ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf36k05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK242760.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090052D03, full insert sequence Length = 1611 Score = 735 bits (371), Expect = 0.0 Identities = 767/899 (85%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 351 ttcgatgtcgactggctcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 410 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| || |||||||| ||| | || Sbjct: 411 atgaccgtcataggtatttacatatgggcgtcagaagcttcattcaaagcgacttcccct 470 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| || ||| | ||| |||| || Sbjct: 471 gctgttttatcacaggttcttagagctgtttctcaggtagctcctttgtatggcactggt 530 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 531 gttgatgagaggctgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 590 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | ||||||| |||||| |||| ||||| ||| |||||||| Sbjct: 591 tgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatagtaaactattagct 650 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 651 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 710 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 711 gagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcagaat 770 Query: 699 gccaaagccttaattgatggagatctgttttcggatgatatggccatcacttcagaaggc 758 |||||||| || |||||||||| ||||||| ||||| |||| || ||||| || || Sbjct: 771 gccaaagctttgattgatggagtcctgtttttggatggcatggacaacactttggaggga 830 Query: 759 ccacacgcagtcgatttgcttgtacctttcaagaacaatttgcctgccggagaatgcagt 818 ||||| || || || ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 831 ccacataacgttgaatttcttgtgcctttcaagaacaatttgcctgccgaagaatgcagt 890 Query: 819 ttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgttggcatactta 878 ||||| || ||||| ||||| |||||||||||||||||||| || || ||||||||| | Sbjct: 891 ttagaaggtgttgctgggctacttctctttgctggatctgtcagcgccttggcatacctg 950 Query: 879 ggcccaaaagaatctatttcggaagctatatctgatctgaaggtggacatcattgcgagc 938 ||||||||||| || ||| | |||| |||||||||||| ||| |||||||||| | ||| Sbjct: 951 ggcccaaaagagtccattgcagaagttatatctgatctaaagctggacatcatcacaagc 1010 Query: 939 ctacgaagcagattagatatcatccttgatgaggcagatgatgactctacaactaatgat 998 || |||||||||| || ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 1011 ctgagaagcagattggacatcatactagatgaggcagatgatgactctactactaacaat 1070 Query: 999 gtggagaattcaccatctcagaaggttacccaagttaattttcatgagttgagagaacct 1058 |||||||||||| |||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 1071 ttggagaattcactgtctcagaaggccactcaagttgtttttcatgagttgagagcacct 1130 Query: 1059 tatagtttctcattccctagaagaatcctgattccttggttagctggctcctatatttgt 1118 || ||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1131 tacagttttccattccctagaagaattctgataccttggttggctggctcctatatttgt 1190 Query: 1119 gactacttgcaacaatcagagacaacgaaggacgcaatggagcgctgcaaggaagtgat 1177 |||||||||||||||||||| |||| | |||| || ||||||||||||||||||||||| Sbjct: 1191 gactacttgcaacaatcagaaacaatggaggatgccatggagcgctgcaaggaagtgat 1249 Score = 129 bits (65), Expect = 3e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||||| ||||||| Sbjct: 186 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgccctcgcctactcc 245 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 246 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 294 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 ggatggtgaaggcggtggtcgccgacgaggcgc 33 ||||||||||| ||||||||| ||||||||||| Sbjct: 106 ggatggtgaagacggtggtcggcgacgaggcgc 138 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1238 tgcgacactagaatcattttgggatgtggtgcctggagctt 1278 |||||| |||| ||| |||||||||||||| |||||||||| Sbjct: 1307 tgcgacgctaggatcgttttgggatgtggtccctggagctt 1347
>ref|NM_001070805.1| Oryza sativa (japonica cultivar-group) Os10g0188900 (Os10g0188900) mRNA, partial cds Length = 1754 Score = 731 bits (369), Expect = 0.0 Identities = 766/899 (85%), Gaps = 7/899 (0%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 393 ttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 452 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| ||||||||||| ||| | || Sbjct: 453 atgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccct 512 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| | ||| | ||| |||| || Sbjct: 513 gctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggt 572 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 573 gttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 632 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | ||||||| |||||| |||| |||| ||| |||||||| Sbjct: 633 tgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagct 692 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 693 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 752 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 753 gagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcagaat 812 Query: 699 gccaaagccttaattgatggagatctgttttcggatgatatggccatcacttcagaaggc 758 |||||||| || |||||||||| ||||||| |||||| |||| || ||||| || || Sbjct: 813 gccaaagctttgattgatggagtcctgtttttggatgacatggacaacactttggagggg 872 Query: 759 ccacacgcagtcgatttgcttgtacctttcaagaacaatttgcctgccggagaatgcagt 818 ||||| || || || ||||| |||||||||||||||||||| || || ||| Sbjct: 873 ccacataacgttgaatttcttgtgcctttcaagaacaatttgccggc-------tgaagt 925 Query: 819 ttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgttggcatactta 878 |||||||| ||||| ||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 926 ttagagggtgttgctgggctacttctctttgctggatctgtcagcgccttggcatacttg 985 Query: 879 ggcccaaaagaatctatttcggaagctatatctgatctgaaggtggacatcattgcgagc 938 ||||||||||| || ||| | |||| |||||||||||| ||| |||||||||| | ||| Sbjct: 986 ggcccaaaagagtccattgcagaagttatatctgatctaaagttggacatcatcacaagc 1045 Query: 939 ctacgaagcagattagatatcatccttgatgaggcagatgatgactctacaactaatgat 998 || |||||||||| |||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 1046 ctgagaagcagattggatatcatactagatgaggcagatgatgactctactactaacaat 1105 Query: 999 gtggagaattcaccatctcagaaggttacccaagttaattttcatgagttgagagaacct 