| Clone Name | FLbaf12j07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059346.1| Oryza sativa (japonica cultivar-group) Os04g0429500 (Os04g0429500) mRNA, complete cds Length = 2850 Score = 202 bits (102), Expect = 3e-48 Identities = 485/610 (79%), Gaps = 2/610 (0%) Strand = Plus / Plus Query: 534 ttgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaat 593 |||||||||||| |||||| |||||||| ||||| |||||||||||||||||||| | Sbjct: 1377 ttgcaactatgatattggcacatgttggggacaggaggttggttgggtctatggatcact 1436 Query: 594 gacagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgtt 653 ||||||||||| ||||||||||| ||||| || ||| |||||||| ||| | ||| | Sbjct: 1437 aacagaagacatattgaccggacagcggatacacgcgatgggttggagatccgtattgat 1496 Query: 654 ggacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgac 713 || ||| | ||||| |||||| |||| | || |||| || ||||| ||| || | || Sbjct: 1497 ggtaaccgaaccacccgcattcatgggctccgcgccgattggaggaccagcctgcctaac 1556 Query: 714 ccagttcaagagatgggcaacaggggt-tctggagatactcatcagccggaacagcccta 772 |||||||||||||||||||| || |||| ||||| ||||||||||||||| ||| | Sbjct: 1557 tcagttcaagagatgggcaactggccaatctg-agataatcatcagccggaacaacccaa 1615 Query: 773 tcctcggcaccatcttccaacgcctccaactccggcaatgccttggctatctcatcgtcg 832 | |||| ||||| ||| | |||||| || |||||||||| |||| ||| || |||||| Sbjct: 1616 ttctcgcaaccatgttcaagcgcctcaaattccggcaatgtcttgcctacctgatcgtcc 1675 Query: 833 aggcgtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgcc 892 | |||||| |||| |||||||| ||||| ||||||| | | |||||||||| ||| Sbjct: 1676 ttgggtggcctctgagagcgccttttgagctatgctatggattgttgggaccttattgca 1735 Query: 893 ttctcacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtag 952 | ||||||||||| ||||||||||||| |||||| || || ||||| || |||| ||| Sbjct: 1736 tactcacaaaccaatccttcttgccaaaggcatcagaagatggtttcagcgtcccgttag 1795 Query: 953 ctctattcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctg 1012 | |||||| | || ||| |||| |||| |||||||||| || |||||||||||| | Sbjct: 1796 ccctattcatatcctataacacatacaacttcatggagtacatggcgtgcgggctctccg 1855 Query: 1013 cccgcgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcc 1072 |||| || ||||||||||| || ||||||||||| |||| ||||| ||| |||||| | Sbjct: 1856 cccgtgcatggtggaacaatcataggatgcaacggatcatctcggtctctgcctggacac 1915 Query: 1073 tcgccttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtca 1132 | || || || |||||| |||||||| | |||| ||||| || || || || ||||||| Sbjct: 1916 tagcatttcttaccgtgctcctcaagtccttaggcctctccgaaactgtttttgaggtca 1975 Query: 1133 cccgcaagga 1142 || ||||||| Sbjct: 1976 ccggcaagga 1985 Score = 143 bits (72), Expect = 2e-30 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| Sbjct: 895 agggtgtcagctgtgatgaccaacgcaccgatcatgctgaacatggactgcgacatgttt 954 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 | |||||||| |||| || ||| || ||||||||||| || ||||||||||||||||| Sbjct: 955 gtgaacaatccccaggccgtcctccatgcgatgtgcctgctgctggggttcgacgacgag 1014 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatccc 234 | ||||||||||||||| | ||| |||| ||||||| | ||||||||||||||| Sbjct: 1015 gccagcagcgggttcgtccaggcgccgcagagattctacgacgccctcaaggacgatcca 1074 Query: 235 tttggcaaccagatg 249 ||||| ||||||||| Sbjct: 1075 tttgggaaccagatg 1089
>ref|NM_001059347.1| Oryza sativa (japonica cultivar-group) Os04g0429600 (Os04g0429600) mRNA, complete cds Length = 1920 Score = 194 bits (98), Expect = 7e-46 Identities = 164/185 (88%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 51 ctgacaagggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgac 110 ||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 973 ctgacgagggtgtcagccgtgatgaccaacgcaccgatcatgctgaacgtggactgcgac 1032 Query: 111 atgttcgccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgac 168 |||||||| ||| |||| ||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 1033 atgttcgcgaacgatccccaggtcgtcctccacgcgatgtgcctgctgctggggttcgac 1092 Query: 169 gacgagatccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggac 228 ||||||||| |||||||||||| || ||||| |||| |||||||| | |||||||||| Sbjct: 1093 gacgagatctccagcgggttcgttcaggtgccgcagagtttctacggcgacctcaaggac 1152 Query: 229 gatcc 233 ||||| Sbjct: 1153 gatcc 1157 Score = 109 bits (55), Expect = 3e-20 Identities = 136/163 (83%) Strand = Plus / Plus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 ||||||||| ||||||||||||||| |||||||||||||| || || ||||||||||| | Sbjct: 1190 ttggttgggcctatggatcaatgaccgaagacattttgactgggcagcggatccatgcag 1249 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 | ||||||| ||| || |||||| ||| | ||||| ||||||||||| || || || | Sbjct: 1250 caggttggagatctgcaaagttggaaaccgaaccaccagcattcttgggctgcgcaccaa 1309 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaac 734 | || ||||| || || | ||||||||||||||||||||||| Sbjct: 1310 cgggtggaccagcttgcctaacccagttcaagagatgggcaac 1352 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1103 tagggctctctgagaccgtgttcgaggtcacccgcaagga 1142 |||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 1544 taggcctctccgagactgtgttcgaggtcacccgtaagga 1583
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 190 bits (96), Expect = 1e-44 Identities = 159/179 (88%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 112542 agggtgtcagccgtgatgaccaacgcaccgatcatgctgaacgtggactgcgacatgttc 112483 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 || ||| |||| ||||||| ||| |||||||||||||| || ||||||||||||||||| Sbjct: 112482 gcgaacgatccccaggtcgtcctccacgcgatgtgcctgctgctggggttcgacgacgag 112423 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatcc 233 ||| |||||||||||| || ||||| |||| |||||||| | ||||||||||||||| Sbjct: 112422 atctccagcgggttcgttcaggtgccgcagagtttctacggcgacctcaaggacgatcc 112364 Score = 143 bits (72), Expect = 2e-30 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| Sbjct: 105639 agggtgtcagctgtgatgaccaacgcaccgatcatgctgaacatggactgcgacatgttt 105580 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 | |||||||| |||| || ||| || ||||||||||| || ||||||||||||||||| Sbjct: 105579 gtgaacaatccccaggccgtcctccatgcgatgtgcctgctgctggggttcgacgacgag 105520 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatccc 