>LOC_Os10g36170:12010.t02902:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 586
Score = 126 bits (270), Expect = 2e-28
Identities = 45/64 (70%), Positives = 55/64 (85%)
Frame = +2 / +3
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328
QCNAG L +CAG II G+ PS +CC+NL+ QRGCFCQ+ARNPAY++YINS NARKTL SC
Sbjct: 147 QCNAGQLAICAGAIIGGSTPSASCCSNLRAQRGCFCQYARNPAYASYINSANARKTLTSC 326
Query: 329 GVAV 340
G+A+
Sbjct: 327 GIAI 338
Score = 75.8 bits (159), Expect = 3e-13
Identities = 35/53 (66%), Positives = 36/53 (67%)
Frame = -2 / -1
Query: 336 ATPHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPA 178
A P E RVLRAL LLM* YAGLRA WQKHP RL QH DG+ P MI PA
Sbjct: 334 AMPQEVRVLRALALLM*EAYAGLRAYWQKHPLCARRLEQHDADGVDPPMIAPA 176
Score = 50.6 bits (104), Expect = 1e-05
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -1 / -3
Query: 259 LAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVALSR 143
LAEAP L VGAAR RR PA+DRA A R+ P VAL R
Sbjct: 257 LAEAPPLRAQVGAARRRRRRPADDRARADRQLPGVALRR 141
Score = 46.4 bits (95), Expect = 2e-04
Identities = 25/46 (54%), Positives = 26/46 (56%)
Frame = +1 / +2
Query: 154 QRGEPHGVRWPDH*RDHAVADVLRQPKEPAWVLLPVRAQPGVLHLH 291
QR +R DH R AV VL QP VLLPVRAQPGV LH
Sbjct: 152 QRRAAGDLRGRDHRRVDAVGVVLLQPARAEGVLLPVRAQPGVRLLH 289
Score = 32.2 bits (64), Expect = 4.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 278 TPGCARTGRSTHAGSLG 228
TPGCARTGRST + G
Sbjct: 276 TPGCARTGRSTPSARAG 226
>LOC_Os03g02050:12003.t00097:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 811
Score = 109 bits (233), Expect = 2e-23
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +2 / +1
Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331
CNAG LTVC G I G P+ CC++L+ Q+GCFCQFA++P Y Y+NSPNARK ++SCG
Sbjct: 139 CNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCG 318
Query: 332 VAV 340
+A+
Sbjct: 319 IAL 327
Score = 57.4 bits (119), Expect = 1e-07
Identities = 29/56 (51%), Positives = 29/56 (51%)
Frame = -2 / -3
Query: 336 ATPHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAHTV 169
A P E LRALGLL * G ANWQK P RL QH G P I P HTV
Sbjct: 323 AMPQEETALRALGLLT*RP*RGSLANWQKQPCCARRLEQHAAVGRAPPAIAPVHTV 156
Score = 43.7 bits (89), Expect = 0.001
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 262 ELAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVA 152
ELAEA L GAAR RR PA DR AHR+ P VA
Sbjct: 249 ELAEAALLRPQAGAARRRRPRPARDRPRAHRQLPSVA 139
>LOC_Os10g36100:12010.t02895:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 563
Score = 104 bits (222), Expect = 6e-22
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +2 / +3
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328
QC+ G L+ CA PI GT PS +CC++LK Q+GCFCQ+A++P Y++YINS NARK +A+C
Sbjct: 174 QCDPGLLSPCAAPIFFGTAPSASCCSSLKAQQGCFCQYAKDPTYASYINSTNARKMIAAC 353
Query: 329 GV 334
G+
Sbjct: 354 GI 359
Score = 65.7 bits (137), Expect = 3e-10
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 330 PHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAH 175
P A +LRAL LLM* Y G A WQKHP FRL QH DG VP IG AH
Sbjct: 355 PQAAIILRALVLLM*DAYVGSFAYWQKHPCCAFRLEQHDADGAVPKKIGAAH 200
Score = 39.6 bits (80), Expect(2) = 0.001
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = -1 / -1
Query: 259 LAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVALSR 143
LAEAP L AAR RR P DR A R+ P V L R
Sbjct: 284 LAEAPLLCFQARAARRRRRRPEEDRGRAWRQQPGVTLRR 168
