ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001057775.1| Oryza sativa (japonica cultivar-group) Os03g... 256 1e-64
2dbj|AK059983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 1e-64
3emb|CT830379.1| Oryza sativa (indica cultivar-group) cDNA clone:... 248 3e-62
4gb|AY106386.1| Zea mays PCO090181 mRNA sequence 178 2e-41
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 149 2e-32
6gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 149 2e-32
7dbj|AK072451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 2e-32
8gb|AC189327.1| Brassica rapa subsp. pekinensis clone KBrB037A01,... 56 2e-04
9ref|NM_113184.4| Arabidopsis thaliana protein carrier (AT3G22845... 56 2e-04
10gb|AY093742.1| Arabidopsis thaliana AT3g22845/MWI23_22 mRNA, com... 56 2e-04
11gb|AY070742.1| Arabidopsis thaliana AT3g22845/MWI23_22 mRNA, com... 56 2e-04
12dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 56 2e-04
13gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 48 0.059
14emb|X52269.1|MTAROA M. tuberculosis aroA gene for 5-enolpyruvyls... 48 0.059
15emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome... 48 0.059
16emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 48 0.059
17gb|M62708.1|MSGARO M.tuberculosis aroA gene, complete cds 48 0.059
18emb|AL831748.7| Zebrafish DNA sequence from clone DKEY-70P6 in l... 46 0.23
19emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 ... 46 0.23
20emb|CT573250.8| Zebrafish DNA sequence from clone DKEY-229F21 in... 44 0.93
21emb|CR853298.11| Zebrafish DNA sequence from clone CH211-277B24 ... 44 0.93
22gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 44 0.93
23emb|CT027646.21| Zebrafish DNA sequence from clone CH211-38M6 in... 42 3.7
24gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 42 3.7
25gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 42 3.7
26gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, co... 42 3.7
27gb|AY812224.1| Schistosoma japonicum SJCHGC04158 protein mRNA, p... 42 3.7
28gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 42 3.7
29gb|AC104866.10| Mus musculus chromosome 17, clone RP23-268C14, c... 42 3.7
30gb|AC124307.3| Homo sapiens chromosome 15, clone RP11-321K15, co... 42 3.7
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
32gb|AC021351.4|AC021351 Homo sapiens, clone RP11-24N21, complete ... 42 3.7
33gb|AC068069.12|AC068069 Homo sapiens chromosome 15 clone RP11-11... 42 3.7
34dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 3.7
35dbj|AB081587.1| Prunus dulcis genes for S-locus F-Box protein c,... 42 3.7
36gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 42 3.7
37gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cance... 42 3.7
38gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosom... 42 3.7
39dbj|D63706.1|STMORF2B Streptomyces griseus orf2, amfC, orf4, orf... 42 3.7 
>ref|NM_001057775.1| Oryza sativa (japonica cultivar-group) Os03g0744800 (Os03g0744800)
           mRNA, complete cds
          Length = 1084
 Score =  256 bits (129), Expect = 1e-64
 Identities = 227/260 (87%), Gaps = 6/260 (2%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
           |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 252 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 311

                                                                       
Query: 251 gaccatgacatcttctggagctccgaccgccccgaccccggcatcgacttcacggtaact 310
           ||||| ||||||||||||||||||||||      |||||||||||||| |||||||||||
Sbjct: 312 gaccacgacatcttctggagctccgacc------accccggcatcgacctcacggtaact 365

                                                                       
Query: 311 tcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatttgagttt 370
           |||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||||| |||
Sbjct: 366 tcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatttgaattt 425

                                                                       
Query: 371 aatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagcacctgaa 430
           || |||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||
Sbjct: 426 aaagctccaaggggtggaatgtacaagttctgcttccataatccatatggagcacctgaa 485

                               
Query: 431 actgtttctttctacgttca 450
           || |||||||||||| ||||
Sbjct: 486 accgtttctttctacattca 505
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>dbj|AK059983.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F12, full
           insert sequence
          Length = 1084

 Score =  256 bits (129), Expect = 1e-64
 Identities = 227/260 (87%), Gaps = 6/260 (2%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
           |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 252 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 311

                                                                       
Query: 251 gaccatgacatcttctggagctccgaccgccccgaccccggcatcgacttcacggtaact 310
           ||||| ||||||||||||||||||||||      |||||||||||||| |||||||||||
Sbjct: 312 gaccacgacatcttctggagctccgacc------accccggcatcgacctcacggtaact 365

                                                                       
Query: 311 tcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatttgagttt 370
           |||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||||| |||
Sbjct: 366 tcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatttgaattt 425

