ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5n19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV90) Length = 660 Score = 710 bits (358), Expect = 0.0 Identities = 484/526 (92%) Strand = Plus / Plus Query: 114 gctgattaatggcaaccatgatgaccatgagctccttcgccggtgccgccgtcctgccgc 173 |||||| |||||| ||||||||| |||||||||||||||||||||| |||||| |||||| Sbjct: 23 gctgatcaatggcgaccatgatgtccatgagctccttcgccggtgcggccgtcgtgccgc 82 Query: 174 gtggctcggccggccacttcggtgtccagtctcttccagcgctgggccgacgcgccctcg 233 | |||||||| || |||||| | || |||||| ||||||||||||||||||||||||| Sbjct: 83 gcagctcggccagcagcttcggcgcccggtctctgccagcgctgggccgacgcgccctcg 142 Query: 234 tcgcgagggcacaaaccgaaggcccaaattcaccaccgccaagcaaacccaaggcgagca 293 ||| |||||||| ||||| ||||| | |||||||||||| ||||||||||||||||| Sbjct: 143 tcgtcagggcacagaccgagggcccgagcgcaccaccgccaaacaaacccaaggcgagca 202 Query: 294 cctcgatctgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggc 353 ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 203 cctcgatctgggacgagatggcgttcagcggccctgcgccggagcgcatcaacgggcggc 262 Query: 354 tcgccatggtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcc 413 | |||||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||| Sbjct: 263 tagccatggtgggcttcgtgacggcgcttgcggtggaggcagggcgcggcgacgggctcc 322 Query: 414 tctcgcagctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgt 473 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 323 tctcgcagctcggcagcggcaccgggcaggcgtggttcgcctacaccgtggcggtgctgt 382 Query: 474 ccgtggcgtcgctggtgccactgctccagggcgagagcgccgagggcagagccggcacca 533 || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 383 ccatggcgtcgctggtgccgctgctccagggcgagagcgccgagggcagagccggcgcca 442 Query: 534 tcatgaacgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgc 593 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 443 tcatgaacgccaacgcggaactctggaacggccgcttcgccatgctcggactcgtcgcgc 502 Query: 594 tcgccgccaccgagatcatcaccggcgcgcccttcatcaacgtgta 639 | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 503 tggccgccaccgagatcatcaccggcgcgcctttcatcaacgtgta 548
>emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular mass early light-inducible protein (ELIP) (clone HV60) Length = 764 Score = 624 bits (315), Expect = e-175 Identities = 483/538 (89%), Gaps = 12/538 (2%) Strand = Plus / Plus Query: 202 gtctcttccagcgctgggccgacgcgccctcgtcgcgagggcacaaaccgaaggcccaaa 261 |||||| ||||||||||||||||| ||||||||| |||||||| ||||| ||||| || Sbjct: 192 gtctctgccagcgctgggccgacgtaccctcgtcgtcagggcacagaccgagggcccgaa 251 Query: 262 ttcaccaccgccaagcaaacccaaggcgagcacctcgatctgggacgcgctggcgttcag 321 |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 252 cgcaccaccgccaaacaaacccaaggcgagcacctccatctgggacgcgatggcgttcag 311 Query: 322 cggcccagcgccggagcgcatcaacgggcggctcgccatggtaggcttcgtgactgcgct 381 |||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 312 cggccctgcgccggagcgcatcaacgggcggctagccatggtgggcttcgtgacggcgct 371 Query: 382 cgccgtggaggcaggacgtggcgacgggctcctctcgcagctcggcagcggcaccgggca 441 || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ggctgtggaggcaggccgcggcgacgggctcctctcgcagctcggcagcggcaccgggca 431 Query: 442 ggcgtggttcgcctactccgtggccgtgctgtccgtggcgtcgctggtgccactgctcca 501 |||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 432 ggcgtggttcgcctacaccgtggcgatgctgtccatggcgtcgctggtgccgctgctcca 491 Query: 502 gggcgagagcgccgagggcagagccggcaccatcatgaacgccaacgcggagctctggaa 561 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 492 gggcgagagcgccgagggcagagccggcgccatcatgaacgccaacgcggagctctggaa 551 Query: 562 cggccgcttcgccatgctcggtctcgtcgcgctcgccgccaccgagatcatcaccggcgc 621 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 552 cggccgcttcgccatgatcggactcgtcgcgctcgccgccaccgagatcatcaccggcac 611 Query: 622 gcccttcatcaacgtgta----aaactagctctgtcgtcggccggataacacagcctctg 677 ||||||||||||||||| ||| ||||| || |||| |||||||||||| ||| | Sbjct: 612 ccccttcatcaacgtgtagaagaaaatagctttgctgtcgaccggataacacaacctgta 671 Query: 678 cctag-------gacatgtaaatgat-gagaattgatcatcctcatattctttgtagt 727 | ||| |||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct: 672 cttagctagtaggacatgtaaatgatccagaattgatcattctcgtattctttgtagt 729 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 116 tgattaatggcaaccatgatgaccatgagctccttcgccggtgccgccgtcctgccgcgt 175 ||||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 121 tgattaatggcgaccatgatggccatgagctccttcgccggtgcggccgtcttgccgcgc 180 Query: 176 ggctcggcc 184 ||||||||| Sbjct: 181 ggctcggcc 189
>dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 mRNA for early light-inducible protein (ELIP), complete cds Length = 818 Score = 587 bits (296), Expect = e-164 Identities = 478/539 (88%), Gaps = 6/539 (1%) Strand = Plus / Plus Query: 113 agctgattaatggcaaccatgatgaccatgagctcctt------cgccggtgccgccgtc 166 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||||| Sbjct: 106 agctgattaatggcgatcatgatggccatgagctcctttgccggcgccggcgccgccgtc 165 Query: 167 ctgccgcgtggctcggccggccacttcggtgtccagtctcttccagcgctgggccgacgc 226 |||||||| ||||||| ||| |||||| | ||||||||| |||||||||||| ||||| Sbjct: 166 ctgccgcgctgctcggctagccgcttcggcgcccagtctctgccagcgctgggcagacgc 225 Query: 227 gccctcgtcgcgagggcacaaaccgaaggcccaaattcaccaccgccaagcaaacccaag 286 |||||||||| |||||||| |||| ||||| | |||||||||||| |||||||||| Sbjct: 226 gccctcgtcgtcagggcacagaccgggggcccgagcgcaccaccgccaaacaaacccaag 285 Query: 287 gcgagcacctcgatctgggacgcgctggcgttcagcggcccagcgccggagcgcatcaac 346 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 286 gcgagcacctctatctgggacgcgctggcgttcagcggccctgcgccggagcgcattaat 345 Query: 347 gggcggctcgccatggtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgac 406 ||||| || |||||||| || |||||||| |||||||||||||||||||| || |||||| Sbjct: 346 gggcgcctggccatggtgggtttcgtgacggcgctcgccgtggaggcagggcgcggcgac 405 Query: 407 gggctcctctcgcagctcggcagcggcaccgggcaggcgtggttcgcctactccgtggcc 466 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gggctcctttcgcagctcggcagcggcaccgggcaggcgtggttcgcctactccgtggcg 465 Query: 467 gtgctgtccgtggcgtcgctggtgccactgctccagggcgagagcgccgagggcagagcc 526 ||| ||||| | || |||||||| |||||||| || ||||||||||||||||||||| Sbjct: 466 tggctatccgtatcttctctggtgccgctgctccaaggagagagcgccgagggcagagcc 525 Query: 527 ggcaccatcatgaacgccaacgcggagctctggaacggccgcttcgccatgctcggtctc 586 || | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 526 ggtatcatcatgaacgccaacgcggagctctggaacggccgcttcgccatgctcggactc 585 Query: 587 gtcgcgctcgccgccaccgagatcatcaccggcgcgcccttcatcaacgtgtaaaacta 645 ||||| || || || || ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 586 gtcgctctggcggcaacggagatcatcactggcgcgcccttcatcaacgtgtaaaacta 644 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 680 taggacatgtaaatgatgagaattgatcatcctcatattctttgtagt 727 |||||||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 689 taggacatgtaaatgatgagaactgatcatcctcgtattctttatagt 736
>gb|AF365951.1|AF365951 Zea mays early light-inducible protein ELIP mRNA, complete cds; nuclear gene for chloroplast product Length = 852 Score = 256 bits (129), Expect = 1e-64 Identities = 290/343 (84%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 300 tctgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgcca 359 ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| || | Sbjct: 316 tctgggacgcgctggcgttcagcgggcccgcgccggagcggatcaacgggcggctggcga 375 Query: 360 tggtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgc 419 |||| ||||||||| | ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 376 tggtgggcttcgtgtccgcgctcgccgtcgaggccacccgcggcgacggcatcctctcgc 435 Query: 420 agctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtgg 479 |||| |||| |||| | ||||||||||| ||| ||| ||||| ||||||| | Sbjct: 436 ca---ggcaacggcgccggcctcgcgtggttcgcgtacaccgccgccgtcctgtccgccg 492 Query: 480 cgtcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatga 539 |||| |||||||| ||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 493 cgtccctggtgccgctgctccagggggagagcgccgagggcaggagcggccggttcatga 552 Query: 540 acgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccg 599 |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 553 ccgccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgcgctcgccg 612 Query: 600 ccaccgagatcatcaccggcgcgcccttcatcaacgtgtaaaa 642 ||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 613 tcaccgagtaccttaccggcgcgcccttcgtcaacgtgtaaaa 655
