No.
Definition
Score (bits)
E Value
1 dbj|AK243591.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
190
2e-44
2 ref|NM_001049944.1| Oryza sativa (japonica cultivar-group) Os01g...
190
2e-44
3 gb|AY219173.1| Zea mays submergence induced protein SI397 mRNA, ...
170
2e-38
4 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
167
3e-37
5 dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D...
167
3e-37
6 dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic D...
167
3e-37
7 gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, c...
54
0.003
8 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
54
0.003
9 gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, c...
54
0.003
10 emb|BX819885.1|CNS0A9ZP Arabidopsis thaliana Full-length cDNA Co...
52
0.011
11 gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s...
50
0.042
12 ref|NM_079256.3| Drosophila melanogaster Chorion protein 19 CG65...
50
0.042
13 gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell...
50
0.042
14 emb|X02497.1|DMCHORSG D.melanogaster chorion genes s18-1, s15-1 ...
50
0.042
15 ref|XM_001191911.1| PREDICTED: Strongylocentrotus purpuratus sim...
46
0.66
16 ref|XR_026272.1| PREDICTED: Strongylocentrotus purpuratus simila...
46
0.66
17 ref|XM_790662.2| PREDICTED: Strongylocentrotus purpuratus simila...
46
0.66
18 ref|NM_001068287.1| Oryza sativa (japonica cultivar-group) Os08g...
46
0.66
19 ref|NM_001068286.1| Oryza sativa (japonica cultivar-group) Os08g...
46
0.66
20 emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se...
46
0.66
21 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
22 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
23 gb|AC026413.5|AC026413 Homo sapiens chromosome 5 clone CTD-2030B...
46
0.66
24 emb|AL831873.1|HSM803197 Homo sapiens genomic DNA; cDNA DKFZp547...
46
0.66
25 dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
26 dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
27 dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
28 dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.66
29 dbj|AK110830.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.66
30 dbj|AK069520.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.66
31 gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5...
46
0.66
32 gb|AE005070.1| Halobacterium sp. NRC-1 section 101 of 170 of the...
46
0.66
33 emb|CT831593.1| Oryza sativa (indica cultivar-group) cDNA clone:...
44
2.6
34 gb|CP000454.1| Arthrobacter sp. FB24, complete genome
44
2.6
35 dbj|AK243083.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
44
2.6
36 ref|XM_001178595.1| PREDICTED: Strongylocentrotus purpuratus sim...
44
2.6
37 ref|XM_784570.2| PREDICTED: Strongylocentrotus purpuratus simila...
44
2.6
38 ref|NM_001060457.1| Oryza sativa (japonica cultivar-group) Os04g...
44
2.6
39 ref|NM_001057849.1| Oryza sativa (japonica cultivar-group) Os03g...
44
2.6
40 gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete ...
44
2.6
41 gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s...
44
2.6
42 ref|XM_001101445.1| PREDICTED: Macaca mulatta similar to Cytochr...
44
2.6
43 gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome...
44
2.6
44 gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom...
44
2.6
45 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.6
46 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.6
47 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.6
48 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.6
49 gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare str...
44
2.6
50 emb|AL022326.1|HS333H23 Human DNA sequence from clone RP3-333H23...
44
2.6
51 emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4,...
44
2.6
52 emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,...
44
2.6
53 gb|AC007824.5|AC007824 Drosophila melanogaster, chromosome 3R, r...
44
2.6
54 gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p...
44
2.6
55 dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
56 dbj|AK105231.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
57 dbj|AK105171.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
58 dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.6
59 emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa...