1058 |||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 1106 ttggagaattcactgtctcagaaggccacccaagttgtttttcatgagttgagagtacct 1165 Query: 1059 tatagtttctcattccctagaagaatcctgattccttggttagctggctcctatatttgt 1118 || |||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1166 tacagtttcccattccctagaagaattctgataccttggttggctggctcctatatttgt 1225 Query: 1119 gactacttgcaacaatcagagacaacgaaggacgcaatggagcgctgcaaggaagtgat 1177 |||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||| Sbjct: 1226 gactacttgcaacaatcagaaacaacggaggatgccatggagcgctgcaaggaagtgat 1284 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 219 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 278 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 279 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 327 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1245 ctagaatcattttgggatgtggtgcctggagctt 1278 |||| ||| |||||||||||||| |||||||||| Sbjct: 1349 ctaggatcgttttgggatgtggtacctggagctt 1382
>dbj|AK070874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F23, full insert sequence Length = 1755 Score = 731 bits (369), Expect = 0.0 Identities = 766/899 (85%), Gaps = 7/899 (0%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 394 ttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 453 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| ||||||||||| ||| | || Sbjct: 454 atgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccct 513 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| | ||| | ||| |||| || Sbjct: 514 gctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggt 573 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 574 gttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 633 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | ||||||| |||||| |||| |||| ||| |||||||| Sbjct: 634 tgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagct 693 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 694 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 753 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 754 gagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcagaat 813 Query: 699 gccaaagccttaattgatggagatctgttttcggatgatatggccatcacttcagaaggc 758 |||||||| || |||||||||| ||||||| |||||| |||| || ||||| || || Sbjct: 814 gccaaagctttgattgatggagtcctgtttttggatgacatggacaacactttggagggg 873 Query: 759 ccacacgcagtcgatttgcttgtacctttcaagaacaatttgcctgccggagaatgcagt 818 ||||| || || || ||||| |||||||||||||||||||| || || ||| Sbjct: 874 ccacataacgttgaatttcttgtgcctttcaagaacaatttgccggc-------tgaagt 926 Query: 819 ttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgttggcatactta 878 |||||||| ||||| ||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 927 ttagagggtgttgctgggctacttctctttgctggatctgtcagcgccttggcatacttg 986 Query: 879 ggcccaaaagaatctatttcggaagctatatctgatctgaaggtggacatcattgcgagc 938 ||||||||||| || ||| | |||| |||||||||||| ||| |||||||||| | ||| Sbjct: 987 ggcccaaaagagtccattgcagaagttatatctgatctaaagttggacatcatcacaagc 1046 Query: 939 ctacgaagcagattagatatcatccttgatgaggcagatgatgactctacaactaatgat 998 || |||||||||| |||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 1047 ctgagaagcagattggatatcatactagatgaggcagatgatgactctactactaacaat 1106 Query: 999 gtggagaattcaccatctcagaaggttacccaagttaattttcatgagttgagagaacct 1058 |||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 1107 ttggagaattcactgtctcagaaggccacccaagttgtttttcatgagttgagagtacct 1166 Query: 1059 tatagtttctcattccctagaagaatcctgattccttggttagctggctcctatatttgt 1118 || |||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1167 tacagtttcccattccctagaagaattctgataccttggttggctggctcctatatttgt 1226 Query: 1119 gactacttgcaacaatcagagacaacgaaggacgcaatggagcgctgcaaggaagtgat 1177 |||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||| Sbjct: 1227 gactacttgcaacaatcagaaacaacggaggatgccatggagcgctgcaaggaagtgat 1285 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 220 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 279 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 280 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 328 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1245 ctagaatcattttgggatgtggtgcctggagctt 1278 |||| ||| |||||||||||||| |||||||||| Sbjct: 1350 ctaggatcgttttgggatgtggtacctggagctt 1383
>dbj|AK059182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G02, full insert sequence Length = 1353 Score = 369 bits (186), Expect = 2e-98 Identities = 378/442 (85%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 325 ttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 384 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| ||||||||||| ||| | || Sbjct: 385 atgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccct 444 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| | ||| | ||| |||| || Sbjct: 445 gctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggt 504 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 505 gttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 564 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | |||||||| |||||| |||| |||| ||| |||||||| Sbjct: 565 tgtgatatgagctcaggacgtctaaggccatgtgacttcaagtatactaaactattagct 624 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 625 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 684 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 685 gagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcagaat 744 Query: 699 gccaaagccttaattgatggag 720 |||||||| || |||||||||| Sbjct: 745 gccaaagctttgattgatggag 766 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 151 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 210 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 211 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 259
