ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5c08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063196:Os10g0505700 | 108 | 4e-24 | 2 | AK062506:Os03g0111300 | 94 | 7e-20 | 3 | Os10g0505000:Os10g0505000 | 89 | 2e-18 | 4 | AK063117:Os10g0504900 | 88 | 5e-18 | 5 | AK062529:Os10g0505500 | 83 | 2e-16 | 6 | AK062463:Os05g0550300 | 72 | 4e-13 | 7 | AK107901:Os11g0620300 | 70 | 1e-12 | 8 | AJ704770:Os11g0620300 | 70 | 1e-12 | 9 | AK062667:Os06g0705400 | 67 | 2e-11 | 10 | AK122117:Os01g0691100 | 65 | 3e-11 | 11 | AK064045:Os01g0691100 | 65 | 3e-11 | 12 | AK119689:Os05g0550600 | 60 | 2e-09 | 13 | AK063729:Os05g0550600 | 60 | 2e-09 | 14 | AK105204:Os07g0287400 | 31 | 0.73 | 15 | AK100306:Os07g0616800 | 30 | 2.1 | 16 | Os10g0148000:Os10g0148000 | 29 | 2.8 | 17 | AK106592:Os08g0396700 | 28 | 6.1 | 18 | AK102211:Os08g0396700 | 28 | 6.1 | 19 | AK107486:Os05g0493400 | 28 | 6.2 | 20 | AK106790:Os04g0462200 | 28 | 6.2 |
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>AK063196:Os10g0505700 | Length = 91 Score = 108 bits (270), Expect = 4e-24 Identities = 45/64 (70%), Positives = 55/64 (85%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328 QCNAG L +CAG II G+ PS +CC+NL+ QRGCFCQ+ARNPAY++YINS NARKTL SC Sbjct: 25 QCNAGQLAICAGAIIGGSTPSASCCSNLRAQRGCFCQYARNPAYASYINSANARKTLTSC 84 Query: 329 GVAV 340 G+A+ Sbjct: 85 GIAI 88
>AK062506:Os03g0111300 | Length = 96 Score = 94.4 bits (233), Expect = 7e-20 Identities = 37/63 (58%), Positives = 49/63 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331 CNAG LTVC G I G P+ CC++L+ Q+GCFCQFA++P Y Y+NSPNARK ++SCG Sbjct: 30 CNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCG 89 Query: 332 VAV 340 +A+ Sbjct: 90 IAL 92
>Os10g0505000:Os10g0505000 | Length = 100 Score = 89.4 bits (220), Expect = 2e-18 Identities = 38/65 (58%), Positives = 51/65 (78%), Gaps = 2/65 (3%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQR--GCFCQFARNPAYSTYINSPNARKTLA 322 QC+ G L+ CA PI GT PS++CC+NL+ Q GCFCQ+AR+P Y++YINS NAR T+A Sbjct: 32 QCDPGKLSACAVPIFFGTAPSKSCCSNLRAQEKDGCFCQYARDPMYASYINSTNARNTIA 91 Query: 323 SCGVA 337 +CG+A Sbjct: 92 ACGIA 96
>AK063117:Os10g0504900 | Length = 82 Score = 88.2 bits (217), Expect = 5e-18 Identities = 35/61 (57%), Positives = 49/61 (80%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331 C+ G L+ CA PI GT PS +CC++LK Q+GCFCQ+A++P Y++YINS NARK +A+CG Sbjct: 16 CDPGLLSPCAAPIFFGTAPSASCCSSLKAQQGCFCQYAKDPTYASYINSTNARKMIAACG 75 Query: 332 V 334 + Sbjct: 76 I 76
>AK062529:Os10g0505500 | Length = 94 Score = 83.2 bits (204), Expect = 2e-16 Identities = 32/66 (48%), Positives = 50/66 (75%), Gaps = 2/66 (3%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQR--GCFCQFARNPAYSTYINSPNARKTLA 322 QC+ L+ C PI GT PS++CC+NL+ Q+ GC CQ+A++P Y++Y+N+ NARKT+A Sbjct: 26 QCDPEQLSACVSPIFYGTAPSESCCSNLRAQQKEGCLCQYAKDPTYASYVNNTNARKTIA 85 Query: 323 SCGVAV 340 +CG+ + Sbjct: 86 ACGIPI 91
>AK062463:Os05g0550300 | Length = 94 Score = 72.0 bits (175), Expect = 4e-13 Identities = 30/63 (47%), Positives = 41/63 (65%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331 C+A L+ CA II PS +CC+ +K Q+ C CQ+AR+P Y+NSPN +K LA+C Sbjct: 29 CDALQLSPCASAIIGNASPSASCCSRMKEQQPCLCQYARDPNLQRYVNSPNGKKVLAACH 88 Query: 332 VAV 340 V V Sbjct: 89 VPV 91
>AK107901:Os11g0620300 | Length = 110 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/62 (48%), Positives = 38/62 (61%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328 +CN LT CAGP + G CCA L+ Q C C +AR+P Y +YI SPNAR+ A C Sbjct: 43 RCNPTLLTPCAGPALFGGPVPPACCAQLRAQAACLCAYARSPNYGSYIRSPNARRLFAVC 102 Query: 329 GV 334 G+ Sbjct: 103 GL 104
>AJ704770:Os11g0620300 | Length = 110 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/62 (48%), Positives = 38/62 (61%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328 +CN LT CAGP + G CCA L+ Q C C +AR+P Y +YI SPNAR+ A C Sbjct: 43 RCNPTLLTPCAGPALFGGPVPPACCAQLRAQAACLCAYARSPNYGSYIRSPNARRLFAVC 102 Query: 329 GV 334 G+ Sbjct: 103 GL 104
