ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4h11 |
|---|---|
| Clone Library Name | barley_pub |
>Q7Y1X1:EST_HEVBR Esterase precursor - Hevea brasiliensis (Para rubber tree)| Length = 391 Score = 169 bits (429), Expect = 2e-41 Identities = 118/353 (33%), Positives = 167/353 (47%), Gaps = 21/353 (5%) Frame = +2 Query: 185 YSRVFSFGDSLTDTGN--AAILPATAGGPFSHAPYGETYFHHPSGRASDGRLIIDFIVES 358 + +F+FGDS +DTG AA P + PYGET+FH +GR SDGRLIIDFI ES Sbjct: 32 FPAIFNFGDSNSDTGGKAAAFYPL-------NPPYGETFFHRSTGRYSDGRLIIDFIAES 84 Query: 359 LGLPQPPPYLAGETADDFRRGANFAVGGATA-LDPAFLKSRGIATFVPVSLSKETSWFSN 535 LP PYL+ +F+ GA+FA G+T L + + G F P L + S F Sbjct: 85 FNLPYLSPYLSS-LGSNFKHGADFATAGSTIKLPTTIIPAHG--GFSPFYLDVQYSQFRQ 141 Query: 536 -------VXXXXXXXXXXXXTNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIV 694 + Y +IG ND F N T E + VPD+V Sbjct: 142 FIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEG-FLNLTVEEVNATVPDLV 200 Query: 695 AVTRSALTAVIDAGARTVLVTGMIPLGCEPELLALFPGDAHGESGCITGFNEVAQLHNRA 874 + + + D GART + P+GC +L FP +GC +NEVAQ N Sbjct: 201 NSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFPWAEKDSAGCAKAYNEVAQHFNHK 260 Query: 875 LNRMLRELRRTHPGTTLFYADIYRPIANLVASPSKYGFGDRPLAAFCSGGAGPYHFDMAA 1054 L ++ +LR+ P T + DIY +L + P K+GF + PL C G G Y+F + A Sbjct: 261 LKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGF-EFPLIT-CCGYGGKYNFSVTA 318 Query: 1055 FCGTPDSTESSD-----------PAEFLSWDGIHFTDAANRFIAQSLLRGLYN 1180 CG D+ + D P+ ++WDG H+T+AAN + + G ++ Sbjct: 319 PCG--DTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFS 369
>Q9FXE5:FUCO3_ARATH Alpha-L-fucosidase 3 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 152 bits (385), Expect = 2e-36 Identities = 108/353 (30%), Positives = 159/353 (45%), Gaps = 20/353 (5%) Frame = +2 Query: 185 YSRVFSFGDSLTDTGNAAILPATAGGPFSHAPYGETYFHHPSGRASDGRLIIDFIVESLG 364 + +F+FGDS +DTG + AG P+G ++F P+GR DGRL+IDFI ESLG Sbjct: 28 FPAIFNFGDSNSDTGGLSAAFGQAG-----PPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82 Query: 365 LPQPPPYLAGETADDFRRGANFAVGGA--TALDPAFLKSRGIATFVPVSLSKETSWFSN- 535 LP +L +F GANFA G+ AL+ +S F P SL + F N Sbjct: 83 LPYLSAFL-DSVGSNFSHGANFATAGSPIRALNSTLRQS----GFSPFSLDVQFVQFYNF 137 Query: 536 ------VXXXXXXXXXXXXTNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIVA 697 V + S Y +IG ND F+N+T E + VP+I++ Sbjct: 138 HNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIIS 197 Query: 698 VTRSALTAVIDAGARTVLVTGMIPLGCEPELLALFPGDA--HGESGCITGFNEVAQLHNR 871 +A+ + G R + P+GC ++ FP A GC++ N +AQ N Sbjct: 198 QFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNH 257 Query: 872 ALNRMLRELRRTHPGTTLFYADIYRPIANLVASPSKYGFGDRPLAAFCSGGAGPYHFDMA 1051 AL + + ELR + + Y D+Y L +GF + C G G Y+++ Sbjct: 258 ALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGF--KGSLVSCCGHGGKYNYNKG 315 Query: 1052 AFCGTPDSTES---------SDPAEFLSWDGIHFTDAANRFIAQSLLRGLYNA 1183 CG + +P + + WDG+HFT AAN+FI + GL A Sbjct: 316 IGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKIAPGLSKA 368