>dbj|AK241953.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075092B19, full insert sequence Length = 1274 Score = 361 bits (182), Expect = 5e-96 Identities = 377/442 (85%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 302 ttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 361 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| ||||||||||| ||| | || Sbjct: 362 atgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccct 421 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| | ||| | ||| |||| || Sbjct: 422 gctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggt 481 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 482 gttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 541 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | ||||||| |||||| |||| |||| ||| |||||||| Sbjct: 542 tgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagct 601 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 602 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 661 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 662 gagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcagaat 721 Query: 699 gccaaagccttaattgatggag 720 |||||||| || |||||||||| Sbjct: 722 gccaaagctttgattgatggag 743 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 128 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 187 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 188 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 236
>dbj|AK101911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071G07, full insert sequence Length = 1350 Score = 361 bits (182), Expect = 5e-96 Identities = 377/442 (85%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 391 ttcgatgtcgactgggtcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 450 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| ||||||||||| ||| | || Sbjct: 451 atgaccgtcataggtatttacatatgggcgtcagaagcttcgttcaaagcgacttcccct 510 Query: 399 gctgttttatcacaggttattagagtggtttctcagtcagttccctggtacggcagtgac 458 |||||||||||||||||| |||||| ||||||||| | ||| | ||| |||| || Sbjct: 511 gctgttttatcacaggttcttagagctgtttctcaggttgctcctttgtatggcactggt 570 Query: 459 tttgatgagaggctgctccttcatctctcttacagcccaagaaggtgggcctgtcgcata 518 |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 571 gttgatgagagactgctcattcatatttcttacagcccaagaaggtgggcctgtcgtata 630 Query: 519 tgtgagatggcatcaggaagcctaaggccgtgtgacctcaaatatagcaaattattagct 578 ||||| ||| |||||| | ||||||| |||||| |||| |||| ||| |||||||| Sbjct: 631 tgtgatatgagctcaggacgtttaaggccatgtgacttcaagtatactaaactattagct 690 Query: 579 tcacttcaaactttcagatgcacatacaattttgagataagattaacagtacaagctgct 638 || ||||||||||||||||||||||| ||||||||||||||| | |||| ||| Sbjct: 691 tctcttcaaactttcagatgcacatataattttgagataagactgccagttgttcaagct 750 Query: 639 gagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcagaat 698 |||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 751 gagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcagaat 810 Query: 699 gccaaagccttaattgatggag 720 |||||||| || |||||||||| Sbjct: 811 gccaaagctttgattgatggag 832 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 217 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 276 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 277 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 325
>ref|NM_001067295.1| Oryza sativa (japonica cultivar-group) Os08g0101400 (Os08g0101400) mRNA, complete cds Length = 654 Score = 351 bits (177), Expect = 5e-93 Identities = 321/369 (86%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 ||||||||||||||| || ||||| ||||| |||||||||||||||||||| || || || Sbjct: 21 agaatgcagtttagaaggtgttgctgggctacttctctttgctggatctgtcagcgcctt 80 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggtggacat 928 ||||||| | ||||||||||| || ||| | |||| |||||||||||| ||| ||||||| Sbjct: 81 ggcatacctgggcccaaaagagtccattgcagaagttatatctgatctaaagctggacat 140 Query: 929 cattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatgactctac 988 ||| | ||||| |||||||||| || ||||| || ||||||||||||||||||||||| Sbjct: 141 catcacaagcctgagaagcagattggacatcatactagatgaggcagatgatgactctac 200 Query: 989 aactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttcatgagtt 1048 ||||| || |||||||||||| |||||||||| || |||||| |||||||||||| Sbjct: 201 tactaacaatttggagaattcactgtctcagaaggccactcaagttgtttttcatgagtt 260 Query: 1049 gagagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctc 1108 ||||| |||||| ||||| |||||||||||||||| ||||| |||||||| |||||||| Sbjct: 261 gagagcaccttacagttttccattccctagaagaattctgataccttggttggctggctc 320 Query: 1109 ctatatttgtgactacttgcaacaatcagagacaacgaaggacgcaatggagcgctgcaa 1168 |||||||||||||||||||||||||||||| |||| | |||| || |||||||||||||| Sbjct: 321 ctatatttgtgactacttgcaacaatcagaaacaatggaggatgccatggagcgctgcaa 380 Query: 1169 ggaagtgat 1177 ||||||||| Sbjct: 381 ggaagtgat 389 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1238 tgcgacactagaatcattttgggatgtggtgcctggagctt 1278 |||||| |||| ||| |||||||||||||| |||||||||| Sbjct: 447 tgcgacgctaggatcgttttgggatgtggtccctggagctt 487
>gb|AY110989.1| Zea mays CL5869_1 mRNA sequence Length = 917 Score = 240 bits (121), Expect = 1e-59 Identities = 308/371 (83%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 |||||||||||||||||||||||| ||||| ||| |||| ||||||||| || || || Sbjct: 58 agaatgcagtttagagggagttgctgggctcattcgctttattggatctgtcagcgcctt 117 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggtggacat 928 |||||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 118 ggcatatttaggccctaaagaatctatttcagaagctatatctgatctaaaggcggacat 177 Query: 929 cattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatgactctac 988 | || | || || || | || |||||||||||||||||||||||||||| | || | Sbjct: 178 cgttacaagtctnnnnngccggttggatatcatccttgatgaggcagatgatggccctgc 237 Query: 989 aactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttcatgagtt 1048 ||| ||| |||||||| |||||||||||||||| || ||||||| ||||||||||| Sbjct: 238 cactgctgaagtggagaaatcaccatctcagaaggccactcaagttatatttcatgagtt 297 Query: 1049 gagagaaccttatagtttctcattccctagaagaatcctgattccttgg-ttagctggct 1107 |||||||||||| || ||||||| ||||| ||||||| |||||| | ||| ||| Sbjct: 298 gagagaaccttacagnnnnncattcccgagaagggtcctgataccttggctgagc-ggca 356 Query: 1108 cctatatttgtgactacttgcaacaatcagagacaacgaaggacgcaatggagcgctgca 1167 ||||| ||||||| |||||||||||| |||||||| | |||| ||| |||| |||| || Sbjct: 357 cctatgtttgtgattacttgcaacaaccagagacagcagaggatgcagtggatcgcttca 416 Query: 1168 aggaagtgata 1178 ||||||||||| Sbjct: 417 aggaagtgata 427 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1244 actagaatcattttgggatgtggtgcctgga 1274 ||||||||| ||||||||| ||||||||||| Sbjct: 499 actagaatccttttgggatatggtgcctgga 529
