ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39n07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056133.1| Oryza sativa (japonica cultivar-group) Os03g0256400 (Os03g0256400) mRNA, complete cds Length = 1911 Score = 1834 bits (925), Expect = 0.0 Identities = 1441/1613 (89%) Strand = Plus / Plus Query: 169 ccgtgcgcgcatccggcgacgccaacaccgtgactttgctggactacggcgcgggcaacg 228 |||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 151 ccgtgcgcgcgtccggcgacgctagcaccgtgacgctgctggactacggcgcgggcaacg 210 Query: 229 tccgcagcgtgcgcaacgcaatccgccacctcggcttcaacatccgcgacgtgcggagtc 288 | |||||||||||||| || |||||||||||||||||| ||||||||||||||| || | Sbjct: 211 tgcgcagcgtgcgcaatgccatccgccacctcggcttcggcatccgcgacgtgcgcagcc 270 Query: 289 ccgaggacatcctcgccgccgaccgcctcgtattccccggagtcggagctttcggttccg 348 | ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| || | Sbjct: 271 cggaggacatcctcgccgccgaccgcctcgtcttcccgggggtcggcgccttcggctcag 330 Query: 349 ctatggacgttctcaaccgtacaggcatggccgacgcgcttcgtgagtacatccgcatgg 408 | |||||||| |||| ||| | || |||||||||||||| || ||||||||||||| || Sbjct: 331 ccatggacgtcctcacccgctccgggatggccgacgcgctccgcgagtacatccgcaggg 390 Query: 409 accgccccttcctgggtatctgcctcggccttcagctgctattcgattccagcgaggaga 468 ||||||||||||| || |||||||||||||| ||||| || ||||| || |||||||||| Sbjct: 391 accgccccttcctcggcatctgcctcggcctccagcttctcttcgactctagcgaggaga 450 Query: 469 atggccctgtaagcggccttggtgtgatacctggagttgtcaggcgattcgactcttccg 528 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 451 atggcccgataagcggccttggtgtgatacctggagttgtcaggcgatttgactcttcga 510 Query: 529 agggtctcatagtgcctcacattggatggaacgccctccagatcaccaaggacacgcagc 588 |||||||||| |||||||||||||| ||||| || | |||||||||| |||||||||| Sbjct: 511 agggtctcattgtgcctcacattggctggaatgctttggagatcaccaaagacacgcagc 570 Query: 589 tgctgcaaggagctgatggccagcatgtgtacttcgttcactcctatcacgctctacctt 648 |||| | |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct: 571 tgctcaagggagctgaaggccaccatgtgtactttgttcactcctatcatgctctgcctt 630 Query: 649 cagatgcgaacaaagactggatttcgttaacatgtaactacggtgagagtttcatatcat 708 |||||| |||||||| |||||||| | || ||||| || |||||||||||||||| Sbjct: 631 cagatgaaaacaaagagtggatttcttctgtgtgcaactatggcgagagtttcatatcat 690 Query: 709 ctatctcgatgggcaacattcaggcagttcaatttcatccagagaagagcggagctactg 768 | ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 691 ccatctcaatgggcaacattcaggcagttcagtttcacccagaaaagagcggagctactg 750 Query: 769 gacttaacatttttgaaaattttctcagtcccaactcttcaggggcaaaggccccagctc 828 | ||| ||||| |||||||||||||||| ||| ||||||| |||||| |||| ||| Sbjct: 751 ggctttcaattttgaaaaattttctcagtccaaacacttcaggatcaaaggtcccatctc 810 Query: 829 gtagaaaagcatcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatg 888 |||| |||||||| || |||||||||||||| || || || ||||||||||||||||||| Sbjct: 811 gtaggaaagcatcgaaccttgcaaagagagtcattgcatgtcttgatgttcggtcaaatg 870 Query: 889 ataatggggatcttgtagtaacaaaaggtgaccagtatgatgtaagagatcatagtagta 948 ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 871 atagtggggatcttgtggtaacaaaaggtgaccagtatgatgtaagagaccatagtagta 930 Query: 949 gcaaagaggtaagaaaccttggcaagccagtggaattagcaagtcaatactacatagatg 1008 ||||||||||||||||||| || ||||||||||| |||||||| || ||||||||||||| Sbjct: 931 gcaaagaggtaagaaacctcgggaagccagtggatttagcaagccagtactacatagatg 990 Query: 1009 gggctgatgaggtcagcttcttgaatataactggtttccgtgcctttccattgggtgatt 1068 | ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 991 gtgctgatgaggttagcttcttgaatataactggtttccgtgactttccgttgggagatt 1050 Query: 1069 tgccaatgctagaggtactacgctgcgcatctgaaaaagtttttgtgccacttacagttg 1128 ||||||||||||||||| |||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 1051 tgccaatgctagaggtattacgttgtgcatctgagaaagtatttgtgccacttacagttg 1110 Query: 1129 gtggtggtataagagacttcacagatgaaagtggaagatactattcaagcttggaagtag 1188 |||| |||||||||||||||||||||| || ||| |||||||| ||||| |||||||||| Sbjct: 1111 gtggaggtataagagacttcacagatgcaaatgggagatactactcaagtttggaagtag 1170 Query: 1189 catcagaatatttcaggtctggtgctgacaagatttcaattggaagtgatgctgtttttg 1248 | ||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1171 cgtcagagtacttcaggtctggtgctgacaagatttcaattggtagtgatgccgtttttg 1230 Query: 1249 ctgctgaagcctatttacagactggtgtaaagacagggaaaagcagcttggagcaaattt 1308 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1231 ctgctgaagcctatttgcagactggtgtaaagacaggaaaaagcagcttggagcaaatct 1290 Query: 1309 ctagagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgtca 1368 ||||||||||||| || ||||| || |||||||||||||| ||||| ||||| ||||||| Sbjct: 1291 ctagagtatatggcaaccaggcagttgttgtaagtattgaccctcgaagagtatatgtca 1350 Query: 1369 aaagtccagatgaggtgcaatttagaactgtaaaagtgtccagtaaaggtccattaggag 1428 | | ||| || ||||||||||| | ||||||||| ||||||| ||||||||||||||||| Sbjct: 1351 agaatccggaagaggtgcaattcaaaactgtaaaggtgtccaataaaggtccattaggag 1410 Query: 1429 aagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctataggag 1488 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1411 aagaatatgcatggtaccagtgcacagtaagtggtgggcgtgacagccgtcctataggag 1470 Query: 1489 catatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaactgca 1548 ||||||||||||| ||||| || ||||||||||| || ||||||||||| || || |||| Sbjct: 1471 catatgaactagccaaagcagttgaagaattgggtgctggagaaatacttcttaattgca 1530 Query: 1549 ttgattgtgatggtcagggtggtggatttgatatagatttgatcaaaatggtgtcggatg 1608 ||||||||||||| ||||| | |||||||| |||||| || | ||||||||||| |||| Sbjct: 1531 ttgattgtgatggccagggctgcggatttgacatagatctggtaaaaatggtgtcagatg 1590 Query: 1609 ctgtgacaattcctgtcattgcaagcagtggtgctggtgccgtggaacatttttctgaag 1668 ||||||| || ||||||||||||||||||||||||||| | || |||||||||||||| | Sbjct: 1591 ctgtgactatccctgtcattgcaagcagtggtgctggtactgtcgaacatttttctgagg 1650 Query: 1669 tctttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagagg 1728 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1651 tctttgagaaaacaaatgcttctgctgcccttgctgctggcattttccatcggaaagagg 1710 Query: 1729 ttcccattctagcagtgaaagagcatctggtagatgctggtgtggaggtcaga 1781 |||| ||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1711 ttccgatttcagcagtgaaagagcatctggtagatgctggcgtggaggtcaga 1763 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1916 gattggaaatgcaatttcggaataaat 1942 ||||||||||||||||||| ||||||| Sbjct: 1865 gattggaaatgcaatttcgtaataaat 1891
>dbj|AK073854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072A12, full insert sequence Length = 1912 Score = 1834 bits (925), Expect = 0.0 Identities = 1441/1613 (89%) Strand = Plus / Plus Query: 169 ccgtgcgcgcatccggcgacgccaacaccgtgactttgctggactacggcgcgggcaacg 228 |||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 152 ccgtgcgcgcgtccggcgacgctagcaccgtgacgctgctggactacggcgcgggcaacg 211 Query: 229 tccgcagcgtgcgcaacgcaatccgccacctcggcttcaacatccgcgacgtgcggagtc 288 | |||||||||||||| || |||||||||||||||||| ||||||||||||||| || | Sbjct: 212 tgcgcagcgtgcgcaatgccatccgccacctcggcttcggcatccgcgacgtgcgcagcc 271 Query: 289 ccgaggacatcctcgccgccgaccgcctcgtattccccggagtcggagctttcggttccg 348 | ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| || | Sbjct: 272 cggaggacatcctcgccgccgaccgcctcgtcttcccgggggtcggcgccttcggctcag 331 Query: 349 ctatggacgttctcaaccgtacaggcatggccgacgcgcttcgtgagtacatccgcatgg 408 | |||||||| |||| ||| | || |||||||||||||| || ||||||||||||| || Sbjct: 332 ccatggacgtcctcacccgctccgggatggccgacgcgctccgcgagtacatccgcaggg 391 Query: 409 accgccccttcctgggtatctgcctcggccttcagctgctattcgattccagcgaggaga 468 ||||||||||||| || |||||||||||||| ||||| || ||||| || |||||||||| Sbjct: 392 accgccccttcctcggcatctgcctcggcctccagcttctcttcgactctagcgaggaga 451 Query: 469 atggccctgtaagcggccttggtgtgatacctggagttgtcaggcgattcgactcttccg 