234 | ||||||||||||||| | ||| |||| ||||||| | ||||||||||||||| Sbjct: 105519 gccagcagcgggttcgtccaggcgccgcagagattctacgacgccctcaaggacgatcca 105460 Query: 235 tttggcaaccagatg 249 ||||| ||||||||| Sbjct: 105459 tttgggaaccagatg 105445 Score = 129 bits (65), Expect = 4e-26 Identities = 280/349 (80%), Gaps = 2/349 (0%) Strand = Plus / Minus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| | ||||||||||| ||||||||||| ||||| || ||| Sbjct: 104603 ttggttgggtctatggatcactaacagaagacatattgaccggacagcggatacacgcga 104544 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 |||||||| ||| | ||| ||| ||| | ||||| |||||| |||| | || |||| Sbjct: 104543 tgggttggagatccgtattgatggtaaccgaaccacccgcattcatgggctccgcgccga 104484 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggt-tctggagata 750 || ||||| ||| || | || |||||||||||||||||||| || |||| ||||| Sbjct: 104483 ttggaggaccagcctgcctaactcagttcaagagatgggcaactggccaatctg-agata 104425 Query: 751 ctcatcagccggaacagccctatcctcggcaccatcttccaacgcctccaactccggcaa 810 ||||||||||||||| ||| || |||| ||||| ||| | |||||| || |||||||| Sbjct: 104424 atcatcagccggaacaacccaattctcgcaaccatgttcaagcgcctcaaattccggcaa 104365 Query: 811 tgccttggctatctcatcgtcgaggcgtggcccgtgagggcgcctttcgagctgtgctat 870 || |||| ||| || |||||| | |||||| |||| |||||||| ||||| |||||| Sbjct: 104364 tgtcttgcctacctgatcgtccttgggtggcctctgagagcgccttttgagctatgctat 104305 Query: 871 gcactattgggacctttctgccttctcacaaaccagtccttcttgccaa 919 | | | |||||||||| ||| | ||||||||||| ||||||||||||| Sbjct: 104304 ggattgttgggaccttattgcatactcacaaaccaatccttcttgccaa 104256 Score = 109 bits (55), Expect = 3e-20 Identities = 136/163 (83%) Strand = Plus / Minus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 ||||||||| ||||||||||||||| |||||||||||||| || || ||||||||||| | Sbjct: 111155 ttggttgggcctatggatcaatgaccgaagacattttgactgggcagcggatccatgcag 111096 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 | ||||||| ||| || |||||| ||| | ||||| ||||||||||| || || || | Sbjct: 111095 caggttggagatctgcaaagttggaaaccgaaccaccagcattcttgggctgcgcaccaa 111036 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaac 734 | || ||||| || || | ||||||||||||||||||||||| Sbjct: 111035 cgggtggaccagcttgcctaacccagttcaagagatgggcaac 110993 Score = 97.6 bits (49), Expect = 1e-16 Identities = 130/157 (82%) Strand = Plus / Minus Query: 986 tggagtacaaggagtgcgggctctctgcccgcgcctggtggaacaaccacaggatgcaac 1045 ||||||||| ||| || |||||||||| || |||||||||||||||||||| ||||||| Sbjct: 110575 tggagtacatggaatgtgggctctctgtacgtgcctggtggaacaaccacagaatgcaac 110516 Query: 1046 gcatcacctcggcctccgcctggctcctcgccttcctcaccgtgatcctcaagacactag 1105 | |||| || ||||| || ||||| || || || | || ||| |||||||||| ||| Sbjct: 110515 ggatcatttcagcctctgcatggctactagcattttttactgtgctcctcaagaccatag 110456 Query: 1106 ggctctctgagaccgtgttcgaggtcacccgcaagga 1142 | ||||| ||||| ||||||||||||||||| ||||| Sbjct: 110455 gcctctccgagactgtgttcgaggtcacccgtaagga 110419 Score = 87.7 bits (44), Expect = 1e-13 Identities = 137/168 (81%) Strand = Plus / Minus Query: 975 ataccacttgatggagtacaaggagtgcgggctctctgcccgcgcctggtggaacaacca 1034 |||| |||| |||||||||| || |||||||||||| ||||| || ||||||||||| || Sbjct: 104088 atacaacttcatggagtacatggcgtgcgggctctccgcccgtgcatggtggaacaatca 104029 Query: 1035 caggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctcaccgtgatcct 1094 ||||||||||| |||| ||||| ||| |||||| || || || || |||||| |||| Sbjct: 104028 taggatgcaacggatcatctcggtctctgcctggacactagcatttcttaccgtgctcct 103969 Query: 1095 caagacactagggctctctgagaccgtgttcgaggtcacccgcaagga 1142 |||| | |||| ||||| || || || || ||||||||| ||||||| Sbjct: 103968 caagtccttaggcctctccgaaactgtttttgaggtcaccggcaagga 103921
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 190 bits (96), Expect = 1e-44 Identities = 159/179 (88%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 21299068 agggtgtcagccgtgatgaccaacgcaccgatcatgctgaacgtggactgcgacatgttc 21299009 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 || ||| |||| ||||||| ||| |||||||||||||| || ||||||||||||||||| Sbjct: 21299008 gcgaacgatccccaggtcgtcctccacgcgatgtgcctgctgctggggttcgacgacgag 21298949 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatcc 233 ||| |||||||||||| || ||||| |||| |||||||| | ||||||||||||||| Sbjct: 21298948 atctccagcgggttcgttcaggtgccgcagagtttctacggcgacctcaaggacgatcc 21298890 Score = 143 bits (72), Expect = 2e-30 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| Sbjct: 21292165 agggtgtcagctgtgatgaccaacgcaccgatcatgctgaacatggactgcgacatgttt 21292106 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 | |||||||| |||| || ||| || ||||||||||| || ||||||||||||||||| Sbjct: 21292105 gtgaacaatccccaggccgtcctccatgcgatgtgcctgctgctggggttcgacgacgag 21292046 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatccc 234 | ||||||||||||||| | ||| |||| ||||||| | ||||||||||||||| Sbjct: 21292045 gccagcagcgggttcgtccaggcgccgcagagattctacgacgccctcaaggacgatcca 21291986 Query: 235 tttggcaaccagatg 249 ||||| ||||||||| Sbjct: 21291985 tttgggaaccagatg 21291971 Score = 129 bits (65), Expect = 4e-26 Identities = 280/349 (80%), Gaps = 2/349 (0%) Strand = Plus / Minus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| | ||||||||||| ||||||||||| ||||| || ||| Sbjct: 21291129 ttggttgggtctatggatcactaacagaagacatattgaccggacagcggatacacgcga 21291070 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 |||||||| ||| | ||| ||| ||| | ||||| |||||| |||| | || |||| Sbjct: 21291069 tgggttggagatccgtattgatggtaaccgaaccacccgcattcatgggctccgcgccga 21291010 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggt-tctggagata 750 || ||||| ||| || | || |||||||||||||||||||| || |||| ||||| Sbjct: 21291009 ttggaggaccagcctgcctaactcagttcaagagatgggcaactggccaatctg-agata 21290951 Query: 751 ctcatcagccggaacagccctatcctcggcaccatcttccaacgcctccaactccggcaa 810 ||||||||||||||| ||| || |||| ||||| ||| | |||||| || |||||||| Sbjct: 21290950 atcatcagccggaacaacccaattctcgcaaccatgttcaagcgcctcaaattccggcaa 21290891 Query: 811 tgccttggctatctcatcgtcgaggcgtggcccgtgagggcgcctttcgagctgtgctat 870 || |||| ||| || |||||| | |||||| |||| |||||||| ||||| |||||| Sbjct: 21290890 