>ref|NM_001067294.1| Oryza sativa (japonica cultivar-group) Os08g0101200 (Os08g0101200) mRNA, complete cds Length = 453 Score = 141 bits (71), Expect = 9e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggtgtcgaggatgctccttggagga 338 ||||||||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 311 ttcgatgtcgactggctcgccgagcacgcgcgccaggtctcgaggatgcttcttggagga 370 Query: 339 atgactgtcataggtatctacatatggtcttctgaaggctcgttcaaagctactccttct 398 ||||| ||||||||||| ||||||||| | || |||| || |||||||| ||| | || Sbjct: 371 atgaccgtcataggtatttacatatgggcgtcagaagcttcattcaaagcgacttcccct 430 Query: 399 gctgttttatcacaggttattag 421 |||||||||||||||||| |||| Sbjct: 431 gctgttttatcacaggttcttag 453 Score = 135 bits (68), Expect = 6e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 81 tcgcaggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctac 140 |||||||||||||| || ||||| |||||||||| ||| |||||||| ||||||| |||| Sbjct: 143 tcgcaggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgccctcgcctac 202 Query: 141 tccctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 203 tccctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 254 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 atggtgaaggcggtggtcgccgacgaggcgc 33 ||||||||| ||||||||| ||||||||||| Sbjct: 1 atggtgaagacggtggtcggcgacgaggcgc 31
>gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0079H13 map E60284SA, complete sequence Length = 116863 Score = 135 bits (68), Expect = 6e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 1050 agagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctcc 1109 |||| |||||| |||||| |||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 28236 agagtaccttacagtttcccattccctagaagaattctgataccttggttggctggctcc 28295 Query: 1110 tatatttgtgactacttgcaacaatcagagacaacg 1145 ||||||||||||||||||||||||||||| |||||| Sbjct: 28296 tatatttgtgactacttgcaacaatcagaaacaacg 28331 Score = 129 bits (65), Expect = 3e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 636 gctgagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcag 695 ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| Sbjct: 26830 gctgagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcag 26889 Query: 696 aatgccaaagccttaattgatggag 720 ||||||||||| || |||||||||| Sbjct: 26890 aatgccaaagctttgattgatggag 26914 Score = 123 bits (62), Expect = 2e-24 Identities = 101/114 (88%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || || Sbjct: 27249 agaatgcagtttagagggtgttgctgggctacttctctttgctggatctgtcagcgcctt 27308 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggt 922 ||||||||| ||||||||||| || ||| | |||| |||||||||||| ||||| Sbjct: 27309 ggcatacttgggcccaaaagagtccattgcagaagttatatctgatctaaaggt 27362 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 23746 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 23805 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23806 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 23854 Score = 115 bits (58), Expect = 5e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 922 tggacatcattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatg 981 |||||||||| | ||||| |||||||||| |||||||| || |||||||||||||||| Sbjct: 27888 tggacatcatcacaagcctgagaagcagattggatatcatactagatgaggcagatgatg 27947 Query: 982 actctacaactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttc 1041 ||||||| ||||| || |||||||||||| |||||||||| ||||||||| ||||| Sbjct: 27948 actctactactaacaatttggagaattcactgtctcagaaggccacccaagttgtttttc 28007 Query: 1042 atgagttgag 1051 |||||||||| Sbjct: 28008 atgagttgag 28017 Score = 109 bits (55), Expect = 3e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 501 aggtgggcctgtcgcatatgtgagatggcatcaggaagcctaaggccgtgtgacctcaaa 560 |||||||||||||| |||||||| ||| |||||| | ||||||| |||||| |||| Sbjct: 26426 aggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaag 26485 Query: 561 tatagcaaattattagcttcacttcaaactttcagatgcacatacaattttgagataag 619 |||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 26486 tatactaaactattagcttctcttcaaactttcagatgcacatataattttgagataag 26544 Score = 105 bits (53), Expect = 5e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 311 acaggtgtcgaggatgctccttggaggaatgactgtcataggtatctacatatggtcttc 370 |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct: 24426 acaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtc 24485 Query: 371 tgaaggctcgttcaaagctactccttctgctgttttatcacaggt 415 |||| ||||||||||| ||| | ||||||||||||||||||| Sbjct: 24486 agaagcttcgttcaaagcgacttcccctgctgttttatcacaggt 24530 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggt 316 ||||||||||||||||||||||||||||| || ||||| Sbjct: 23920 ttcgatgtcgactgggtcgccgagcacgcgcgccaggt 23957 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 460 ttgatgagaggctgctccttcatctctcttacagcccaagaaggtg 505 |||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 24734 ttgatgagagactgctcattcatatttcttacagcccaagaaggtg 24779 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1155 atggagcgctgcaaggaagtgat 1177 ||||||||||||||||||||||| Sbjct: 28868 atggagcgctgcaaggaagtgat 28890 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 cttgtacctttcaagaacaatttgcc 802 ||||| |||||||||||||||||||| Sbjct: 27125 cttgtgcctttcaagaacaatttgcc 27150 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1245 ctagaatcattttgggatgtggtgcctggagctt 1278 |||| ||| |||||||||||||| |||||||||| Sbjct: 28955 ctaggatcgttttgggatgtggtacctggagctt 28988