528 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 452 atggcccgataagcggccttggtgtgatacctggagttgtcaggcgatttgactcttcga 511 Query: 529 agggtctcatagtgcctcacattggatggaacgccctccagatcaccaaggacacgcagc 588 |||||||||| |||||||||||||| ||||| || | |||||||||| |||||||||| Sbjct: 512 agggtctcattgtgcctcacattggctggaatgctttggagatcaccaaagacacgcagc 571 Query: 589 tgctgcaaggagctgatggccagcatgtgtacttcgttcactcctatcacgctctacctt 648 |||| | |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct: 572 tgctcaagggagctgaaggccaccatgtgtactttgttcactcctatcatgctctgcctt 631 Query: 649 cagatgcgaacaaagactggatttcgttaacatgtaactacggtgagagtttcatatcat 708 |||||| |||||||| |||||||| | || ||||| || |||||||||||||||| Sbjct: 632 cagatgaaaacaaagagtggatttcttctgtgtgcaactatggcgagagtttcatatcat 691 Query: 709 ctatctcgatgggcaacattcaggcagttcaatttcatccagagaagagcggagctactg 768 | ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 692 ccatctcaatgggcaacattcaggcagttcagtttcacccagaaaagagcggagctactg 751 Query: 769 gacttaacatttttgaaaattttctcagtcccaactcttcaggggcaaaggccccagctc 828 | ||| ||||| |||||||||||||||| ||| ||||||| |||||| |||| ||| Sbjct: 752 ggctttcaattttgaaaaattttctcagtccaaacacttcaggatcaaaggtcccatctc 811 Query: 829 gtagaaaagcatcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatg 888 |||| |||||||| || |||||||||||||| || || || ||||||||||||||||||| Sbjct: 812 gtaggaaagcatcgaaccttgcaaagagagtcattgcatgtcttgatgttcggtcaaatg 871 Query: 889 ataatggggatcttgtagtaacaaaaggtgaccagtatgatgtaagagatcatagtagta 948 ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 872 atagtggggatcttgtggtaacaaaaggtgaccagtatgatgtaagagaccatagtagta 931 Query: 949 gcaaagaggtaagaaaccttggcaagccagtggaattagcaagtcaatactacatagatg 1008 ||||||||||||||||||| || ||||||||||| |||||||| || ||||||||||||| Sbjct: 932 gcaaagaggtaagaaacctcgggaagccagtggatttagcaagccagtactacatagatg 991 Query: 1009 gggctgatgaggtcagcttcttgaatataactggtttccgtgcctttccattgggtgatt 1068 | ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 992 gtgctgatgaggttagcttcttgaatataactggtttccgtgactttccgttgggagatt 1051 Query: 1069 tgccaatgctagaggtactacgctgcgcatctgaaaaagtttttgtgccacttacagttg 1128 ||||||||||||||||| |||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 1052 tgccaatgctagaggtattacgttgtgcatctgagaaagtatttgtgccacttacagttg 1111 Query: 1129 gtggtggtataagagacttcacagatgaaagtggaagatactattcaagcttggaagtag 1188 |||| |||||||||||||||||||||| || ||| |||||||| ||||| |||||||||| Sbjct: 1112 gtggaggtataagagacttcacagatgcaaatgggagatactactcaagtttggaagtag 1171 Query: 1189 catcagaatatttcaggtctggtgctgacaagatttcaattggaagtgatgctgtttttg 1248 | ||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1172 cgtcagagtacttcaggtctggtgctgacaagatttcaattggtagtgatgccgtttttg 1231 Query: 1249 ctgctgaagcctatttacagactggtgtaaagacagggaaaagcagcttggagcaaattt 1308 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1232 ctgctgaagcctatttgcagactggtgtaaagacaggaaaaagcagcttggagcaaatct 1291 Query: 1309 ctagagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgtca 1368 ||||||||||||| || ||||| || |||||||||||||| ||||| ||||| ||||||| Sbjct: 1292 ctagagtatatggcaaccaggcagttgttgtaagtattgaccctcgaagagtatatgtca 1351 Query: 1369 aaagtccagatgaggtgcaatttagaactgtaaaagtgtccagtaaaggtccattaggag 1428 | | ||| || ||||||||||| | ||||||||| ||||||| ||||||||||||||||| Sbjct: 1352 agaatccggaagaggtgcaattcaaaactgtaaaggtgtccaataaaggtccattaggag 1411 Query: 1429 aagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctataggag 1488 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1412 aagaatatgcatggtaccagtgcacagtaagtggtgggcgtgacagccgtcctataggag 1471 Query: 1489 catatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaactgca 1548 ||||||||||||| ||||| || ||||||||||| || ||||||||||| || || |||| Sbjct: 1472 catatgaactagccaaagcagttgaagaattgggtgctggagaaatacttcttaattgca 1531 Query: 1549 ttgattgtgatggtcagggtggtggatttgatatagatttgatcaaaatggtgtcggatg 1608 ||||||||||||| ||||| | |||||||| |||||| || | ||||||||||| |||| Sbjct: 1532 ttgattgtgatggccagggctgcggatttgacatagatctggtaaaaatggtgtcagatg 1591 Query: 1609 ctgtgacaattcctgtcattgcaagcagtggtgctggtgccgtggaacatttttctgaag 1668 ||||||| || ||||||||||||||||||||||||||| | || |||||||||||||| | Sbjct: 1592 ctgtgactatccctgtcattgcaagcagtggtgctggtactgtcgaacatttttctgagg 1651 Query: 1669 tctttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagagg 1728 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1652 tctttgagaaaacaaatgcttctgctgcccttgctgctggcattttccatcggaaagagg 1711 Query: 1729 ttcccattctagcagtgaaagagcatctggtagatgctggtgtggaggtcaga 1781 |||| ||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1712 ttccgatttcagcagtgaaagagcatctggtagatgctggcgtggaggtcaga 1764 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1916 gattggaaatgcaatttcggaataaat 1942 ||||||||||||||||||| ||||||| Sbjct: 1866 gattggaaatgcaatttcgtaataaat 1892
>gb|AY109594.1| Zea mays CL287_1 mRNA sequence Length = 2142 Score = 1179 bits (595), Expect = 0.0 Identities = 1078/1244 (86%) Strand = Plus / Plus Query: 192 aacaccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatc 251 ||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 318 aacacggtgactctgctggactacggcgcggggaacgtacgcagcgtgcgcaacgcaatt 377 Query: 252 cgccacctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgac 311 ||| ||||||||||| ||||||||||||||| ||| || ||||||||| ||||||| || Sbjct: 378 cgctacctcggcttcgacatccgcgacgtgcagagcccggaggacatcgtcgccgcggaa 437 Query: 312 cgcctcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtaca 371 || ||||| || ||||| ||||| || ||||| ||||| |||||||| |||||| | || Sbjct: 438 cggctcgtctttcccggtgtcggcgccttcggctccgccatggacgtcctcaacaggacg 497 Query: 372 ggcatggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgc 431 ||||||||| |||| || ||||||||||||| | ||||||||||||||| || |||||| Sbjct: 498 ggcatggccaacgcactccgtgagtacatccaaagggaccgccccttcctaggcatctgc 557 Query: 432 ctcggccttcagctgctattcgattccagcgaggagaatggccctgtaagcggccttggt 491 ||||| || |||||||| |||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 558 ctcggtctccagctgctcttcgattccagcgaggagaacggcccggtgagcggcctcggt 617 Query: 492 gtgatacctggagttgtcaggcgattcgactcttccgagggtctcatagtgcctcacatt 551 |||||||| || || ||||||||||||||||| || | || |||||||| || || ||| Sbjct: 618 gtgataccaggcgtggtcaggcgattcgactcctcaaatggcctcatagttccacatatt 677 Query: 552 ggatggaacgccctccagatcaccaaggacacgcagctgctgcaaggagctgatggccag 611 || |||||||| |||||||||||||||||||| | ||| |||| ||||||||||||||| Sbjct: 678 ggctggaacgctctccagatcaccaaggacacaccactgttgcagggagctgatggccag 737 Query: 612 catgtgtacttcgttcactcctatcacgctctaccttcagatgcgaacaaagactggatt 671 ||||||||||| ||||||||||| | || || ||||||||||| || | | |||||||| Sbjct: 738 catgtgtactttgttcactcctaccgcgtactgccttcagatgctaatagaaactggatt 797 Query: 672 tcgttaacatgtaactacggtgagagtttcatatcatctatctcgatgggcaacattcag 731 || | | ||| ||||| ||||| || || ||||| || ||||| ||||||||||||||| Sbjct: 798 tcctccatatgcaactatggtgacagctttatatcctccatctcaatgggcaacattcag 857 Query: 732 gcagttcaatttcatccagagaagagcggagctactggacttaacatttttgaaaatttt 791 |||||||||||||| ||||| ||||| |||||||| |||||| ||| | || | ||| Sbjct: 858 gcagttcaatttcacccagaaaagagtggagctaccggactttctattctaaaagaattt 917 Query: 792 ctcagtcccaactcttcaggggcaaaggccccagctcgtagaaaagcatcaaaacttgca 851 ||||| || |||||| ||| | |||| |||||| ||||| ||||||||||||||||| Sbjct: 918 ctcagacctaactctcttgggaccaaggtcccagcacgtaggaaagcatcaaaacttgcg 977 Query: 852 aagagagtgatagcctgccttgatgttcggtcaaatgataatggggatcttgtagtaaca 911 |||||||||||||| |||||||||||||| ||||||||||| || |||||||| |||||| Sbjct: 978 aagagagtgatagcatgccttgatgttcgttcaaatgataaaggagatcttgtggtaaca 1037 Query: 912 