ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5n19 |
|---|---|
| Clone Library Name | barley_pub |
>P14897:ELI9_HORVU Low molecular mass early light-inducible protein HV90, chloroplast| precursor - Hordeum vulgare (Barley) Length = 172 Score = 194 bits (493), Expect = 3e-49 Identities = 106/158 (67%), Positives = 109/158 (68%) Frame = +2 Query: 164 VLPRGSAGHFGVQSLPALGRRALVARAQTEGXXXXXXXXXXASTSIWDALAFSGPAPERI 343 V+PR SA FG +SLPALGRRALV RAQTEG ASTSIWD +AFSGPAPERI Sbjct: 15 VVPRSSASSFGARSLPALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERI 74 Query: 344 NGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXXAWFXXXXXXXXXXXXXXXXQGESAEGR 523 NGRLAMVGFVTALAVEA AWF QGESAEGR Sbjct: 75 NGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGR 134 Query: 524 AGTIMNANAELWNGRFAMLGLVALAATEIITGAPFINV 637 AG IMNANAELWNGRFAMLGLVALAATEIITGAPFINV Sbjct: 135 AGAIMNANAELWNGRFAMLGLVALAATEIITGAPFINV 172
>P14896:ELI6_HORVU Low molecular mass early light-inducible protein HV60, chloroplast| precursor - Hordeum vulgare (Barley) Length = 167 Score = 185 bits (470), Expect = 2e-46 Identities = 104/158 (65%), Positives = 107/158 (67%) Frame = +2 Query: 164 VLPRGSAGHFGVQSLPALGRRALVARAQTEGXXXXXXXXXXASTSIWDALAFSGPAPERI 343 VLPRGSA +SLPALGRR LV RAQTEG ASTSIWDA+AFSGPAPERI Sbjct: 15 VLPRGSA-----RSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERI 69 Query: 344 NGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXXAWFXXXXXXXXXXXXXXXXQGESAEGR 523 NGRLAMVGFVTALAVEA AWF QGESAEGR Sbjct: 70 NGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGR 129 Query: 524 AGTIMNANAELWNGRFAMLGLVALAATEIITGAPFINV 637 AG IMNANAELWNGRFAM+GLVALAATEIITG PFINV Sbjct: 130 AGAIMNANAELWNGRFAMIGLVALAATEIITGTPFINV 167
>P14895:ELI5_HORVU High molecular mass early light-inducible protein HV58, chloroplast| precursor - Hordeum vulgare (Barley) Length = 231 Score = 125 bits (313), Expect = 3e-28 Identities = 67/118 (56%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Frame = +2 Query: 287 ASTSIWDALAFSGPAPERINGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXX-AWFXXXX 463 A+ S+WDALAFSGPAPERINGRLAMVGFV AL+VEA AWF Sbjct: 114 ANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATA 173 Query: 464 XXXXXXXXXXXXQGESAEGRAGTIMNANAELWNGRFAMLGLVALAATEIITGAPFINV 637 QG+S E ++ I +A+AELWNGRFAMLGLVALAATE ITGAPF+N+ Sbjct: 174 GVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFVNI 231
>P11432:ELI_PEA Early light-induced protein, chloroplast precursor - Pisum sativum| (Garden pea) Length = 196 Score = 94.0 bits (232), Expect = 6e-19 Identities = 52/114 (45%), Positives = 63/114 (55%) Frame = +2 Query: 290 STSIWDALAFSGPAPERINGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXXAWFXXXXXX 469 ST D +AFSGPAPERINGRLAM+GFV A+ VE AWF Sbjct: 84 STKFSDLMAFSGPAPERINGRLAMIGFVAAMGVE-IAKGQGLSEQLSGGGVAWFLGTSVL 142 Query: 470 XXXXXXXXXXQGESAEGRAGTIMNANAELWNGRFAMLGLVALAATEIITGAPFI 631 QG S E ++ +IM+++AE WNGR AMLGLVALA TE + G + Sbjct: 143 LSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
>Q01931:DS22_CRAPL Desiccation stress protein DSP-22, chloroplast precursor -| Craterostigma plantagineum Length = 199 Score = 83.2 bits (204), Expect = 1e-15 Identities = 47/111 (42%), Positives = 57/111 (51%) Frame = +2 Query: 305 DALAFSGPAPERINGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXXAWFXXXXXXXXXXX 484 D +F G APERINGR AM+GFV A+ VE WF Sbjct: 90 DLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVM-WFLLTSAVLVLAT 148 Query: 485 XXXXXQGESAEGRAGTIMNANAELWNGRFAMLGLVALAATEIITGAPFINV 637 +G S E + N++AE+WNGRFAM+GLVALA TE + G P INV Sbjct: 149 LIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLINV 199
>P27516:CBR_DUNBA Carotene biosynthesis-related protein CBR, chloroplast precursor -| Dunaliella bardawil Length = 172 Score = 44.7 bits (104), Expect = 4e-04 Identities = 35/111 (31%), Positives = 46/111 (41%) Frame = +2 Query: 287 ASTSIWDALAFSGPAPERINGRLAMVGFVTALAVEAXXXXXXXXXXXXXXXXAWFXXXXX 466 A+ ++ + + FSG APE INGRLAM+GFV AL E Sbjct: 63 AAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIALTFVLF 121 Query: 467 XXXXXXXXXXXQGESAEGRAGTIMNANAELWNGRFAMLGLVALAATEIITG 619 + A G +AE+ NGRFAM+G A+ E I G Sbjct: 122 SAASLIPAFARRKGDAMGP----FTPDAEMTNGRFAMIGFAAMLVYEGIQG 168