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 135 bits (68), Expect = 6e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 1050 agagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctcc 1109 |||| |||||| |||||| |||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 124181 agagtaccttacagtttcccattccctagaagaattctgataccttggttggctggctcc 124122 Query: 1110 tatatttgtgactacttgcaacaatcagagacaacg 1145 ||||||||||||||||||||||||||||| |||||| Sbjct: 124121 tatatttgtgactacttgcaacaatcagaaacaacg 124086 Score = 129 bits (65), Expect = 3e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 636 gctgagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcag 695 ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| Sbjct: 125587 gctgagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcag 125528 Query: 696 aatgccaaagccttaattgatggag 720 ||||||||||| || |||||||||| Sbjct: 125527 aatgccaaagctttgattgatggag 125503 Score = 123 bits (62), Expect = 2e-24 Identities = 101/114 (88%) Strand = Plus / Minus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || || Sbjct: 125168 agaatgcagtttagagggtgttgctgggctacttctctttgctggatctgtcagcgcctt 125109 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggt 922 ||||||||| ||||||||||| || ||| | |||| |||||||||||| ||||| Sbjct: 125108 ggcatacttgggcccaaaagagtccattgcagaagttatatctgatctaaaggt 125055 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 128671 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 128612 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128611 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 128563 Score = 115 bits (58), Expect = 5e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 922 tggacatcattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatg 981 |||||||||| | ||||| |||||||||| |||||||| || |||||||||||||||| Sbjct: 124529 tggacatcatcacaagcctgagaagcagattggatatcatactagatgaggcagatgatg 124470 Query: 982 actctacaactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttc 1041 ||||||| ||||| || |||||||||||| |||||||||| ||||||||| ||||| Sbjct: 124469 actctactactaacaatttggagaattcactgtctcagaaggccacccaagttgtttttc 124410 Query: 1042 atgagttgag 1051 |||||||||| Sbjct: 124409 atgagttgag 124400 Score = 109 bits (55), Expect = 3e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 501 aggtgggcctgtcgcatatgtgagatggcatcaggaagcctaaggccgtgtgacctcaaa 560 |||||||||||||| |||||||| ||| |||||| | ||||||| |||||| |||| Sbjct: 125991 aggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaag 125932 Query: 561 tatagcaaattattagcttcacttcaaactttcagatgcacatacaattttgagataag 619 |||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 125931 tatactaaactattagcttctcttcaaactttcagatgcacatataattttgagataag 125873 Score = 105 bits (53), Expect = 5e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 311 acaggtgtcgaggatgctccttggaggaatgactgtcataggtatctacatatggtcttc 370 |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct: 127991 acaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtc 127932 Query: 371 tgaaggctcgttcaaagctactccttctgctgttttatcacaggt 415 |||| ||||||||||| ||| | ||||||||||||||||||| Sbjct: 127931 agaagcttcgttcaaagcgacttcccctgctgttttatcacaggt 127887 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 460 ttgatgagaggctgctccttcatctctcttacagcccaagaaggtg 505 |||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 127683 ttgatgagagactgctcattcatatttcttacagcccaagaaggtg 127638 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggt 316 ||||||||||||||||||||||||||||| || ||||| Sbjct: 128497 ttcgatgtcgactgggtcgccgagcacgcgcgccaggt 128460 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1155 atggagcgctgcaaggaagtgat 1177 ||||||||||||||||||||||| Sbjct: 123549 atggagcgctgcaaggaagtgat 123527 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1245 ctagaatcattttgggatgtggtgcctggagctt 1278 |||| ||| |||||||||||||| |||||||||| Sbjct: 123462 ctaggatcgttttgggatgtggtacctggagctt 123429 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 777 cttgtacctttcaagaacaatttgcc 802 ||||| |||||||||||||||||||| Sbjct: 125292 cttgtgcctttcaagaacaatttgcc 125267
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 135 bits (68), Expect = 6e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 1050 agagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctcc 1109 |||| |||||| |||||| |||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 5799684 agagtaccttacagtttcccattccctagaagaattctgataccttggttggctggctcc 5799743 Query: 1110 tatatttgtgactacttgcaacaatcagagacaacg 1145 ||||||||||||||||||||||||||||| |||||| Sbjct: 5799744 tatatttgtgactacttgcaacaatcagaaacaacg 5799779 Score = 129 bits (65), Expect = 3e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 636 gctgagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcag 695 ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| Sbjct: 5798278 gctgagccttttaagaaggttatttcaaaggcaatcagtcatctcacgaagcaagtgcag 5798337 Query: 696 aatgccaaagccttaattgatggag 720 ||||||||||| || |||||||||| Sbjct: 5798338 aatgccaaagctttgattgatggag 5798362 Score = 123 bits (62), Expect = 2e-24 Identities = 101/114 (88%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || || Sbjct: 5798697 agaatgcagtttagagggtgttgctgggctacttctctttgctggatctgtcagcgcctt 5798756 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggt 922 ||||||||| ||||||||||| || ||| | |||| |||||||||||| ||||| Sbjct: 5798757 ggcatacttgggcccaaaagagtccattgcagaagttatatctgatctaaaggt 5798810 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 84 caggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctactcc 143 ||||||||||| || ||||| |||||||||| ||| |||||||| ||||| | ||||||| Sbjct: 5795194 caggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgcccttgcctactcc 5795253 Query: 144 ctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5795254 ctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 5795302 Score = 115 bits (58), Expect = 5e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 922 tggacatcattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatg 981 |||||||||| | ||||| |||||||||| |||||||| || |||||||||||||||| Sbjct: 5799336 tggacatcatcacaagcctgagaagcagattggatatcatactagatgaggcagatgatg 5799395 Query: 982 actctacaactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttc 1041 ||||||| ||||| || |||||||||||| |||||||||| ||||||||| ||||| Sbjct: 5799396 actctactactaacaatttggagaattcactgtctcagaaggccacccaagttgtttttc 5799455 Query: 1042 atgagttgag 1051 |||||||||| Sbjct: 5799456 atgagttgag 5799465 Score = 109 bits (55), Expect = 3e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 501 aggtgggcctgtcgcatatgtgagatggcatcaggaagcctaaggccgtgtgacctcaaa 560 |||||||||||||| |||||||| ||| |||||| | ||||||| |||||| |||| Sbjct: 5797874 aggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaag 5797933 Query: 561 tatagcaaattattagcttcacttcaaactttcagatgcacatacaattttgagataag 619 |||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 5797934 tatactaaactattagcttctcttcaaactttcagatgcacatataattttgagataag 5797992 Score = 105 bits (53), Expect = 5e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 311 acaggtgtcgaggatgctccttggaggaatgactgtcataggtatctacatatggtcttc 370 |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct: 5795874 acaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtc 5795933 Query: 371 tgaaggctcgttcaaagctactccttctgctgttttatcacaggt 415 |||| ||||||||||| ||| | ||||||||||||||||||| Sbjct: 5795934 agaagcttcgttcaaagcgacttcccctgctgttttatcacaggt 5795978 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggt 316 ||||||||||||||||||||||||||||| || ||||| Sbjct: 5795368 ttcgatgtcgactgggtcgccgagcacgcgcgccaggt 5795405 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 460 ttgatgagaggctgctccttcatctctcttacagcccaagaaggtg 505 |||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 5796182 ttgatgagagactgctcattcatatttcttacagcccaagaaggtg 5796227 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1155 atggagcgctgcaaggaagtgat 1177 ||||||||||||||||||||||| Sbjct: 5800316 atggagcgctgcaaggaagtgat 5800338 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 115 tctcctccgaccgcgccctcgtctactccct 145 |||||||||||||||||| |||| ||||||| Sbjct: 18327237 tctcctccgaccgcgcccacgtccactccct 18327207 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 cttgtacctttcaagaacaatttgcc 802 ||||| |||||||||||||||||||| Sbjct: 5798573 cttgtgcctttcaagaacaatttgcc 5798598 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1245 ctagaatcattttgggatgtggtgcctggagctt 1278 |||| ||| |||||||||||||| |||||||||| Sbjct: 5800403 ctaggatcgttttgggatgtggtacctggagctt 5800436
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 135 bits (68), Expect = 6e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 81 tcgcaggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctac 140 |||||||||||||| || ||||| |||||||||| ||| |||||||| ||||||| |||| Sbjct: 72099 tcgcaggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgccctcgcctac 72158 Query: 141 tccctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 72159 tccctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 72210 Score = 123 bits (62), Expect = 2e-24 Identities = 86/94 (91%) Strand = Plus / Plus Query: 1050 agagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctcc 1109 |||| |||||| ||||| |||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 76808 agagcaccttacagttttccattccctagaagaattctgataccttggttggctggctcc 76867 Query: 1110 tatatttgtgactacttgcaacaatcagagacaa 1143 ||||||||||||||||||||||||||||| |||| Sbjct: 76868 tatatttgtgactacttgcaacaatcagaaacaa 76901 Score = 121 bits (61), Expect = 8e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 636 gctgagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcag 695 ||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||| Sbjct: 75377 gctgagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcag 75436 Query: 696 aatgccaaagccttaattgatggag 720 ||||||||||| || |||||||||| Sbjct: 75437 aatgccaaagctttgattgatggag 75461 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 501 aggtgggcctgtcgcatatgtgagatggcatcaggaagcctaaggccgtgtgacctcaaa 560 |||||||||||||| |||||||| ||| |||||| | ||||||| |||||| |||| Sbjct: 74969 aggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaag 75028 Query: 561 tatagcaaattattagcttcacttcaaactttcagatgcacatacaattttgagataag 619 ||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 75029 tatagtaaactattagcttctcttcaaactttcagatgcacatataattttgagataag 75087 Score = 107 bits (54), Expect = 1e-19 Identities = 99/114 (86%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 ||||||||||||||| || ||||| ||||| |||||||||||||||||||| || || || Sbjct: 75795 agaatgcagtttagaaggtgttgctgggctacttctctttgctggatctgtcagcgcctt 75854 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggt 922 ||||||| | ||||||||||| || ||| | |||| |||||||||||| ||||| Sbjct: 75855 ggcatacctgggcccaaaagagtccattgcagaagttatatctgatctaaaggt 75908 Score = 99.6 bits (50), Expect = 3e-17 Identities = 110/130 (84%) Strand = Plus / Plus Query: 922 tggacatcattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatg 981 |||||||||| | ||||| |||||||||| || ||||| || |||||||||||||||| Sbjct: 76420 tggacatcatcacaagcctgagaagcagattggacatcatactagatgaggcagatgatg 76479 Query: 982 actctacaactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttc 1041 ||||||| ||||| || |||||||||||| |||||||||| || |||||| ||||| Sbjct: 76480 actctactactaacaatttggagaattcactgtctcagaaggccactcaagttgtttttc 76539 Query: 1042 atgagttgag 1051 |||||||||| Sbjct: 76540 atgagttgag 76549 Score = 97.6 bits (49), Expect = 1e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 311 acaggtgtcgaggatgctccttggaggaatgactgtcataggtatctacatatggtcttc 370 |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct: 72567 acaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtc 72626 Query: 371 tgaaggctcgttcaaagctactccttctgctgttttatcacaggt 415 |||| || |||||||| ||| | ||||||||||||||||||| Sbjct: 72627 agaagcttcattcaaagcgacttcccctgctgttttatcacaggt 72671 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 460 ttgatgagaggctgctccttcatctctcttacagcccaagaaggtg 505 ||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 72887 ttgatgagaggctgctcattcatatttcttacagcccaagaaggtg 72932 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 777 cttgtacctttcaagaacaatttgcctgccg 807 ||||| ||||||||||||||||||||||||| Sbjct: 75671 cttgtgcctttcaagaacaatttgcctgccg 75701 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggt 316 ||||||||||||||| ||||||||||||| || ||||| Sbjct: 72267 ttcgatgtcgactggctcgccgagcacgcgcgccaggt 72304 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 ggatggtgaaggcggtggtcgccgacgaggcgc 33 ||||||||||| ||||||||| ||||||||||| Sbjct: 71955 ggatggtgaagacggtggtcggcgacgaggcgc 71987 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1238 tgcgacactagaatcattttgggatgtggtgcctggagctt 1278 |||||| |||| ||| |||||||||||||| |||||||||| Sbjct: 77670 tgcgacgctaggatcgttttgggatgtggtccctggagctt 77710 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1155 atggagcgctgcaaggaagtgat 1177 ||||||||||||||||||||||| Sbjct: 77590 atggagcgctgcaaggaagtgat 77612