44
2.6
>dbj|AK243591.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J100083G23, full
insert sequence
Length = 2528
Score = 190 bits (96), Expect = 2e-44
Identities = 249/300 (83%)
Strand = Plus / Plus
Query: 1223 gctggaaaagaccggcgagcagagggagagggtgctggcggcggaggcggcggagctacg 1282
|||||| |||| || |||| |||||||| || | |||||||||||||||||| ||| ||
Sbjct: 1140 gctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcg 1199
Query: 1283 gagggccaaggccgcgctggaggaggggaacagggagcttgctcagaggttgcaggatgc 1342
| ||| || |||| ||||||||||| ||||| |||||| || | |||| ||||||| ||
Sbjct: 1200 ggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggc 1259
Query: 1343 ggagcacgtctcctccgctgttactctggttcgtgaggacgacatcgttgacgaggcaaa 1402
||||| ||||| | |||| ||| ||| ||||| ||| | ||| | ||||||||
Sbjct: 1260 agagcagacagcctccacggttaatctcgttatcgaggaggacgtggttaaggaggcaaa 1319
Query: 1403 ctacctgagggaggcgaacgatcggctgacgaggcagatcgagcagctacacagcgacca 1462
|||||||| ||| | ||||| |||||||| |||||||||||||||| ||| ||||||
Sbjct: 1320 atacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcacgccgacca 1379
Query: 1463 ctgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctccgccacga 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1380 ctgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctccgctacga 1439
Score = 133 bits (67), Expect = 4e-27
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 1608 agcaagagcatgagctaccgctccagcgagaaggccaaggagctcatgctccagtatggc 1667
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 1495 agcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggc 1554
Query: 1668 agcctcggcctcgacggctacgaccccgcgctcttctcgccgctcaacgactccatgtac 1727
| || ||||||||||||| ||||||| | ||||||| |||||| |||| ||| | |||
Sbjct: 1555 acccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctac 1614
Query: 1728 ggcgacggcga 1738
|||||||||||
Sbjct: 1615 ggcgacggcga 1625
Score = 103 bits (52), Expect = 3e-18
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 2000 ctcgtacgagagcacgccgctgtcgtcgtgcgaccggacgccgctgagcagcgtgacgac 2059
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1938 ctcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgac 1997
Score = 63.9 bits (32), Expect = 3e-06
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 894 aaggagctgtggctgtcgctcgtggagcgggagcagaggctggagctccggc 945
|||||||| |||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 655 aaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggc 706
Score = 52.0 bits (26), Expect = 0.011
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 678 cctcgtgctctgcctacgccggacgatgggctcagaattgtggcatcggatgatgaatat 737
||||||||||||||||| ||||| ||||| ||| | ||| | | ||| |||| |||| |
Sbjct: 400 cctcgtgctctgcctacaccggatgatggtctccggattctttcgtcgaatgaggaatgt 459
Query: 738 ctggaaaacgtgatccacagcgcgtcaatcggtgccggggacgatgagcc 787
|||| | |||||| ||| ||||||| |||| ||||||||||| |||||
Sbjct: 460 ttggagaccgtgattcacggcgcgtccgtcggagccggggacgacgagcc 509
Score = 50.1 bits (25), Expect = 0.042
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1014 gccgccgtggaggcgcggctcctggagctcaaggtcttgtcgctgcgtgaggagaac 1070
|||||||||||||||||| | |||||||| |||| | |||||||| |||||||||
Sbjct: 778 gccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaac 834
>ref|NM_001049944.1 | Oryza sativa (japonica cultivar-group) Os01g0580800 (Os01g0580800)
mRNA, complete cds
Length = 2343
Score = 190 bits (96), Expect = 2e-44
Identities = 249/300 (83%)
Strand = Plus / Plus
Query: 1223 gctggaaaagaccggcgagcagagggagagggtgctggcggcggaggcggcggagctacg 1282
|||||| |||| || |||| |||||||| || | |||||||||||||||||| ||| ||
Sbjct: 1161 gctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcg 1220
Query: 1283 gagggccaaggccgcgctggaggaggggaacagggagcttgctcagaggttgcaggatgc 1342
| ||| || |||| ||||||||||| ||||| |||||| || | |||| ||||||| ||
Sbjct: 1221 ggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggc 1280
Query: 1343 ggagcacgtctcctccgctgttactctggttcgtgaggacgacatcgttgacgaggcaaa 1402