>gb|DQ245405.1| Zea mays clone 15193 mRNA sequence Length = 1111 Score = 234 bits (118), Expect = 4e-58 Identities = 280/334 (83%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 |||||||||||||||||||||||||| || || |||||||||||||| || ||||||||| Sbjct: 574 tgggacgcgctggcgttcagcggcccggctcccgagcgcatcaacggccgcctcgccatg 633 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || ||||||||| | ||||||||||| ||||| || |||| || |||||||||||| Sbjct: 634 gtgggcttcgtgtcggcgctcgccgtcgaggcgtcccgcggcgggggcctcctctcgcag 693 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| |||||| || |||||||| | | | ||||||||||||||||| Sbjct: 694 gccggcagcgggtccgggctcgcctggttcgcggccacggctgccgtgctgtccgtggcc 753 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| |||||| |||||| |||||||||| ||| |||| || |||||| | Sbjct: 754 tcgctggtgccgctgctcaggggcgacagcgccgaggccaggagcggcgccgtcatgagc 813 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 814 gccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgcgctcgccttc 873 Query: 602 accgagatcatcaccggcgcgcccttcatcaacg 635 || ||| | |||||||||| || |||||||||| Sbjct: 874 actgagtacctcaccggcgcaccgttcatcaacg 907
>ref|NM_001065565.1| Oryza sativa (japonica cultivar-group) Os07g0178800 (Os07g0178800) mRNA, complete cds Length = 783 Score = 204 bits (103), Expect = 4e-49 Identities = 277/335 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 313 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 372 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 373 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 432 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| ||||||| |||| |||| Sbjct: 433 gccggcagcggggacgggctcgcgtggttcgccgccaccgccaccgtgctctccgcggcg 492 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 493 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 552 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||| | Sbjct: 553 gccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgccctcgccttc 612 Query: 602 accgagatcatcaccggcgcgcccttcatcaacgt 636 |||||| || |||||||| |||||||| ||||||| Sbjct: 613 accgagttcctcaccggctcgcccttcgtcaacgt 647
>ref|NM_001065564.1| Oryza sativa (japonica cultivar-group) Os07g0178700 (Os07g0178700) mRNA, complete cds Length = 603 Score = 204 bits (103), Expect = 4e-49 Identities = 268/323 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 265 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 324 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 325 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 384 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| |||||||| |||| |||| Sbjct: 385 gccggcagcgggggcgggctcgcgtggttcgccgccaccgccgccgtgctctccgcggcg 444 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 445 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 504 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 505 gccgacgctgagctctggaacggccgcttcgccatgctcggcctcgtcgcgctcgccttc 564 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 565 accgagttcctcaccggctcgcc 587
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 204 bits (103), Expect = 4e-49 Identities = 268/323 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 4176055 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4176114 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 4176115 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 4176174 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| |||||||| |||| |||| Sbjct: 4176175 gccggcagcgggggcgggctcgcgtggttcgccgccaccgccgccgtgctctccgcggcg 4176234 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 4176235 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 4176294 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 4176295 gccgacgctgagctctggaacggccgcttcgccatgctcggcctcgtcgcgctcgccttc 4176354 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 4176355 accgagttcctcaccggctcgcc 4176377 Score = 204 bits (103), Expect = 4e-49 Identities = 277/335 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 4178496 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4178555 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 4178556 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 4178615 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| ||||||| |||| |||| Sbjct: 4178616 gccggcagcggggacgggctcgcgtggttcgccgccaccgccaccgtgctctccgcggcg 4178675 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 4178676 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 4178735 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||| | Sbjct: 4178736 gccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgccctcgccttc 4178795 Query: 602 accgagatcatcaccggcgcgcccttcatcaacgt 636 |||||| || |||||||| |||||||| ||||||| Sbjct: 4178796 accgagttcctcaccggctcgcccttcgtcaacgt 4178830