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 135 bits (68), Expect = 6e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 81 tcgcaggtggggctggtggtcgggaagctcagcgtctcctccgaccgcgccctcgtctac 140 |||||||||||||| || ||||| |||||||||| ||| |||||||| ||||||| |||| Sbjct: 72099 tcgcaggtggggctcgtcgtcggcaagctcagcgcctcttccgaccgtgccctcgcctac 72158 Query: 141 tccctgctccccacgccgcccaccgattccggcgagcccgcttgctccctcc 192 ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 72159 tccctcatccccacgccgcccaccgattccggcgctcccgcttgctccctcc 72210 Score = 123 bits (62), Expect = 2e-24 Identities = 86/94 (91%) Strand = Plus / Plus Query: 1050 agagaaccttatagtttctcattccctagaagaatcctgattccttggttagctggctcc 1109 |||| |||||| ||||| |||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 76808 agagcaccttacagttttccattccctagaagaattctgataccttggttggctggctcc 76867 Query: 1110 tatatttgtgactacttgcaacaatcagagacaa 1143 ||||||||||||||||||||||||||||| |||| Sbjct: 76868 tatatttgtgactacttgcaacaatcagaaacaa 76901 Score = 121 bits (61), Expect = 8e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 636 gctgagccttttaagaaggttctttcaaaggcaatcagtcatctcacaaaggaagtgcag 695 ||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||| Sbjct: 75377 gctgagccttttaagaaggttatttcgaaggcaatcagtcatctcacgaagcaagtgcag 75436 Query: 696 aatgccaaagccttaattgatggag 720 ||||||||||| || |||||||||| Sbjct: 75437 aatgccaaagctttgattgatggag 75461 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 501 aggtgggcctgtcgcatatgtgagatggcatcaggaagcctaaggccgtgtgacctcaaa 560 |||||||||||||| |||||||| ||| |||||| | ||||||| |||||| |||| Sbjct: 74969 aggtgggcctgtcgtatatgtgatatgagctcaggacgtttaaggccatgtgacttcaag 75028 Query: 561 tatagcaaattattagcttcacttcaaactttcagatgcacatacaattttgagataag 619 ||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 75029 tatagtaaactattagcttctcttcaaactttcagatgcacatataattttgagataag 75087 Score = 107 bits (54), Expect = 1e-19 Identities = 99/114 (86%) Strand = Plus / Plus Query: 809 agaatgcagtttagagggagttgccgggctgcttctctttgctggatctgtgagtgcgtt 868 ||||||||||||||| || ||||| ||||| |||||||||||||||||||| || || || Sbjct: 75795 agaatgcagtttagaaggtgttgctgggctacttctctttgctggatctgtcagcgcctt 75854 Query: 869 ggcatacttaggcccaaaagaatctatttcggaagctatatctgatctgaaggt 922 ||||||| | ||||||||||| || ||| | |||| |||||||||||| ||||| Sbjct: 75855 ggcatacctgggcccaaaagagtccattgcagaagttatatctgatctaaaggt 75908 Score = 99.6 bits (50), Expect = 3e-17 Identities = 110/130 (84%) Strand = Plus / Plus Query: 922 tggacatcattgcgagcctacgaagcagattagatatcatccttgatgaggcagatgatg 981 |||||||||| | ||||| |||||||||| || ||||| || |||||||||||||||| Sbjct: 76420 tggacatcatcacaagcctgagaagcagattggacatcatactagatgaggcagatgatg 76479 Query: 982 actctacaactaatgatgtggagaattcaccatctcagaaggttacccaagttaattttc 1041 ||||||| ||||| || |||||||||||| |||||||||| || |||||| ||||| Sbjct: 76480 actctactactaacaatttggagaattcactgtctcagaaggccactcaagttgtttttc 76539 Query: 1042 atgagttgag 1051 |||||||||| Sbjct: 76540 atgagttgag 76549 Score = 97.6 bits (49), Expect = 1e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 311 acaggtgtcgaggatgctccttggaggaatgactgtcataggtatctacatatggtcttc 370 |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct: 72567 acaggtctcgaggatgcttcttggaggaatgaccgtcataggtatttacatatgggcgtc 72626 Query: 371 tgaaggctcgttcaaagctactccttctgctgttttatcacaggt 415 |||| || |||||||| ||| | ||||||||||||||||||| Sbjct: 72627 agaagcttcattcaaagcgacttcccctgctgttttatcacaggt 72671 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 460 ttgatgagaggctgctccttcatctctcttacagcccaagaaggtg 505 ||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 72887 ttgatgagaggctgctcattcatatttcttacagcccaagaaggtg 72932 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 777 cttgtacctttcaagaacaatttgcctgccg 807 ||||| ||||||||||||||||||||||||| Sbjct: 75671 cttgtgcctttcaagaacaatttgcctgccg 75701 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 279 ttcgatgtcgactgggtcgccgagcacgcccgacaggt 316 ||||||||||||||| ||||||||||||| || ||||| Sbjct: 72267 ttcgatgtcgactggctcgccgagcacgcgcgccaggt 72304 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 ggatggtgaaggcggtggtcgccgacgaggcgc 33 ||||||||||| ||||||||| ||||||||||| Sbjct: 71955 ggatggtgaagacggtggtcggcgacgaggcgc 71987 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1238 tgcgacactagaatcattttgggatgtggtgcctggagctt 1278 |||||| |||| ||| |||||||||||||| |||||||||| Sbjct: 77670 tgcgacgctaggatcgttttgggatgtggtccctggagctt 77710 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1155 atggagcgctgcaaggaagtgat 1177 ||||||||||||||||||||||| Sbjct: 77590 atggagcgctgcaaggaagtgat 77612
>ref|NM_001071485.1| Oryza sativa (japonica cultivar-group) Os10g0495300 (Os10g0495300) mRNA, complete cds Length = 3011 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 115 tctcctccgaccgcgccctcgtctactccct 145 |||||||||||||||||| |||| ||||||| Sbjct: 386 tctcctccgaccgcgcccacgtccactccct 416
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 115 tctcctccgaccgcgccctcgtctactccct 145 |||||||||||||||||| |||| ||||||| Sbjct: 23533 tctcctccgaccgcgcccacgtccactccct 23563