>Q1XDD2:YCF17_PORYE Uncharacterized protein ycf17 - Porphyra yezoensis| Length = 48 Score = 36.6 bits (83), Expect = 0.12 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITG 619 +AE WNGRFAM+G +++ E++TG Sbjct: 13 SAETWNGRFAMIGFISVIFIEVVTG 37
>P51355:YCF17_PORPU Uncharacterized protein ycf17 - Porphyra purpurea| Length = 48 Score = 36.6 bits (83), Expect = 0.12 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITG 619 +AE WNGRFAM+G +A+ E++TG Sbjct: 13 SAETWNGRFAMIGFMAVIFIELVTG 37
>Q8YQR8:HEMH_ANASP Ferrochelatase - Anabaena sp. (strain PCC 7120)| Length = 388 Score = 36.6 bits (83), Expect = 0.12 Identities = 16/34 (47%), Positives = 25/34 (73%) Frame = +2 Query: 536 MNANAELWNGRFAMLGLVALAATEIITGAPFINV 637 M ++AE+WNGR AMLG +AL E++TG +++ Sbjct: 351 MTSSAEVWNGRIAMLGFIAL-IIELVTGQGLLHM 383
>Q0DIV0:HEMH_ORYSJ Ferrochelatase-2, chloroplast precursor - Oryza sativa subsp.| japonica (Rice) Length = 526 Score = 35.4 bits (80), Expect = 0.26 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITGAPFIN 634 +AE WNGR AML ++AL E+ TG F++ Sbjct: 488 SAETWNGRAAMLAVLALLVLEVTTGEGFLH 517
>A2Y3Q5:HEMH_ORYSI Ferrochelatase-2, chloroplast precursor - Oryza sativa subsp.| indica (Rice) Length = 526 Score = 35.4 bits (80), Expect = 0.26 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITGAPFIN 634 +AE WNGR AML ++AL E+ TG F++ Sbjct: 488 SAETWNGRAAMLAVLALLVLEVTTGEGFLH 517
>O04921:HEMH2_ARATH Ferrochelatase-2, chloroplast precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 512 Score = 35.4 bits (80), Expect = 0.26 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITGAPFIN 634 +AE WNGR AML ++AL E+ TG F++ Sbjct: 475 SAETWNGRAAMLAVLALLVLEVTTGKGFLH 504
>P48367:YCF17_CYAPA Uncharacterized protein ycf17 - Cyanophora paradoxa| Length = 49 Score = 35.0 bits (79), Expect = 0.34 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 542 ANAELWNGRFAMLGLVALAATEIITG 619 + AE WNGR AMLG +A TE +TG Sbjct: 14 SGAENWNGRLAMLGFIAALLTESLTG 39
>Q5N2B2:HEMH_SYNP6 Ferrochelatase - Synechococcus sp. (strain ATCC 27144 / PCC 6301 /| SAUG 1402/1) (Anacystis nidulans) Length = 387 Score = 35.0 bits (79), Expect = 0.34 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 545 NAELWNGRFAMLGLVALAATEIITG 619 NAE+WNGR AMLG +AL E++TG Sbjct: 354 NAEVWNGRIAMLGFLAL-LVELLTG 377
>P54225:HEMH_SYNY3 Ferrochelatase - Synechocystis sp. (strain PCC 6803)| Length = 387 Score = 32.7 bits (73), Expect = 1.7 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +2 Query: 548 AELWNGRFAMLGLVALAATEIITG 619 AE+WNGR AMLG +AL E+I+G Sbjct: 355 AEVWNGRLAMLGFIAL-LVELISG 377
>Q8DGU6:HEMH_SYNEL Ferrochelatase - Synechococcus elongatus (Thermosynechococcus| elongatus) Length = 388 Score = 32.0 bits (71), Expect = 2.9 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +2 Query: 536 MNANAELWNGRFAMLGLVALAATEIITG 619 M + AE WNGR AMLG +AL E+I+G Sbjct: 352 MTSAAERWNGRLAMLGFLAL-MIELISG 378
>Q7V6C6:HEMH_PROMM Ferrochelatase - Prochlorococcus marinus (strain MIT 9313)| Length = 391 Score = 31.2 bits (69), Expect = 4.9 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +2 Query: 536 MNANAELWNGRFAMLGLVALAATEIITG 619 +N ++E WNGR AMLG A E+I+G Sbjct: 355 LNTSSEAWNGRIAMLGFAAF-LLELISG 381
>P27521:CB24_ARATH Chlorophyll a-b binding protein 4, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 251 Score = 31.2 bits (69), Expect = 4.9 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 548 AELWNGRFAMLGLVALAATEIITGAPFINV 637 AEL NGR+AMLG+ + E+ T INV Sbjct: 95 AELVNGRWAMLGVAGMLLPEVFTKIGIINV 124 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 109,030,138 Number of extensions: 1965897 Number of successful extensions: 5642 Number of sequences better than 10.0: 18 Number of HSP's gapped: 5628 Number of HSP's successfully gapped: 18 Length of query: 266 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 155 Effective length of database: 70,239,694 Effective search space: 10887152570 Effective search space used: 10887152570 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