                                                                       
Query: 371 aatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagcacctgaa 430
           || |||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||
Sbjct: 426 aaagctccaaggggtggaatgtacaagttctgcttccataatccatatggagcacctgaa 485

                               
Query: 431 actgtttctttctacgttca 450
           || |||||||||||| ||||
Sbjct: 486 accgtttctttctacattca 505
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>emb|CT830379.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA035F14, full
           insert sequence
          Length = 1039

 Score =  248 bits (125), Expect = 3e-62
 Identities = 226/260 (86%), Gaps = 6/260 (2%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
           |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 279 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 338

                                                                       
Query: 251 gaccatgacatcttctggagctccgaccgccccgaccccggcatcgacttcacggtaact 310
           ||||| ||||||||||||||||||||||      |||||||||||||| |||||||||||
Sbjct: 339 gaccacgacatcttctggagctccgacc------accccggcatcgacctcacggtaact 392

                                                                       
Query: 311 tcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatttgagttt 370
           |||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||||| |||
Sbjct: 393 tcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatttgaattt 452

                                                                       
Query: 371 aatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagcacctgaa 430
           || |||||||||||||||| |||||| || || ||||||| |||||||||||||||||||
Sbjct: 453 aaagctccaaggggtggaatgtacaacttctgcttccataatccatatggagcacctgaa 512

                               
Query: 431 actgtttctttctacgttca 450
           || |||||||||||| ||||
Sbjct: 513 accgtttctttctacattca 532
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>gb|AY106386.1| Zea mays PCO090181 mRNA sequence
          Length = 1192

 Score =  178 bits (90), Expect = 2e-41
 Identities = 213/253 (84%), Gaps = 7/253 (2%)
 Strand = Plus / Plus

                                                                       
Query: 194 atccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtcgac 253
           ||||||||||| || || ||||||||  ||  |||||| ||| | |||||||| ||||||
Sbjct: 366 atccacgagttcgttccgtacgagggtgacaccgtgtccgggaacttcgtcgttgtcgac 425

                                                                       
Query: 254 catgacatcttctggagctccgaccgccccgaccccggcatcgacttcacggtaacttca 313
           || ||||||||||||||||||||||      |||| ||||||||| |||||||||| |||
Sbjct: 426 cacgacatcttctggagctccgacc------acccaggcatcgacctcacggtaacgtca 479

                                                                       
Query: 314 cgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatttgagtttaat 373
           | ||| || |||||||| || || |||||||||| |||||| || |||||||||||||| 
Sbjct: 480 ccaggtggcaacactgtgtacacattgaagggaaaatctggtgacaaatttgagtttaaa 539

                                                                       
Query: 374 gctcc-aaggggtggaacgtacaagttttgtttccatagtccatatggagcacctgaaac 432
           ||||| ||| ||||| | ||| ||||| || |||||||  ||||||||||||||||||||
Sbjct: 540 gctccgaagaggtggcatgtataagttctgcttccataacccatatggagcacctgaaac 599

                        
Query: 433 tgtttctttctac 445
           |||||||||||||
Sbjct: 600 tgtttctttctac 612
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  149 bits (75), Expect = 2e-32
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                            
Query: 304      ggtaacttcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatt 363
                ||||||||||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||
Sbjct: 30397120 ggtaacttcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatt 30397061

                                                                            
Query: 364      tgagtttaatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagc 423
                ||| ||||| |||||||||||||||| ||||||||| || ||||||| ||||||||||||
Sbjct: 30397060 tgaatttaaagctccaaggggtggaatgtacaagttctgcttccataatccatatggagc 30397001

                                           
Query: 424      acctgaaactgtttctttctacgttca 450
                ||||||||| |||||||||||| ||||
Sbjct: 30397000 acctgaaaccgtttctttctacattca 30396974



 Score =  115 bits (58), Expect = 3e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                            
Query: 191      tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
                |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 30398234 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 30398175

                                                  
Query: 251      gaccatgacatcttctggagctccgaccgccccg 284
                ||||| |||||||||||||||||||||| |||||
Sbjct: 30398174 gaccacgacatcttctggagctccgaccaccccg 30398141
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>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score =  149 bits (75), Expect = 2e-32
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                         
Query: 304   ggtaacttcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatt 363
             ||||||||||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||
Sbjct: 97378 ggtaacttcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatt 97319

                                                                         
Query: 364   tgagtttaatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagc 423
             ||| ||||| |||||||||||||||| ||||||||| || ||||||| ||||||||||||
Sbjct: 97318 tgaatttaaagctccaaggggtggaatgtacaagttctgcttccataatccatatggagc 97259