aaaggtgaccagtatgatgtaagagatcatagtagtagcaaagaggtaagaaaccttggc 971 ||||| || || ||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1038 aaaggcgatcaatatgatgtaagagatcatactagcagcaaagaggtaagaaaccttggc 1097 Query: 972 aagccagtggaattagcaagtcaatactacatagatggggctgatgaggtcagcttcttg 1031 |||||||| || |||||||| || ||||||||||| || ||||||||||||||||||||| Sbjct: 1098 aagccagtcgatttagcaagccagtactacatagacggtgctgatgaggtcagcttcttg 1157 Query: 1032 aatataactggtttccgtgcctttccattgggtgatttgccaatgctagaggtactacgc 1091 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 1158 aatataactggtttccgtgactttccattgggtgatttgccaatgctagaggtactgcgt 1217 Query: 1092 tgcgcatctgaaaaagtttttgtgccacttacagttggtggtggtataagagacttcaca 1151 || || |||||||| | |||||||||||||||||| ||| ||||||||||| Sbjct: 1218 tgtgcctctgaaaaggnnnnngtgccacttacagttggtnnnnncatacgagacttcaca 1277 Query: 1152 gatgaaagtggaagatactattcaagcttggaagtagcatcagaatatttcaggtctggt 1211 |||| || |||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1278 gatgcaaatggaagatactactcaagtttggaggtagcatcagaatatttcaggtccggt 1337 Query: 1212 gctgacaagatttcaattggaagtgatgctgtttttgctgctgaagcctatttacagact 1271 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1338 gctgacaaaatttcaattggaagtgatgctgtttatgctgctgaagccnnnnnacagact 1397 Query: 1272 ggtgtaaagacagggaaaagcagcttggagcaaatttctagagtatatggaaatcaggct 1331 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 1398 ggtgtaaagacagggaaaagcagcttggagcaaatctctagagtatatggcaatcaggct 1457 Query: 1332 gtagttgtaagtattgatcctcggagagtgtatgtcaaaagtccagatgaggtgcaattt 1391 |||||||| |||||||||||||| | || ||||||||||||| ||| || |||| |||| Sbjct: 1458 gtagttgtcagtattgatcctcgacgggtatatgtcaaaagtcaagaagatgtgccattt 1517 Query: 1392 agaactgtaaaagtgtccagtaaaggtccattaggagaagaata 1435 | ||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 1518 aaaactgtaaaggtgtccactaaaggtccatcgggagaagaata 1561 Score = 293 bits (148), Expect = 1e-75 Identities = 243/278 (87%) Strand = Plus / Plus Query: 1503 aaagctgtggaagaattgggcgccggagaaatactactcaactgcattgattgtgatggt 1562 ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 1629 aaagctgtggaagaattgggcgcaggagaaatacttcttaactgcattgattgtgatggc 1688 Query: 1563 cagggtggtggatttgatatagatttgatcaaaatggtgtcggatgctgtgacaattcct 1622 || ||| |||||||||| ||||||||| | |||||||| || |||||||||||||| ||| Sbjct: 1689 caaggttgtggatttgacatagatttggttaaaatggtttctgatgctgtgacaatccct 1748 Query: 1623 gtcattgcaagcagtggtgctggtgccgtggaacatttttctgaagtctttgagaaaaca 1682 |||||||| |||||||||||||| || || |||| ||||| ||||||||| Sbjct: 1749 gtcattgcgagcagtggtgctggagctgttcaacannnnnctgaaannnnngagaaaaca 1808 Query: 1683 aatgcttctgctgcccttgcggctggaattttccatcggaaagaggttcccattctagca 1742 |||||||||||||||||||| ||||| |||||||| |||||||||||||| || |||||| Sbjct: 1809 aatgcttctgctgcccttgctgctggcattttccaccggaaagaggttcctatactagca 1868 Query: 1743 gtgaaagagcatctggtagatgctggtgtggaggtcag 1780 ||||||||||||||||| ||||||||||||||||||| Sbjct: 1869 gtgaaagagcatctggtcaatgctggtgtggaggtcag 1906
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 285 bits (144), Expect = 3e-73 Identities = 246/280 (87%) Strand = Plus / Minus Query: 196 ccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatccgcc 255 ||||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 8229259 ccgtgacgctgctggactacggcgcgggcaacgtgcgcagcgtgcgcaatgccatccgcc 8229200 Query: 256 acctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgaccgcc 315 ||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 8229199 acctcggcttcggcatccgcgacgtgcgcagcccggaggacatcctcgccgccgaccgcc 8229140 Query: 316 tcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtacaggca 375 |||| ||||| || ||||| || ||||| || || |||||||| |||| ||| | || | Sbjct: 8229139 tcgtcttcccgggggtcggcgccttcggctcagccatggacgtcctcacccgctccggga 8229080 Query: 376 tggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgcctcg 435 ||||||||||||| || ||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 8229079 tggccgacgcgctccgcgagtacatccgcagggaccgccccttcctcggcatctgcctcg 8229020 Query: 436 gccttcagctgctattcgattccagcgaggagaatggccc 475 |||| ||||| || ||||| || ||||||||||||||||| Sbjct: 8229019 gcctccagcttctcttcgactctagcgaggagaatggccc 8228980 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Minus Query: 196 ccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatccgcc 255 ||||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 30890510 ccgtgacgctgctggactacggcgcgggcaacgtgcgcagcgtgcggaacgccatccgcc 30890451 Query: 256 acctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgaccgcc 315 |||| ||||||| |||| | |||||||| || || ||||||||||||||||||||||||| Sbjct: 30890450 accttggcttcagcatctgtgacgtgcgtagcccggaggacatcctcgccgccgaccgcc 30890391 Query: 316 tcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtacaggca 375 |||| ||||| || ||| || ||| | || || |||||||| |||| ||| | || | Sbjct: 30890390 tcgtcttcccagggtccggcgccttcagctctgccatggacgtcctcacccgctccggga 30890331 Query: 376 tggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgcctcg 435 ||||| ||||||| || ||||||||||| | |||| |||||||||| || |||||||||| Sbjct: 30890330 tggccaacgcgctccgcgagtacatccgtagggactgccccttcctcggcatctgcctcg 30890271 Query: 436 gccttcagctgctattcgattccagcgaggagaatggccct 476 |||| |||||||| ||||| || |||||||||||||||||| Sbjct: 30890270 gcctccagctgctcttcgactctagcgaggagaatggccct 30890230 Score = 210 bits (106), Expect = 1e-50 Identities = 145/158 (91%) Strand = Plus / Minus Query: 1572 ggatttgatatagatttgatcaaaatggtgtcggatgctgtgacaattcctgtcattgca 1631 |||||||| |||||| || | ||||||||||| ||||||||||| || |||||||||||| Sbjct: 8224993 ggatttgacatagatctggtaaaaatggtgtcagatgctgtgactatccctgtcattgca 8224934 Query: 1632 agcagtggtgctggtgccgtggaacatttttctgaagtctttgagaaaacaaatgcttct 1691 ||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||| Sbjct: 8224933 agcagtggtgctggtactgtcgaacatttttctgaggtctttgagaaaacaaatgcttct 8224874 Query: 1692 gctgcccttgcggctggaattttccatcggaaagaggt 1729 ||||||||||| ||||| |||||||||||||||||||| Sbjct: 8224873 gctgcccttgctgctggcattttccatcggaaagaggt 8224836 Score = 188 bits (95), Expect = 5e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 477 gtaagcggccttggtgtgatacctggagttgtcaggcgattcgactcttccgagggtctc 536 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 8228811 gtaagcggccttggtgtgatacctggagttgtcaggcgatttgactcttcgaagggtctc 8228752 Query: 537 atagtgcctcacattggatggaacgccctccagatcaccaaggacacgcagctgctgcaa 596 || |||||||||||||| ||||| || | |||||||||| |||||||||||||| | Sbjct: 8228751 attgtgcctcacattggctggaatgctttggagatcaccaaagacacgcagctgctcaag 8228692 Query: 597 ggagctgatggccagcatgtgtacttcgttcactcctatcacgctct 643 |||||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 8228691 ggagctgaaggccaccatgtgtactttgttcactcctatcatgctct 8228645 Score = 163 bits (82), Expect = 3e-36 Identities = 106/114 (92%) Strand = Plus / Minus Query: 1164 agatactattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatt 1223 |||||||| ||||| ||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 8226920 agatactactcaagtttggaagtagcgtcagagtacttcaggtctggtgctgacaagatt 8226861 Query: 1224 tcaattggaagtgatgctgtttttgctgctgaagcctatttacagactggtgta 1277 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 8226860 tcaattggtagtgatgccgtttttgctgctgaagcctatttgcagactggtgta 8226807 Score = 155 bits (78), Expect = 7e-34 Identities = 87/90 (96%) Strand = Plus / Minus Query: 870 cttgatgttcggtcaaatgataatggggatcttgtagtaacaaaaggtgaccagtatgat 929 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 8227965 cttgatgttcggtcaaatgatagtggggatcttgtggtaacaaaaggtgaccagtatgat 8227906 Query: 930 gtaagagatcatagtagtagcaaagaggta 959 |||||||| ||||||||||||||||||||| Sbjct: 