ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5f24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P14009:14KD_DAUCA 14 kDa proline-rich protein DC2.15 precursor -... 89 2e-17
2Q01595:CCDP_MAIZE Cortical cell-delineating protein precursor - ... 81 5e-15
3Q00451:PRF1_SOLLC 36.4 kDa proline-rich protein - Solanum lycope... 69 3e-11
4P24337:HPSE_SOYBN Hydrophobic seed protein - Glycine max (Soybean) 55 3e-07

>P14009:14KD_DAUCA 14 kDa proline-rich protein DC2.15 precursor - Daucus carota|
           (Carrot)
          Length = 137
 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 44/82 (53%), Positives = 53/82 (64%)
 Frame = +2

Query: 254 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLDGLADLEAAVCLCTALKANVLGIVLN 433
           D LKLG CA+                   CCSLL+GL +LEAAVCLCTA+KAN+LG  LN
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTLP--CCSLLEGLVNLEAAVCLCTAIKANILGKNLN 114

Query: 434 IPVKLSLLLNYCGKTAPKGFQC 499
           +P+ LSL+LN CGK  P GF+C
Sbjct: 115 LPIALSLVLNNCGKQVPNGFEC 136



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>Q01595:CCDP_MAIZE Cortical cell-delineating protein precursor - Zea mays (Maize)|
          Length = 129

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = +2

Query: 254 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLDGLADLEAAVCLCTALKANVLGIVLN 433
           D LKL  CA                  ++CC LL+GL DL+AA+CLCTA+KANVLGI LN
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLN 105

Query: 434 IPVKLSLLLNYCGKTAPKGFQC 499
           +P+ L+ +LN CG+  P+ F C
Sbjct: 106 VPLSLNFILNNCGRICPEDFTC 127



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>Q00451:PRF1_SOLLC 36.4 kDa proline-rich protein - Solanum lycopersicum (Tomato)|
           (Lycopersicon esculentum)
          Length = 346

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 33/82 (40%), Positives = 46/82 (56%)
 Frame = +2

Query: 254 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLDGLADLEAAVCLCTALKANVLGIVLN 433
           D LKLGAC +                   CC LL GL DL+AA+CLCT ++  +L I + 
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAK--QTCCPLLGGLVDLDAAICLCTTIRLKLLNINII 321

Query: 434 IPVKLSLLLNYCGKTAPKGFQC 499
           +P+ L +L++ CGK  PK F+C
Sbjct: 322 LPIALQVLIDDCGKYPPKDFKC 343



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>P24337:HPSE_SOYBN Hydrophobic seed protein - Glycine max (Soybean)|
          Length = 80

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +2

Query: 335 DKCCSLLDGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYCGKTAPKGFQC 499
           D CC+L+ GL D+EA VCLC  L+A  LGI LN+   L L+LN CG++ P    C
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATC 77


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 102,934,539
Number of extensions: 1883299
Number of successful extensions: 4130
Number of sequences better than 10.0: 4
Number of HSP's gapped: 4126
Number of HSP's successfully gapped: 4
Length of query: 286
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 174
Effective length of database: 69,965,399
Effective search space: 12173979426
Effective search space used: 12173979426
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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