ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf17e15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0517900:Os05g0517900 199 2e-51
2Os03g0246000:Os03g0246000 34 0.11
3AK099938:Os09g0476100 25 2.2
4AK120311:Os03g0401900 30 2.8
5AK107526:Os05g0498200 29 3.6
6AK108178:Os02g0679700 29 4.8
7Os05g0185600:Os05g0185600 28 6.2
8AK111981:Os10g0410700 28 8.1
9AK111906:Os10g0410700 28 8.1

>Os05g0517900:Os05g0517900 |
          Length = 185
 Score =  199 bits (506), Expect = 2e-51
 Identities = 105/186 (56%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
 Frame = +3

Query: 87  MDPTDQSPEEMYSVWALLPEPVXXXXXXXXXXXXTAHGGAAFEPHATVLGAMXXXXXXXX 266
           MD  DQSP+E+YSVWAL PEPV             AHGG AFEPHATV+GA+        
Sbjct: 1   MDAGDQSPKEVYSVWALPPEPVRARLRGVMAGLRAAHGGPAFEPHATVVGAIRLRRSAAV 60

Query: 267 XXXXXXXXXXXPYTARTAAIGRYG-----VNLLLEPTREVMATSDHCRAHFDYQRPAPYM 431
                      PYTAR   + R       + LLLEPT EV+  SDHC  HF Y+R  PYM
Sbjct: 61  EALRAAAAGVRPYTARVVGVARGDFFYQCIYLLLEPTPEVVEASDHCCGHFGYERSTPYM 120

Query: 432 PHLSLLYGDHLTEEEMAAARKKAGEMDKGIFGLQFEISELALYKTDPKDKSLESWELVEL 611
           PH+SLLYGD LT+EE   ARKK  E+DK I GLQFEISELALY+TD +DKSLESWELVE+
Sbjct: 121 PHVSLLYGD-LTDEEKEVARKKVEEIDKEICGLQFEISELALYRTDTEDKSLESWELVEI 179

Query: 612 CHLQNK 629
           CHL+ K
Sbjct: 180 CHLERK 185



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>Os03g0246000:Os03g0246000 |
          Length = 278

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +2

Query: 434 ASEPPVWRSPDGGGDGS-CKEEGRGDGQGNIWVA--VRDIRARALQNGSEGQELG 589
           A++PP   +P GGGDGS    +G G G G  W    +R  R RA      G  LG
Sbjct: 200 ATDPPPTTTPSGGGDGSGAAADGSGAGDGGGWRERWIRRRRRRAAWMRRSGGGLG 254



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>AK099938:Os09g0476100 |
          Length = 604

 Score = 24.6 bits (52), Expect(2) = 2.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 217 HTPPSSEPCVSAAQPP 264
           H PP  +P V+AA PP
Sbjct: 129 HLPPQPQPPVAAAPPP 144



 Score = 23.9 bits (50), Expect(2) = 2.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 27  PPEIRLRARQRGAPASPSTGMDPTDQSPEEMY--SVWALLPEPV 152
           PP  + + +Q+   A PS    P  + PE+++   V A+ P PV
Sbjct: 78  PPPPQQQQQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPPAPV 121



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>AK120311:Os03g0401900 |
          Length = 141

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +2

Query: 464 DGGGDGSCKEEGR---GDGQGNIWVAVRDI 544
           +GGG G+CK+EG    GDG G  W+ VR +
Sbjct: 62  EGGGTGACKDEGMDEDGDG-GARWMWVRTV 90



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>AK107526:Os05g0498200 |
          Length = 196

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 443 PPVWRSPDGGGDGSCKEEGRGDGQGNIW 526
           PP+  +  GGG G C   G   G+  +W
Sbjct: 153 PPIIPAVPGGGGGGCSGSGSSSGRRGVW 180



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>AK108178:Os02g0679700 |
          Length = 281

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +1

Query: 214 NHTPPSS--EPCVSAAQPPSRRYEPR 285
           +H PPSS  EP   AA+PP+ R  PR
Sbjct: 245 HHPPPSSRREPVAPAARPPAPRTPPR 270



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>Os05g0185600:Os05g0185600 |
          Length = 1366

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 470 GGDGSCKEEGRGDGQGNIWVAVRDI--RARALQNGSEGQELGVVGIG 604
           GG  S +++  G G G +W+  +DI      L NG +G   G  G G
Sbjct: 227 GGSTSVEKDYGGGGGGVVWLFAKDIMMNGTILANGGDGGTKGGGGSG 273



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>AK111981:Os10g0410700 |
          Length = 298

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 521 IWVAVRDIRARALQNGSEGQELGV 592
           +W+A  D R +AL+N  EG+EL +
Sbjct: 242 VWLASADARLKALRNIEEGEELRI 265



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>AK111906:Os10g0410700 |
          Length = 298

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 521 IWVAVRDIRARALQNGSEGQELGV 592
           +W+A  D R +AL+N  EG+EL +
Sbjct: 242 VWLASADARLKALRNIEEGEELRI 265


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,355,543
Number of extensions: 477809
Number of successful extensions: 2398
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2379
Number of HSP's successfully gapped: 10
Length of query: 285
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 185
Effective length of database: 11,395,755
Effective search space: 2108214675
Effective search space used: 2108214675
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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