ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf36k05 |
|---|---|
| Clone Library Name | barley_pub |
>Q9M1C7:MRP9_ARATH Multidrug resistance-associated protein 9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1490 Score = 37.7 bits (86), Expect = 0.14 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%) Frame = +3 Query: 1113 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 1229 I YLQQSET KDA+E C K+ L E+EN + EPE++ Sbjct: 604 IASYLQQSETQKDAVEYCSKDHTELSVEIENGAFSWEPESS 644
>Q4K3A8:ATPG_PSEF5 ATP synthase gamma chain - Pseudomonas fluorescens (strain Pf-5 /| ATCC BAA-477) Length = 286 Score = 36.6 bits (83), Expect = 0.32 Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 17/200 (8%) Frame = +3 Query: 735 DMAITSEGPHAVDLLVPFKNNLPAGECSLEGVAGLLLFAGSV-SALAYLGPKESISEAIS 911 DMA+ E +DL V +G A F G+V +A+++LG + SI++ I Sbjct: 102 DMAVNREQGVEIDLCV----------VGSKGAAFFRNFGGNVVAAISHLGEEPSINDLIG 151 Query: 912 DLKVDIIASLRSRLDIILDEADDDSTTNDVENSPSQKVTQVNF--------HELREPYSF 1067 +KV + A L R+D + +N N+ +Q+ T EL+ + + Sbjct: 152 SVKVMLDAYLEGRIDRL------SVVSNKFINTMTQQPTVEQLIPLEATPDQELKHHWDY 205 Query: 1068 SF--PRRILIPWLAGSYICDYLQQSETTKDAMERCKEVISLETEVENSSIVEPE------ 1223 + + L+ L Y+ + Q+ +A E+ +I+++ +N+ + + Sbjct: 206 LYEPDAKELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYN 265 Query: 1224 TAASSATLESFWDVVPGASS 1283 A +A + ++V GA++ Sbjct: 266 KARQAAITQEISEIVGGAAA 285
>Q9HT19:ATPG_PSEAE ATP synthase gamma chain - Pseudomonas aeruginosa| Length = 286 Score = 36.2 bits (82), Expect = 0.42 Identities = 34/165 (20%), Positives = 79/165 (47%), Gaps = 11/165 (6%) Frame = +3 Query: 822 EGVAGLLLFAGSV-SALAYLGPKESISEAISDLKVDIIASLRSRLDIILDEADDDSTTND 998 +G + F G+V +A+++LG + SI++ I +KV + A L R+D + ++ T Sbjct: 121 KGASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEGRIDRLFVVSNKFVNTMT 180 Query: 999 VENSPSQKVTQV--NFHELREPYSFSF--PRRILIPWLAGSYICDYLQQSETTKDAMERC 1166 + + Q + V + EL+ + + + + L+ L Y+ + Q+ +A E+ Sbjct: 181 QKPTVEQLIPLVADDDQELKHHWDYLYEPDAKSLLDGLLVRYVESQVYQAVVENNACEQA 240 Query: 1167 KEVISLETEVENSSIVEPE------TAASSATLESFWDVVPGASS 1283 +I+++ +N+ + + A +A + ++V GA++ Sbjct: 241 ARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAA 285
>Q4ZL23:ATPG_PSEU2 ATP synthase gamma chain - Pseudomonas syringae pv. syringae (strain| B728a) Length = 286 Score = 35.8 bits (81), Expect = 0.54 Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Frame = +3 Query: 735 DMAITSEGPHAVDLLVPFKNNLPAGECSLEGVAGLLLFAGSV-SALAYLGPKESISEAIS 911 DMA+ E +DL V +G A F G+V +A+++LG + SI++ I Sbjct: 102 DMAVNRENGVEIDLCV----------VGSKGAAFFRNFGGNVVAAISHLGEEPSINDLIG 151 Query: 912 DLKVDIIASLRSRLDIILDEADDDSTTNDVENSPSQKVTQVNFHE--LREPYSFSF--PR 1079 +KV + A L R+D + ++ T + + Q + V + L+ + + + Sbjct: 152 SVKVMLDAYLDGRIDRLSVVSNKFINTMTQQPTVEQLIPLVATPDQGLKHHWDYLYEPDA 211 Query: 1080 RILIPWLAGSYICDYLQQSETTKDAMERCKEVISLETEVENSSIVEPE------TAASSA 1241 + L+ L Y+ + Q+ +A E+ +I+++ +N+ + + A +A Sbjct: 212 KELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYNKARQAA 271 Query: 1242 TLESFWDVVPGASS 1283 + ++V GA++ Sbjct: 272 ITQEISEIVGGAAA 285
