| Clone Name | FLbaf27i16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001068915.1| Oryza sativa (japonica cultivar-group) Os08g0540000 (Os08g0540000) mRNA, complete cds Length = 1487 Score = 934 bits (471), Expect = 0.0 Identities = 810/923 (87%) Strand = Plus / Plus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||| | ||| |||| |||||||||| || |||||||||||| |||| |||||| Sbjct: 204 gcgaggtggatgcggagggatgtgctgctggggctggcgctggggcagttcgtgtcgctg 263 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggtatcaatgcaccg 215 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 264 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggtatcaatgcaccg 323 Query: 216 acgtcacagtccctcttgaactacatccttcttgctcttgtctacggtggcatactcctc 275 || || ||||| || ||||||||||||||||| | ||| |||| || || |||||| || Sbjct: 324 acatctcagtctctgttgaactacatccttctctcccttatctatggaggtatactcatc 383 Query: 276 taccggagacagccgctcacgacaaaatggtactactacttgatccttggcattattgat 335 |||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 384 taccggagacagcccctcacgataaaatggtactactatttgatccttgggattattgac 443 Query: 336 gtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtgtgatg 395 ||||| || || ||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 444 gtggaagcgaattatatagttgtgaagtcttatcagtacacatctttgacaagcgtgatg 503 Query: 396 cttctggattgttggtcaattccatgtgtaattgttcttacttggatctttttgaagacc 455 || ||||||| ||||||||||| ||||| ||| ||||||| ||||| |||||||||||| Sbjct: 504 ctcttggattgctggtcaattccttgtgtgattattcttacatggatatttttgaagacc 563 Query: 456 aaatatggattcaggaagttctttggtgttggggtttgtgtggctggccttatattagta 515 || ||||| ||||||||||| | |||||||| ||||| |||||||| |||||||||||| Sbjct: 564 aagtatgggctcaggaagttcatcggtgttggagtttgcgtggctggacttatattagta 623 Query: 516 gtattttcggacgtccatgcttctgaccgagctaaaggacccaaacctttgaagggtgat 575 |||||||| || |||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 624 gtattttcagatgtccatgcctctgatcgagctaaaggacccaaccctttgaagggagat 683 Query: 576 ttgcttgtaattgttggctccatgctttatgcttgcagtaatgttacagaggaatatctg 635 ||||| ||||| |||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 684 ttgctcgtaatctttggttccatgctttatgcttgcagcaatgttacagaggagtacctg 743 Query: 636 gtcaagaagaacaaccgaattgagttgatggctatgttgggaatttttggagcagttatc 695 |||||||| | |||| |||||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 744 gtcaagaaaagcaacagaattgagttgatggcaatgttgggactttttggagctattatc 803 Query: 696 agtggcatacaaataagtgttctcgagcgagaagaacttcattcgatcaaatggaatgcc 755 ||||| |||||||||||| | || |||||| ||||||||||||| |||||||||||||| Sbjct: 804 agtggaatacaaataagtatacttgagcgaaaagaacttcattcaatcaaatggaatgct 863 Query: 756 ggcgcggtgttcccttttattggattcgcattggcaatgttcctgttttactcgactgta 815 ||||| ||| | |||||| ||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 864 ggcgcagtgcttccttttcttggattcgcattagcgatgttcctgttctactcaactgta 923 Query: 816 cctacggtgctgaagatttgcggggcaaccatgctaaatctctcactcctgacctcagac 875 ||||| || |||||||| || |||||||| ||||| || |||||||| ||||| ||||| Sbjct: 924 cctacagtactgaagatatgtggggcaacgatgctgaacctctcactgctgacttcagat 983 Query: 876 atgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttgactggatgtacttt 935 ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 984 atgtgggctgttctgatccgcatctttgcttaccatgagaaggttgactggatctacttc 1043 Query: 936 gttgcgtttgcctgcacagctgggggccttctggtctactcgtacaggagctccaaggag 995 ||||| || ||| ||||||| | ||||| || ||||||| |||| ||||||||||||| Sbjct: 1044 gttgccttcgccggcacagcggctggcctcctcatctactcatacaagagctccaaggag 1103 Query: 996 gccgatgacacggcgcaggtcgc 1018 || || || |||||||||||||| Sbjct: 1104 gcagaggagacggcgcaggtcgc 1126
>dbj|AK070813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073C13, full insert sequence Length = 1487 Score = 926 bits (467), Expect = 0.0 Identities = 809/923 (87%) Strand = Plus / Plus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||| | ||| |||| |||||||||| || |||||||||||| |||| |||||| Sbjct: 204 gcgaggtggatgcggagggatgtgctgctggggctggcgctggggcagttcgtgtcgctg 263 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggtatcaatgcaccg 215 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 264 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggtatcaatgcaccg 323 Query: 216 acgtcacagtccctcttgaactacatccttcttgctcttgtctacggtggcatactcctc 275 || || ||||| || ||||||||||||||||| | ||| |||| || || |||||| || Sbjct: 324 acatctcagtctctgttgaactacatccttctctcccttatctatggaggtatactcatc 383 Query: 276 taccggagacagccgctcacgacaaaatggtactactacttgatccttggcattattgat 335 |||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 384 taccggagacagcccctcacgataaaatggtactactatttgatccttgggattattgac 443 Query: 336 gtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtgtgatg 395 ||||| || || ||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 444 gtggaagcgaattatatagttgtgaagtcttatcagtacacatctttgacaagcgtgatg 503 Query: 396 cttctggattgttggtcaattccatgtgtaattgttcttacttggatctttttgaagacc 455 || ||||||| ||||||||||| ||||| ||| ||||||| ||||| |||||||||||| Sbjct: 504 ctcttggattgctggtcaattccttgtgtgattattcttacatggatatttttgaagacc 563 Query: 456 aaatatggattcaggaagttctttggtgttggggtttgtgtggctggccttatattagta 515 || ||||| ||||||||||| | |||||||| ||||| |||||||| |||||||||||| Sbjct: 564 aagtatgggctcaggaagttcatcggtgttggagtttgcgtggctggacttatattagta 623 Query: 516 gtattttcggacgtccatgcttctgaccgagctaaaggacccaaacctttgaagggtgat 575 |||||||| || |||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 624 gtattttcagatgtccatgcctctgatcgagctaaaggacccaaccctttgaagggagat 683 Query: 576 ttgcttgtaattgttggctccatgctttatgcttgcagtaatgttacagaggaatatctg 635 ||||| ||||| |||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 