8227905 gtaagagaccatagtagtagcaaagaggta 8227876 Score = 135 bits (68), Expect = 7e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 1455 gtaagtggtgggcgtgatagccgacctataggagcatatgaactagcaaaagctgtggaa 1514 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 8225771 gtaagtggtgggcgtgacagccgtcctataggagcatatgaactagccaaagcagttgaa 8225712 Query: 1515 gaattgggcgccggagaaatactactcaactgcattgattgtgatggt 1562 |||||||| || ||||||||||| || || |||||||||||||||||| Sbjct: 8225711 gaattgggtgctggagaaatacttcttaattgcattgattgtgatggt 8225664 Score = 101 bits (51), Expect = 9e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 1081 aggtactacgctgcgcatctgaaaaagtttttgtgccacttacagttggtggtggtataa 1140 ||||| |||| || |||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 8227364 aggtattacgttgtgcatctgagaaagtatttgtgccacttacagttggtggaggtataa 8227305 Query: 1141 gagacttcacagatg 1155 ||||||||||||||| Sbjct: 8227304 gagacttcacagatg 8227290 Score = 101 bits (51), Expect = 9e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 1018 aggtcagcttcttgaatataactggtttccgtgcctttccattgggtgatttgccaatgc 1077 |||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 8227508 aggttagcttcttgaatataactggtttccgtgactttccgttgggagatttgccaatgc 8227449 Query: 1078 tagaggt 1084 ||||||| Sbjct: 8227448 tagaggt 8227442 Score = 101 bits (51), Expect = 9e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 684 aactacggtgagagtttcatatcatctatctcgatgggcaacattcaggcagttcaattt 743 ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 8228522 aactatggcgagagtttcatatcatccatctcaatgggcaacattcaggcagttcagttt 8228463 Query: 744 catccagagaagagcggag 762 || ||||| |||||||||| Sbjct: 8228462 cacccagaaaagagcggag 8228444 Score = 89.7 bits (45), Expect = 4e-14 Identities = 45/45 (100%) Strand = Plus / Minus Query: 1415 aggtccattaggagaagaatatgcatggtaccagtgcacagtaag 1459 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8226107 aggtccattaggagaagaatatgcatggtaccagtgcacagtaag 8226063 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 955 aggtaagaaaccttggcaagccagtggaattagcaagtcaatactacatagatggggctg 1014 ||||||||||||| || ||||||||||| |||||||| || |||||||||||||| |||| Sbjct: 8227649 aggtaagaaacctcgggaagccagtggatttagcaagccagtactacatagatggtgctg 8227590 Query: 1015 atgaggt 1021 ||||||| Sbjct: 8227589 atgaggt 8227583 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1726 aggttcccattctagcagtgaaagagcatctggtagatgctggtgtggaggtcaga 1781 ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 8224555 aggttccgatttcagcagtgaaagagcatctggtagatgctggcgtggaggtcaga 8224500 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 1335 gttgtaagtattgatcctcggagagtgtatgtcaaaagtccagatgaggtgcaatttaga 1394 |||||||||||||| ||||| ||||| |||||||| | ||| || ||||||||||| | | Sbjct: 8226258 gttgtaagtattgaccctcgaagagtatatgtcaagaatccggaagaggtgcaattcaaa 8226199 Query: 1395 actgtaaaagtgtccagtaaaggt 1418 |||||||| ||||||| ||||||| Sbjct: 8226198 actgtaaaggtgtccaataaaggt 8226175 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1275 gtaaagacagggaaaagcagcttggagcaaatttctagagtatatgg 1321 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 8226741 gtaaagacaggaaaaagcagcttggagcaaatctctagagtatatgg 8226695 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1916 gattggaaatgcaatttcggaataaat 1942 ||||||||||||||||||| ||||||| Sbjct: 8224398 gattggaaatgcaatttcgtaataaat 8224372 Score = 46.1 bits (23), Expect = 0.49 Identities = 35/39 (89%) Strand = Plus / Minus Query: 821 cccagctcgtagaaaagcatcaaaacttgcaaagagagt 859 |||| ||||||| |||||||| || |||||||||||||| Sbjct: 8228092 cccatctcgtaggaaagcatcgaaccttgcaaagagagt 8228054
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 285 bits (144), Expect = 3e-73 Identities = 246/280 (87%) Strand = Plus / Minus Query: 196 ccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatccgcc 255 ||||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 162854 ccgtgacgctgctggactacggcgcgggcaacgtgcgcagcgtgcgcaatgccatccgcc 162795 Query: 256 acctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgaccgcc 315 ||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 162794 acctcggcttcggcatccgcgacgtgcgcagcccggaggacatcctcgccgccgaccgcc 162735 Query: 316 tcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtacaggca 375 |||| ||||| || ||||| || ||||| || || |||||||| |||| ||| | || | Sbjct: 162734 tcgtcttcccgggggtcggcgccttcggctcagccatggacgtcctcacccgctccggga 162675 Query: 376 tggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgcctcg 435 ||||||||||||| || ||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 162674 tggccgacgcgctccgcgagtacatccgcagggaccgccccttcctcggcatctgcctcg 162615 Query: 436 gccttcagctgctattcgattccagcgaggagaatggccc 475 |||| ||||| || ||||| || ||||||||||||||||| Sbjct: 162614 gcctccagcttctcttcgactctagcgaggagaatggccc 162575 Score = 210 bits (106), Expect = 1e-50 Identities = 145/158 (91%) Strand = Plus / Minus Query: 1572 ggatttgatatagatttgatcaaaatggtgtcggatgctgtgacaattcctgtcattgca 1631 |||||||| |||||| || | ||||||||||| ||||||||||| || |||||||||||| Sbjct: 158588 ggatttgacatagatctggtaaaaatggtgtcagatgctgtgactatccctgtcattgca 158529 Query: 1632 agcagtggtgctggtgccgtggaacatttttctgaagtctttgagaaaacaaatgcttct 1691 ||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||| Sbjct: 158528 agcagtggtgctggtactgtcgaacatttttctgaggtctttgagaaaacaaatgcttct 158469 Query: 1692 gctgcccttgcggctggaattttccatcggaaagaggt 1729 ||||||||||| ||||| |||||||||||||||||||| Sbjct: 158468 gctgcccttgctgctggcattttccatcggaaagaggt 158431 Score = 188 bits (95), Expect = 5e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 477 gtaagcggccttggtgtgatacctggagttgtcaggcgattcgactcttccgagggtctc 536 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 162406 gtaagcggccttggtgtgatacctggagttgtcaggcgatttgactcttcgaagggtctc 162347 Query: 537 atagtgcctcacattggatggaacgccctccagatcaccaaggacacgcagctgctgcaa 596 || |||||||||||||| ||||| || | |||||||||| |||||||||||||| | Sbjct: 162346 attgtgcctcacattggctggaatgctttggagatcaccaaagacacgcagctgctcaag 162287 Query: 597 ggagctgatggccagcatgtgtacttcgttcactcctatcacgctct 643 |||||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 162286 ggagctgaaggccaccatgtgtactttgttcactcctatcatgctct 162240 Score = 163 bits (82), Expect = 3e-36 Identities = 106/114 (92%) Strand = Plus / Minus Query: 1164 agatactattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatt 1223 |||||||| ||||| ||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 160515 agatactactcaagtttggaagtagcgtcagagtacttcaggtctggtgctgacaagatt 160456 Query: 1224 tcaattggaagtgatgctgtttttgctgctgaagcctatttacagactggtgta 1277 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 160455 tcaattggtagtgatgccgtttttgctgctgaagcctatttgcagactggtgta 160402 Score = 155 bits (78), Expect = 7e-34 Identities = 87/90 (96%) Strand = Plus / Minus Query: 870 cttgatgttcggtcaaatgataatggggatcttgtagtaacaaaaggtgaccagtatgat 929 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 161560 cttgatgttcggtcaaatgatagtggggatcttgtggtaacaaaaggtgaccagtatgat 161501 Query: 930 gtaagagatcatagtagtagcaaagaggta 959 |||||||| ||||||||||||||||||||| Sbjct: 161500 gtaagagaccatagtagtagcaaagaggta 161471 Score = 135 bits (68), Expect = 7e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 1455 gtaagtggtgggcgtgatagccgacctataggagcatatgaactagcaaaagctgtggaa 1514 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 159366 gtaagtggtgggcgtgacagccgtcctataggagcatatgaactagccaaagcagttgaa 159307 Query: 1515 gaattgggcgccggagaaatactactcaactgcattgattgtgatggt 1562 |||||||| || ||||||||||| || || |||||||||||||||||| Sbjct: 159306 gaattgggtgctggagaaatacttcttaattgcattgattgtgatggt 