                                        
Query: 424   acctgaaactgtttctttctacgttca 450
             ||||||||| |||||||||||| ||||
Sbjct: 97258 acctgaaaccgtttctttctacattca 97232



 Score =  115 bits (58), Expect = 3e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                         
Query: 191   tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
             |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 98492 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 98433

                                               
Query: 251   gaccatgacatcttctggagctccgaccgccccg 284
             ||||| |||||||||||||||||||||| |||||
Sbjct: 98432 gaccacgacatcttctggagctccgaccaccccg 98399
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>dbj|AK072451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I03, full
            insert sequence
          Length = 2829

 Score =  149 bits (75), Expect = 2e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                        
Query: 304  ggtaacttcacgaggcggtaacactgtatatacgttgaagggaatatctggcgagaaatt 363
            ||||||||||| ||| || |||||||| ||||| |||||||| |  ||||| || |||||
Sbjct: 1367 ggtaacttcaccaggtggcaacactgtgtatacattgaaggggaagtctggtgacaaatt 1426

                                                                        
Query: 364  tgagtttaatgctccaaggggtggaacgtacaagttttgtttccatagtccatatggagc 423
            ||| ||||| |||||||||||||||| ||||||||| || ||||||| ||||||||||||
Sbjct: 1427 tgaatttaaagctccaaggggtggaatgtacaagttctgcttccataatccatatggagc 1486

                                       
Query: 424  acctgaaactgtttctttctacgttca 450
            ||||||||| |||||||||||| ||||
Sbjct: 1487 acctgaaaccgtttctttctacattca 1513



 Score =  115 bits (58), Expect = 3e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                       
Query: 191 tgcatccacgagttggtgccctacgagggcaacttcgtgtcgggggatttcgtcgtcgtc 250
           |||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||||||||
Sbjct: 253 tgcatccacgagttcgtgccctacgagggggacaccgtgtcggggaacttcgtcgtcgtc 312

                                             
Query: 251 gaccatgacatcttctggagctccgaccgccccg 284
           ||||| |||||||||||||||||||||| |||||
Sbjct: 313 gaccacgacatcttctggagctccgaccaccccg 346
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>gb|AC189327.1| Brassica rapa subsp. pekinensis clone KBrB037A01, complete sequence
          Length = 101151

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 335   acgttgaagggaatatctggcgagaaatttgagtttaatgctccaaggggtggaacgtac 394
             ||||||||||||| ||| || || || ||||||||||| || || ||  |||||| ||||
Sbjct: 90699 acgttgaagggaacatcgggagataagtttgagtttaaggcaccgagaagtggaatgtac 90758

                             
Query: 395   aagttttgtttccata 410
             ||||| ||||||||||
Sbjct: 90759 aagttctgtttccata 90774



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 239   ttcgtcgtcgtcgaccatgacatcttctgg 268
             ||||||||||||||||| || |||||||||
Sbjct: 90475 ttcgtcgtcgtcgaccacgaaatcttctgg 90504
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>ref|NM_113184.4| Arabidopsis thaliana protein carrier (AT3G22845) mRNA, complete cds
          Length = 908

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 341 aagggaatatctggcgagaaatttgagtttaatgctccaaggggtggaacgtacaagttt 400
           ||||||| |||||| || || ||||||||||| |||||||   |||||| |||||| |||
Sbjct: 319 aagggaacatctggagataagtttgagtttaaggctccaaaaagtggaatgtacaaattt 378

                   
Query: 401 tgtttcca 408
           ||||||||
Sbjct: 379 tgtttcca 386



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 239 ttcgtcgtcgtcgaccatgacatcttctgg 268
           |||||||||||||| ||||| |||||||||
Sbjct: 223 ttcgtcgtcgtcgatcatgatatcttctgg 252
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>gb|AY093742.1| Arabidopsis thaliana AT3g22845/MWI23_22 mRNA, complete cds
          Length = 645

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 341 aagggaatatctggcgagaaatttgagtttaatgctccaaggggtggaacgtacaagttt 400
           ||||||| |||||| || || ||||||||||| |||||||   |||||| |||||| |||
Sbjct: 253 aagggaacatctggagataagtttgagtttaaggctccaaaaagtggaatgtacaaattt 312

                   
Query: 401 tgtttcca 408
           ||||||||
Sbjct: 313 tgtttcca 320



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 239 ttcgtcgtcgtcgaccatgacatcttctgg 268
           |||||||||||||| ||||| |||||||||
Sbjct: 157 ttcgtcgtcgtcgatcatgatatcttctgg 186
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>gb|AY070742.1| Arabidopsis thaliana AT3g22845/MWI23_22 mRNA, complete cds
          Length = 891