684 ttgctcgtaatctttggttccatgctttatgcttgcagcaatgttacagaggagtacctg 743 Query: 636 gtcaagaagaacaaccgaattgagttgatggctatgttgggaatttttggagcagttatc 695 |||||||| | |||| ||||||||||| |||| ||||||||| |||||||||| ||||| Sbjct: 744 gtcaagaaaagcaacagaattgagttggtggcaatgttgggactttttggagctattatc 803 Query: 696 agtggcatacaaataagtgttctcgagcgagaagaacttcattcgatcaaatggaatgcc 755 ||||| |||||||||||| | || |||||| ||||||||||||| |||||||||||||| Sbjct: 804 agtggaatacaaataagtatacttgagcgaaaagaacttcattcaatcaaatggaatgct 863 Query: 756 ggcgcggtgttcccttttattggattcgcattggcaatgttcctgttttactcgactgta 815 ||||| ||| | |||||| ||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 864 ggcgcagtgcttccttttcttggattcgcattagcgatgttcctgttctactcaactgta 923 Query: 816 cctacggtgctgaagatttgcggggcaaccatgctaaatctctcactcctgacctcagac 875 ||||| || |||||||| || |||||||| ||||| || |||||||| ||||| ||||| Sbjct: 924 cctacagtactgaagatatgtggggcaacgatgctgaacctctcactgctgacttcagat 983 Query: 876 atgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttgactggatgtacttt 935 ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 984 atgtgggctgttctgatccgcatctttgcttaccatgagaaggttgactggatctacttc 1043 Query: 936 gttgcgtttgcctgcacagctgggggccttctggtctactcgtacaggagctccaaggag 995 ||||| || ||| ||||||| | ||||| || ||||||| |||| ||||||||||||| Sbjct: 1044 gttgccttcgccggcacagcggctggcctcctcatctactcatacaagagctccaaggag 1103 Query: 996 gccgatgacacggcgcaggtcgc 1018 || || || |||||||||||||| Sbjct: 1104 gcagaggagacggcgcaggtcgc 1126
>ref|NM_001070184.1| Oryza sativa (japonica cultivar-group) Os09g0513200 (Os09g0513200) mRNA, complete cds Length = 960 Score = 371 bits (187), Expect = 5e-99 Identities = 442/527 (83%) Strand = Plus / Plus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||| Sbjct: 16 gcgaggtggctgcggcgggaggtgttcgtggggctcgcgctggggcagttcgtctcgctg 75 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggtatcaatgcaccg 215 |||||||||||||||||||||||||||||||||||||| |||||||| |||| || || Sbjct: 76 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggcgtcaacgcgcca 135 Query: 216 acgtcacagtccctcttgaactacatccttcttgctcttgtctacggtggcatactcctc 275 || || ||||| || |||| ||| |||||||||| ||||| || ||||| ||||| || Sbjct: 136 acttcgcagtctctgctgaattacgtccttcttgcgcttgtttatggtgggatactgatc 195 Query: 276 taccggagacagccgctcacgacaaaatggtactactacttgatccttggcattattgat 335 ||| | || || | || |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 196 tacagaaggcaacacctgacgattaaatggtactacttcttgatccttggcatcgttgat 255 Query: 336 gtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtgtgatg 395 || || ||||||||||| ||||| ||| |||||||||| ||||| || |||||||||||| Sbjct: 256 gtagaagctaactatattgttgtgaaggcttatcagtatacatccttaacgagtgtgatg 315 Query: 396 cttctggattgttggtcaattccatgtgtaattgttcttacttggatctttttgaagacc 455 || | ||||| ||| | || || ||||| ||| | || |||||| |||| |||||||| Sbjct: 316 ctcatcgattgctgggcgatcccgtgtgtcattctcctcacttgggtcttcttgaagaca 375 Query: 456 aaatatggattcaggaagttctttggtgttggggtttgtgtggctggccttatattagta 515 || |||||||| ||||||||| | ||||||| | |||||||||||||| ||||||| ||| Sbjct: 376 aagtatggattgaggaagttcatcggtgttgtgatttgtgtggctggcattatattggta 435 Query: 516 gtattttcggacgtccatgcttctgaccgagctaaaggacccaaacctttgaagggtgat 575 |||||||| || |||||||| ||||| |||| ||||||||||| || ||||| |||||| Sbjct: 436 gtattttctgatgtccatgcctctgatagagcaaaaggacccaaccccttgaaaggtgat 495 Query: 576 ttgcttgtaattgttggctccatgctttatgcttgcagtaatgttac 622 ||| |||| |||| ||| |||||||||||||| |||||||||||| Sbjct: 496 ttgtttgtcattgctggggccatgctttatgctgtcagtaatgttac 542 Score = 129 bits (65), Expect = 3e-26 Identities = 161/193 (83%) Strand = Plus / Plus Query: 826 tgaagatttgcggggcaaccatgctaaatctctcactcctgacctcagacatgtgggctg 885 ||||||| || || ||||| ||||| |||||||| || ||||||| ||||||||||||| Sbjct: 611 tgaagatatgtggtgcaactatgctcaatctctcccttttgacctcggacatgtgggctg 670 Query: 886 tcctgatccgcatcttcgcttaccatgagaaggttgactggatgtactttgttgcgtttg 945 | || ||||| |||||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 671 ttctaatccgtatcttcgcttaccatgagaaggttgattggatgtatttcgttgcttttg 730 Query: 946 cctgcacagctgggggccttctggtctactcgtacaggagctccaaggaggccgatgaca 1005 | |||| || | |||||| | ||||||| |||| | ||||||||| ||| || || | Sbjct: 731 ctggcacggcagctggccttgtcatctactcatacaagggctccaaggtggcggaggaga 790 Query: 1006 cggcgcaggtcgc 1018 ||||||||||||| Sbjct: 791 cggcgcaggtcgc 803
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| |||||||||||||||||||||||||| || |||||||| ||||||| |||||| Sbjct: 27023075 gttgtgaagtcttatcagtacacatctttgacaagcgtgatgctcttggattgctggtca 27023016 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 ||||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 27023015 attccttgtgtgattattcttacatggatatttttgaagaccaagtatgggctcaggaag 27022956 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | |||||||| ||||| |||||||| |||||||||||||||||||| || |||||| Sbjct: 27022955 ttcatcggtgttggagtttgcgtggctggacttatattagtagtattttcagatgtccat 27022896 Query: 534 gcttctgaccgagcta 549 || ||||| ||||||| Sbjct: 27022895 gcctctgatcgagcta 27022880 Score = 135 bits (68), Expect = 5e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||| | ||| |||| |||||||||| || |||||||||||| |||| |||||| Sbjct: 27024710 gcgaggtggatgcggagggatgtgctgctggggctggcgctggggcagttcgtgtcgctg 27024651 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggt 203 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27024650 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggt 27024603 Score = 101 bits (51), Expect = 6e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 837 ggggcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgc 896 |||||||| ||||| || |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 27021240 ggggcaacgatgctgaacctctcactgctgacttcagatatgtgggctgttctgatccgc 27021181 Query: 897 atcttcgcttaccatgagaaggt 919 ||||| ||||||||||||||||| Sbjct: 27021180 atctttgcttaccatgagaaggt 27021158 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| ||||||||||| |||||||| ||||| |||| |||||||||||||||| Sbjct: 27022753 aaggacccaaccctttgaagggagatttgctcgtaatctttggttccatgctttatgctt 27022694 Query: 610 gcagtaatgttacagagg 627 |||| ||||||||||||| Sbjct: 27022693 gcagcaatgttacagagg 27022676 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 633 ctggtcaagaagaacaaccgaattgagttgatggctatgttgggaatttttggagcagtt 692 ||||||||||| | |||| |||||||||||||||| ||||||||| |||||||||| || Sbjct: 27022519 ctggtcaagaaaagcaacagaattgagttgatggcaatgttgggactttttggagctatt 27022460 Query: 693 atcagtggcatacaaat 709 |||||||| |||||||| Sbjct: 27022459 atcagtggaatacaaat 27022443 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 200 aggtatcaatgcaccgacgtcacagtccctcttgaactacatccttcttgctcttgtcta 259 |||||||||||||||||| || ||||| || ||||||||||||||||| | ||| |||| Sbjct: 27023958 aggtatcaatgcaccgacatctcagtctctgttgaactacatccttctctcccttatcta 27023899 Query: 260 cggtggcatactcctctaccggagacagccgctcacg 296 || || |||||| |||||||||||||||| |||||| Sbjct: 27023898 tggaggtatactcatctaccggagacagcccctcacg 27023862 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 768 ccttttattggattcgcattggcaatgttcctgttttactcgactgtacctacggtgctg 827 |||||| ||||||||||||| || ||||||||||| ||||| ||||||||||| || ||| Sbjct: 27021460 ccttttcttggattcgcattagcgatgttcctgttctactcaactgtacctacagtactg 27021401 Query: 828 aag 830 ||| Sbjct: 27021400 aag 27021398 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 299 aaaatggtactactacttgatccttggcattattgatgtgga 340 ||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 27023259 aaaatggtactactatttgatccttgggattattgacgtgga 27023218 Score = 58.0 bits (29), Expect = 9e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 720 gagcgagaagaacttcattcgatcaaatggaatgccggcgc 760 |||||| ||||||||||||| |||||||||||||| ||||| Sbjct: 27022209 gagcgaaaagaacttcattcaatcaaatggaatgctggcgc 27022169 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 980 caggagctccaaggaggccgatgacacggcgcaggtcgc 1018 |||||||||||||||||| || || |||||||||||||| Sbjct: 27020921 caggagctccaaggaggcagaggagacggcgcaggtcgc 27020883 Score = 44.1 bits (22), Expect = 1.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggt 919 |||||||||||||| || || |||| |||||| | |||||||||||||| Sbjct: 26991323 tcagacatgtgggcagttctcatccccatctttccgtaccatgagaaggt 26991274
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| |||||||||||||||||||||||||| || |||||||| ||||||| |||||| Sbjct: 124475 gttgtgaagtcttatcagtacacatctttgacaagcgtgatgctcttggattgctggtca 124416 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 ||||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 124415 attccttgtgtgattattcttacatggatatttttgaagaccaagtatgggctcaggaag 124356 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | |||||||| ||||| |||||||| |||||||||||||||||||| || |||||| Sbjct: 124355 ttcatcggtgttggagtttgcgtggctggacttatattagtagtattttcagatgtccat 124296 Query: 534 gcttctgaccgagcta 549 || ||||| ||||||| Sbjct: 124295 gcctctgatcgagcta 124280 Score = 135 bits (68), Expect = 5e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||| | ||| |||| |||||||||| || |||||||||||| |||| |||||| Sbjct: 126110 gcgaggtggatgcggagggatgtgctgctggggctggcgctggggcagttcgtgtcgctg 126051 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggt 203 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 126050 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggt 126003 Score = 101 bits (51), Expect = 6e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 837 ggggcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgc 896 |||||||| ||||| || |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 122640 ggggcaacgatgctgaacctctcactgctgacttcagatatgtgggctgttctgatccgc 122581 Query: 897 atcttcgcttaccatgagaaggt 919 ||||| ||||||||||||||||| Sbjct: 122580 atctttgcttaccatgagaaggt 122558 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| ||||||||||| |||||||| ||||| |||| |||||||||||||||| Sbjct: 124153 aaggacccaaccctttgaagggagatttgctcgtaatctttggttccatgctttatgctt 124094 Query: 610 gcagtaatgttacagagg 627 |||| ||||||||||||| Sbjct: 124093 gcagcaatgttacagagg 124076 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 633 ctggtcaagaagaacaaccgaattgagttgatggctatgttgggaatttttggagcagtt 692 ||||||||||| | |||| |||||||||||||||| ||||||||| |||||||||| || Sbjct: 123919 ctggtcaagaaaagcaacagaattgagttgatggcaatgttgggactttttggagctatt 123860 Query: 693 atcagtggcatacaaat 709 |||||||| |||||||| Sbjct: 123859 atcagtggaatacaaat 123843 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 200 aggtatcaatgcaccgacgtcacagtccctcttgaactacatccttcttgctcttgtcta 259 |||||||||||||||||| || ||||| || ||||||||||||||||| | ||| |||| Sbjct: 125358 aggtatcaatgcaccgacatctcagtctctgttgaactacatccttctctcccttatcta 125299 Query: 260 cggtggcatactcctctaccggagacagccgctcacg 296 || || |||||| |||||||||||||||| |||||| Sbjct: 125298 tggaggtatactcatctaccggagacagcccctcacg 125262 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 768 ccttttattggattcgcattggcaatgttcctgttttactcgactgtacctacggtgctg 827 |||||| ||||||||||||| || ||||||||||| ||||| ||||||||||| || ||| Sbjct: 122860 ccttttcttggattcgcattagcgatgttcctgttctactcaactgtacctacagtactg 122801 Query: 828 aag 830 ||| Sbjct: 122800 aag 122798 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 299 aaaatggtactactacttgatccttggcattattgatgtgga 340 ||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 124659 aaaatggtactactatttgatccttgggattattgacgtgga 124618 Score = 58.0 bits (29), Expect = 9e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 720 gagcgagaagaacttcattcgatcaaatggaatgccggcgc 760 |||||| ||||||||||||| |||||||||||||| ||||| Sbjct: 123609 gagcgaaaagaacttcattcaatcaaatggaatgctggcgc 123569 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 980 caggagctccaaggaggccgatgacacggcgcaggtcgc 1018 |||||||||||||||||| || || |||||||||||||| Sbjct: 122321 caggagctccaaggaggcagaggagacggcgcaggtcgc 122283 Score = 44.1 bits (22), Expect = 1.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggt 919 |||||||||||||| || || |||| |||||| | |||||||||||||| Sbjct: 92723 tcagacatgtgggcagttctcatccccatctttccgtaccatgagaaggt 92674