159259 Score = 101 bits (51), Expect = 9e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 1081 aggtactacgctgcgcatctgaaaaagtttttgtgccacttacagttggtggtggtataa 1140 ||||| |||| || |||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 160959 aggtattacgttgtgcatctgagaaagtatttgtgccacttacagttggtggaggtataa 160900 Query: 1141 gagacttcacagatg 1155 ||||||||||||||| Sbjct: 160899 gagacttcacagatg 160885 Score = 101 bits (51), Expect = 9e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 1018 aggtcagcttcttgaatataactggtttccgtgcctttccattgggtgatttgccaatgc 1077 |||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 161103 aggttagcttcttgaatataactggtttccgtgactttccgttgggagatttgccaatgc 161044 Query: 1078 tagaggt 1084 ||||||| Sbjct: 161043 tagaggt 161037 Score = 101 bits (51), Expect = 9e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 684 aactacggtgagagtttcatatcatctatctcgatgggcaacattcaggcagttcaattt 743 ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 162117 aactatggcgagagtttcatatcatccatctcaatgggcaacattcaggcagttcagttt 162058 Query: 744 catccagagaagagcggag 762 || ||||| |||||||||| Sbjct: 162057 cacccagaaaagagcggag 162039 Score = 89.7 bits (45), Expect = 4e-14 Identities = 45/45 (100%) Strand = Plus / Minus Query: 1415 aggtccattaggagaagaatatgcatggtaccagtgcacagtaag 1459 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159702 aggtccattaggagaagaatatgcatggtaccagtgcacagtaag 159658 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 955 aggtaagaaaccttggcaagccagtggaattagcaagtcaatactacatagatggggctg 1014 ||||||||||||| || ||||||||||| |||||||| || |||||||||||||| |||| Sbjct: 161244 aggtaagaaacctcgggaagccagtggatttagcaagccagtactacatagatggtgctg 161185 Query: 1015 atgaggt 1021 ||||||| Sbjct: 161184 atgaggt 161178 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1726 aggttcccattctagcagtgaaagagcatctggtagatgctggtgtggaggtcaga 1781 ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 158150 aggttccgatttcagcagtgaaagagcatctggtagatgctggcgtggaggtcaga 158095 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 1335 gttgtaagtattgatcctcggagagtgtatgtcaaaagtccagatgaggtgcaatttaga 1394 |||||||||||||| ||||| ||||| |||||||| | ||| || ||||||||||| | | Sbjct: 159853 gttgtaagtattgaccctcgaagagtatatgtcaagaatccggaagaggtgcaattcaaa 159794 Query: 1395 actgtaaaagtgtccagtaaaggt 1418 |||||||| ||||||| ||||||| Sbjct: 159793 actgtaaaggtgtccaataaaggt 159770 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1275 gtaaagacagggaaaagcagcttggagcaaatttctagagtatatgg 1321 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 160336 gtaaagacaggaaaaagcagcttggagcaaatctctagagtatatgg 160290 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1916 gattggaaatgcaatttcggaataaat 1942 ||||||||||||||||||| ||||||| Sbjct: 157993 gattggaaatgcaatttcgtaataaat 157967 Score = 46.1 bits (23), Expect = 0.49 Identities = 35/39 (89%) Strand = Plus / Minus Query: 821 cccagctcgtagaaaagcatcaaaacttgcaaagagagt 859 |||| ||||||| |||||||| || |||||||||||||| Sbjct: 161687 cccatctcgtaggaaagcatcgaaccttgcaaagagagt 161649
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Plus Query: 196 ccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatccgcc 255 ||||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 4696 ccgtgacgctgctggactacggcgcgggcaacgtgcgcagcgtgcggaacgccatccgcc 4755 Query: 256 acctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgaccgcc 315 |||| ||||||| |||| | |||||||| || || ||||||||||||||||||||||||| Sbjct: 4756 accttggcttcagcatctgtgacgtgcgtagcccggaggacatcctcgccgccgaccgcc 4815 Query: 316 tcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtacaggca 375 |||| ||||| || ||| || ||| | || || |||||||| |||| ||| | || | Sbjct: 4816 tcgtcttcccagggtccggcgccttcagctctgccatggacgtcctcacccgctccggga 4875 Query: 376 tggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgcctcg 435 ||||| ||||||| || ||||||||||| | |||| |||||||||| || |||||||||| Sbjct: 4876 tggccaacgcgctccgcgagtacatccgtagggactgccccttcctcggcatctgcctcg 4935 Query: 436 gccttcagctgctattcgattccagcgaggagaatggccct 476 |||| |||||||| ||||| || |||||||||||||||||| Sbjct: 4936 gcctccagctgctcttcgactctagcgaggagaatggccct 4976
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Minus Query: 196 ccgtgactttgctggactacggcgcgggcaacgtccgcagcgtgcgcaacgcaatccgcc 255 ||||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 107788 ccgtgacgctgctggactacggcgcgggcaacgtgcgcagcgtgcggaacgccatccgcc 107729 Query: 256 acctcggcttcaacatccgcgacgtgcggagtcccgaggacatcctcgccgccgaccgcc 315 |||| ||||||| |||| | |||||||| || || ||||||||||||||||||||||||| Sbjct: 107728 accttggcttcagcatctgtgacgtgcgtagcccggaggacatcctcgccgccgaccgcc 107669 Query: 316 tcgtattccccggagtcggagctttcggttccgctatggacgttctcaaccgtacaggca 375 |||| ||||| || ||| || ||| | || || |||||||| |||| ||| | || | Sbjct: 107668 tcgtcttcccagggtccggcgccttcagctctgccatggacgtcctcacccgctccggga 107609 Query: 376 tggccgacgcgcttcgtgagtacatccgcatggaccgccccttcctgggtatctgcctcg 435 ||||| ||||||| || ||||||||||| | |||| |||||||||| || |||||||||| Sbjct: 107608 tggccaacgcgctccgcgagtacatccgtagggactgccccttcctcggcatctgcctcg 107549 Query: 436 gccttcagctgctattcgattccagcgaggagaatggccct 476 |||| |||||||| ||||| || |||||||||||||||||| Sbjct: 107548 gcctccagctgctcttcgactctagcgaggagaatggccct 107508
>dbj|AB006210.1| Arabidopsis thaliana mRNA for glutamine amidotransferase/cyclase, complete cds Length = 1994 Score = 101 bits (51), Expect = 9e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 1110 tttgtgccacttacagttggtggtggtataagagacttcacagatgaaagtggaagatac 1169 ||||| ||||| || ||||| |||||||| |||||||| ||||||| ||||| || ||| Sbjct: 1107 tttgtaccactaactgttggaggtggtattagagactttacagatgctagtggcaggtac 1166 Query: 1170 tattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttcaatt 1229 ||||| ||||||||||| || | || |||||||| || |||||||| ||||| || || Sbjct: 1167 tattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatgtccata 1226 Query: 1230 ggaagtgatgctgtttttgctgc 1252 |||||||| |||||||||||||| Sbjct: 1227 ggaagtgacgctgtttttgctgc 1249 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1311 agagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| |||||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1308 agagtttatggaaatcaggcagtggttgtaagtattgatcctcgtagagtttatgt 1363 Score = 71.9 bits (36), Expect = 8e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctata 1484 |||||||||||||| ||||| |||||||| || ||||| || | || | |||||||| Sbjct: 1422 ggagaagaatatgcctggtatcagtgcacggtcagtggaggacaagaaggtcgacctatt 1481 Query: 1485 ggagcatatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaac 1544 ||||||| ||| || || ||||| || |||||||| || ||||| ||||||||| | ||| Sbjct: 1482 ggagcatttgagcttgcgaaagcggttgaagaattaggtgccggtgaaatactattgaac 1541 Query: 1545 tgcattgattgtgatggtca 1564 ||||| | ||||||||||| Sbjct: 1542 tgcataaactgtgatggtca 1561 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 840 tcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggggat 899 ||||||||||||||||| ||||| || || |||||||| || | |||||||| || ||| Sbjct: 837 tcaaaacttgcaaagagggtgattgcttgtcttgatgtgaggacgaatgataaaggagat 896 Query: 900 cttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| || ||||| || ||||||||||| ||||| Sbjct: 897 ctcgtagttactaaaggggatcagtatgatgtgagaga 934