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 341 aagggaatatctggcgagaaatttgagtttaatgctccaaggggtggaacgtacaagttt 400
           ||||||| |||||| || || ||||||||||| |||||||   |||||| |||||| |||
Sbjct: 318 aagggaacatctggagataagtttgagtttaaggctccaaaaagtggaatgtacaaattt 377

                   
Query: 401 tgtttcca 408
           ||||||||
Sbjct: 378 tgtttcca 385



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 239 ttcgtcgtcgtcgaccatgacatcttctgg 268
           |||||||||||||| ||||| |||||||||
Sbjct: 222 ttcgtcgtcgtcgatcatgatatcttctgg 251
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>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23
          Length = 77273

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 341   aagggaatatctggcgagaaatttgagtttaatgctccaaggggtggaacgtacaagttt 400
             ||||||| |||||| || || ||||||||||| |||||||   |||||| |||||| |||
Sbjct: 77094 aagggaacatctggagataagtttgagtttaaggctccaaaaagtggaatgtacaaattt 77153

                     
Query: 401   tgtttcca 408
             ||||||||
Sbjct: 77154 tgtttcca 77161



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 239   ttcgtcgtcgtcgaccatgacatcttctgg 268
             |||||||||||||| ||||| |||||||||
Sbjct: 76743 ttcgtcgtcgtcgatcatgatatcttctgg 76772
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 48.1 bits (24), Expect = 0.059
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 38      cgaaaccgaccggctcgccgcgct 61
               ||||||||||||||||||||||||
Sbjct: 3599297 cgaaaccgaccggctcgccgcgct 3599320
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>emb|X52269.1|MTAROA M. tuberculosis aroA gene for 5-enolpyruvylshikimate-3-phosphate
            synthase (EC 2.5.1.19)
          Length = 1663

 Score = 48.1 bits (24), Expect = 0.059
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 38   cgaaaccgaccggctcgccgcgct 61
            ||||||||||||||||||||||||
Sbjct: 1225 cgaaaccgaccggctcgccgcgct 1248
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>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 48.1 bits (24), Expect = 0.059
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 38     cgaaaccgaccggctcgccgcgct 61
              ||||||||||||||||||||||||
Sbjct: 136733 cgaaaccgaccggctcgccgcgct 136756
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>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 48.1 bits (24), Expect = 0.059
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 38     cgaaaccgaccggctcgccgcgct 61
              ||||||||||||||||||||||||
Sbjct: 115995 cgaaaccgaccggctcgccgcgct 116018
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>gb|M62708.1|MSGARO M.tuberculosis aroA gene, complete cds
          Length = 1663

 Score = 48.1 bits (24), Expect = 0.059
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 38   cgaaaccgaccggctcgccgcgct 61
            ||||||||||||||||||||||||
Sbjct: 1225 cgaaaccgaccggctcgccgcgct 1248
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>emb|AL831748.7| Zebrafish DNA sequence from clone DKEY-70P6 in linkage group 17
             Contains two novel genes, a novel gene similar to human
             and mouse URKL1 (uridine kinase-like 1), a novel gene
             similar to vertebrate SYP (synaptophysin), a novel gene
             similar to vertebrate CACNA1 (voltage-dependent calcium
             channel P/Q type alpha 1 subunit), a novel pseudogene
             similar to human and mouse EMILIN2 (elastin microfibril
             interfacer 2) and a CpG island, complete sequence
          Length = 202357

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 818   tcattcctgtctatttgattaat 840
             |||||||||||||||||||||||
Sbjct: 40949 tcattcctgtctatttgattaat 40927
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>emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 in linkage group 8,
             complete sequence
          Length = 171493

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 818   tcattcctgtctatttgattaat 840
             |||||||||||||||||||||||
Sbjct: 91769 tcattcctgtctatttgattaat 91747
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>emb|CT573250.8| Zebrafish DNA sequence from clone DKEY-229F21 in linkage group 24,
            complete sequence
          Length = 168300

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 818  tcattcctgtctatttgattaa 839
            ||||||||||||||||||||||
Sbjct: 9501 tcattcctgtctatttgattaa 9480
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>emb|CR853298.11| Zebrafish DNA sequence from clone CH211-277B24 in linkage group 24,
              complete sequence
          Length = 152604