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||| Sbjct: 163251 gcgaggtggctgcggcgggaggtgttcgtggggctcgcgctggggcagttcgtctcgctg 163192 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggta 204 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 163191 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggta 163143 Score = 127 bits (64), Expect = 1e-25 Identities = 157/188 (83%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| ||| |||||||||| ||||| || |||||||||||||| | ||||| ||| | Sbjct: 161760 gttgtgaaggcttatcagtatacatccttaacgagtgtgatgctcatcgattgctgggcg 161701 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 || || ||||| ||| | || |||||| |||| |||||||| || |||||||| |||||| Sbjct: 161700 atcccgtgtgtcattctcctcacttgggtcttcttgaagacaaagtatggattgaggaag 161641 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | ||||||| | |||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 161640 ttcatcggtgttgtgatttgtgtggctggcattatattggtagtattttctgatgtccat 161581 Query: 534 gcttctga 541 || ||||| Sbjct: 161580 gcctctga 161573 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 840 gcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatc 899 ||||| ||||| |||||||| || ||||||| |||||||||||||| || ||||| ||| Sbjct: 160174 gcaactatgctcaatctctcccttttgacctcggacatgtgggctgttctaatccgtatc 160115 Query: 900 ttcgcttaccatgagaaggt 919 |||||||||||||||||||| Sbjct: 160114 ttcgcttaccatgagaaggt 160095 Score = 67.9 bits (34), Expect = 9e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| || ||||| ||||||||| |||| |||| ||| |||||||||||||| Sbjct: 161280 aaggacccaaccccttgaaaggtgatttgtttgtcattgctggggccatgctttatgctg 161221 Query: 610 gcagtaatgttacagagg 627 |||||||||||| |||| Sbjct: 161220 tcagtaatgttaccgagg 161203 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 300 aaatggtactactacttgatccttggcattattgatgtggaggctaactatat 352 ||||||||||||| ||||||||||||||| ||||||| || ||||||||||| Sbjct: 161933 aaatggtactacttcttgatccttggcatcgttgatgtagaagctaactatat 161881 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 652 gaattgagttgatggctatgttgggaatttttggagcagttatcagtggcatacaaat 709 |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||||| Sbjct: 160903 gaattgaggtgatggcaatgctgggcgtttttggagcagttataagtggtatacaaat 160846
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||| Sbjct: 7443 gcgaggtggctgcggcgggaggtgttcgtggggctcgcgctggggcagttcgtctcgctg 7384 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggta 204 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 7383 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggta 7335 Score = 127 bits (64), Expect = 1e-25 Identities = 157/188 (83%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| ||| |||||||||| ||||| || |||||||||||||| | ||||| ||| | Sbjct: 5952 gttgtgaaggcttatcagtatacatccttaacgagtgtgatgctcatcgattgctgggcg 5893 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 || || ||||| ||| | || |||||| |||| |||||||| || |||||||| |||||| Sbjct: 5892 atcccgtgtgtcattctcctcacttgggtcttcttgaagacaaagtatggattgaggaag 5833 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | ||||||| | |||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 5832 ttcatcggtgttgtgatttgtgtggctggcattatattggtagtattttctgatgtccat 5773 Query: 534 gcttctga 541 || ||||| Sbjct: 5772 gcctctga 5765 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 840 gcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatc 899 ||||| ||||| |||||||| || ||||||| |||||||||||||| || ||||| ||| Sbjct: 4366 gcaactatgctcaatctctcccttttgacctcggacatgtgggctgttctaatccgtatc 4307 Query: 900 ttcgcttaccatgagaaggt 919 |||||||||||||||||||| Sbjct: 4306 ttcgcttaccatgagaaggt 4287 Score = 67.9 bits (34), Expect = 9e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| || ||||| ||||||||| |||| |||| ||| |||||||||||||| Sbjct: 5472 aaggacccaaccccttgaaaggtgatttgtttgtcattgctggggccatgctttatgctg 5413 Query: 610 gcagtaatgttacagagg 627 |||||||||||| |||| Sbjct: 5412 tcagtaatgttaccgagg 5395 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 300 aaatggtactactacttgatccttggcattattgatgtggaggctaactatat 352 ||||||||||||| ||||||||||||||| ||||||| || ||||||||||| Sbjct: 6125 aaatggtactacttcttgatccttggcatcgttgatgtagaagctaactatat 6073 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 652 gaattgagttgatggctatgttgggaatttttggagcagttatcagtggcatacaaat 709 |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||||| Sbjct: 5095 gaattgaggtgatggcaatgctgggcgtttttggagcagttataagtggtatacaaat 5038