>ref|NM_118824.2| Arabidopsis thaliana AT-HF (AT-HF) mRNA, complete cds Length = 2514 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 1110 tttgtgccacttacagttggtggtggtataagagacttcacagatgaaagtggaagatac 1169 ||||| ||||| || ||||| |||||||| |||||||| ||||||| ||||| || ||| Sbjct: 1134 tttgtaccactaactgttggaggtggtattagagactttacagatgctagtggcaggtac 1193 Query: 1170 tattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttcaatt 1229 ||||| ||||||||||| || | || |||||||| || |||||||| ||||| || || Sbjct: 1194 tattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctccata 1253 Query: 1230 ggaagtgatgctgtttttgctgc 1252 |||||||| ||||||| |||||| Sbjct: 1254 ggaagtgacgctgtttctgctgc 1276 Score = 87.7 bits (44), Expect = 1e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctata 1484 |||||||||||||| ||||| |||||||| || ||||| || || || | |||||||| Sbjct: 1449 ggagaagaatatgcctggtatcagtgcacggtcagtggaggacgagaaggtcgacctatt 1508 Query: 1485 ggagcatatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaac 1544 ||||||| ||| || || ||||| || |||||||| || ||||| ||||||||| | ||| Sbjct: 1509 ggagcatttgagcttgcgaaagcggttgaagaattaggtgccggtgaaatactattgaac 1568 Query: 1545 tgcattgattgtgatggtca 1564 ||||| || ||||||||||| Sbjct: 1569 tgcatagactgtgatggtca 1588 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1311 agagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| |||||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1335 agagtttatggaaatcaggcagtggttgtaagtattgatcctcgtagagtttatgt 1390 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 840 tcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggggat 899 ||||||||||||||||| ||||| || || |||||||| || | |||||||| || ||| Sbjct: 864 tcaaaacttgcaaagagggtgattgcttgtcttgatgtgaggacgaatgataaaggagat 923 Query: 900 cttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| || ||||| || ||||||||||| ||||| Sbjct: 924 ctcgtagttactaaaggggatcagtatgatgtgagaga 961 Score = 46.1 bits (23), Expect = 0.49 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggtt 1730 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 1695 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggta 1754 Query: 1731 cccattctagcagtgaaagagca 1753 || || | | | ||||||||||| Sbjct: 1755 ccaatccaatctgtgaaagagca 1777
>gb|BT005923.1| Arabidopsis thaliana At4g26900 gene, complete cds Length = 1779 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 1110 tttgtgccacttacagttggtggtggtataagagacttcacagatgaaagtggaagatac 1169 ||||| ||||| || ||||| |||||||| |||||||| ||||||| ||||| || ||| Sbjct: 1102 tttgtaccactaactgttggaggtggtattagagactttacagatgctagtggcaggtac 1161 Query: 1170 tattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttcaatt 1229 ||||| ||||||||||| || | || |||||||| || |||||||| ||||| || || Sbjct: 1162 tattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctccata 1221 Query: 1230 ggaagtgatgctgtttttgctgc 1252 |||||||| ||||||| |||||| Sbjct: 1222 ggaagtgacgctgtttctgctgc 1244 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctata 1484 |||||||||||||| |||| |||||||| || ||||| || || || | |||||||| Sbjct: 1417 ggagaagaatatgcccggtatcagtgcacggtcagtggaggacgagaaggtcgacctatt 1476 Query: 1485 ggagcatatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaac 1544 ||||||| ||| || || ||||| || |||||||| || ||||| ||||||||| | ||| Sbjct: 1477 ggagcatttgagcttgcgaaagcggttgaagaattaggtgccggtgaaatactattgaac 1536 Query: 1545 tgcattgattgtgatggtca 1564 ||||| || ||||||||||| Sbjct: 1537 tgcatagactgtgatggtca 1556 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1311 agagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| |||||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1303 agagtttatggaaatcaggcagtggttgtaagtattgatcctcgtagagtttatgt 1358 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 840 tcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggggat 899 ||||||||||||||||| ||||| || || |||||||| || | |||||||| || ||| Sbjct: 832 tcaaaacttgcaaagagggtgattgcttgtcttgatgtgaggacgaatgataaaggagat 891 Query: 900 cttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| || ||||| || ||||||||||| ||||| Sbjct: 892 ctcgtagttactaaaggggatcagtatgatgtgagaga 929 Score = 46.1 bits (23), Expect = 0.49 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggtt 1730 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 1663 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggta 1722 Query: 1731 cccattctagcagtgaaagagca 1753 || || | | | ||||||||||| Sbjct: 1723 ccaatccaatctgtgaaagagca 1745
>dbj|AK118498.1| Arabidopsis thaliana At4g26900 mRNA for putative glutamine amidotransferase/cyclase, complete cds, clone: RAFL19-73-E07 Length = 1996 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 1110 tttgtgccacttacagttggtggtggtataagagacttcacagatgaaagtggaagatac 1169 ||||| ||||| || ||||| |||||||| |||||||| ||||||| ||||| || ||| Sbjct: 1134 tttgtaccactaactgttggaggtggtattagagactttacagatgctagtggcaggtac 1193 Query: 1170 tattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttcaatt 1229 ||||| ||||||||||| || | || |||||||| || |||||||| ||||| || || Sbjct: 1194 tattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctccata 1253 Query: 1230 ggaagtgatgctgtttttgctgc 1252 |||||||| ||||||| |||||| Sbjct: 1254 ggaagtgacgctgtttctgctgc 1276 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctata 1484 |||||||||||||| |||| |||||||| || ||||| || || || | |||||||| Sbjct: 1449 ggagaagaatatgcccggtatcagtgcacggtcagtggaggacgagaaggtcgacctatt 1508 Query: 1485 ggagcatatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaac 1544 ||||||| ||| || || ||||| || |||||||| || ||||| ||||||||| | ||| Sbjct: 1509 ggagcatttgagcttgcgaaagcggttgaagaattaggtgccggtgaaatactattgaac 1568 Query: 1545 tgcattgattgtgatggtca 1564 ||||| || ||||||||||| Sbjct: 1569 tgcatagactgtgatggtca 1588 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1311 agagtatatggaaatcaggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| |||||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1335 agagtttatggaaatcaggcagtggttgtaagtattgatcctcgtagagtttatgt 1390 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 840 tcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggggat 899 ||||||||||||||||| ||||| || || |||||||| || | |||||||| || ||| Sbjct: 864 tcaaaacttgcaaagagggtgattgcttgtcttgatgtgaggacgaatgataaaggagat 923 Query: 900 cttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| || ||||| || ||||||||||| ||||| Sbjct: 924 ctcgtagttactaaaggggatcagtatgatgtgagaga 961 Score = 46.1 bits (23), Expect = 0.49 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggtt 1730 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 1695 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggta 1754 Query: 1731 cccattctagcagtgaaagagca 1753 || || | | | ||||||||||| Sbjct: 1755 ccaatccaatctgtgaaagagca 1777
>emb|BX829357.1|CNS0A4LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1215 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 1110 tttgtgccacttacagttggtggtggtataagagacttcacagatgaaagtggaagatac 1169 ||||| ||||| || ||||| |||||||| |||||||| ||||||| ||||| || ||| Sbjct: 280 tttgtaccactaactgttggaggtggtattagagactttacagatgctagtggcaggtac 339 Query: 1170 tattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttcaatt 1229 ||||| ||||||||||| || | || |||||||| || |||||||| ||||| || || Sbjct: 340 tattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctccata 399 Query: 1230 ggaagtgatgctgtttttgctgc 1252 |||||||| ||||||| |||||| Sbjct: 400 ggaagtgacgctgtttctgctgc 422 Score = 87.7 bits (44), Expect = 1e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaagtggtgggcgtgatagccgacctata 1484 |||||||||||||| ||||| |||||||| || ||||| || || || | |||||||| Sbjct: 607 ggagaagaatatgcctggtatcagtgcacggtcagtggaggacgagaaggtcgacctatt 666 Query: 1485 ggagcatatgaactagcaaaagctgtggaagaattgggcgccggagaaatactactcaac 1544 ||||||| ||| || || ||||| || |||||||| || ||||| ||||||||| | ||| Sbjct: 667 ggagcatttgagcttgcgaaagcggttgaagaattaggtgccggtgaaatactattgaac 726 Query: 1545 tgcattgattgtgatggtca 1564 ||||| || ||||||||||| Sbjct: 727 tgcatagactgtgatggtca 746 Score = 67.9 bits (34), Expect = 1e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 840 tcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggggat 899 ||||||||||||||||| ||||| || || |||||||| || | |||||||| || ||| Sbjct: 10 tcaaaacttgcaaagagggtgattgcttgtcttgatgtgaggacgaatgataaaggagat 69 Query: 900 cttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| || ||||| || ||||||||||| ||||| Sbjct: 70 ctcgtagttactaaaggggatcagtatgatgtgagaga 107 Score = 48.1 bits (24), Expect = 0.12 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1335 gttgtaagtattgatcctcggagagtgtatgt 1366 |||||||||||||||||||| ||||| ||||| Sbjct: 517 gttgtaagtattgatcctcgtagagtttatgt 548 Score = 46.1 bits (23), Expect = 0.49 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggtt 1730 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 853 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggta 912 Query: 1731 cccattctagcagtgaaagagca 1753 || || | | | ||||||||||| Sbjct: 913 ccaatccaatctgtgaaagagca 935