>Q87TT3:ATPG_PSESM ATP synthase gamma chain - Pseudomonas syringae pv. tomato| Length = 286 Score = 35.8 bits (81), Expect = 0.54 Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Frame = +3 Query: 735 DMAITSEGPHAVDLLVPFKNNLPAGECSLEGVAGLLLFAGSV-SALAYLGPKESISEAIS 911 DMA+ E +DL V +G A F G+V +A+++LG + SI++ I Sbjct: 102 DMAVNRENGVEIDLCV----------VGSKGAAFFRNFGGNVVAAISHLGEEPSINDLIG 151 Query: 912 DLKVDIIASLRSRLDIILDEADDDSTTNDVENSPSQKVTQVNFHE--LREPYSFSF--PR 1079 +KV + A L R+D + ++ T + + Q + V + L+ + + + Sbjct: 152 SVKVMLDAYLDGRIDRLSVVSNKFINTMTQQPTVEQLIPLVATPDQGLKHHWDYLYEPDA 211 Query: 1080 RILIPWLAGSYICDYLQQSETTKDAMERCKEVISLETEVENSSIVEPE------TAASSA 1241 + L+ L Y+ + Q+ +A E+ +I+++ +N+ + + A +A Sbjct: 212 KELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYNKARQAA 271 Query: 1242 TLESFWDVVPGASS 1283 + ++V GA++ Sbjct: 272 ITQEISEIVGGAAA 285
>Q48BG4:ATPG_PSE14 ATP synthase gamma chain - Pseudomonas syringae pv. phaseolicola| (strain 1448A / Race 6) Length = 286 Score = 35.8 bits (81), Expect = 0.54 Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Frame = +3 Query: 735 DMAITSEGPHAVDLLVPFKNNLPAGECSLEGVAGLLLFAGSV-SALAYLGPKESISEAIS 911 DMA+ E +DL V +G A F G+V +A+++LG + SI++ I Sbjct: 102 DMAVNRENGVEIDLCV----------VGSKGAAFFRNFGGNVVAAISHLGEEPSINDLIG 151 Query: 912 DLKVDIIASLRSRLDIILDEADDDSTTNDVENSPSQKVTQVNFHE--LREPYSFSF--PR 1079 +KV + A L R+D + ++ T + + Q + V + L+ + + + Sbjct: 152 SVKVMLDAYLDGRIDRLSVVSNKFINTMTQQPTVEQLIPLVATPDQGLKHHWDYLYEPDA 211 Query: 1080 RILIPWLAGSYICDYLQQSETTKDAMERCKEVISLETEVENSSIVEPE------TAASSA 1241 + L+ L Y+ + Q+ +A E+ +I+++ +N+ + + A +A Sbjct: 212 KELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYNKARQAA 271 Query: 1242 TLESFWDVVPGASS 1283 + ++V GA++ Sbjct: 272 ITQEISEIVGGAAA 285
>Q88BX3:ATPG_PSEPK ATP synthase gamma chain - Pseudomonas putida (strain KT2440)| Length = 286 Score = 35.4 bits (80), Expect = 0.71 Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Frame = +3 Query: 822 EGVAGLLLFAGSV-SALAYLGPKESISEAISDLKVDIIASLRSRLDIILDEADDDSTTND 998 +G +F G+V +A+++LG + SI++ I +KV + A L R+D + +N Sbjct: 121 KGATFFRIFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLDGRIDRL------SVVSNK 174 Query: 999 VENSPSQKVTQVNF--------HELREPYSFSF--PRRILIPWLAGSYICDYLQQSETTK 1148 N+ +QK T +L+ + + + + L+ L Y+ + Q+ Sbjct: 175 FINTMTQKPTVEQLVPLVATPDQDLKHHWDYLYEPDAKELLDGLMVRYVESQVYQAVVEN 234 Query: 1149 DAMERCKEVISLETEVENSSIVEPE------TAASSATLESFWDVVPGASS 1283 +A E+ +I+++ +N+ + E A +A + ++V GA++ Sbjct: 235 NAAEQAARMIAMKNATDNAGDLIKELQLIYNKARQAAITQEISEIVGGAAA 285