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 93.2 bits (230), Expect = 2e-18 Identities = 91/341 (26%), Positives = 138/341 (40%), Gaps = 16/341 (4%) Frame = +2 Query: 194 VFSFGDSLTDTGNAAILPATAGGPFSHAPYGETY-FHHPSGRASDGRLIIDFIVESLGLP 370 VF FGDS+ DTGN L ++ PYG + +GR S+GR+ D+I + LG+ Sbjct: 126 VFFFGDSIFDTGNNNNLDTKL--KCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183 Query: 371 QPPPYLAGETAD--------DFRRGANFAVGGATALDPAFLKSRGIATFVPVSLSKETSW 526 + P + D G +FA GGA L P +S + T + + ++ Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYL-PQTSESWKVTTMLD-----QLTY 237 Query: 527 FSNVXXXXXXXXXXXXTNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIVAVTR 706 F + T + S G ND I+ F N L + + Sbjct: 238 FQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMAD 297 Query: 707 SALTAVIDA---GARTVLVTGMIPLGCEPELLALFPGDAHGESGCITGFNEVAQLHNRAL 877 SA + V+ GAR + V G P+GC P + C N AQL N L Sbjct: 298 SAASFVLQLYGYGARRIGVIGTPPIGCTPSQRV------KKKKICNEDLNYAAQLFNSKL 351 Query: 878 NRMLRELRRTHPGTTLFYADIYRPIANLVASPSKYGFGD--RPLA--AFCSGGAGPYHFD 1045 +L +L +T P +T+ Y DIY + ++ SP YGF + +P GG Sbjct: 352 VIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGG------- 404 Query: 1046 MAAFCGTPDSTESSDPAEFLSWDGIHFTDAANRFIAQSLLR 1168 FC S+ + +L WDG+H + A + L++ Sbjct: 405 --VFCKERTLKNMSNASSYLFWDGLHPSQRAYEISNRKLVK 443
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 90.1 bits (222), Expect = 2e-17 Identities = 92/339 (27%), Positives = 142/339 (41%), Gaps = 14/339 (4%) Frame = +2 Query: 194 VFSFGDSLTDTGNAAILPATAGGPFSHAPYGETY-FHHPSGRASDGRLIIDFIVESLGLP 370 VF FGDS+ DTGN L ++ PYG + F +GR S+G + D++ + +G+ Sbjct: 205 VFFFGDSVFDTGNNNNLETKIKS--NYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262 Query: 371 Q-PPPYLAGETA-DDFRRGANFAVGGATALDPAFLKSRGIATFVPV--SLSKETSWFSNV 538 + P YL + +D G +FA GGA +P ++ A +P+ L+ + V Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGGA-GYNPTTSEA---ANAIPMLDQLTYFQDYIEKV 318 Query: 539 XXXXXXXXXXXX------TNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIVAV 700 TN + S G ND I F + L + + Sbjct: 319 NRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTII 378 Query: 701 TRSALTAVIDA---GARTVLVTGMIPLGCEPELLALFPGDAHGESGCITGFNEVAQLHNR 871 SA + V+ GAR + V G PLGC P + C N +QL N Sbjct: 379 ADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRL------KKKKICNEELNYASQLFNS 