tgtcttgcctacctgatcgtccttgggtggcctctgagagcgccttttgagctatgctat 21290831 Query: 871 gcactattgggacctttctgccttctcacaaaccagtccttcttgccaa 919 | | | |||||||||| ||| | ||||||||||| ||||||||||||| Sbjct: 21290830 ggattgttgggaccttattgcatactcacaaaccaatccttcttgccaa 21290782 Score = 109 bits (55), Expect = 3e-20 Identities = 136/163 (83%) Strand = Plus / Minus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 ||||||||| ||||||||||||||| |||||||||||||| || || ||||||||||| | Sbjct: 21297681 ttggttgggcctatggatcaatgaccgaagacattttgactgggcagcggatccatgcag 21297622 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 | ||||||| ||| || |||||| ||| | ||||| ||||||||||| || || || | Sbjct: 21297621 caggttggagatctgcaaagttggaaaccgaaccaccagcattcttgggctgcgcaccaa 21297562 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaac 734 | || ||||| || || | ||||||||||||||||||||||| Sbjct: 21297561 cgggtggaccagcttgcctaacccagttcaagagatgggcaac 21297519 Score = 97.6 bits (49), Expect = 1e-16 Identities = 130/157 (82%) Strand = Plus / Minus Query: 986 tggagtacaaggagtgcgggctctctgcccgcgcctggtggaacaaccacaggatgcaac 1045 ||||||||| ||| || |||||||||| || |||||||||||||||||||| ||||||| Sbjct: 21297101 tggagtacatggaatgtgggctctctgtacgtgcctggtggaacaaccacagaatgcaac 21297042 Query: 1046 gcatcacctcggcctccgcctggctcctcgccttcctcaccgtgatcctcaagacactag 1105 | |||| || ||||| || ||||| || || || | || ||| |||||||||| ||| Sbjct: 21297041 ggatcatttcagcctctgcatggctactagcattttttactgtgctcctcaagaccatag 21296982 Query: 1106 ggctctctgagaccgtgttcgaggtcacccgcaagga 1142 | ||||| ||||| ||||||||||||||||| ||||| Sbjct: 21296981 gcctctccgagactgtgttcgaggtcacccgtaagga 21296945 Score = 87.7 bits (44), Expect = 1e-13 Identities = 137/168 (81%) Strand = Plus / Minus Query: 975 ataccacttgatggagtacaaggagtgcgggctctctgcccgcgcctggtggaacaacca 1034 |||| |||| |||||||||| || |||||||||||| ||||| || ||||||||||| || Sbjct: 21290614 atacaacttcatggagtacatggcgtgcgggctctccgcccgtgcatggtggaacaatca 21290555 Query: 1035 caggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctcaccgtgatcct 1094 ||||||||||| |||| ||||| ||| |||||| || || || || |||||| |||| Sbjct: 21290554 taggatgcaacggatcatctcggtctctgcctggacactagcatttcttaccgtgctcct 21290495 Query: 1095 caagacactagggctctctgagaccgtgttcgaggtcacccgcaagga 1142 |||| | |||| ||||| || || || || ||||||||| ||||||| Sbjct: 21290494 caagtccttaggcctctccgaaactgtttttgaggtcaccggcaagga 21290447
>tpg|BK000085.1| TPA_exp: Oryza sativa (indica cultivar-group) cellulose synthase-like H2 gene, complete cds Length = 4907 Score = 143 bits (72), Expect = 2e-30 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 57 agggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacatgttc 116 ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| Sbjct: 2491 agggtgtcagctgtgatgaccaacgcaccgatcatgctgaacatggactgcgacatgttt 2550 Query: 117 gccaacaatccgcaggtcgccctacacgcgatgtgcctcct--tggggttcgacgacgag 174 | |||||||| |||| || ||| || ||||||||||| || ||||||||||||||||| Sbjct: 2551 gtgaacaatccccaggccgtcctccatgcgatgtgcctgctgctggggttcgacgacgag 2610 Query: 175 atccacagcgggttcgtccaagtgccacagaagttctacggtggcctcaaggacgatccc 234 | ||||||||||||||| | ||| |||| ||||||| | ||||||||||||||| Sbjct: 2611 gccagcagcgggttcgtccaggcgccgcagagattctacgacgccctcaaggacgatcca 2670 Query: 235 tttggcaaccagatg 249 ||||| ||||||||| Sbjct: 2671 tttgggaaccagatg 2685 Score = 129 bits (65), Expect = 4e-26 Identities = 280/349 (80%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| | ||||||||||| ||||||||||| ||||| || ||| Sbjct: 3527 ttggttgggtctatggatcactaacagaagacatattgaccggacagcggatacacgcga 3586 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 |||||||| ||| | ||| ||| ||| | ||||| |||||| |||| | || |||| Sbjct: 3587 tgggttggagatccgtattgatggtaaccgaaccacccgcattcatgggctccgcgccga 3646 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggt-tctggagata 750 || ||||| ||| || | || |||||||||||||||||||| || |||| ||||| Sbjct: 3647 ttggaggaccagcctgcctaactcagttcaagagatgggcaactggccaatctg-agata 3705 Query: 751 ctcatcagccggaacagccctatcctcggcaccatcttccaacgcctccaactccggcaa 810 ||||||||||||||| ||| || |||| ||||| ||| | |||||| || |||||||| Sbjct: 3706 atcatcagccggaacaacccaattctcgcaaccatgttcaagcgcctcaaattccggcaa 3765 Query: 811 tgccttggctatctcatcgtcgaggcgtggcccgtgagggcgcctttcgagctgtgctat 870 || |||| ||| || |||||| | |||||| |||| |||||||| ||||| |||||| Sbjct: 3766 tgtcttgcctacctgatcgtccttgggtggcctctgagagcgccttttgagctatgctat 3825 Query: 871 gcactattgggacctttctgccttctcacaaaccagtccttcttgccaa 919 | | | |||||||||| ||| | ||||||||||| ||||||||||||| Sbjct: 3826 ggattgttgggaccttattgcatactcacaaaccaatccttcttgccaa 3874 Score = 87.7 bits (44), Expect = 1e-13 Identities = 137/168 (81%) Strand = Plus / Plus Query: 975 ataccacttgatggagtacaaggagtgcgggctctctgcccgcgcctggtggaacaacca 1034 |||| |||| |||||||||| || |||||||||||| ||||| || ||||||||||| || Sbjct: 4042 atacaacttcatggagtacatggcgtgcgggctctccgcccgtgcatggtggaacaatca 4101 Query: 1035 caggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctcaccgtgatcct 1094 ||||||||||| |||| ||||| ||| |||||| || || || || |||||| |||| Sbjct: 4102 taggatgcaacggatcatctcggtctctgcctggacactagcatttcttaccgtgctcct 4161 Query: 1095 caagacactagggctctctgagaccgtgttcgaggtcacccgcaagga 1142 |||| | |||| ||||| || || || || ||||||||| ||||||| Sbjct: 4162 caagtccttaggcctctccgaaactgtttttgaggtcaccggcaagga 4209