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 278 TPGCARTGRSTHA 240
T G +RTGRST A
Sbjct: 303 TSGLSRTGRSTPA 265
Score = 39.6 bits (80), Expect = 0.025
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1 / +2
Query: 175 VRWPDH*RDHAVADVLRQPKEPAWVLLPVRAQPGVLHLH 291
+R PD RD AV VL P+ A VLLPVR +P V LH
Sbjct: 200 MRGPDLLRDGAVGVVLL*PESTAGVLLPVRERPDVRVLH 316
>LOC_Os10g36070:12010.t02893:unspliced-genomic nonspecific lipid-transfer protein precursor, putative|
Length = 303
Score = 104 bits (222), Expect = 6e-22
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +2 / +1
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328
QC+ G L+ CA PI GT PS +CC++LK Q+GCFCQ+A++P Y++YINS NARK +A+C
Sbjct: 97 QCDPGLLSPCAAPIFFGTAPSASCCSSLKAQQGCFCQYAKDPTYASYINSTNARKMIAAC 276
Query: 329 GV 334
G+
Sbjct: 277 GI 282
Score = 65.7 bits (137), Expect = 3e-10
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 330 PHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAH 175
P A +LRAL LLM* Y G A WQKHP FRL QH DG VP IG AH
Sbjct: 278 PQAAIILRALVLLM*DAYVGSFAYWQKHPCCAFRLEQHDADGAVPKKIGAAH 123
Score = 40.5 bits (82), Expect = 0.013
Identities = 21/39 (53%), Positives = 22/39 (56%)
Frame = -1 / -1
Query: 259 LAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVALSR 143
LAEAP L AAR RR P DR A R+ P VAL R
Sbjct: 207 LAEAPLLCFQARAARRRRRRPEEDRGRAWRQQPGVALWR 91
Score = 37.7 bits (76), Expect = 0.088
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 175 VRWPDH*RDHAVADVLRQPKEPAWVLLPVRAQPGVLHLH 291
+R PD RD AV VL P+ VLLPVR +P V LH
Sbjct: 123 MRGPDLLRDGAVGVVLL*PESTTGVLLPVRERPDVRVLH 239
>LOC_Os10g36090:12010.t02894:unspliced-genomic nonspecific lipid-transfer protein precursor, putative|
Length = 303
Score = 104 bits (221), Expect = 9e-22
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +2 / +1
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328
QC+ G L+ CA PI GT PS +CC++LK Q+GCFCQ+A++P Y++YINS NARK +A+C
Sbjct: 97 QCDPGLLSPCAAPIFFGTAPSASCCSSLKAQQGCFCQYAKDPMYASYINSTNARKMIAAC 276
Query: 329 GV 334
G+
Sbjct: 277 GI 282
Score = 65.2 bits (136), Expect = 5e-10
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 330 PHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAH 175
P A +LRAL LLM* Y G A WQKHP FRL QH DG VP IG AH
Sbjct: 278 PQAAIILRALVLLM*DAYIGSFAYWQKHPCCAFRLEQHDADGAVPKKIGAAH 123
Score = 39.6 bits (80), Expect = 0.025
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = -1 / -1
Query: 259 LAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVALSR 143
LAEAP L AAR RR P DR A R+ P V L R
Sbjct: 207 LAEAPLLCFQARAARRRRRRPEEDRGRAWRQQPGVTLRR 91
Score = 38.2 bits (77), Expect = 0.064
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 175 VRWPDH*RDHAVADVLRQPKEPAWVLLPVRAQPGVLHLH 291
+R PD RD AV VL P+ VLLPVR +P V LH
Sbjct: 123 MRGPDLLRDGAVGVVLL*PESTTGVLLPVRERPNVRVLH 239
>LOC_Os10g36110:12010.t02896:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 604
Score = 63.4 bits (132), Expect(2) = 1e-18
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +2 / +1
Query: 245 GCFCQFARNPAYSTYINSPNARKTLASCGVA 337
GCFCQ+AR+P Y++YINS NAR T+A+CG+A
Sbjct: 196 GCFCQYARDPMYASYINSTNARNTIAACGIA 288
Score = 49.6 bits (102), Expect(2) = 1e-18
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2 / +1
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFC 256
QC+ G L+ CA PI GT PS++CC+NL+ Q C
Sbjct: 94 QCDPGKLSACAVPIFFGTAPSKSCCSNLRAQEKDGC 201
Score = 42.3 bits (86), Expect(2) = 1e-09