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 204 bits (103), Expect = 4e-49 Identities = 268/323 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 59677 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 59736 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 59737 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcctggagcag 59796 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| |||||||| |||| |||| Sbjct: 59797 gccggcagcgggggcgggctcgcgtggttcgccgccaccgccgccgtgctctccgcggcg 59856 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 59857 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 59916 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 59917 gccgacgctgagctctggaacggccgcttcgccatgctcggcctcgtcgcgctcgccttc 59976 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 59977 accgagttcctcaccggctcgcc 59999 Score = 204 bits (103), Expect = 4e-49 Identities = 277/335 (82%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 62118 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 62177 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||||||||||||||| || |||| ||||||||| |||| Sbjct: 62178 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcag 62237 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||||| ||||| |||||||||||| | ||| ||||||| |||| |||| Sbjct: 62238 gccggcagcggggacgggctcgcgtggttcgccgccaccgccaccgtgctctccgcggcg 62297 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||||||| |||| || |||| | | |||| | Sbjct: 62298 tcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagc 62357 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||| | Sbjct: 62358 gccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgccctcgccttc 62417 Query: 602 accgagatcatcaccggcgcgcccttcatcaacgt 636 |||||| || |||||||| |||||||| ||||||| Sbjct: 62418 accgagttcctcaccggctcgcccttcgtcaacgt 62452
>emb|CT829904.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA039E04, full insert sequence Length = 1018 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 510 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 569 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 570 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 629 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 630 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 689 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 690 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 749 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 750 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 809 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 810 accgagttcctcaccggctcgcc 832
>emb|CT829094.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA038L24, full insert sequence Length = 925 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 417 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 476 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 477 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 536 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 537 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 596 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 597 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 656 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 657 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 716 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 717 accgagttcctcaccggctcgcc 739
>ref|NM_001049109.1| Oryza sativa (japonica cultivar-group) Os01g0246400 (Os01g0246400) mRNA, complete cds Length = 942 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 420 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 479 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 480 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 539 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 540 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 599 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 600 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 659 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 660 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 719 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 720 accgagttcctcaccggctcgcc 742