>emb|CT832770.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA209A22, full insert sequence Length = 2396 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1314 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 1373 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 1374 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 1433 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 | | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 1434 aaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 1493 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || |||| ||||||||||| ||||| | ||| ||| Sbjct: 1494 cagttgaagagatgggcatcaggttttttggaaatactcatcagtcggaataacccaatc 1553 Query: 775 ctc 777 ||| Sbjct: 1554 ctc 1556 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 1616 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 1675 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 1676 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 1735 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 1736 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 1795 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 1796 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 1855 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 1856 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1915 Query: 1137 caa 1139 ||| Sbjct: 1916 caa 1918 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 31 aggctggtgccatgaatgttctgacaagggtgtcagccgtgatgaccaacgctcccatca 90 ||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||| Sbjct: 817 aggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattca 876 Query: 91 tgctgaatgtggactgcgacatgtt 115 |||| || | |||||||||||||| Sbjct: 877 tgctaaacctagactgcgacatgtt 901 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1104 ggctgctttcaccgcagaaaagtcatttacggcatg 1139
>ref|NM_001070919.1| Oryza sativa (japonica cultivar-group) Os10g0341700 (Os10g0341700) mRNA, complete cds Length = 2658 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1355 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 1414 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 1415 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 1474 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 || | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 1475 gaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 1534 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| ||| Sbjct: 1535 cagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatc 1594 Query: 775 ctc 777 ||| Sbjct: 1595 ctc 1597 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 1657 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 1716 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 1717 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 1776 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 1777 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 1836 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 1837 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 1896 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 1897 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1956 Query: 1137 caa 1139 ||| Sbjct: 1957 caa 1959 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 31 aggctggtgccatgaatgttctgacaagggtgtcagccgtgatgaccaacgctcccatca 90 ||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||| Sbjct: 858 aggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattca 917 Query: 91 tgctgaatgtggactgcgacatgtt 115 |||| || | |||||||||||||| Sbjct: 918 tgctaaacctagactgcgacatgtt 942 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1145 ggctgctttcaccgcagaaaagtcatttacggcatg 1180
>gb|AF435646.1| Oryza sativa CSLH1 mRNA, partial cds Length = 2393 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1290 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 1349 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 1350 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 1409 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 || | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 1410 gaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 1469 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| ||| Sbjct: 1470 cagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatc 1529 Query: 775 ctc 777 ||| Sbjct: 1530 ctc 1532 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 1592 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 1651 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 1652 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 1711 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 1712 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 1771 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 1772 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 1831 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 1832 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1891 Query: 1137 caa 1139 ||| Sbjct: 1892 caa 1894 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 31 aggctggtgccatgaatgttctgacaagggtgtcagccgtgatgaccaacgctcccatca 90 ||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||| Sbjct: 793 aggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattca 852 Query: 91 tgctgaatgtggactgcgacatgtt 115 |||| || | |||||||||||||| Sbjct: 853 tgctaaacctagactgcgacatgtt 877 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1080 ggctgctttcaccgcagaaaagtcatttacggcatg 1115
>dbj|AK121003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B21, full insert sequence Length = 2658 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1355 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 1414 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 1415 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 1474 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 || | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 1475 gaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 1534 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| ||| Sbjct: 1535 cagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatc 1594 Query: 775 ctc 777 ||| Sbjct: 1595 ctc 1597 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 1657 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 1716 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 1717 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 1776 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 1777 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 1836 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 1837 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 1896 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 1897 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1956 Query: 1137 caa 1139 ||| Sbjct: 1957 caa 1959 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 31 aggctggtgccatgaatgttctgacaagggtgtcagccgtgatgaccaacgctcccatca 90 ||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||| Sbjct: 858 aggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattca 917 Query: 91 tgctgaatgtggactgcgacatgtt 115 |||| || | |||||||||||||| Sbjct: 918 tgctaaacctagactgcgacatgtt 942 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1145 ggctgctttcaccgcagaaaagtcatttacggcatg 1180