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 818    tcattcctgtctatttgattaa 839
              ||||||||||||||||||||||
Sbjct: 137680 tcattcctgtctatttgattaa 137701
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 43     ccgaccggctcgccgcgctcctcgcc 68
              |||||||||||||||||| |||||||
Sbjct: 327669 ccgaccggctcgccgcgcgcctcgcc 327694
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>emb|CT027646.21| Zebrafish DNA sequence from clone CH211-38M6 in linkage group 2, complete
              sequence
          Length = 176141

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 818    tcattcctgtctatttgatta 838
              |||||||||||||||||||||
Sbjct: 137289 tcattcctgtctatttgatta 137269
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>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 42      accgaccggctcgccgcgctc 62
               |||||||||||||||||||||
Sbjct: 6831750 accgaccggctcgccgcgctc 6831730
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
             complete sequence
          Length = 173074

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 9     ccctcactctctctcctcccgaacc 33
             |||||||||||||| ||||||||||
Sbjct: 56396 ccctcactctctcttctcccgaacc 56372
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>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence
          Length = 150909

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    cactctctctcctcccgaacc 33
             |||||||||||||||||||||
Sbjct: 61621 cactctctctcctcccgaacc 61641
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>gb|AY812224.1| Schistosoma japonicum SJCHGC04158 protein mRNA, partial cds
          Length = 915

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 435 tttctttctacgttcacgatg 455
           |||||||||||||||||||||
Sbjct: 524 tttctttctacgttcacgatg 504
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>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 837    taatgtatgtatattagcttt 857
              |||||||||||||||||||||
Sbjct: 150310 taatgtatgtatattagcttt 150290
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>gb|AC104866.10| Mus musculus chromosome 17, clone RP23-268C14, complete sequence
          Length = 176240

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 846   tatattagctttgattataattagctataatga 878
             ||||||| | |||||||||||||||| ||||||
Sbjct: 15424 tatattaacattgattataattagctgtaatga 15392
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>gb|AC124307.3| Homo sapiens chromosome 15, clone RP11-321K15, complete sequence
          Length = 170807

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 883   accttatatttatgtgtgatatctt 907
             ||||||||||||| |||||||||||
Sbjct: 91069 accttatatttatttgtgatatctt 91045
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 9        ccctcactctctctcctcccgaacc 33
                |||||||||||||| ||||||||||
Sbjct: 20384651 ccctcactctctcttctcccgaacc 20384627
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>gb|AC021351.4|AC021351 Homo sapiens, clone RP11-24N21, complete sequence
          Length = 164291

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 883    accttatatttatgtgtgatatctt 907
              ||||||||||||| |||||||||||
Sbjct: 138867 accttatatttatttgtgatatctt 138843
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>gb|AC068069.12|AC068069 Homo sapiens chromosome 15 clone RP11-11B2, complete sequence
          Length = 175036

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 883   accttatatttatgtgtgatatctt 907
             ||||||||||||| |||||||||||
Sbjct: 55848 accttatatttatttgtgatatctt 55824
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 546     aggaggatgtcatgaagaaga 566
               |||||||||||||||||||||
Sbjct: 2737280 aggaggatgtcatgaagaaga 2737260
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>dbj|AB081587.1| Prunus dulcis genes for S-locus F-Box protein c, Sc-RNase, S
             haplotype-specific F-box protein c, complete cds
          Length = 71953

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    cctcactctctctcctcccga 30
             |||||||||||||||||||||
Sbjct: 21581 cctcactctctctcctcccga 21601
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>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 837  taatgtatgtatattagcttt 857
            |||||||||||||||||||||
Sbjct: 9781 taatgtatgtatattagcttt 9761
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>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194042

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     cactctctctcctcccgaacc 33
              |||||||||||||||||||||
Sbjct: 158370 cactctctctcctcccgaacc 158350
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>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete
             sequence
          Length = 162175

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 846   tatattagctttgattataattagctataatga 878
             ||||||| | |||||||||||||||| ||||||
Sbjct: 12331 tatattaacattgattataattagctgtaatga 12363
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>dbj|D63706.1|STMORF2B Streptomyces griseus orf2, amfC, orf4, orf5 genes, complete cds
          Length = 4045

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   cgaccggctcgccgcgctcct 64
            |||||||||||||||||||||
Sbjct: 3065 cgaccggctcgccgcgctcct 3045


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 143,730,106
Number of extensions: 7434069
Number of successful extensions: 162704
Number of sequences better than 10.0: 39
Number of HSP's gapped: 162703
Number of HSP's successfully gapped: 51
Length of query: 970
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 947
Effective length of database: 18,503,978,556
Effective search space: 17523267692532
Effective search space used: 17523267692532
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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