>dbj|AB016783.1| Arabidopsis thaliana gene for glutamine amidotransferase/cyclase, partial cds Length = 4581 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1167 tactattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttca 1226 |||||||| ||||||||||| || | || |||||||| || |||||||| ||||| || Sbjct: 4339 tactattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatgtcc 4398 Query: 1227 attggaagtgatgctgtttttgctgc 1252 || |||||||| |||||||||||||| Sbjct: 4399 ataggaagtgacgctgtttttgctgc 4424 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 885 aatgataatggggatcttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 |||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 3548 aatgataaaggagatctcgtagttactaaaggggatcagtatgatgtgagaga 3600
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 1167 tactattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttca 1226 |||||||| ||||||||||| || | || |||||||| || |||||||| ||||| || Sbjct: 21831 tactattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctcc 21890 Query: 1227 attggaagtgatgctgtttttgctgc 1252 || |||||||| ||||||| |||||| Sbjct: 21891 ataggaagtgacgctgtttctgctgc 21916 Score = 50.1 bits (25), Expect = 0.031 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1326 caggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 22310 caggcagtggttgtaagtattgatcctcgtagagtttatgt 22350 Score = 46.1 bits (23), Expect = 0.49 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggt 1729 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 23271 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggt 23329 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaa 1458 |||||||||||||| ||||| |||||||| |||| Sbjct: 22748 ggagaagaatatgcctggtatcagtgcacggtaa 22781 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 885 aatgataatggggatcttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 |||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 21040 aatgataaaggagatctcgtagttactaaaggggatcagtatgatgtgagaga 21092
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 1167 tactattcaagcttggaagtagcatcagaatatttcaggtctggtgctgacaagatttca 1226 |||||||| ||||||||||| || | || |||||||| || |||||||| ||||| || Sbjct: 65988 tactattctagcttggaagttgctgctgagtatttcagatccggtgctgataagatctcc 66047 Query: 1227 attggaagtgatgctgtttttgctgc 1252 || |||||||| ||||||| |||||| Sbjct: 66048 ataggaagtgacgctgtttctgctgc 66073 Score = 50.1 bits (25), Expect = 0.031 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1326 caggctgtagttgtaagtattgatcctcggagagtgtatgt 1366 ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 66467 caggcagtggttgtaagtattgatcctcgtagagtttatgt 66507 Score = 46.1 bits (23), Expect = 0.49 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1671 tttgagaaaacaaatgcttctgctgcccttgcggctggaattttccatcggaaagaggt 1729 |||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 67428 tttgagaagacaaacgcatctgccgcgcttgctgccggcattttccaccggaaagaggt 67486 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1425 ggagaagaatatgcatggtaccagtgcacagtaa 1458 |||||||||||||| ||||| |||||||| |||| Sbjct: 66905 ggagaagaatatgcctggtatcagtgcacggtaa 66938 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 885 aatgataatggggatcttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 |||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 65197 aatgataaaggagatctcgtagttactaaaggggatcagtatgatgtgagaga 65249
>gb|AY570532.1| Alyssum lesbiacum imidazole glycerol-phosphate synthase (IGPS) mRNA, partial cds Length = 555 Score = 58.0 bits (29), Expect = 1e-04 Identities = 83/101 (82%) Strand = Plus / Plus Query: 837 gcatcaaaacttgcaaagagagtgatagcctgccttgatgttcggtcaaatgataatggg 896 |||||||| ||||||||||| ||||| || || |||||||| || |||||||| || Sbjct: 278 gcatcaaagcttgcaaagagggtgattgcttgtcttgatgtgaggagtaatgataaagga 337 Query: 897 gatcttgtagtaacaaaaggtgaccagtatgatgtaagaga 937 || ||||| ||||| ||||| ||||| |||||||| ||||| Sbjct: 338 gaccttgtggtaactaaaggggaccaatatgatgtgagaga 378
>gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence Length = 200890 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1656 catttttctgaagtctttgagaaa 1679 |||||||||||||||||||||||| Sbjct: 180146 catttttctgaagtctttgagaaa 180123
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Minus Query: 864 gcctgccttgatgttcggtcaaatgataatggggatcttgtagtaacaaaaggtgaccag 923 |||||||||||||| || || |||||||| || |||||||| || || || || || ||| Sbjct: 2488771 gcctgccttgatgtacgctccaatgataacggtgatcttgttgtgaccaagggcgatcag 2488712 Query: 924 tatgatgt 931 |||||||| Sbjct: 2488711 tatgatgt 2488704
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Plus Query: 420 ctgggtatctgcctcggccttcagctgctattcga 454 |||||||||||||||||||| ||||| || ||||| Sbjct: 207018 ctgggtatctgcctcggcctccagcttctcttcga 207052
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 738 caatttcatccagagaagagcgg 760 ||||||||||||||||||||||| Sbjct: 581559 caatttcatccagagaagagcgg 581537
>gb|BC124957.1| Xenopus laevis cDNA clone MGC:154765 IMAGE:6635528, complete cds Length = 3010 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1317 tatggaaatcaggctgtagttgtaag 1342 |||||||||||||||| ||||||||| Sbjct: 1519 tatggaaatcaggctggagttgtaag 1544
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 763 ctactggacttaacatttttgaaaat 788 ||||||||||||||||| |||||||| Sbjct: 1350760 ctactggacttaacattattgaaaat 1350785
>gb|AC122307.4| Mus musculus BAC clone RP23-287C21 from 12, complete sequence Length = 194202 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1578 gatatagatttgatcaaaatggtgtc 1603 |||||| ||||||||||||||||||| Sbjct: 91919 gatatatatttgatcaaaatggtgtc 91944
>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence Length = 221768 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1760 agatgctggtgtggaggtcaga 1781 |||||||||||||||||||||| Sbjct: 184511 agatgctggtgtggaggtcaga 184490
>emb|AL359541.11| Human DNA sequence from clone RP11-474I16 on chromosome 1 Contains three novel genes, the FCGR2B gene for Fc fragment of IgG low affinity IIb receptor for (CD32), a ribosomal protein L31 (RPL31) pseudogene, the gene for Fc receptor homolog expressed in B cells (FREB), the gene for a novel protein (FLJ31052), the DUSP12 gene for dual specificity phosphatase 12, the 5' end of the ATF6 gene for activating transcription factor 6 and a CpG island, complete sequence Length = 158641 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1289 aagcagcttggagcaaatttctagag 1314 ||||||||||||| |||||||||||| Sbjct: 58329 aagcagcttggagaaaatttctagag 58354