||||| ||||| | |||| ||| ||| ||||| ||| | ||| | ||||||||
Sbjct: 1281 agagcagacagcctccacggttaatctcgttatcgaggaggacgtggttaaggaggcaaa 1340
Query: 1403 ctacctgagggaggcgaacgatcggctgacgaggcagatcgagcagctacacagcgacca 1462
|||||||| ||| | ||||| |||||||| |||||||||||||||| ||| ||||||
Sbjct: 1341 atacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcacgccgacca 1400
Query: 1463 ctgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctccgccacga 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1401 ctgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctccgctacga 1460
Score = 133 bits (67), Expect = 4e-27
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 1608 agcaagagcatgagctaccgctccagcgagaaggccaaggagctcatgctccagtatggc 1667
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 1516 agcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggc 1575
Query: 1668 agcctcggcctcgacggctacgaccccgcgctcttctcgccgctcaacgactccatgtac 1727
| || ||||||||||||| ||||||| | ||||||| |||||| |||| ||| | |||
Sbjct: 1576 acccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctac 1635
Query: 1728 ggcgacggcga 1738
|||||||||||
Sbjct: 1636 ggcgacggcga 1646
Score = 103 bits (52), Expect = 3e-18
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 2000 ctcgtacgagagcacgccgctgtcgtcgtgcgaccggacgccgctgagcagcgtgacgac 2059
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1959 ctcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgac 2018
Score = 63.9 bits (32), Expect = 3e-06
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 894 aaggagctgtggctgtcgctcgtggagcgggagcagaggctggagctccggc 945
|||||||| |||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 676 aaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggc 727
Score = 52.0 bits (26), Expect = 0.011
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 678 cctcgtgctctgcctacgccggacgatgggctcagaattgtggcatcggatgatgaatat 737
||||||||||||||||| ||||| ||||| ||| | ||| | | ||| |||| |||| |
Sbjct: 421 cctcgtgctctgcctacaccggatgatggtctccggattctttcgtcgaatgaggaatgt 480
Query: 738 ctggaaaacgtgatccacagcgcgtcaatcggtgccggggacgatgagcc 787
|||| | |||||| ||| ||||||| |||| ||||||||||| |||||
Sbjct: 481 ttggagaccgtgattcacggcgcgtccgtcggagccggggacgacgagcc 530
Score = 50.1 bits (25), Expect = 0.042
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1014 gccgccgtggaggcgcggctcctggagctcaaggtcttgtcgctgcgtgaggagaac 1070
|||||||||||||||||| | |||||||| |||| | |||||||| |||||||||
Sbjct: 799 gccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaac 855
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 167 bits (84), Expect = 3e-37
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 1395 gaggcaaactacctgagggaggcgaacgatcggctgacgaggcagatcgagcagctacac 1454
|||||||| |||||||| ||| | ||||| |||||||| |||||||||||||||| |||
Sbjct: 22491682 gaggcaaaatacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcac 22491623
Query: 1455 agcgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22491622 gccgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 22491563
Query: 1515 cgccacga 1522
||| ||||
Sbjct: 22491562 cgctacga 22491555
Score = 133 bits (67), Expect = 4e-27
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 1608 agcaagagcatgagctaccgctccagcgagaaggccaaggagctcatgctccagtatggc 1667
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 22491499 agcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggc 22491440
Query: 1668 agcctcggcctcgacggctacgaccccgcgctcttctcgccgctcaacgactccatgtac 1727
| || ||||||||||||| ||||||| | ||||||| |||||| |||| ||| | |||
Sbjct: 22491439 acccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctac 22491380
Query: 1728 ggcgacggcga 1738
|||||||||||
Sbjct: 22491379 ggcgacggcga 22491369
Score = 103 bits (52), Expect = 3e-18
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 2000 ctcgtacgagagcacgccgctgtcgtcgtgcgaccggacgccgctgagcagcgtgacgac 2059
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 22491056 ctcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgac 22490997