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||| Sbjct: 19680176 gcgaggtggctgcggcgggaggtgttcgtggggctcgcgctggggcagttcgtctcgctg 19680117 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggta 204 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19680116 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggta 19680068 Score = 127 bits (64), Expect = 1e-25 Identities = 157/188 (83%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| ||| |||||||||| ||||| || |||||||||||||| | ||||| ||| | Sbjct: 19678685 gttgtgaaggcttatcagtatacatccttaacgagtgtgatgctcatcgattgctgggcg 19678626 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 || || ||||| ||| | || |||||| |||| |||||||| || |||||||| |||||| Sbjct: 19678625 atcccgtgtgtcattctcctcacttgggtcttcttgaagacaaagtatggattgaggaag 19678566 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | ||||||| | |||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 19678565 ttcatcggtgttgtgatttgtgtggctggcattatattggtagtattttctgatgtccat 19678506 Query: 534 gcttctga 541 || ||||| Sbjct: 19678505 gcctctga 19678498 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 840 gcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatc 899 ||||| ||||| |||||||| || ||||||| |||||||||||||| || ||||| ||| Sbjct: 19677099 gcaactatgctcaatctctcccttttgacctcggacatgtgggctgttctaatccgtatc 19677040 Query: 900 ttcgcttaccatgagaaggt 919 |||||||||||||||||||| Sbjct: 19677039 ttcgcttaccatgagaaggt 19677020 Score = 67.9 bits (34), Expect = 9e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| || ||||| ||||||||| |||| |||| ||| |||||||||||||| Sbjct: 19678205 aaggacccaaccccttgaaaggtgatttgtttgtcattgctggggccatgctttatgctg 19678146 Query: 610 gcagtaatgttacagagg 627 |||||||||||| |||| Sbjct: 19678145 tcagtaatgttaccgagg 19678128 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 300 aaatggtactactacttgatccttggcattattgatgtggaggctaactatat 352 ||||||||||||| ||||||||||||||| ||||||| || ||||||||||| Sbjct: 19678858 aaatggtactacttcttgatccttggcatcgttgatgtagaagctaactatat 19678806 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 652 gaattgagttgatggctatgttgggaatttttggagcagttatcagtggcatacaaat 709 |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||||| Sbjct: 19677828 gaattgaggtgatggcaatgctgggcgtttttggagcagttataagtggtatacaaat 19677771
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 96 gcgaggtggcttcggcgggaggtgctgctggccctcgcgctggggcagctcgtctcgctg 155 ||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||| Sbjct: 25862 gcgaggtggctgcggcgggaggtgttcgtggggctcgcgctggggcagttcgtctcgctg 25803 Query: 156 ctcatcacctccaccggcttctcctcctccgagctcgcgcgccgaggta 204 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 25802 ctcatcacctccaccggcttctcctcctccgagctcgcccgccgaggta 25754 Score = 127 bits (64), Expect = 1e-25 Identities = 157/188 (83%) Strand = Plus / Minus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||| ||| |||||||||| ||||| || |||||||||||||| | ||||| ||| | Sbjct: 24371 gttgtgaaggcttatcagtatacatccttaacgagtgtgatgctcatcgattgctgggcg 24312 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaaatatggattcaggaag 473 || || ||||| ||| | || |||||| |||| |||||||| || |||||||| |||||| Sbjct: 24311 atcccgtgtgtcattctcctcacttgggtcttcttgaagacaaagtatggattgaggaag 24252 Query: 474 ttctttggtgttggggtttgtgtggctggccttatattagtagtattttcggacgtccat 533 ||| | ||||||| | |||||||||||||| ||||||| ||||||||||| || |||||| Sbjct: 24251 ttcatcggtgttgtgatttgtgtggctggcattatattggtagtattttctgatgtccat 24192 Query: 534 gcttctga 541 || ||||| Sbjct: 24191 gcctctga 24184 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 840 gcaaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatc 899 ||||| ||||| |||||||| || ||||||| |||||||||||||| || ||||| ||| Sbjct: 22785 gcaactatgctcaatctctcccttttgacctcggacatgtgggctgttctaatccgtatc 22726 Query: 900 ttcgcttaccatgagaaggt 919 |||||||||||||||||||| Sbjct: 22725 ttcgcttaccatgagaaggt 22706 Score = 67.9 bits (34), Expect = 9e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 550 aaggacccaaacctttgaagggtgatttgcttgtaattgttggctccatgctttatgctt 609 |||||||||| || ||||| ||||||||| |||| |||| ||| |||||||||||||| Sbjct: 23891 aaggacccaaccccttgaaaggtgatttgtttgtcattgctggggccatgctttatgctg 23832 Query: 610 gcagtaatgttacagagg 627 |||||||||||| |||| Sbjct: 23831 tcagtaatgttaccgagg 23814 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 300 aaatggtactactacttgatccttggcattattgatgtggaggctaactatat 352 ||||||||||||| ||||||||||||||| ||||||| || ||||||||||| Sbjct: 24544 aaatggtactacttcttgatccttggcatcgttgatgtagaagctaactatat 24492 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 652 gaattgagttgatggctatgttgggaatttttggagcagttatcagtggcatacaaat 709 |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||||| Sbjct: 23514 gaattgaggtgatggcaatgctgggcgtttttggagcagttataagtggtatacaaat 23457
>gb|DQ245344.1| Zea mays clone 14631 mRNA sequence Length = 847 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Plus Query: 119 gctgctggccctcgcgctggggcagctcgtctcgctgctcatcacctccaccggcttctc 178 |||||||| |||||||||||| ||| |||||||||||||||||||| || |||||||| | Sbjct: 366 gctgctgggcctcgcgctgggccagttcgtctcgctgctcatcaccgcccccggcttcgc 425 Query: 179 ctcctccgagctcgcgcgccgaggta 204 ||||||||| ||||| |||||||||| Sbjct: 426 ctcctccgaactcgcccgccgaggta 451
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 846 atgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgct 905 ||||||||||| || || |||||||||||||||||| ||||| | || |||||||||||| Sbjct: 41296 atgctaaatctgtctcttctgacctcagacatgtggtctgtcttaattcgcatcttcgct 41355 Query: 906 taccatgagaaggt 919 |||||||||||||| Sbjct: 41356 taccatgagaaggt 41369