>dbj|AK069071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H01, full insert sequence Length = 2386 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 1314 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 1373 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 1374 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 1433 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 || | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 1434 gaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 1493 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| ||| Sbjct: 1494 cagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatc 1553 Query: 775 ctc 777 ||| Sbjct: 1554 ctc 1556 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 1616 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 1675 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 1676 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 1735 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 1736 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 1795 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 1796 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 1855 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 1856 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1915 Query: 1137 caa 1139 ||| Sbjct: 1916 caa 1918 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 31 aggctggtgccatgaatgttctgacaagggtgtcagccgtgatgaccaacgctcccatca 90 ||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||| Sbjct: 817 aggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattca 876 Query: 91 tgctgaatgtggactgcgacatgtt 115 |||| || | |||||||||||||| Sbjct: 877 tgctaaacctagactgcgacatgtt 901 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1104 ggctgctttcaccgcagaaaagtcatttacggcatg 1139
>dbj|AK060286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C08, full insert sequence Length = 1719 Score = 125 bits (63), Expect = 6e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 535 tgcaactatgaggctggcacgtgttggggcaaggagattggttgggtctatggatcaatg 594 |||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 414 tgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactg 473 Query: 595 acagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttg 654 ||||||||| | ||||||||||||||||||||||| |||||||||| ||| | || || Sbjct: 474 acagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatg 533 Query: 655 gacaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgacc 714 || | | | ||||| |||||| |||| ||||| || | || || || ||| || | ||| Sbjct: 534 gaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacc 593 Query: 715 cagttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatc 774 ||||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| ||| Sbjct: 594 cagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatc 653 Query: 775 ctc 777 ||| Sbjct: 654 ctc 656 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 716 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 775 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 776 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 835 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 836 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 895 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 896 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 955 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 956 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 1015 Query: 1137 caa 1139 ||| Sbjct: 1016 caa 1018 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 204 ggctgctttcaccgcagaaaagtcatttacggcatg 239
>tpg|BK000084.1| TPA_exp: Oryza sativa cellulose synthase-like H1 gene, complete cds Length = 5600 Score = 107 bits (54), Expect = 1e-19 Identities = 168/206 (81%) Strand = Plus / Plus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| | Sbjct: 4390 ttggttgggtctatggatcactgacagaagacgtgttgaccggacaacggatccatgcag 4449 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 ||||||||| ||| | || |||| | | | ||||| |||||| |||| ||||| || | Sbjct: 4450 cgggttggagatccacgctgatggaaatcgaaccaccagcattcatgggttgtgcaccaa 4509 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggttctggagatac 751 || || || ||| || | |||||||| |||||||||||| |||| || | || |||| Sbjct: 4510 atggagggcccgcctgcctaacccagttgaagagatgggcatcaggttttttagaaatac 4569 Query: 752 tcatcagccggaacagccctatcctc 777 ||||||| ||||| | ||| |||||| Sbjct: 4570 tcatcagtcggaataacccaatcctc 4595 Score = 95.6 bits (48), Expect = 5e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 1024 tggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctc 1083 ||||||||||||||||||||||| |||||||| || || || ||||| || || || || Sbjct: 5007 tggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggcatttctt 5066 Query: 1084 accgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccgcaa 1139 ||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 5067 accgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccgcaa 5122 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 3783 ggctgctttcaccgcagaaaagtcatttacggcatg 3818 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 53 gacaagggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacat 112 ||||||||||||||| ||||||||||||| || ||||||| || | ||||||||||| Sbjct: 3428 gacaagggtgtcagcactgatgaccaacgccccattcatgctaaacctagactgcgacat 3487 Query: 113 gtt 115 ||| Sbjct: 3488 gtt 3490 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 4655 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 4714 Query: 897 cacaaaccagtccttcttgccaa 919 ||||||| ||||||||||||| Sbjct: 4715 atcaaaccaatccttcttgccaa 4737
>gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0035F15, complete sequence Length = 138335 Score = 107 bits (54), Expect = 1e-19 Identities = 168/206 (81%) Strand = Plus / Plus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| | Sbjct: 66384 ttggttgggtctatggatcactgacagaagacgtgttgaccggacaacggatccatgcag 66443 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 ||||||||| ||| | || |||| | | | ||||| |||||| |||| ||||| || | Sbjct: 66444 cgggttggagatccacgctgatggaaatcgaaccaccagcattcatgggttgtgcaccaa 66503 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggttctggagatac 751 || || || ||| || | |||||||| |||||||||||| |||| || | || |||| Sbjct: 66504 atggagggcccgcctgcctaacccagttgaagagatgggcatcaggttttttagaaatac 66563 Query: 752 tcatcagccggaacagccctatcctc 777 ||||||| ||||| | ||| |||||| Sbjct: 66564 tcatcagtcggaataacccaatcctc 66589 Score = 95.6 bits (48), Expect = 5e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 1024 tggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctc 1083 ||||||||||||||||||||||| |||||||| || || || ||||| || || || || Sbjct: 67001 tggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggcatttctt 67060 Query: 1084 accgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccgcaa 1139 ||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 67061 accgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccgcaa 67116 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 65777 ggctgctttcaccgcagaaaagtcatttacggcatg 65812 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 53 gacaagggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacat 112 ||||||||||||||| ||||||||||||| || ||||||| || | ||||||||||| Sbjct: 65422 gacaagggtgtcagcactgatgaccaacgccccattcatgctaaacctagactgcgacat 65481 Query: 113 gtt 115 ||| Sbjct: 65482 gtt 65484 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 66649 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 66708 Query: 897 cacaaaccagtccttcttgccaa 919 ||||||| ||||||||||||| Sbjct: 66709 atcaaaccaatccttcttgccaa 66731
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 107 bits (54), Expect = 1e-19 Identities = 168/206 (81%) Strand = Plus / Plus Query: 572 ttggttgggtctatggatcaatgacagaagacattttgaccggacaacggatccatgcgg 631 |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| | Sbjct: 9578311 ttggttgggtctatggatcactgacagaagacgtgttgaccggacaacggatccatgcag 9578370 Query: 632 cgggttggaaatcggccttgttggacaccaacccaccggcattcttgggatgtgctccga 691 ||||||||| ||| | || |||| | | | ||||| |||||| |||| ||||| || | Sbjct: 9578371 cgggttggagatccacgctgatggaaatcgaaccaccagcattcatgggttgtgcaccaa 9578430 Query: 692 ccgggggaccggccagcttgacccagttcaagagatgggcaacaggggttctggagatac 751 || || || ||| || | |||||||| |||||||||||| |||| || | || |||| Sbjct: 9578431 atggagggcccgcctgcctaacccagttgaagagatgggcatcaggttttttagaaatac 9578490 Query: 752 tcatcagccggaacagccctatcctc 777 ||||||| ||||| | ||| |||||| Sbjct: 9578491 tcatcagtcggaataacccaatcctc 9578516 Score = 95.6 bits (48), Expect = 5e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 1024 tggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgccttcctc 1083 ||||||||||||||||||||||| |||||||| || || || ||||| || || || || Sbjct: 9578928 tggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggcatttctt 9578987 Query: 1084 accgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccgcaa 1139 ||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 9578988 accgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccgcaa 9579043 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 ggctgttttcaccgcaggaaagtcatttacggcatg 351 ||||| ||||||||||| |||||||||||||||||| Sbjct: 9577704 ggctgctttcaccgcagaaaagtcatttacggcatg 9577739 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 53 gacaagggtgtcagccgtgatgaccaacgctcccatcatgctgaatgtggactgcgacat 112 ||||||||||||||| ||||||||||||| || ||||||| || | ||||||||||| Sbjct: 9577349 gacaagggtgtcagcactgatgaccaacgccccattcatgctaaacctagactgcgacat 9577408 Query: 113 gtt 115 ||| Sbjct: 9577409 gtt 9577411 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 9578576 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 9578635 Query: 897 cacaaaccagtccttcttgccaa 919 ||||||| ||||||||||||| Sbjct: 9578636 atcaaaccaatccttcttgccaa 9578658
>dbj|AK061162.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A01, full insert sequence Length = 1187 Score = 101 bits (51), Expect = 8e-18 Identities = 240/303 (79%) Strand = Plus / Plus Query: 837 gtggcccgtgagggcgcctttcgagctgtgctatgcactattgggacctttctgccttct 896 |||||| |||||||| |||||||| ||||||||||| | ||||| |||| ||| | || Sbjct: 242 gtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttact 301 Query: 897 cacaaaccagtccttcttgccaacggcatcggatgaaggttttcgcatcccagtagctct 956 ||||||| ||||||||||||| | |||| || || ||||| |||| || ||||||| Sbjct: 302 atcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctct 361 Query: 957 attcttgagttaccacatataccacttgatggagtacaaggagtgcgggctctctgcccg 1016 |||| | || ||| |||| || ||||||| || ||||| |||| ||||| || Sbjct: 362 attcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacg 421 Query: 1017 cgcctggtggaacaaccacaggatgcaacgcatcacctcggcctccgcctggctcctcgc 1076 || || ||||||||||||||||||||||| |||||||| || || || ||||| || || Sbjct: 422 tgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggc 481 Query: 1077 cttcctcaccgtgatcctcaagacactagggctctctgagaccgtgttcgaggtcacccg 1136 || || ||||| ||||||||||| |||| |||| ||||| ||||||||||||||||| Sbjct: 482 atttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccg 541 Query: 1137 caa 1139 ||| Sbjct: 542 caa 544 Score = 67.9 bits (34), Expect = 1e-07 Identities = 145/182 (79%) Strand = Plus / Plus Query: 596 cagaagacattttgaccggacaacggatccatgcggcgggttggaaatcggccttgttgg 655 |||||||| | ||||||||||||||||||||||| |||||||||| ||| | || ||| Sbjct: 1 cagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatgg 60 Query: 656 acaccaacccaccggcattcttgggatgtgctccgaccgggggaccggccagcttgaccc 715 | | | | ||||| |||||| |||| ||||| || | || || || ||| || | |||| Sbjct: 61 aaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaaccc 120 Query: 716 agttcaagagatgggcaacaggggttctggagatactcatcagccggaacagccctatcc 775 |||| |||||||||||| |||| || | || ||||||||||| ||||| | ||| |||| Sbjct: 121 agttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatcc 180 Query: 776 tc 777 || Sbjct: 181 tc 182
>gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, complete sequence Length = 168136 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1596 tatctatctatctctccctaatctctctct 1625 |||||||||||||||||| ||||||||||| Sbjct: 27926 tatctatctatctctccccaatctctctct 27955
>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete cds Length = 11475 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1616 atctctctctaataataaagcaaattgagtttct 1649 ||||||| ||||||||||||||||||| |||||| Sbjct: 8583 atctctccctaataataaagcaaattgggtttct 8616
>emb|CT010483.12| Mouse DNA sequence from clone RP23-281L8 on chromosome 17, complete sequence Length = 189895 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1596 tatctatctatctctccctaatctctctct 1625 |||||||||||||||||| ||||||||||| Sbjct: 61730 tatctatctatctctccccaatctctctct 61701
>ref|NM_001065838.1| Oryza sativa (japonica cultivar-group) Os07g0252400 (Os07g0252400) mRNA, complete cds Length = 3745 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatggatcaatgacagaagacattttgac 611 ||||| ||||||||||| ||| ||||||| ||||| |||||||| || ||||| Sbjct: 2396 tgggggaaggagattggctggatctatggttcaattacagaagatatcttgac 2448
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 50.1 bits (25), Expect = 0.027 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1616 atctctctctaataataaagcaaat 1640 ||||||||||||||||||||||||| Sbjct: 86771 atctctctctaataataaagcaaat 86747
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 50.1 bits (25), Expect = 0.027 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1615 aatctctctctaataataaagcaaa 1639 ||||||||||||||||||||||||| Sbjct: 22120 aatctctctctaataataaagcaaa 22096
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1612 cctaatctctctctaataataaagcaaat 1640 ||||||||||| ||||||||||||||||| Sbjct: 318264 cctaatctctccctaataataaagcaaat 318236
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatggatcaatgacagaagacattttgac 611 ||||| ||||||||||| ||| ||||||| ||||| |||||||| || ||||| Sbjct: 2397 tgggggaaggagattggctggatctatggttcaattacagaagatatcttgac 2449
>gb|DQ020215.1| Bambusa oldhamii cellulose synthase BoCesA7 mRNA, partial cds Length = 2997 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatggatcaatgacagaaga 602 ||||| ||||||||||| ||| | ||||||||||| |||||||| Sbjct: 1433 tgggggaaggagattggctggatttatggatcaattacagaaga 1476
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1615 aatctctctctaataataaagcaaatt 1641 |||||||| |||||||||||||||||| Sbjct: 35518 aatctctccctaataataaagcaaatt 35544
>ref|NM_001067298.1| Oryza sativa (japonica cultivar-group) Os08g0101700 (Os08g0101700) mRNA, complete cds Length = 1158 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 495 ctggctcctcgccttcctcacc 516
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 886 ttctgccttctcacaaaccagt 907 |||||||||||||||||||||| Sbjct: 3622284 ttctgccttctcacaaaccagt 3622263
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1159 ggcggcgccggcaccgacgagg 1180 |||||||||||||||||||||| Sbjct: 97772 ggcggcgccggcaccgacgagg 97793
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1624 ctaataataaagcaaattgagtttct 1649 ||||||||||||||||||| |||||| Sbjct: 8695 ctaataataaagcaaattgggtttct 8720
>emb|CR691646.2|CNS0FWMI Tetraodon nigroviridis full-length cDNA Length = 1458 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1162 ggcgccggcaccgacgaggccg 1183 |||||||||||||||||||||| Sbjct: 141 ggcgccggcaccgacgaggccg 162
>emb|CR684390.2|CNS0FR0Y Tetraodon nigroviridis full-length cDNA Length = 1639 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1162 ggcgccggcaccgacgaggccg 1183 |||||||||||||||||||||| Sbjct: 315 ggcgccggcaccgacgaggccg 336
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 90092 ctggctcctcgccttcctcacc 90071
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1161 cggcgccggcaccgacgaggcc 1182 |||||||||||||||||||||| Sbjct: 64022 cggcgccggcaccgacgaggcc 64001
>gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mRNA, complete cds Length = 4428 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 558 ttggggcaaggagattggttgggtctatggatcaatgacagaagacattttgac 611 |||||| || |||||||||||| | ||||| || |||||||||| |||||||| Sbjct: 2991 ttggggaaaagagattggttggatatatggttctgtgacagaagatattttgac 3044
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 5427 ctggctcctcgccttcctcacc 5406
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 90092 ctggctcctcgccttcctcacc 90071
>dbj|AK104211.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D02, full insert sequence Length = 1107 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 499 ctggctcctcgccttcctcacc 520
>dbj|AK070102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047K10, full insert sequence Length = 968 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 489 ctggctcctcgccttcctcacc 510
>dbj|AK061172.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B08, full insert sequence Length = 1160 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1065 ctggctcctcgccttcctcacc 1086 |||||||||||||||||||||| Sbjct: 495 ctggctcctcgccttcctcacc 516
>emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chromosome X, complete sequence Length = 197148 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1596 tatctatctatctctccctaatctct 1621 ||||||||||||||| |||||||||| Sbjct: 161020 tatctatctatctctacctaatctct 161045
>gb|AC154739.2| Mus musculus BAC clone RP23-117B4 from 9, complete sequence Length = 196406 Score = 44.1 bits (22), Expect = 1.6 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 1596 tatctatctatctctccctaatctctctct 1625 ||||||||||||||||||| |||||||||| Sbjct: 146148 tatctatctatctctccct-atctctctct 146176
>emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chromosome 2, complete sequence Length = 215505 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 722 agagatgggcaacaggggttctggag 747 ||||||||||||| |||||||||||| Sbjct: 177121 agagatgggcaactggggttctggag 177146