Score = 67.9 bits (34), Expect = 2e-07
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 1223 gctggaaaagaccggcgagcagagggagagggtgctggcggcggaggcggcggagctacg 1282
|||||| |||| || |||| |||||||| || | |||||||||||||||||| ||| ||
Sbjct: 22495214 gctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcg 22495155
Query: 1283 gagggccaaggccgcgctggaggaggggaacagggagcttgctcagaggttgcaggatgc 1342
| ||| || |||| ||||||||||| ||||| |||||| || | |||| ||||||| ||
Sbjct: 22495154 ggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggc 22495095
Query: 1343 ggagca 1348
|||||
Sbjct: 22495094 agagca 22495089
Score = 63.9 bits (32), Expect = 3e-06
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 894 aaggagctgtggctgtcgctcgtggagcgggagcagaggctggagctccggc 945
|||||||| |||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 22495699 aaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggc 22495648
Score = 50.1 bits (25), Expect = 0.042
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1014 gccgccgtggaggcgcggctcctggagctcaaggtcttgtcgctgcgtgaggagaac 1070
|||||||||||||||||| | |||||||| |||| | |||||||| |||||||||
Sbjct: 22495576 gccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaac 22495520
>dbj|AP003332.4 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1097D05
Length = 144879
Score = 167 bits (84), Expect = 3e-37
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 1395 gaggcaaactacctgagggaggcgaacgatcggctgacgaggcagatcgagcagctacac 1454
|||||||| |||||||| ||| | ||||| |||||||| |||||||||||||||| |||
Sbjct: 7419 gaggcaaaatacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcac 7360
Query: 1455 agcgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7359 gccgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 7300
Query: 1515 cgccacga 1522
||| ||||
Sbjct: 7299 cgctacga 7292
Score = 133 bits (67), Expect = 4e-27
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 1608 agcaagagcatgagctaccgctccagcgagaaggccaaggagctcatgctccagtatggc 1667
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 7236 agcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggc 7177
Query: 1668 agcctcggcctcgacggctacgaccccgcgctcttctcgccgctcaacgactccatgtac 1727
| || ||||||||||||| ||||||| | ||||||| |||||| |||| ||| | |||
Sbjct: 7176 acccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctac 7117
Query: 1728 ggcgacggcga 1738
|||||||||||
Sbjct: 7116 ggcgacggcga 7106
Score = 103 bits (52), Expect = 3e-18
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 2000 ctcgtacgagagcacgccgctgtcgtcgtgcgaccggacgccgctgagcagcgtgacgac 2059
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 6793 ctcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgac 6734
Score = 67.9 bits (34), Expect = 2e-07
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 1223 gctggaaaagaccggcgagcagagggagagggtgctggcggcggaggcggcggagctacg 1282
|||||| |||| || |||| |||||||| || | |||||||||||||||||| ||| ||
Sbjct: 10951 gctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcg 10892
Query: 1283 gagggccaaggccgcgctggaggaggggaacagggagcttgctcagaggttgcaggatgc 1342
| ||| || |||| ||||||||||| ||||| |||||| || | |||| ||||||| ||
Sbjct: 10891 ggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggc 10832
Query: 1343 ggagca 1348
|||||
Sbjct: 10831 agagca 10826
Score = 63.9 bits (32), Expect = 3e-06
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 894 aaggagctgtggctgtcgctcgtggagcgggagcagaggctggagctccggc 945
|||||||| |||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 11436 aaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggc 11385
Score = 50.1 bits (25), Expect = 0.042
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1014 gccgccgtggaggcgcggctcctggagctcaaggtcttgtcgctgcgtgaggagaac 1070
|||||||||||||||||| | |||||||| |||| | |||||||| |||||||||
Sbjct: 11313 gccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaac 11257
>dbj|AP003546.4 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0672C09
Length = 145655
Score = 167 bits (84), Expect = 3e-37