>ref|NM_001061665.1| Oryza sativa (japonica cultivar-group) Os05g0299500 (Os05g0299500) mRNA, partial cds Length = 1563 Score = 89.7 bits (45), Expect = 2e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 134 gctggggcagctcgtctcgctgctcatcacctccaccggcttctcctcctccgagctcgc 193 |||||| || |||||||| || ||| ||||| ||||||||||| |||||||||||||| | Sbjct: 125 gctgggccaactcgtctccctcctcgtcaccgccaccggcttcgcctcctccgagctctc 184 Query: 194 gcgccgaggtatcaatgcaccgacgtcacagtc 226 |||||||||||||||| || ||||||||||| Sbjct: 185 ccgccgaggtatcaatgtgccaacgtcacagtc 217 Score = 58.0 bits (29), Expect = 9e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 333 gatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtgtg 392 ||||| ||||| || ||| | ||||||||| |||| |||||||||||| |||| || || Sbjct: 324 gatgtagaggcaaattatctagttgtcaaggcttaccagtacacatctctgacaagcgtt 383 Query: 393 atgcttctggattgttggtcaattccatgtgtaattgttcttacttggatctttttgaag 452 |||||||| ||||| ||| | ||||| ||| || | ||||| ||||| ||||||||| Sbjct: 384 atgcttcttgattgctgggctattcctgctgtgatattccttacatggatgtttttgaag 443 Query: 453 accaa 457 ||||| Sbjct: 444 accaa 448 Score = 58.0 bits (29), Expect = 9e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 841 caaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatct 900 |||| |||||||| || ||| | || |||||||||||||||||| | || ||||| | | Sbjct: 832 caacaatgctaaacctttcattgctaacctcagacatgtgggctattctcatccgtttgt 891 Query: 901 tcgcttaccatgagaaggttgactggatgtact 933 | || |||||||| ||||| ||||||||||||| Sbjct: 892 ttgcctaccatgaaaaggtcgactggatgtact 924
>dbj|AK073649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047A18, full insert sequence Length = 1564 Score = 89.7 bits (45), Expect = 2e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 134 gctggggcagctcgtctcgctgctcatcacctccaccggcttctcctcctccgagctcgc 193 |||||| || |||||||| || ||| ||||| ||||||||||| |||||||||||||| | Sbjct: 126 gctgggccaactcgtctccctcctcgtcaccgccaccggcttcgcctcctccgagctctc 185 Query: 194 gcgccgaggtatcaatgcaccgacgtcacagtc 226 |||||||||||||||| || ||||||||||| Sbjct: 186 ccgccgaggtatcaatgtgccaacgtcacagtc 218 Score = 58.0 bits (29), Expect = 9e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 333 gatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtgtg 392 ||||| ||||| || ||| | ||||||||| |||| |||||||||||| |||| || || Sbjct: 325 gatgtagaggcaaattatctagttgtcaaggcttaccagtacacatctctgacaagcgtt 384 Query: 393 atgcttctggattgttggtcaattccatgtgtaattgttcttacttggatctttttgaag 452 |||||||| ||||| ||| | ||||| ||| || | ||||| ||||| ||||||||| Sbjct: 385 atgcttcttgattgctgggctattcctgctgtgatattccttacatggatgtttttgaag 444 Query: 453 accaa 457 ||||| Sbjct: 445 accaa 449 Score = 58.0 bits (29), Expect = 9e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 841 caaccatgctaaatctctcactcctgacctcagacatgtgggctgtcctgatccgcatct 900 |||| |||||||| || ||| | || |||||||||||||||||| | || ||||| | | Sbjct: 833 caacaatgctaaacctttcattgctaacctcagacatgtgggctattctcatccgtttgt 892 Query: 901 tcgcttaccatgagaaggttgactggatgtact 933 | || |||||||| ||||| ||||||||||||| Sbjct: 893 ttgcctaccatgaaaaggtcgactggatgtact 925
>gb|AC189647.1| Brassica rapa subsp. pekinensis clone KBrS009G24, complete sequence Length = 116407 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 854 tctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatga 913 ||||||||| || || |||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 111975 tctctcactactcacatcagacatgtgggcggttctgatccgcattttcgcttaccatga 111916 Query: 914 gaaggtt 920 ||||||| Sbjct: 111915 gaaggtt 111909
>gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1583_A05, complete sequence Length = 126987 Score = 67.9 bits (34), Expect = 9e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 134 gctggggcagctcgtctcgctgctcatcacctccaccggcttctcctcctccgagctcgc 193 |||||| || |||||||| || ||| ||||| ||||||||||| |||||||||||||| | Sbjct: 49611 gctgggccaactcgtctccctcctcgtcaccgccaccggcttcgcctcctccgagctctc 49670 Query: 194 gcgccgaggt 203 ||||||||| Sbjct: 49671 ccgccgaggt 49680 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||||||| |||| |||||||||||| |||| || || |||||||| ||||| ||| | Sbjct: 51694 gttgtcaaggcttaccagtacacatctctgacaagcgttatgcttcttgattgctgggct 51753 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaa 457 ||||| ||| || | ||||| ||||| |||||||||||||| Sbjct: 51754 attcctgctgtgatattccttacatggatgtttttgaagaccaa 51797
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 67.9 bits (34), Expect = 9e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 134 gctggggcagctcgtctcgctgctcatcacctccaccggcttctcctcctccgagctcgc 193 |||||| || |||||||| || ||| ||||| ||||||||||| |||||||||||||| | Sbjct: 105569 gctgggccaactcgtctccctcctcgtcaccgccaccggcttcgcctcctccgagctctc 105628 Query: 194 gcgccgaggt 203 ||||||||| Sbjct: 105629 ccgccgaggt 105638 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||||||| |||| |||||||||||| |||| || || |||||||| ||||| ||| | Sbjct: 107652 gttgtcaaggcttaccagtacacatctctgacaagcgttatgcttcttgattgctgggct 107711 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaa 457 ||||| ||| || | ||||| ||||| |||||||||||||| Sbjct: 107712 attcctgctgtgatattccttacatggatgtttttgaagaccaa 107755
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 67.9 bits (34), Expect = 9e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 134 gctggggcagctcgtctcgctgctcatcacctccaccggcttctcctcctccgagctcgc 193 |||||| || |||||||| || ||| ||||| ||||||||||| |||||||||||||| | Sbjct: 13271995 gctgggccaactcgtctccctcctcgtcaccgccaccggcttcgcctcctccgagctctc 13272054 Query: 194 gcgccgaggt 203 ||||||||| Sbjct: 13272055 ccgccgaggt 13272064 Score = 56.0 bits (28), Expect = 3e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 354 gttgtcaagtcttatcagtacacatctttgacgagtgtgatgcttctggattgttggtca 413 ||||||||| |||| |||||||||||| |||| || || |||||||| ||||| ||| | Sbjct: 13274078 gttgtcaaggcttaccagtacacatctctgacaagcgttatgcttcttgattgctgggct 13274137 Query: 414 attccatgtgtaattgttcttacttggatctttttgaagaccaa 457 ||||| ||| || | ||||| ||||| |||||||||||||| Sbjct: 13274138 attcctgctgtgatattccttacatggatgtttttgaagaccaa 13274181