>dbj|AK242870.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090076L04, full insert sequence Length = 3158 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 66 ccaatgtatctatctatctct 86
>ref|NM_001072463.1| Oryza sativa (japonica cultivar-group) Os12g0105300 (Os12g0105300) mRNA, complete cds Length = 3183 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 71 ccaatgtatctatctatctct 91
>ref|NM_001070003.1| Oryza sativa (japonica cultivar-group) Os09g0478000 (Os09g0478000) mRNA, complete cds Length = 606 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgaatgtggactgcgacatgt 114 ||||||||||||||||||||| Sbjct: 329 tgaatgtggactgcgacatgt 349
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1483 gccgggctggccatcgaaata 1503 ||||||||||||||||||||| Sbjct: 2190139 gccgggctggccatcgaaata 2190159
>dbj|AK226243.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit, complete cds, clone: RAFL04-19-E02 Length = 3722 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 |||||||| |||||||||||| ||||||| Sbjct: 2431 tggggcaaagagattggttggatctatgg 2459
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups (CESA1) mRNA, complete cds Length = 3912 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 |||||||| |||||||||||| ||||||| Sbjct: 2573 tggggcaaagagattggttggatctatgg 2601
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 cggcacgggctgttttcaccg 329 ||||||||||||||||||||| Sbjct: 725184 cggcacgggctgttttcaccg 725204
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 ||||||||||||||||| ||| ||||||| Sbjct: 2315 tggggcaaggagattgggtggatctatgg 2343
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence Length = 168350 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1576 aaaggaagtttgacccaatgtatct 1600 ||||||||||||||||| ||||||| Sbjct: 44871 aaaggaagtttgacccagtgtatct 44847
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 |||||||| |||||||||||| ||||||| Sbjct: 2440 tggggcaaagagattggttggatctatgg 2468
>ref|XM_461620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G02244g) partial mRNA Length = 3594 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1523 tctaccattggaacatgtaac 1543 ||||||||||||||||||||| Sbjct: 188 tctaccattggaacatgtaac 168
>emb|CR382386.8| Zebrafish DNA sequence from clone DKEY-111O10 in linkage group 14, complete sequence Length = 162528 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 tcaatgacagaagacattttg 609 ||||||||||||||||||||| Sbjct: 32021 tcaatgacagaagacattttg 32001
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit, complete cds, clone: RAFL22-92-A12 Length = 1456 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 |||||||| |||||||||||| ||||||| Sbjct: 169 tggggcaaagagattggttggatctatgg 197
>gb|AE011857.1| Xanthomonas axonopodis pv. citri str. 306, section 235 of 469 of the complete genome Length = 12995 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 gatggcggcgccggcaccgac 1176 ||||||||||||||||||||| Sbjct: 2515 gatggcggcgccggcaccgac 2495
>emb|X52103.1|TAEMG T.aestivum Em gene Length = 2465 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1625 taataataaagcaaattgagtttct 1649 |||||||||||||||||| |||||| Sbjct: 774 taataataaagcaaattgggtttct 750
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 281000 ccaatgtatctatctatctct 280980
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 260953 ccaatgtatctatctatctct 260933
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgaatgtggactgcgacatgt 114 ||||||||||||||||||||| Sbjct: 18248269 tgaatgtggactgcgacatgt 18248249
>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1 Contains a keratin 18 (KRT18) pseudogene, the 3' end of the RAP1A gene for RAP1A member of RAS oncogene family, three novel genes, the DDX20 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, the 3' end of the KCND3 gene for potassium voltage-gated channel Shal-related subfamily member 3 and two CpG islands, complete sequence Length = 128379 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1154 ccgatggcggcgccggcaccg 1174 ||||||||||||||||||||| Sbjct: 92088 ccgatggcggcgccggcaccg 92068
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 688 ccgaccgggggaccggccagc 708 ||||||||||||||||||||| Sbjct: 4404596 ccgaccgggggaccggccagc 4404616
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1523 tctaccattggaacatgtaac 1543 ||||||||||||||||||||| Sbjct: 159615 tctaccattggaacatgtaac 159635
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgaatgtggactgcgacatgt 114 ||||||||||||||||||||| Sbjct: 96993 tgaatgtggactgcgacatgt 96973
>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full insert sequence Length = 3183 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 72 ccaatgtatctatctatctct 92
>gb|AY107656.1| Zea mays PCO126464 mRNA sequence Length = 1189 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 559 tggggcaaggagattggttgggtctatgg 587 ||||||||||||||||| ||| ||||||| Sbjct: 14 tggggcaaggagattgggtggatctatgg 42
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 44040 ccaatgtatctatctatctct 44060
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1590 ccaatgtatctatctatctct 1610 ||||||||||||||||||||| Sbjct: 14051 ccaatgtatctatctatctct 14031
>gb|AF007560.1|AF007560 Mus musculus presenilin-1 gene, alternatively spliced transcripts, complete cds Length = 48974 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1576 aaaggaagtttgacccaatgtatct 1600 ||||||||||||||||| ||||||| Sbjct: 1395 aaaggaagtttgacccagtgtatct 1419 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 251,143,581 Number of extensions: 13524681 Number of successful extensions: 246130 Number of sequences better than 10.0: 69 Number of HSP's gapped: 246108 Number of HSP's successfully gapped: 136 Length of query: 1703 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1680 Effective length of database: 18,503,978,556 Effective search space: 31086683974080 Effective search space used: 31086683974080 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)