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = -2 / -3
Query: 336 ATPHEARVLRALGLLM*VEYAGLRANWQKHP 244
A P A VLRAL LLM* Y G A WQKHP
Sbjct: 287 AMPQAAMVLRALVLLM*DAYIGSLAYWQKHP 195
Score = 40.0 bits (81), Expect(2) = 1e-09
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -1 / -2
Query: 229 VGAARLRRHGPANDRASAHREAPRVALSR 143
VGAARLRR P DR A R+ P +AL R
Sbjct: 174 VGAARLRRRSPKEDRDRARRQLPGIALHR 88
>LOC_Os10g36160:12010.t02901:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 605
Score = 60.2 bits (125), Expect(2) = 1e-16
Identities = 17/36 (47%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 233 KNQRGCFCQFARNPAYSTYINSPNARKTLASCGVAV 340
+ + GC CQ+A++P Y++Y+N+ NARKT+A+CG+ +
Sbjct: 242 QQKEGCLCQYAKDPTYASYVNNTNARKTIAACGIPI 349
Score = 46.0 bits (94), Expect(2) = 1e-16
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQR 244
QC+ L+ C PI GT PS++CC+NL+ Q+
Sbjct: 152 QCDPEQLSACVSPIFYGTAPSESCCSNLRAQQ 247
Score = 36.8 bits (74), Expect(2) = 3e-05
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -2 / -3
Query: 330 PHEARVLRALGLLM*VEYAGLRANWQKHP 244
P A VLRAL LL * Y G A WQ+HP
Sbjct: 339 PQAAMVLRALVLLT*DAYVGSFAYWQRHP 253
Score = 30.4 bits (60), Expect(2) = 3e-05
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -1 / -2
Query: 241 LVL*VGAARLRRHGPANDRASAHREAPRVALSR 143
L *VGAARL P DRA A R RV L R
Sbjct: 244 LCA*VGAARL*WRRPVEDRAHARR*LLRVTLRR 146
>LOC_Os05g47700:12005.t04205:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 707
Score = 83.1 bits (175), Expect = 2e-15
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2 / +1
Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331
C+A L+ CA II PS +CC+ +K Q+ C CQ+AR+P Y+NSPN +K LA+C
Sbjct: 256 CDALQLSPCASAIIGNASPSASCCSRMKEQQPCLCQYARDPNLQRYVNSPNGKKVLAACH 435
Query: 332 VAV 340
V V
Sbjct: 436 VPV 444
Score = 34.1 bits (68), Expect = 1.1
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1 / -3
Query: 259 LAEAPTLVL*VGAARLRRHGPANDRASAHREAPRVALSRSP 137
LA+A L+L AAR RR +DRA A R+ RVA P
Sbjct: 363 LAQARLLLLHPAAARRRRRRVPDDRARARRQLQRVARRLRP 241
>LOC_Os11g40530:12011.t03594:unspliced-genomic nonspecific lipid-transfer protein 2, putative, expressed|
Length = 527
Score = 80.8 bits (170), Expect = 1e-14
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2 / +1
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASC 328
+CN LT CAGP + G CCA L+ Q C C +AR+P Y +YI SPNAR+ A C
Sbjct: 154 RCNPTLLTPCAGPALFGGPVPPACCAQLRAQAACLCAYARSPNYGSYIRSPNARRLFAVC 333
Query: 329 GV 334
G+
Sbjct: 334 GL 339
Score = 37.7 bits (76), Expect = 0.088
Identities = 23/54 (42%), Positives = 26/54 (48%)
Frame = -2 / -1
Query: 330 PHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAHTV 169
P A+ ALGLLM*+ GLRA +H AQH P GPAH V
Sbjct: 335 PQTAKRRLALGLLM*LP*LGLRAYAHRHAACARSCAQHAGGTGPPNSAGPAHGV 174
>LOC_Os06g49190:12006.t04603:unspliced-genomic nonspecific lipid-transfer protein precursor, putative, expressed|
Length = 648
Score = 76.7 bits (161), Expect = 2e-13
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2 / +3
Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTLASCG 331
CN +L+ C I+ G PS CC L+ Q+ C CQ+AR+P+Y +Y+ SP+A++ + +C
Sbjct: 198 CNPSALSPCMSAIMLGAAPSPGCCVQLRAQQPCLCQYARDPSYRSYVTSPSAQRAVKACN 377
Query: 332 V 334
V
Sbjct: 378 V 380
Score = 31.8 bits (63), Expect = 5.5
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = -2 / -3
Query: 333 TPHEARVLRALGLLM*VEYAGLRANWQKHPRWFFRLAQHVCDGMVPLMIGPAH 175