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 1395 gaggcaaactacctgagggaggcgaacgatcggctgacgaggcagatcgagcagctacac 1454
|||||||| |||||||| ||| | ||||| |||||||| |||||||||||||||| |||
Sbjct: 115820 gaggcaaaatacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcac 115761
Query: 1455 agcgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115760 gccgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctc 115701
Query: 1515 cgccacga 1522
||| ||||
Sbjct: 115700 cgctacga 115693
Score = 133 bits (67), Expect = 4e-27
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 1608 agcaagagcatgagctaccgctccagcgagaaggccaaggagctcatgctccagtatggc 1667
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 115637 agcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggc 115578
Query: 1668 agcctcggcctcgacggctacgaccccgcgctcttctcgccgctcaacgactccatgtac 1727
| || ||||||||||||| ||||||| | ||||||| |||||| |||| ||| | |||
Sbjct: 115577 acccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctac 115518
Query: 1728 ggcgacggcga 1738
|||||||||||
Sbjct: 115517 ggcgacggcga 115507
Score = 103 bits (52), Expect = 3e-18
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 2000 ctcgtacgagagcacgccgctgtcgtcgtgcgaccggacgccgctgagcagcgtgacgac 2059
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 115194 ctcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgac 115135
Score = 67.9 bits (34), Expect = 2e-07
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 1223 gctggaaaagaccggcgagcagagggagagggtgctggcggcggaggcggcggagctacg 1282
|||||| |||| || |||| |||||||| || | |||||||||||||||||| ||| ||
Sbjct: 119352 gctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcg 119293
Query: 1283 gagggccaaggccgcgctggaggaggggaacagggagcttgctcagaggttgcaggatgc 1342
| ||| || |||| ||||||||||| ||||| |||||| || | |||| ||||||| ||
Sbjct: 119292 ggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggc 119233
Query: 1343 ggagca 1348
|||||
Sbjct: 119232 agagca 119227
Score = 63.9 bits (32), Expect = 3e-06
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 894 aaggagctgtggctgtcgctcgtggagcgggagcagaggctggagctccggc 945
|||||||| |||||||||||| |||||||||||||| ||||| |||| ||||
Sbjct: 119837 aaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggc 119786
Score = 50.1 bits (25), Expect = 0.042
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1014 gccgccgtggaggcgcggctcctggagctcaaggtcttgtcgctgcgtgaggagaac 1070
|||||||||||||||||| | |||||||| |||| | |||||||| |||||||||
Sbjct: 119714 gccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaac 119658
>emb|AL022326.1 |HS333H23 Human DNA sequence from clone RP3-333H23 on chromosome 22q12.1-12.3
Contains the (possibly alternatively spliced) RPL3 gene
for 60S Ribosomal Protein L3 and the threefold
alternatively spliced gene for Synaptogyrin 1A, 1B and 1C
(SYNGR1A, SYBGRIB, SYNGR1C), both genes downstream of a
putative CpG island. Contains ESTs, an STS, GSSs, and a
ca repeat (D22S1155) polymorphism, complete sequence
Length = 122888
Score = 44.1 bits (22), Expect = 2.6
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1298 gctggaggaggggaacagggag 1319
||||||||||||||||||||||
Sbjct: 10441 gctggaggaggggaacagggag 10462
>emb|AL731744.6 |CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 190718
Score = 44.1 bits (22), Expect = 2.6
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1241 gcagagggagagggtgctggcggcgg 1266
||||||||||||||||| ||||||||
Sbjct: 128499 gcagagggagagggtgcgggcggcgg 128474
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 415,782,061
Number of extensions: 24416265
Number of successful extensions: 185583
Number of sequences better than 10.0: 59
Number of HSP's gapped: 185581
Number of HSP's successfully gapped: 92
Length of query: 2681
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2658
Effective length of database: 18,503,978,556
Effective search space: 49183575001848
Effective search space used: 49183575001848
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)