>ref|NM_115796.2| Arabidopsis thaliana unknown protein (AT3G59340) mRNA, complete cds Length = 1325 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 855 ctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 |||||| | ||||| |||||||||||||| || |||||||||| ||||| ||||| ||| Sbjct: 900 ctctcattgctgacatcagacatgtgggcggttttgatccgcattttcgcataccacgag 959 Query: 915 aaggttga 922 |||||||| Sbjct: 960 aaggttga 967
>gb|AY064664.1| Arabidopsis thaliana putative protein (At3g59340; F25L23_200) mRNA, complete cds Length = 1041 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 855 ctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 |||||| | ||||| |||||||||||||| || |||||||||| ||||| ||||| ||| Sbjct: 784 ctctcattgctgacatcagacatgtgggcggttttgatccgcattttcgcataccacgag 843 Query: 915 aaggttga 922 |||||||| Sbjct: 844 aaggttga 851
>gb|AF370505.1|AF370505 Arabidopsis thaliana putative protein (F25L23_200) mRNA, complete cds Length = 1324 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 855 ctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 |||||| | ||||| |||||||||||||| || |||||||||| ||||| ||||| ||| Sbjct: 900 ctctcattgctgacatcagacatgtgggcggttttgatccgcattttcgcataccacgag 959 Query: 915 aaggttga 922 |||||||| Sbjct: 960 aaggttga 967
>dbj|AB060646.1| Arabidopsis thaliana Anm3 mRNA for anthocyanin-related membrane protein 3, complete cds, isolate:A3 Length = 1002 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 855 ctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 |||||| | ||||| |||||||||||||| || |||||||||| ||||| ||||| ||| Sbjct: 784 ctctcattgctgacatcagacatgtgggcggttttgatccgcattttcgcataccacgag 843 Query: 915 aaggttga 922 |||||||| Sbjct: 844 aaggttga 851
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 865 tgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 ||||||| |||||||||||||| || |||| |||||||||||||||||| Sbjct: 31514779 tgacctcggacatgtgggctgttctaatccttatcttcgcttaccatgag 31514828
>emb|AL356014.1|ATF25L23 Arabidopsis thaliana DNA chromosome 3, BAC clone F25L23 Length = 114080 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 855 ctctcactcctgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 |||||| | ||||| |||||||||||||| || |||||||||| ||||| ||||| ||| Sbjct: 56611 ctctcattgctgacatcagacatgtgggcggttttgatccgcattttcgcataccacgag 56552 Query: 915 aaggtt 920 |||||| Sbjct: 56551 aaggtt 56546
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 865 tgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 ||||||| |||||||||||||| || |||| |||||||||||||||||| Sbjct: 150176 tgacctcggacatgtgggctgttctaatccttatcttcgcttaccatgag 150225
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 865 tgacctcagacatgtgggctgtcctgatccgcatcttcgcttaccatgag 914 ||||||| |||||||||||||| || |||| |||||||||||||||||| Sbjct: 5339 tgacctcggacatgtgggctgttctaatccttatcttcgcttaccatgag 5388
>gb|BT028937.1| Arabidopsis thaliana At3g59320 mRNA, complete cds Length = 1020 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 331 ttgatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtg 390 ||||||||||||| |||| | ||||||||||| | | |||| ||||||| |||| ||| Sbjct: 254 ttgatgtggaggcgaactttctcgttgtcaaggcatttcagaacacatcgatgactagta 313 Query: 391 tgatgcttctggattg 406 | ||||| |||||||| Sbjct: 314 tcatgctactggattg 329
>dbj|AK227436.1| Arabidopsis thaliana mRNA for anthocyanin-related membrane protein 2, complete cds, clone: RAFL14-08-E02 Length = 2234 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 331 ttgatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtg 390 ||||||||||||| |||| | ||||||||||| | | |||| ||||||| |||| ||| Sbjct: 1276 ttgatgtggaggcgaactttctcgttgtcaaggcatttcagaacacatcgatgactagta 1335 Query: 391 tgatgcttctggattg 406 | ||||| |||||||| Sbjct: 1336 tcatgctactggattg 1351 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||||||||||||||| ||||||||| || | |||||| || |||||||| Sbjct: 1815 tcagacatgtgggctgttttgatccgcacttttggttaccacgaaaaggttga 1867
>ref|NM_115794.3| Arabidopsis thaliana unknown protein (AT3G59320) mRNA, complete cds Length = 1202 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 331 ttgatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtg 390 ||||||||||||| |||| | ||||||||||| | | |||| ||||||| |||| ||| Sbjct: 254 ttgatgtggaggcgaactttctcgttgtcaaggcatttcagaacacatcgatgactagta 313 Query: 391 tgatgcttctggattg 406 | ||||| |||||||| Sbjct: 314 tcatgctactggattg 329
>gb|BT009729.1| Arabidopsis thaliana At3g59320 gene, complete cds Length = 1020 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 331 ttgatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtg 390 ||||||||||||| |||| | ||||||||||| | | |||| ||||||| |||| ||| Sbjct: 254 ttgatgtggaggcgaactttctcgttgtcaaggcatttcagaacacatcgatgactagta 313 Query: 391 tgatgcttctggattg 406 | ||||| |||||||| Sbjct: 314 tcatgctactggattg 329 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||||||||||||||| ||||||||| || | |||||| || |||||||| Sbjct: 793 tcagacatgtgggctgttttgatccgcacttttggttaccacgaaaaggttga 845
>ref|NM_022954.1| Rattus norvegicus fat tumor suppressor homolog 2 (Drosophila) (Fath2), mRNA dbj|AB011527.1| Rattus norvegicus mRNA for MEGF1, complete cds Length = 14560 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 tgaactacatccttcttgctcttg 255 |||||||||||||||||||||||| Sbjct: 13969 tgaactacatccttcttgctcttg 13946
>dbj|AB060645.1| Arabidopsis thaliana Anm2 mRNA for anthocyanin-related membrane protein 2, complete cds, isolate:A2 Length = 1020 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 331 ttgatgtggaggctaactatatcgttgtcaagtcttatcagtacacatctttgacgagtg 390 ||||||||||||| |||| | ||||||||||| | | |||| ||||||| |||| ||| Sbjct: 254 ttgatgtggaggcgaactttctcgttgtcaaggcatttcagaacacatcgatgactagta 313 Query: 391 tgatgcttctggattg 406 | ||||| |||||||| Sbjct: 314 tcatgctactggattg 329