T H ALGL+ *+ G RA W +H Q DG P MI H
Sbjct: 379 TLHALTARCALGLVT*LR*DGSRAYWHRHGCCARSCTQQPGDGAAPSMIALMH 221
>LOC_Os10g40740:12010.t03314:unspliced-genomic long hypocotyl in far-red 1, putative, expressed|
Length = 2593
Score = 29.9 bits (59), Expect(2) = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2 / -3
Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFC 256
C AG AG + SGT+PS C ++ C
Sbjct: 2183 CLAGPAAAAAGGLASGTLPSSGCTPPCRSVAAHIC 2079
Score = 24.9 bits (48), Expect(2) = 1.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3 / -3
Query: 468 WYDVRRTAPCESC 506
W +RR PC SC
Sbjct: 1835 WARIRRPGPCSSC 1797
>LOC_Os08g04280:12008.t00323:unspliced-genomic actin-like protein 6A, putative, expressed|
Length = 9165
Score = 29.9 bits (59), Expect(2) = 3.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3 / +3
Query: 519 CARIKMVWTCRSSLCVICYSFVNFDRW 599
C ++++CRS +C Y+F+ RW
Sbjct: 5988 CLLFPVLFSCRSGICKRSYNFI*ASRW 6068
Score = 25.4 bits (49), Expect(2) = 3.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2 / +1
Query: 149 QCNAGSLTVCAGPIISGTMPSQTCCANLKNQR 244
QCN VC PII S T ++LK +R
Sbjct: 520 QCNPTGNFVCFLPIILSCFRSLTLNSDLKKKR 615
>LOC_Os11g29550:12011.t02559:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 1756
Score = 26.7 bits (52), Expect(2) = 3.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3 / -1
Query: 530 YSCTRYMNTRFARSCSTDVVP 468
YSC ++N R CS VVP
Sbjct: 598 YSCLPHLNHRGTNPCSDGVVP 536
Score = 26.3 bits (51), Expect(2) = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 576 SNKLRRGWIYTSTP 535
S LRRGWI TS P
Sbjct: 1645 SGDLRRGWISTSPP 1604
>LOC_Os12g34860:12012.t03174:unspliced-genomic ATP binding protein, putative, expressed|
Length = 5438
Score = 27.6 bits (54), Expect(2) = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 36 PRYVLLRSKVSPAIWRKPQRCSC 104
PR +LL + SPA +R+P+R C
Sbjct: 108 PRALLLLASRSPASFRRPRRRRC 176
Score = 26.3 bits (51), Expect(2) = 5.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 185 PIISGTMPSQTCC 223
PI+ G MPS+ CC
Sbjct: 1743 PILYGLMPSKACC 1781
>LOC_Os03g44820:12003.t03866:unspliced-genomic glutamyl-tRNA, putative, expressed|
Length = 2113
Score = 24.4 bits (47), Expect(2) = 7.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 223 AARLRRHGPANDRASAHREAPRV 155
A + + H P + R S+HRE +
Sbjct: 416 AQQAKHHQPPSQRVSSHRETREI 348
Score = 24.0 bits (46), Expect(2) = 7.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 53 QKYVPRWSGGTG 18
++ VPRW GG G
Sbjct: 318 ERCVPRWRGGAG 283
>LOC_Os02g02590:12002.t00158:unspliced-genomic pentatricopeptide repeat protein PPR566-6, putative, expressed|
Length = 2995
Score = 29.0 bits (57), Expect(2) = 9.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2 / +3
Query: 161 GSLTVCAGPIISGTMPSQTCC 223
GSL VC PIIS + CC
Sbjct: 300 GSLIVCVFPIISAVLIHHLCC 362
Score = 23.1 bits (44), Expect(2) = 9.7
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3 / +1
Query: 504 CVHVSCARIKMVWTCRSSLCVICYS 578
C H++ I C+ LCVI ++
Sbjct: 2800 CWHLTSMDIAQKLNCKIRLCVIAFN 2874
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 225,218,626
Number of extensions: 2975887
Number of successful extensions: 15894
Number of sequences better than 10.0: 33
Length of query: 238
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 189
Effective length of database: 52,856,264
Effective search space: 9989833896
Effective search space used: 9989833896
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)