEEEVYSKDRVIVAVRQ 194 Query: 720 GNIQAVQFHPE 752 GNI A FHPE Sbjct: 195 GNILATAFHPE 205
>AK119945: | Length = 361 Score = 40.0 bits (92), Expect = 0.006 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +3 Query: 279 VRSPEDILAADRLVFPGVGAFGSAMDVLNRTGMADALREYIRMDRPFLGICLGLQLLFDS 458 VR+PE + D L+ PG + ++ R G+ + LR+++R RP G C G+ ++ Sbjct: 69 VRTPEQLGECDALIIPGGESTAISLG-CERIGLLEPLRQWVRAGRPVWGTCAGM-IMLAR 126 Query: 459 SEENGPVSGLGVIPGV 506 G G +I GV Sbjct: 127 EASGGKKGGQQLIGGV 142
>AK106648:Os06g0712900 | Length = 421 Score = 36.6 bits (83), Expect = 0.066 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +3 Query: 1500 AKAVEELGAGEILLNCI---DCDGQGGGFDIDLIKMVSDAVTIPVIASSGAGAVEHFSEV 1670 AK +EE GA + ++ + DG+ D D IK V DA+ IPV+A+ ++ + Sbjct: 229 AKMLEEAGASLVAVHGRTRDEKDGKKFRADWDAIKAVKDALRIPVLANGNIRHLDDVKDC 288 Query: 1671 FEKTNASAALAA 1706 E T A L+A Sbjct: 289 LEHTGADGVLSA 300
>AK108937: | Length = 173 Score = 33.5 bits (75), Expect = 0.56 Identities = 23/68 (33%), Positives = 27/68 (39%) Frame = -1 Query: 349 AEPKAPTPGNTRRSAARMSSGLRTSRMLKPRWRIALRTLRTLPAP*SSKVTVLASPDART 170 A P + +P RR G R PR R R+ P P S TVL +PD R Sbjct: 11 APPPSFSPRRRRRKVETKRGGQRPRAASSPRRRPREEEPRSAPPPPSRACTVLRAPDPRR 70 Query: 169 EREAGLRR 146 R RR Sbjct: 71 HRRLRGRR 78
>AK101483:Os07g0644300 | Length = 931 Score = 32.7 bits (73), Expect = 0.96 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Frame = +3 Query: 984 LASQYYIDGADEV-SFLNITGFRAFPLGD-----LPMLEVLRCASEKVF---VPLTVGGG 1136 +++ + + AD + S LN GFR+ L + E+L +++V V + GG Sbjct: 202 ISANRWQEAADRLASVLNDDGFRSVKGKTQHQLWLELCEILTKHADEVAGLKVDAILRGG 261 Query: 1137 IRDFTDESGRYYSSL----------EVASEYFRSGADKISIGSDAVFAAEAYLQ 1268 IR FTDE G+ ++SL E A + F G + + EAY Q Sbjct: 262 IRKFTDEVGKLWTSLADYYVRRTLYEKARDVFEEGVASVMTVQEFSVVFEAYTQ 315
>AK066726:Os07g0644300 | Length = 931 Score = 32.7 bits (73), Expect = 0.96 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Frame = +3 Query: 984 LASQYYIDGADEV-SFLNITGFRAFPLGD-----LPMLEVLRCASEKVF---VPLTVGGG 1136 +++ + + AD + S LN GFR+ L + E+L +++V V + GG Sbjct: 202 ISANRWQEAADRLASVLNDDGFRSVKGKTQHQLWLELCEILTKHADEVAGLKVDAILRGG 261 Query: 1137 IRDFTDESGRYYSSL----------EVASEYFRSGADKISIGSDAVFAAEAYLQ 1268 IR FTDE G+ ++SL E A + F G + + EAY Q Sbjct: 262 IRKFTDEVGKLWTSLADYYVRRTLYEKARDVFEEGVASVMTVQEFSVVFEAYTQ 315
>Os08g0103400:Os08g0103400 | Length = 318 Score = 30.4 bits (67), Expect = 4.8 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 Query: 1978 FFFWSTQSAILLIYSEIAFPIDVLCTATVTHMLPRYHCYN 1859 F F A LL +S IA P+ V C H++ + YN Sbjct: 25 FIFGPDAKATLLSFSLIAIPVAVFCYFVARHLIHMFPAYN 64
>AK070770:Os05g0369500 | Length = 528 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +3 Query: 159 ASLSVRASGDANTVTLLDYGAGNVR--------SVRNAIRHLGFNIRDVRSPEDILAADR 314 +S S R+S ++TV+ + GAG+ R S + +R +GF + R + D Sbjct: 12 SSRSARSSNYSSTVSSTESGAGSHRRRCKTGAASGGSFLRVVGFQVPGPRDIASQMVRDG 71 Query: 315 LVFPGVGAFGSA 350 V +GAFG A Sbjct: 72 FVLALIGAFGRA 83