>Q18240:SPR2_CAEEL Suppressor of presenilin 2 - Caenorhabditis elegans| Length = 312 Score = 34.7 bits (78), Expect = 1.2 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%) Frame = +3 Query: 885 KESISEAISDLKVDIIASLRSRLDIILDEADDDSTTNDV--------ENSPSQKVTQVNF 1040 +E + A+ DL+V LRS II+ ++ TN+V SPS ++T++ + Sbjct: 99 QEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEW 158 Query: 1041 HELREPYSFSFPR-----RILIPWLAGSYICDYLQQSETTKD 1151 E ++P FP + WL + + D + +E KD Sbjct: 159 KENKKP---PFPEDGDSAHTFLEWLTYAALPDSDEIAEVIKD 197
>Q868Z9:PPN_DROME Papilin precursor - Drosophila melanogaster (Fruit fly)| Length = 2898 Score = 34.3 bits (77), Expect = 1.6 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -2 Query: 1279 EAPGTTSQNDSSVALDAAVSGSTMEEFSTSVSSDITS 1169 E+ G+T D+ + + GST+E+ S+S SSD+TS Sbjct: 1083 ESSGSTESTDAIASDGSTTEGSTVEDLSSSTSSDVTS 1119
>Q7FB56:MRP15_ARATH Putative multidrug resistance-associated protein 15 - Arabidopsis| thaliana (Mouse-ear cress) Length = 1037 Score = 34.3 bits (77), Expect = 1.6 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = +3 Query: 1113 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 1229 I YLQQSET KDA+E C + E+EN + EPE++ Sbjct: 188 IASYLQQSETQKDAVEYCSNDHTEFSVEIENGAFSWEPESS 228
>O60437:PEPL_HUMAN Periplakin - Homo sapiens (Human)| Length = 1756 Score = 33.5 bits (75), Expect = 2.7 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = +3 Query: 1125 LQQSETTKDAMERCKEVISLETEVENSSIVEPETAASSATLESFWDVVPGASSRVWAGPS 1304 L+Q +D+ ER K++ ++ E+ +EPE S+A E+F +PG+ + Sbjct: 533 LEQGRAVQDSAERAKDLKNITNELLR---IEPEKTRSTAEGEAFIQALPGSGTTPLLRTQ 589 Query: 1305 LEDGRPK 1325 +ED K Sbjct: 590 VEDTNRK 596
>Q5ZKC1:EIF2A_CHICK Eukaryotic translation initiation factor 2A - Gallus gallus| (Chicken) Length = 586 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = -2 Query: 907 IASEIDSFGPKYANALTDPAKRSSPATPSKLHSPAGKLFLKGTSKSTACGPSEVMAISSE 728 + SE+ S PK A A PA R+ P T SKLH +K S S+ P A+ ++ Sbjct: 431 VPSELPSAEPKPAQAYRPPALRNKPVTSSKLHEDEPPQNMKPQSGSSE-KPLSKTALKNQ 489 Query: 727 NRSPSIKA 704 + KA Sbjct: 490 KKHEPKKA 497
>Q6S6W0:VGLX_EHV1V Glycoprotein X precursor - Equine herpesvirus 1 (strain V592)| (EHV-1) (Equine abortion virus) Length = 866 Score = 33.1 bits (74), Expect = 3.5 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Frame = -2 Query: 124 SEETLSFPTTSPTCDRRTPEEAT-----PSSKALMRA--SSATTAFT 5 +E T PT++PT D TP EAT P S + + S+ TTAFT Sbjct: 380 AESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATTTAFT 426
>P28968:VGLX_EHV1B Glycoprotein X precursor - Equine herpesvirus 1 (strain Ab4p)| (EHV-1) (Equine abortion virus) Length = 797 Score = 33.1 bits (74), Expect = 3.5 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Frame = -2 Query: 124 SEETLSFPTTSPTCDRRTPEEAT-----PSSKALMRA--SSATTAFT 5 +E T PT++PT D TP EAT P S + + S+ TTAFT Sbjct: 311 AESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATTTAFT 357