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 25483 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 25542 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 25543 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 25602 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 25603 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 25662 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 25663 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 25722 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 25723 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 25782 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 25783 accgagttcctcaccggctcgcc 25805
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 8061370 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 8061429 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 8061430 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 8061489 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 8061490 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 8061549 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 8061550 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 8061609 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 8061610 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 8061669 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 8061670 accgagttcctcaccggctcgcc 8061692
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 58021 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 58080 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 58081 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 58140 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 58141 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 58200 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 58201 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 58260 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 58261 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 58320 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 58321 accgagttcctcaccggctcgcc 58343
>dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E06, full insert sequence Length = 942 Score = 172 bits (87), Expect = 1e-39 Identities = 264/323 (81%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 420 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 479 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcctctcgcag 421 || || |||||| | ||||| ||||||||||| || |||| ||||||||| ||| Sbjct: 480 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcctggaccag 539 Query: 422 ctcggcagcggcaccgggcaggcgtggttcgcctactccgtggccgtgctgtccgtggcg 481 ||||||| | | ||||| ||||||||||||| | ||| |||||||| |||| |||| Sbjct: 540 gccggcagctggagcgggctggcgtggttcgccgccaccgccgccgtgctctccgcggcg 599 Query: 482 tcgctggtgccactgctccagggcgagagcgccgagggcagagccggcaccatcatgaac 541 ||||||||||| ||||||| ||||||| ||| |||| || |||| | | |||| | Sbjct: 600 tcgctggtgccgctgctccgcggcgagaccgcggaggcgaggagcggcggcgtgatgagc 659 Query: 542 gccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgcc 601 ||| |||| |||||||||||||| || |||||||||||||| ||||||||||||||| | Sbjct: 660 gccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctcgccttc 719 Query: 602 accgagatcatcaccggcgcgcc 624 |||||| || |||||||| |||| Sbjct: 720 accgagttcctcaccggctcgcc 742
>gb|AY105095.1| Zea mays PCO131564 mRNA sequence Length = 907 Score = 167 bits (84), Expect = 8e-38 Identities = 150/172 (87%) Strand = Plus / Plus Query: 464 gccgtgctgtccgtggcgtcgctggtgccactgctccagggcgagagcgccgagggcaga 523 ||||||||||||||||| ||||||||||| |||||| |||||| |||||||||| ||| Sbjct: 99 gccgtgctgtccgtggcctcgctggtgccgctgctcaggggcgacagcgccgaggccagg 158 Query: 524 gccggcaccatcatgaacgccaacgcggagctctggaacggccgcttcgccatgctcggt 583 |||| || |||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 agcggcgccgtcatgagcgccaacgccgagctctggaacggccgcttcgccatgctcggc 218 Query: 584 ctcgtcgcgctcgccgccaccgagatcatcaccggcgcgcccttcatcaacg 635 ||||||||||||||| ||| ||| | |||||||||| || |||||||||| Sbjct: 219 ctcgtcgcgctcgccttcactgagtacctcaccggcgcaccgttcatcaacg 270
>emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular mass early light-inducible protein (ELIP) (clone HV58) Length = 860 Score = 139 bits (70), Expect = 2e-29 Identities = 139/162 (85%) Strand = Plus / Plus Query: 473 tccgtggcgtcgctggtgccactgctccagggcgagagcgccgagggcagagccggcacc 532 ||||| ||||||||| |||| ||||| |||||| |||||| ||| ||| | || || | Sbjct: 611 tccgtagcgtcgctgctgccgctgctgcagggccagagcgtggagagcaaatccagcggc 670 Query: 533 atcatgaacgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcg 592 ||| || |||| |||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 671 atctggagcgccgacgccgagctctggaacggccgcttcgctatgctcggcctcgtcgcg 730 Query: 593 ctcgccgccaccgagatcatcaccggcgcgcccttcatcaac 634 ||||||||||||||| |||||||||||||||| ||| ||||| Sbjct: 731 ctcgccgccaccgagttcatcaccggcgcgccgttcgtcaac 772 Score = 131 bits (66), Expect = 4e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 294 cctcgatctgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggc 353 ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 429 cctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggc 488 Query: 354 tcgccatggtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcc 413 | |||||||||||||||||| ||||||| |||| ||||| | ||||||| ||||||| Sbjct: 489 tggccatggtaggcttcgtggctgcgctgtccgtcgaggcggcgcgtggcggtgggctcc 548 Query: 414 tc 415 || Sbjct: 549 tc 550
>gb|DQ246106.1| Zea mays clone 18246 mRNA sequence Length = 790 Score = 123 bits (62), Expect = 1e-24 Identities = 95/106 (89%) Strand = Plus / Plus Query: 541 cgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgc 600 |||| |||| ||||| |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 546 cgccgacgccgagctatggaacggccgcttcgccatgctcggcctcgtcgcactcgccgt 605 Query: 601 caccgagatcatcaccggcgcgcccttcatcaacgtgtaaaactag 646 ||||||| ||||||||||| |||||||| ||||||| | ||||||| Sbjct: 606 caccgagttcatcaccggcacgcccttcgtcaacgtctgaaactag 651 Score = 117 bits (59), Expect = 6e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 294 cctcgatctgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggc 353 ||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||| |||| Sbjct: 299 cctcggtctgggacgcgctcgcgttcagcgacccggcgccggagcgcatcaacggccggc 358 Query: 354 tcgccatggtaggcttcgtgactgcgctcgccgtggaggcaggacgtggcgacgggctcc 413 |||||||||| ||||||||| | || ||| |||| ||||| | || |||| |||||| | Sbjct: 359 tcgccatggtgggcttcgtggcggcactctccgtcgaggcggcgcgcggcggcgggctac 418 Query: 414 tctcgcagctcggcagcggcaccgggc 440 || ||| ||||||||||| |||||| Sbjct: 419 tcgaccaggtcggcagcggcgccgggc 445 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 120 taatggcaaccatgatgaccatgagctccttcgccggtgccgccgtc 166 ||||||| |||||| || || |||||||||||||||||||||||||| Sbjct: 65 taatggcgaccatggtggccttgagctccttcgccggtgccgccgtc 111
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || |||||||||| |||||||||||||| || ||| Sbjct: 9470816 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 9470757 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggc 393 || || |||||| | ||||||||||||||||| Sbjct: 9470756 gtggggttcgtgtcggcgctcgccgtggaggc 9470725
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || |||||||||| |||||||||||||| || ||| Sbjct: 84377 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 84318 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggc 393 || || |||||| | ||||||||||||||||| Sbjct: 84317 gtggggttcgtgtcggcgctcgccgtggaggc 84286
>gb|AF017357.1|AF017357 Oryza sativa low molecular early light-inducible protein mRNA, complete cds Length = 883 Score = 93.7 bits (47), Expect = 9e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 554 ctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgccaccgagatcatc 613 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||| || || Sbjct: 646 ctctggaacggccgcttcgccatgctcgggctcgtcgccctcgccttcaccgagttcctc 705 Query: 614 accggcgcgcccttcatcaacgt 636 |||||| | |||||| ||||||| Sbjct: 706 accggctctcccttcctcaacgt 728 Score = 65.9 bits (33), Expect = 2e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||| ||| || |||||||| || |||||||||||||| || ||| Sbjct: 395 tgggacgtgctggcgttca-cgggccggcgccggaacggatcaacgggcggctggcgatg 453 Query: 362 gtaggcttcgtgactgcgctcgccgtgga 390 || || |||||| | ||||| |||||||| Sbjct: 454 gtggggttcgtgtccgcgctggccgtgga 482 Score = 44.1 bits (22), Expect = 0.76 Identities = 58/70 (82%) Strand = Plus / Plus Query: 444 cgtggttcgcctactccgtggccgtgctgtccgtggcgtcgctggtgccactgctccagg 503 ||||||||||| | ||| |||||||| |||| |||||| |||||||| ||||||| | Sbjct: 536 cgtggttcgccgccaccgccgccgtgctctccgcggcgtccctggtgccgctgctccgcg 595 Query: 504 gcgagagcgc 513 |||| ||||| Sbjct: 596 gcgaaagcgc 605