>AK067898:Os05g0400800 | Length = 147 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/62 (22%), Positives = 30/62 (48%) Frame = +3 Query: 1524 AGEILLNCIDCDGQGGGFDIDLIKMVSDAVTIPVIASSGAGAVEHFSEVFEKTNASAALA 1703 A E L++ +D +G+ G D +L++++ IPV + G ++ + N+ + Sbjct: 58 ADEFLVHGVDVEGKRLGIDEELVELLGRYSPIPVTYAGGVSTMDDLERIKRAGNSRVDVT 117 Query: 1704 AG 1709 G Sbjct: 118 VG 119
>AK065701:Os05g0400800 | Length = 175 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/62 (22%), Positives = 30/62 (48%) Frame = +3 Query: 1524 AGEILLNCIDCDGQGGGFDIDLIKMVSDAVTIPVIASSGAGAVEHFSEVFEKTNASAALA 1703 A E L++ +D +G+ G D +L++++ IPV + G ++ + N+ + Sbjct: 86 ADEFLVHGVDVEGKRLGIDEELVELLGRYSPIPVTYAGGVSTMDDLERIKRAGNSRVDVT 145 Query: 1704 AG 1709 G Sbjct: 146 VG 147
>AK102483:Os03g0145700 | Length = 257 Score = 30.0 bits (66), Expect = 6.2 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +2 Query: 1409 Q*RSIRRRICMVPVHSKWW 1465 Q RS+R R+C P SKWW Sbjct: 48 QGRSLRLRLCCAPPESKWW 66
>Os07g0142700:Os07g0142700 | Length = 475 Score = 29.6 bits (65), Expect = 8.1 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +3 Query: 1548 IDCDGQGGGFDIDLIKMVSDAVTIPVIASSGAGAVEHFSEVFEKTNASAALAAGIFHRKE 1727 IDCDGQG + VS A +P +G V F + E N + E Sbjct: 99 IDCDGQGAQIVHAVADGVSTADILPPDVDVPSGIVRSFFPLDEAVN---------YDGHE 149 Query: 1728 VPILAVK-EHLVDAGV 1772 +P+ V+ LVD GV Sbjct: 150 LPLFVVQVTELVDGGV 165
>AK109964: | Length = 589 Score = 29.6 bits (65), Expect = 8.1 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +3 Query: 1500 AKAVEELGAGEILLNCIDCDGQGGGFDID---LIKMVSDAVTIPVIASSG 1640 A++ E LGA + ++ +C G G DI L+ ++ + IP IAS G Sbjct: 140 ARSAERLGADMLSIDGFECAGHPGEDDIGGLVLMARAAEELKIPFIASGG 189
>AK120971:Os05g0415600 | Length = 204 Score = 29.6 bits (65), Expect = 8.1 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 13/96 (13%) Frame = -1 Query: 1846 KISNKRKVSHGMLGWSISDYCILTSTPAST-------------RCSFTARMGTSFRWKIP 1706 K+ K + S C T TPAS+ S T SFR P Sbjct: 46 KVRKKENTTSSQGFTSSPGKCTTTFTPASSGKPWELPLMTWSSSISVTILWNASFRMASP 105 Query: 1705 AARAAEAFVFSKTSEKCSTAPAPLLAMTGIVTASDT 1598 +A + V + CS P PLLA+ GI S T Sbjct: 106 SAYLLPSAVILSSLLTCSVCP-PLLAVAGIGHTSTT 140
>AK058669:Os12g0289600 | Length = 235 Score = 29.6 bits (65), Expect = 8.1 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = -2 Query: 1941 FIPKLHFQSMFCALPL*RTCSQDTIVTTTFDRKFPI---NERF--HTVC*AGPSQ 1792 F+PK F + FCA CS+ T R + N RF H +C GP Q Sbjct: 179 FLPKKEFDTYFCAYEPYEQCSRSNSHATCSSRDDNLWNKNSRFGSHLLCWRGPKQ 233 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 54,639,640 Number of extensions: 1262660 Number of successful extensions: 4030 Number of sequences better than 10.0: 16 Number of HSP's gapped: 4023 Number of HSP's successfully gapped: 16 Length of query: 661 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 554 Effective length of database: 11,115,468 Effective search space: 6157969272 Effective search space used: 6157969272 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