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 ccccttcctgggtatctgcctcggc 437 ||||| ||||||||||||||||||| Sbjct: 882382 cccctacctgggtatctgcctcggc 882406
>emb|CR855103.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0718E12, complete sequence Length = 90431 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ggaaattttctatcgaatgtt 1858 ||||||||||||||||||||| Sbjct: 66709 ggaaattttctatcgaatgtt 66689 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ggaaattttctatcgaatgtt 1858 ||||||||||||||||||||| Sbjct: 80918 ggaaattttctatcgaatgtt 80898
>gb|AC145241.3| Gorilla gorilla gorilla clone CH255-245G7, complete sequence Length = 169400 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 127166 catttttcttaagtctttgagaaaa 127190
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1739 agcagtgaaagagcatctggtagat 1763 ||||||||||||||||||| ||||| Sbjct: 14389805 agcagtgaaagagcatctgctagat 14389829
>gb|AC186034.3| Pan troglodytes BAC clone CH251-711F4 from chromosome 4, complete sequence Length = 171620 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1401 aaagtgtccagtaaaggtcca 1421 ||||||||||||||||||||| Sbjct: 57648 aaagtgtccagtaaaggtcca 57628
>gb|AC187721.3| Pan troglodytes BAC clone CH251-254F23 from chromosome 7, complete sequence Length = 156432 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 67080 catttttcttaagtctttgagaaaa 67104
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 aaggagctgatggccagcatg 615 ||||||||||||||||||||| Sbjct: 5470669 aaggagctgatggccagcatg 5470689
>gb|AC147187.2| Pan troglodytes clone CH251-116A11, complete sequence Length = 160822 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 150982 catttttcttaagtctttgagaaaa 151006
>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence Length = 192484 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 711 atctcgatgggcaacattcaggcag 735 ||||| ||||||||||||||||||| Sbjct: 107472 atctcaatgggcaacattcaggcag 107496
>gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosome 19, complete sequence Length = 203390 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 711 atctcgatgggcaacattcaggcag 735 ||||| ||||||||||||||||||| Sbjct: 196287 atctcaatgggcaacattcaggcag 196311
>gb|AC074021.7| Homo sapiens BAC clone RP11-354H2 from 7, complete sequence Length = 26765 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 22235 catttttcttaagtctttgagaaaa 22259
>gb|AC006337.5| Homo sapiens BAC clone RP11-535N23 from 7, complete sequence Length = 172291 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 gacttaacatttttgaaaatt 789 ||||||||||||||||||||| Sbjct: 749 gacttaacatttttgaaaatt 769
>gb|AC104688.2| Homo sapiens BAC clone RP11-123O1 from 7, complete sequence Length = 47088 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 769 gacttaacatttttgaaaatt 789 ||||||||||||||||||||| Sbjct: 1252 gacttaacatttttgaaaatt 1232
>gb|AC182430.2| Pan troglodytes BAC clone CH251-398I16 from chromosome 4, complete sequence Length = 145600 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1401 aaagtgtccagtaaaggtcca 1421 ||||||||||||||||||||| Sbjct: 63287 aaagtgtccagtaaaggtcca 63267
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 450 ttcgattccagcgaggagaatggcc 474 ||||||||| ||||||||||||||| Sbjct: 2487169 ttcgattcccgcgaggagaatggcc 2487145
>dbj|AK039733.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330098E03 product:hypothetical protein, full insert sequence Length = 2016 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1653 gaacatttttctgaagtcttt 1673 ||||||||||||||||||||| Sbjct: 1311 gaacatttttctgaagtcttt 1331
>gb|AC110811.4| Homo sapiens BAC clone RP11-779N22 from 4, complete sequence Length = 21104 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1401 aaagtgtccagtaaaggtcca 1421 ||||||||||||||||||||| Sbjct: 10464 aaagtgtccagtaaaggtcca 10484
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ggaaattttctatcgaatgtt 1858 ||||||||||||||||||||| Sbjct: 19414143 ggaaattttctatcgaatgtt 19414123
>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence Length = 228156 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1401 aaagtgtccagtaaaggtcca 1421 ||||||||||||||||||||| Sbjct: 178692 aaagtgtccagtaaaggtcca 178672
>gb|AC025759.4| Homo sapiens chromosome 5 clone CTD-2367B21, complete sequence Length = 147404 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1935 gaataaatcaataagatggcacttt 1959 ||||||||||||||| ||||||||| Sbjct: 131184 gaataaatcaataagctggcacttt 131160
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 776 catttttgaaaattttctcag 796 ||||||||||||||||||||| Sbjct: 1188846 catttttgaaaattttctcag 1188826
>gb|AC025466.6| Homo sapiens chromosome 5 clone CTD-2317L2, complete sequence Length = 56719 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1935 gaataaatcaataagatggcacttt 1959 ||||||||||||||| ||||||||| Sbjct: 28393 gaataaatcaataagctggcacttt 28369
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ggaaattttctatcgaatgtt 1858 ||||||||||||||||||||| Sbjct: 65409 ggaaattttctatcgaatgtt 65389 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ggaaattttctatcgaatgtt 1858 ||||||||||||||||||||| Sbjct: 67707 ggaaattttctatcgaatgtt 67687
>emb|AL732630.6| Mouse DNA sequence from clone RP23-315J17 on chromosome 11 Contains the 5' end of the Slit3 gene for slit homolog 3 (Drosophila) and a CpG island, complete sequence Length = 88592 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 829 gtagaaaagcatcaaaacttgcaaa 853 |||||||||||||||||||| |||| Sbjct: 67311 gtagaaaagcatcaaaactttcaaa 67287
>emb|AJ721043.1| Gallus gallus mRNA for hypothetical protein, clone 33e6 Length = 2390 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 ctgctgcaaggagctgatggc 608 ||||||||||||||||||||| Sbjct: 2303 ctgctgcaaggagctgatggc 2323
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1739 agcagtgaaagagcatctggtagat 1763 ||||||||||||||||||| ||||| Sbjct: 37537 agcagtgaaagagcatctgctagat 37561
>gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes, complete cds, alternatively spliced Length = 162354 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 137930 catttttcttaagtctttgagaaaa 137954
>gb|AC138731.4| Pongo pygmaeus clone CH253-404N12, complete sequence Length = 163314 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1656 catttttctgaagtctttgagaaaa 1680 ||||||||| ||||||||||||||| Sbjct: 100493 catttttcttaagtctttgagaaaa 100517
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1116 ccacttacagttggtggtggtataagaga 1144 ||||||||||| |||||||| |||||||| Sbjct: 1081745 ccacttacagtaggtggtggaataagaga 1081773
>ref|NM_204378.1| Gallus gallus Fanconi anemia, complementation group G (FANCG), mRNA dbj|AB096039.1| Gallus gallus FANCG mRNA for Fanconi anemia group G protein, complete cds Length = 2420 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 ctgctgcaaggagctgatggc 608 ||||||||||||||||||||| Sbjct: 2332 ctgctgcaaggagctgatggc 2352
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 tacggcgcgggcaacgtccgcagcg 237 |||||||||||||| |||||||||| Sbjct: 425410 tacggcgcgggcaatgtccgcagcg 425434 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 339,556,381 Number of extensions: 17936015 Number of successful extensions: 92447 Number of sequences better than 10.0: 56 Number of HSP's gapped: 92434 Number of HSP's successfully gapped: 125 Length of query: 1984 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1961 Effective length of database: 18,503,978,556 Effective search space: 36286301948316 Effective search space used: 36286301948316 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