>gb|AY149910.1| Mastigamoeba balamuthi malic enzyme gene, complete cds Length = 2300 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 aggccttcgaggacggcgtcgcc 62 ||||||||||||||||||||||| Sbjct: 1945 aggccttcgaggacggcgtcgcc 1967
>ref|XM_001233460.1| PREDICTED: Gallus gallus similar to JUN protein (LOC770141), mRNA Length = 1419 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 gctccctccgggccgccgcccc 205 |||||||||||||||||||||| Sbjct: 796 gctccctccgggccgccgcccc 817
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 4996301 gcggtggtcgccgacgaggtgcgca 4996325 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 5000184 gcggtggtcgccgacgaggtgcgca 5000208 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 5002308 gcggtggtcgccgacgaggtgcgca 5002332
>ref|NM_001072701.1| Oryza sativa (japonica cultivar-group) Os12g0151000 (Os12g0151000) mRNA, complete cds Length = 1507 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 aggcggtggtcgccgacgagg 30 ||||||||||||||||||||| Sbjct: 1319 aggcggtggtcgccgacgagg 1339
>ref|NM_001057507.1| Oryza sativa (japonica cultivar-group) Os03g0694800 (Os03g0694800) mRNA, complete cds Length = 2543 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aactttcagatgcacatacaa 607 ||||||||||||||||||||| Sbjct: 492 aactttcagatgcacatacaa 472
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 4832863 gcggtggtcgccgacgaggtgcgca 4832887 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 4838872 gcggtggtcgccgacgaggtgcgca 4838896
>ref|XM_001085748.1| PREDICTED: Macaca mulatta similar to epidermal retinal dehydrogenase 2, transcript variant 1 (LOC696397), mRNA Length = 2822 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 aggccaagtccaagggcggga 234 ||||||||||||||||||||| Sbjct: 395 aggccaagtccaagggcggga 375
>ref|XM_001085860.1| PREDICTED: Macaca mulatta similar to epidermal retinal dehydrogenase 2, transcript variant 2 (LOC696397), mRNA Length = 3524 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 aggccaagtccaagggcggga 234 ||||||||||||||||||||| Sbjct: 612 aggccaagtccaagggcggga 592
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 4547888 gcggtggtcgccgacgaggtgcgca 4547912
>gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosome 9, complete sequence Length = 142142 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 982 actctacaactaatgatgtgg 1002 ||||||||||||||||||||| Sbjct: 133693 actctacaactaatgatgtgg 133713
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 ctttgatgagaggctgctcct 478 ||||||||||||||||||||| Sbjct: 94732 ctttgatgagaggctgctcct 94752
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 829 ttgccgggctgcttctctttg 849 ||||||||||||||||||||| Sbjct: 1754474 ttgccgggctgcttctctttg 1754494
>gb|AE012300.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 208 of 460 of the complete genome Length = 12110 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 8929 gcggtggtcgccgacgaggtgcgca 8905
>gb|AC104471.6| Homo sapiens 3 BAC RP11-80B17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160698 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1526 tctttcacaatgaacagtttg 1546 ||||||||||||||||||||| Sbjct: 36823 tctttcacaatgaacagtttg 36803
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 aggcggtggtcgccgacgagg 30 ||||||||||||||||||||| Sbjct: 2537692 aggcggtggtcgccgacgagg 2537712
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 ctttgatgagaggctgctcct 478 ||||||||||||||||||||| Sbjct: 13128681 ctttgatgagaggctgctcct 13128661 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aactttcagatgcacatacaa 607 ||||||||||||||||||||| Sbjct: 27623529 aactttcagatgcacatacaa 27623509
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 2679447 gcggtggtcgccgacgaggtgcgca 2679471
>gb|AC112932.19| Mus musculus chromosome 3, clone RP24-512D23, complete sequence Length = 171097 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1475 tcttacattttgtccaaacct 1495 ||||||||||||||||||||| Sbjct: 48706 tcttacattttgtccaaacct 48686
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aactttcagatgcacatacaa 607 ||||||||||||||||||||| Sbjct: 18308 aactttcagatgcacatacaa 18328
>dbj|AK107301.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C09, full insert sequence Length = 1507 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 aggcggtggtcgccgacgagg 30 ||||||||||||||||||||| Sbjct: 1319 aggcggtggtcgccgacgagg 1339
>dbj|AK071362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093M09, full insert sequence Length = 2547 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aactttcagatgcacatacaa 607 ||||||||||||||||||||| Sbjct: 497 aactttcagatgcacatacaa 477
>dbj|AP002451.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-792P2, complete sequence Length = 50359 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 aggctgctccttcatctctct 488 ||||||||||||||||||||| Sbjct: 28729 aggctgctccttcatctctct 28709
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 aggcggtggtcgccgacgagg 30 ||||||||||||||||||||| Sbjct: 130317 aggcggtggtcgccgacgagg 130297
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 aggcggtggtcgccgacgagg 30 ||||||||||||||||||||| Sbjct: 5800 aggcggtggtcgccgacgagg 5780
>dbj|D86947.1| Pseudomonas aeruginosa gene for chemotactic transducer, complete cds Length = 9344 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 2092 gcggtggtcgccgacgaggtgcgca 2116 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 8102 gcggtggtcgccgacgaggtgcgca 8126
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 gcggtggtcgccgacgaggcgcgca 36 ||||||||||||||||||| ||||| Sbjct: 2496868 gcggtggtcgccgacgaggtgcgca 2496844 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 290,873,257 Number of extensions: 15616539 Number of successful extensions: 347246 Number of sequences better than 10.0: 43 Number of HSP's gapped: 347244 Number of HSP's successfully gapped: 137 Length of query: 1649 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1626 Effective length of database: 18,503,978,556 Effective search space: 30087469132056 Effective search space used: 30087469132056 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