432 Query: 872 ALNRMLRELRRTHPGTTLFYADIYRPIANLVASPSKYGFGDRPLAAFCSGGAGPYHFDMA 1051 L +L +L +T P +T Y DIY I+ ++ +P+ YGF + C G Sbjct: 433 KLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGF-EETKKPCCKTGL----LSAG 487 Query: 1052 AFCGTPDSTESSDPAEFLSWDGIHFTDAANRFIAQSLLR 1168 A C S + + +L WDG+H T A + I + L++ Sbjct: 488 ALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTINKVLIK 526
>P40601:LIP1_PHOLU Lipase 1 precursor - Photorhabdus luminescens (Xenorhabdus| luminescens) Length = 645 Score = 40.4 bits (93), Expect = 0.017 Identities = 83/399 (20%), Positives = 142/399 (35%), Gaps = 52/399 (13%) Frame = +2 Query: 176 ASRYSRVFSFGDSLTDTGNAAILPATAGGPFSHAPYGETYFHHPSGRASDGRLIIDFIVE 355 A Y+ ++ FGDSL+D GN G ++ T + +L DFI + Sbjct: 22 AHAYNNLYVFGDSLSDGGN--------NGRYTVDGINGT----------ESKLYNDFIAQ 63 Query: 356 SLGLPQPPPYLAGETADDFRRGANFAVGGATALDPAFLKSRGIATFVPVSLSKETSWFSN 535 LG+ E + + G N+A GGATA+ L+ + + Sbjct: 64 QLGI---------ELVNSKKGGTNYAAGGATAV---------------ADLNNKHNTQDQ 99 Query: 536 VXXXXXXXXXXXXTNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIVAVTRSAL 715 V N M Y IG ND AL R A ++ + S + Sbjct: 100 VMGYLASHSNRADHNGM-----YVHWIGGNDVDAAL---RNPADAQKIITESAMAASSQV 151 Query: 716 TAVIDAGARTVLVTGMIPLGCEPELL--ALFPGDA------------------------- 814 A+++AGA V+V + +G P+++ L G A Sbjct: 152 HALLNAGAGLVIVPTVPDVGMTPKIMEFVLSKGGATSKDLAKIHAVVNGYPTIDKDTRLQ 211 Query: 815 --HG--------------------ESGCITGFNEVAQLHNRALN--RMLRELRRTHPGTT 922 HG I G+NE++ ++ ++ L ++ + Sbjct: 212 VIHGVFKQIGSDVSGGDAKKAEETTKQLIDGYNELSSNASKLVDNYNQLEDMALSQENGN 271 Query: 923 LFYADIYRPIANLVASPSKYGFGDRPLAAFCSGGAGPYHFDMAAFCGTPDS-TESSDPAE 1099 + D+ + ++A+P +YGF + + C+ G A C + D+ ++S P Sbjct: 272 IVRVDVNALLHEVIANPLRYGFLN-TIGYACAQGVN------AGSCRSKDTGFDASKP-- 322 Query: 1100 FLSWDGIHFTDAANRFIAQSLLRGLYNASAMAEPQTALL 1216 FL D H T A+ ++Q Y S + P +L Sbjct: 323 FLFADDFHPTPEAHHIVSQ------YTVSVLNAPYRVML 355
>Q5UXB9:GPMI_HALMA 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -| Haloarcula marismortui (Halobacterium marismortui) Length = 519 Score = 31.6 bits (70), Expect = 8.0 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = -2 Query: 898 ELAEHAVERAVVQLGDLVEASDAAGLAVRVAGEEGEQLRLATERD-HPRHEHRPCSGVDH 722 + A AVE QLG LVE AAG + + G + TE D H H P + Sbjct: 417 DAAVTAVEAVDEQLGRLVETIGAAGGHALICADHGNADDMGTEDDPHTAHTTNPVPFIYL 476 Query: 721 GGEGRAG 701 +G AG Sbjct: 477 SPDGTAG 483