>gb|AF017356.1|AF017356 Oryza sativa low molecular early light-inducible protein mRNA, complete cds Length = 818 Score = 93.7 bits (47), Expect = 9e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 554 ctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgccaccgagatcatc 613 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||| || || Sbjct: 581 ctctggaacggccgcttcgccatgctcgggctcgtcgccctcgccttcaccgagttcctc 640 Query: 614 accggcgcgcccttcatcaacgt 636 |||||| | |||||| ||||||| Sbjct: 641 accggctctcccttcctcaacgt 663 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||| ||| || |||||||| || |||||||||||||| || ||| Sbjct: 330 tgggacgtgctggcgttcaacgggccggcgccggaacggatcaacgggcggctggcgatg 389 Query: 362 gtaggcttcgtgactgcgctcgccgtgga 390 || || |||||| | |||||||||||||| Sbjct: 390 gtggggttcgtgtcggcgctcgccgtgga 418
>emb|CT829905.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN036B09, full insert sequence Length = 462 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 536 atgaacgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctc 595 |||| |||| |||| |||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 188 atgagcgccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctc 247 Query: 596 gccgccaccgagatcatcaccggcgcgcc 624 ||| ||||||| || |||||||| |||| Sbjct: 248 gccttcaccgagttcctcaccggctcgcc 276
>emb|CT829095.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN070L18, full insert sequence Length = 452 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 536 atgaacgccaacgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctc 595 |||| |||| |||| |||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 186 atgagcgccgacgccgagctctggaacgggcggttcgccatgctcggcctcgtcgcgctc 245 Query: 596 gccgccaccgagatcatcaccggcgcgcc 624 ||| ||||||| || |||||||| |||| Sbjct: 246 gccttcaccgagttcctcaccggctcgcc 274
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || || ||||||| |||||||||||||| || ||| Sbjct: 39914 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 39855 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggc 393 || || |||||| | | ||||||||||||||| Sbjct: 39854 gtggggttcgtgccggtgctcgccgtggaggc 39823
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || || ||||||| |||||||||||||| || ||| Sbjct: 17142090 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 17142031 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggc 393 || || |||||| | | ||||||||||||||| Sbjct: 17142030 gtggggttcgtgccggtgctcgccgtggaggc 17141999
>dbj|D85513.1| Oryza sativa (japonica cultivar-group) ELIP mRNA, partial sequence Length = 296 Score = 71.9 bits (36), Expect = 3e-09 Identities = 73/85 (85%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 536 atgaacgccaacgcggagctctggaac-ggccgcttcgccatgctcggtctcgtcgcgct 594 |||| |||| || | |||||||||||| || || |||||||||||||| ||||||||||| Sbjct: 37 atgancgccgacnccgagctctggaacnggncggttcgccatgctcggcctcgtcgcgct 96 Query: 595 cgccgccaccgagatcatcaccggc 619 |||| ||||||| || |||||||| Sbjct: 97 cgccttcaccgagttcctcaccggc 121
>emb|CR855076.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0135A16, complete sequence Length = 81776 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| |||||| |||||||| || |||||||||| |||||| ||||||| || ||| Sbjct: 29538 tgggacgtgctggccttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 29479 Query: 362 gtaggcttcgtgactgcgctcgccgtggaggc 393 || || |||||| | || ||||||||||||| Sbjct: 29478 gtggggttcgtgccggctttcgccgtggaggc 29447
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || |||||||||| |||||| ||||||| || ||| Sbjct: 11129061 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 11129002 Query: 362 gtaggcttcgt 372 || || ||||| Sbjct: 11129001 gtggggttcgt 11128991
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 302 tgggacgcgctggcgttcagcggcccagcgccggagcgcatcaacgggcggctcgccatg 361 ||||||| ||||||||||||||| || |||||||||| |||||| ||||||| || ||| Sbjct: 137716 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 137657 Query: 362 gtaggcttcgt 372 || || ||||| Sbjct: 137656 gtggggttcgt 137646
>emb|AJ242806.1|SST242806 Sporobolus stapfianus partial mRNA for putative early light-inducible protein (ELIP) Length = 246 Score = 58.0 bits (29), Expect = 5e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 546 acgcggagctctggaacggccgcttcgccatgctcggtctcgtcgcgctcgccgccaccg 605 |||| |||||||||||||||||| ||||||||| || |||||||||| || ||||||| Sbjct: 6 acgccgagctctggaacggccgcgccgccatgcttgggatcgtcgcgcttgcagccaccg 65 Query: 606 a 606 | Sbjct: 66 a 66