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence Length = 163126 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1047 gatgaggaatctggaattcagaa 1069 ||||||||||||||||||||||| Sbjct: 108832 gatgaggaatctggaattcagaa 108854
>gb|AC090568.5| Homo sapiens chromosome 8, clone RP11-69I13, complete sequence Length = 166398 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1047 gatgaggaatctggaattcagaa 1069 ||||||||||||||||||||||| Sbjct: 162712 gatgaggaatctggaattcagaa 162690
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 464 attcaggaagttctttggtgtt 485 |||||||||||||||||||||| Sbjct: 154037 attcaggaagttctttggtgtt 154016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ggggacggggaaggcggcggtg 90 |||||||||||||||||||||| Sbjct: 30268207 ggggacggggaaggcggcggtg 30268186
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226538 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 464 attcaggaagttctttggtgtt 485 |||||||||||||||||||||| Sbjct: 184452 attcaggaagttctttggtgtt 184473
>emb|AJ333578.1|HSA333578 Homo sapiens genomic sequence surrounding NotI site, clone NL3-CJ2RS Length = 741 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 cggggaaggcggcggtggctgc 95 |||||||||||||||||||||| Sbjct: 8 cggggaaggcggcggtggctgc 29
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ggggacggggaaggcggcggtg 90 |||||||||||||||||||||| Sbjct: 164520 ggggacggggaaggcggcggtg 164499
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ggggacggggaaggcggcggtg 90 |||||||||||||||||||||| Sbjct: 18103 ggggacggggaaggcggcggtg 18082
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 atctttttgaagaccaaatat 461 ||||||||||||||||||||| Sbjct: 85329 atctttttgaagaccaaatat 85309
>ref|XM_369408.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06056.4) partial mRNA Length = 1017 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gcagctcgtctcgctgctcat 160 ||||||||||||||||||||| Sbjct: 630 gcagctcgtctcgctgctcat 650
>ref|NM_202729.1| Arabidopsis thaliana unknown protein (AT3G59310) mRNA, complete cds Length = 1761 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 982 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 1034
>ref|NM_115793.4| Arabidopsis thaliana unknown protein (AT3G59310) mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 892 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 944
>gb|AY093128.1| Arabidopsis thaliana putative protein (At3g59310) mRNA, complete cds Length = 1228 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 806 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 858
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 gagggggacggggaaggcggcggtg 90 |||||||||||||| |||||||||| Sbjct: 36274 gagggggacggggacggcggcggtg 36298
>emb|AL357522.10| Human DNA sequence from clone RP11-685G11 on chromosome 6 Contains two CpG islands, complete sequence Length = 124506 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 ccaaatatggattcaggaagt 474 ||||||||||||||||||||| Sbjct: 97902 ccaaatatggattcaggaagt 97882
>gb|AC012327.6|AC012327 Arabidopsis thaliana chromosome 3 BAC T14A11 genomic sequence, complete sequence Length = 86585 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtgtgatgcttctggattg 406 ||||||||||||||||||||| Sbjct: 53306 gagtgtgatgcttctggattg 53326
>gb|AC078962.30| Homo sapiens 12 BAC RP11-338E21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162644 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 854 tctctcactcctgacctcaga 874 ||||||||||||||||||||| Sbjct: 1307 tctctcactcctgacctcaga 1287
>gb|AC136977.4| Homo sapiens 12 BAC RP11-439H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33795 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 854 tctctcactcctgacctcaga 874 ||||||||||||||||||||| Sbjct: 33102 tctctcactcctgacctcaga 33082
>emb|BX824681.1|CNS0A6PR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZC01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1319 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 982 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 1034
>emb|BX824359.1|CNS0A6Q3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1273 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 892 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 944
>emb|BX537330.9| Zebrafish DNA sequence from clone DKEYP-104A11 in linkage group 17, complete sequence Length = 99858 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 947 ctgcacagctgggggccttct 967 ||||||||||||||||||||| Sbjct: 49526 ctgcacagctgggggccttct 49546
>dbj|AB060644.1| Arabidopsis thaliana Anm1 mRNA for anthocyanin-related membrane protein 1, complete cds, isolate:A1 Length = 999 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 870 tcagacatgtgggctgtcctgatccgcatcttcgcttaccatgagaaggttga 922 ||||| ||||||||||| ||||||||| || | |||||| ||||||||||| Sbjct: 790 tcagatatgtgggctgttttgatccgcacttttggttaccacgagaaggttga 842 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 214,193,418 Number of extensions: 11449223 Number of successful extensions: 412877 Number of sequences better than 10.0: 53 Number of HSP's gapped: 412871 Number of HSP's successfully gapped: 104 Length of query: 1366 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1343 Effective length of database: 18,503,978,556 Effective search space: 24850843200708 Effective search space used: 24850843200708 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)