>Q9YUS2:DPOL_TUHV2 DNA polymerase - Tupaiid herpesvirus (strain 2) (TuHV-2) (Herpesvirus| tupaia (strain 2)) Length = 1171 Score = 31.6 bits (70), Expect = 8.0 Identities = 24/84 (28%), Positives = 33/84 (39%) Frame = +2 Query: 788 LLALFPGDAHGESGCITGFNEVAQLHNRALNRMLRELRRTHPGTTLFYADIYRPIANLVA 967 +L LF A G S C+ F + A + R + R TL A ++ V Sbjct: 144 VLRLFGRTADGASLCVNVFGQDAYFYCRYGDAQSLHDRLYRLSDTLELAPVFHVRVRRVQ 203 Query: 968 SPSKYGFGDRPLAAFCSGGAGPYH 1039 S YG+G RP A G +H Sbjct: 204 RCSIYGYGTRPFADLYLVACGNWH 227
>Q9YUS3:DPOL_TUHV1 DNA polymerase - Tupaiid herpesvirus 1 (strain 1) (TuHV-1)| (Herpesvirus tupaia (strain 1)) Length = 1171 Score = 31.6 bits (70), Expect = 8.0 Identities = 24/84 (28%), Positives = 33/84 (39%) Frame = +2 Query: 788 LLALFPGDAHGESGCITGFNEVAQLHNRALNRMLRELRRTHPGTTLFYADIYRPIANLVA 967 +L LF A G S C+ F + A + R + R TL A ++ V Sbjct: 144 VLRLFGRTADGASLCVNVFGQDAYFYCRYGDAQSLHDRLYRLSDTLELAPVFHVRVRRVQ 203 Query: 968 SPSKYGFGDRPLAAFCSGGAGPYH 1039 S YG+G RP A G +H Sbjct: 204 RCSIYGYGTRPFADLYLVACGNWH 227
>Q91ZK4:DMBX1_MOUSE Diencephalon/mesencephalon homeobox protein 1 - Mus musculus| (Mouse) Length = 381 Score = 31.6 bits (70), Expect = 8.0 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Frame = -3 Query: 507 RETGTNVAIPLLFKNAGSSAVAPPTAKFAPRRKSS---AVSPAR*GGGCGNPS---DSTM 346 RE + P K+ GS + P + +P+ S A++PA GGG PS S+ Sbjct: 199 REEDSRAEEPKAEKSPGSESKVPGCKRGSPKADSPGSLAITPAAPGGGLLGPSHSYSSSP 258 Query: 345 KSMMRRPSDARP-LGWWKYVSPYGAWEKGPPAVAGRMAA 232 S+ R R + + Y ++E G PA A AA Sbjct: 259 LSLFRLQEQFRQHMAATNNLMHYSSFEVGGPAPAAAAAA 297
>Q7SG38:ATG22_NEUCR Autophagy-related protein 22 - Neurospora crassa| Length = 737 Score = 31.6 bits (70), Expect = 8.0 Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 6/181 (3%) Frame = +2 Query: 188 SRVFSFGDSLTDTGNAAILPATAGGPFSHAPYGETYFHHPSGRASDGRLIIDFIVESLGL 367 S SF D +T T + + PA AG PYG+ +DG S GL Sbjct: 99 SDTLSFADWITTTMSGRMSPANAGDNSDSYPYGDD---------TDGD-------SSSGL 142 Query: 368 PQPPPYLAGETADDFRRGANFAVGG--ATALDPAFLKSRGIATFVPV---SLSKETS-WF 529 P PP Y DD R + + G A A GI +F+P+ SL++E Sbjct: 143 P-PPRY----PGDDTRPTSQKELAGWYAYAFAAEVYVICGIGSFIPILLESLARENGVLL 197 Query: 530 SNVXXXXXXXXXXXXTNIMASSVFYFGEIGVNDYIFALFSNRTAELAASLVPDIVAVTRS 709 S+ T+ V Y + +N FA+++ + L +L+ +V+++ + Sbjct: 198 SDRSKPCGSSSDKHTTSAEGQCVVYVLGMEINTASFAMYTFSVSVLLQALL--VVSISCA 255 Query: 710 A 712 A Sbjct: 256 A 256 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 189,146,015 Number of extensions: 4031576 Number of successful extensions: 13093 Number of sequences better than 10.0: 10 Number of HSP's gapped: 13069 Number of HSP's successfully gapped: 11 Length of query: 454 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 337 Effective length of database: 68,593,924 Effective search space: 23116152388 Effective search space used: 23116152388 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