>AK062667:Os06g0705400 | Length = 94 Score = 66.6 bits (161), Expect = 2e-11 Identities = 25/61 (40%), Positives = 40/61 (65%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331 CN +L+ C I+ G PS CC L+ Q+ C CQ+AR+P+Y +Y+ SP+A++ + +C Sbjct: 30 CNPSALSPCMSAIMLGAAPSPGCCVQLRAQQPCLCQYARDPSYRSYVTSPSAQRAVKACN 89 Query: 332 V 334 V Sbjct: 90 V 90
>AK122117:Os01g0691100 | Length = 103 Score = 65.5 bits (158), Expect = 3e-11 Identities = 28/62 (45%), Positives = 39/62 (62%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328 +C+ +L CA I+ G PS CCA L+ Q+ C C++A+NP YINS N+RK A+C Sbjct: 37 KCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAAC 96 Query: 329 GV 334 V Sbjct: 97 SV 98
>AK064045:Os01g0691100 | Length = 103 Score = 65.5 bits (158), Expect = 3e-11 Identities = 28/62 (45%), Positives = 39/62 (62%) Frame = +2 Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328 +C+ +L CA I+ G PS CCA L+ Q+ C C++A+NP YINS N+RK A+C Sbjct: 37 KCDPLALRPCAAAILWGEAPSTACCAGLRAQKRCLCRYAKNPDLRKYINSQNSRKVAAAC 96 Query: 329 GV 334 V Sbjct: 97 SV 98
>AK119689:Os05g0550600 | Length = 96 Score = 59.7 bits (143), Expect = 2e-09 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLK-NQRGCFCQFARNPAYSTYINSPNARKTLASC 328 C LT CA I+ + P+ CC LK + CFCQ+ ++P Y+NSPN +K A+C Sbjct: 30 CTPTQLTPCAPAIVGNSPPTAACCGKLKAHPASCFCQYKKDPNMKKYVNSPNGKKVFATC 89 Query: 329 GV 334 V Sbjct: 90 KV 91
>AK063729:Os05g0550600 | Length = 96 Score = 59.7 bits (143), Expect = 2e-09 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLK-NQRGCFCQFARNPAYSTYINSPNARKTLASC 328 C LT CA I+ + P+ CC LK + CFCQ+ ++P Y+NSPN +K A+C Sbjct: 30 CTPTQLTPCAPAIVGNSPPTAACCGKLKAHPASCFCQYKKDPNMKKYVNSPNGKKVFATC 89 Query: 329 GV 334 V Sbjct: 90 KV 91
>AK105204:Os07g0287400 | Length = 104 Score = 31.2 bits (69), Expect = 0.73 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +2 Query: 200 TMPSQTCCANLKN-QRGCFCQFARNPAYSTYINSPN-ARKTLASCGVAV 340 T PS CC+ L + C C + +P S Y PN A + A CG+ + Sbjct: 52 TNPSAGCCSALSHADLNCLCSYKNSPWLSIYNIDPNRAMQLPAKCGLTM 100
>AK100306:Os07g0616800 | Length = 816 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = +1 Query: 196 RDHAVADVLRQPKE----PAWVLLPVRAQPGV 279 +D A+ DVLR +E P W+ L +R +PGV Sbjct: 68 KDSALEDVLRGAQEAIVIPPWIALAIRPRPGV 99
>Os10g0148000:Os10g0148000 | Length = 115 Score = 29.3 bits (64), Expect = 2.8 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Frame = +2 Query: 206 PSQTCCANLKNQR-GCFCQFARNPAYSTYINSPNARKTLASCGVAV 340 PS CC ++K C C + +P IN CG+A+ Sbjct: 55 PSPDCCTSMKGVNVPCVCTYLGSPGVRDNINMDKVFYVTKQCGIAI 100
>AK106592:Os08g0396700 | Length = 486 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +3 Query: 441 VRTSSSHGYWYDVRRTAPCESCVHVSCAR---IKMVWTCRSS 557 VRT++ GY ++RR + C C C + W+ RSS Sbjct: 384 VRTANVKGYVMELRRVSACSRCCICMCGKEGYRNKFWSYRSS 425
>AK102211:Os08g0396700 | Length = 846 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +3 Query: 441 VRTSSSHGYWYDVRRTAPCESCVHVSCAR---IKMVWTCRSS 557 VRT++ GY ++RR + C C C + W+ RSS Sbjct: 707 VRTANVKGYVMELRRVSACSRCCICMCGKEGYRNKFWSYRSS 748
>AK107486:Os05g0493400 | Length = 159 Score = 28.1 bits (61), Expect = 6.2 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +2 Query: 476 RPSNSSVRIVCSCIVCKNKNG 538 R SNS +I CSC++C ++ G Sbjct: 42 RSSNSLSKISCSCLICLDRRG 62
>AK106790:Os04g0462200 | Length = 200 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Frame = +2 Query: 152 CNAGSLTV--CAGPII-SGTMPSQTCCANL----KNQRGCFCQ 259 CNAG + + C G + + PS TCCANL ++ C CQ Sbjct: 39 CNAGLIRLLPCLGFVGGNNAAPSNTCCANLGSMVHDEPLCLCQ 81 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,467,902 Number of extensions: 265119 Number of successful extensions: 784 Number of sequences better than 10.0: 20 Number of HSP's gapped: 778 Number of HSP's successfully gapped: 20 Length of query: 238 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 140 Effective length of database: 11,475,837 Effective search space: 1606617180 Effective search space used: 1606617180 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