>emb|BX571673.8| Human DNA sequence from clone RP11-323D18 on chromosome 1 Contains a novel gene, a tubulin beta polypeptide 4 member Q (TUBB4Q) pseudogene, the 3' end of a ribosomal protein L23a (RPL23A) pseudogene and a CpG island, complete sequence Length = 171915 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tagcaagtactgcaatcatctg 49 |||||||||||||||||||||| Sbjct: 121278 tagcaagtactgcaatcatctg 121299
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Plus Query: 463 ggccgtgctgtccgtggcgtcgctggtgcc 492 |||||||||| |||||||||||| |||||| Sbjct: 75946 ggccgtgctgaccgtggcgtcgccggtgcc 75975
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 423 tcggcagcggcaccgggcaggcgtg 447 |||||||||||||||||| |||||| Sbjct: 1544135 tcggcagcggcaccgggcgggcgtg 1544111
>gb|DQ653303.1| Arabidopsis thaliana clone 0000010990_0000008098 unknown gene Length = 1332 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ttccttctcttcttcgtccaccttc 105 ||||||||||||||| ||||||||| Sbjct: 1116 ttccttctcttcttcttccaccttc 1092
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 tcggtctcgtcgcgctcgccg 599 ||||||||||||||||||||| Sbjct: 4316162 tcggtctcgtcgcgctcgccg 4316182
>emb|CR847540.6| Zebrafish DNA sequence from clone CH211-59K6 in linkage group 24, complete sequence Length = 174264 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 731 tatactaattaaagacagctcatacacta 759 |||||||||||||||||| | |||||||| Sbjct: 132351 tatactaattaaagacagataatacacta 132379
>emb|CR759424.7| Zebrafish DNA sequence from clone DKEY-100G2 in linkage group 24, complete sequence Length = 113094 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 731 tatactaattaaagacagctcatacacta 759 |||||||||||||||||| | |||||||| Sbjct: 46049 tatactaattaaagacagataatacacta 46077
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 cgccaccgagatcatcaccgg 618 ||||||||||||||||||||| Sbjct: 3187548 cgccaccgagatcatcaccgg 3187528
>gb|DQ446981.1| Arabidopsis thaliana clone pENTR221-At5g24880 unknown (At5g24880) gene, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ttccttctcttcttcgtccaccttc 105 ||||||||||||||| ||||||||| Sbjct: 1116 ttccttctcttcttcttccaccttc 1092
>ref|NM_122397.1| Arabidopsis thaliana unknown protein (AT5G24880) mRNA, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ttccttctcttcttcgtccaccttc 105 ||||||||||||||| ||||||||| Sbjct: 1116 ttccttctcttcttcttccaccttc 1092
>gb|AY209185.1| Trypanosoma cruzi RNA-binding protein 4 (rbp-4) mRNA, complete cds Length = 432 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttccttctcttcttcgtccac 101 ||||||||||||||||||||| Sbjct: 429 ttccttctcttcttcgtccac 409
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 gcttcgccatgctcggtctcg 587 ||||||||||||||||||||| Sbjct: 53500 gcttcgccatgctcggtctcg 53480
>ref|XM_798798.1| Trypanosoma cruzi strain CL Brener RNA-binding protein 4 (Tc00.1047053508901.20) partial mRNA Length = 1470 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttccttctcttcttcgtccac 101 ||||||||||||||||||||| Sbjct: 1467 ttccttctcttcttcgtccac 1447
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gccgcttcgccatgctcggtc 584 ||||||||||||||||||||| Sbjct: 1318656 gccgcttcgccatgctcggtc 1318636
>gb|AC007198.6|AC007198 Homo sapiens, clone 18_A_13, complete sequence Length = 166977 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ctgtagcttccttctcttctt 94 ||||||||||||||||||||| Sbjct: 10513 ctgtagcttccttctcttctt 10533
>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete sequence Length = 99123 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 ttccttctcttcttcgtccaccttc 105 ||||||||||||||| ||||||||| Sbjct: 59907 ttccttctcttcttcttccaccttc 59931 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 121,333,719 Number of extensions: 6491856 Number of successful extensions: 140955 Number of sequences better than 10.0: 48 Number of HSP's gapped: 140947 Number of HSP's successfully gapped: 86 Length of query: 800 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 778 Effective length of database: 18,508,616,841 Effective search space: 14399703902298 Effective search space used: 14399703902298 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