>Q8BJW6:EIF2A_MOUSE Eukaryotic translation initiation factor 2A - Mus musculus (Mouse)| Length = 581 Score = 33.1 bits (74), Expect = 3.5 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -2 Query: 907 IASEIDSFGPKYANALTDPAKRSSPATPSKLH 812 + SE+ S PK A A PA R+ P T SKLH Sbjct: 431 VPSEVPSEEPKVATAYRPPALRNKPVTNSKLH 462
>P37272:PSY_CAPAN Phytoene synthase, chloroplast precursor - Capsicum annuum (Bell| pepper) Length = 419 Score = 32.7 bits (73), Expect = 4.6 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +2 Query: 1190 RSGELLHC*TRNRSI*CDTRIILGCGA--WSFLTCVGGAQSGRWAP*TGDVFRESTGQRF 1363 R G + + R++ C+ RI G G WSF + +GGAQ+G +G++F Sbjct: 25 REGNRIFDSSGRRNLACNERIKRGGGKQRWSFGSYLGGAQTG-------------SGRKF 71 Query: 1364 QHPSCLVCAPGGSST 1408 S +V P G T Sbjct: 72 SVRSAIVATPAGEMT 86
>P33485:VNUA_PRVKA Probable nuclear antigen - Pseudorabies virus (strain Kaplan) (PRV)| Length = 1733 Score = 32.0 bits (71), Expect = 7.8 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = -1 Query: 149 EQGVDEGAVGGDA---ELPDHQPHLRPKDAGGGDAVLEGLDARLVG 21 +Q +++ A G DA +L H LR + GG DA EGLD RL G Sbjct: 1134 QQALEDAAAGQDAGVRQLAGHAAGLRGGE-GGADAGAEGLDGRLPG 1178
>A1Z6W3:PRIC1_DROME Protein prickle - Drosophila melanogaster (Fruit fly)| Length = 1299 Score = 32.0 bits (71), Expect = 7.8 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Frame = -2 Query: 889 SFGPKYANALTDPAKR---------SSPATPSKLHSPAGKLFLKGTSKSTACGP 755 S PKY+NA P S+P+ PS LH PAG GTS ++A P Sbjct: 460 SANPKYSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAG-----GTSSASAHAP 508
>Q9D772:CI025_MOUSE Uncharacterized protein C9orf25 homolog - Mus musculus (Mouse)| Length = 157 Score = 32.0 bits (71), Expect = 7.8 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 397 EGVALNEPSEDHM*IPMTVIPPRSILDTCRACSATQSTS 281 +G L+E +D + +IPP+S+ TC C AT ST+ Sbjct: 118 DGYRLDEIPDDE---DLDLIPPKSVNPTCMCCQATSSTA 153
>Q8IW50:CI025_HUMAN Uncharacterized protein C9orf25 - Homo sapiens (Human)| Length = 157 Score = 32.0 bits (71), Expect = 7.8 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 397 EGVALNEPSEDHM*IPMTVIPPRSILDTCRACSATQSTS 281 +G L+E +D + +IPP+S+ TC C AT ST+ Sbjct: 118 DGYRLDEIPDDE---DLDLIPPKSVNPTCMCCQATSSTA 153
>Q6DC60:CI025_DANRE Uncharacterized protein C9orf25 homolog - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 186 Score = 32.0 bits (71), Expect = 7.8 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 397 EGVALNEPSEDHM*IPMTVIPPRSILDTCRACSATQSTS 281 +G L+E +D + +IPP+S+ TC C AT ST+ Sbjct: 147 DGYRLDEIPDDE---DLDLIPPKSVNPTCMCCQATSSTA 182 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 268,977,210 Number of extensions: 5731135 Number of successful extensions: 16460 Number of sequences better than 10.0: 21 Number of HSP's gapped: 16438 Number of HSP's successfully gapped: 21 Length of query: 549 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 431 Effective length of database: 68,319,629 Effective search space: 29445760099 Effective search space used: 29445760099 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
