ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf163c06 |
|---|---|
| Clone Library Name | barley_pub |
>Q9SJ20:RIR1_ARATH Ribonucleoside-diphosphate reductase large subunit - Arabidopsis| thaliana (Mouse-ear cress) Length = 816 Score = 144 bits (364), Expect(2) = 3e-42 Identities = 62/78 (79%), Positives = 71/78 (91%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GAFAVYLEPWHAD++EFL+LRKNHGKEE+RARDLF+ALW+P LFM+RVQNN WSL Sbjct: 291 GKRKGAFAVYLEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSL 350 Query: 1773 FCPNEALGLADCWGGKFE 1826 FCPNEA GLADCWG +FE Sbjct: 351 FCPNEAPGLADCWGAEFE 368 Score = 50.1 bits (118), Expect(2) = 3e-42 Identities = 20/32 (62%), Positives = 27/32 (84%) Frame = +1 Query: 1849 KQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 ++ K KKV+ AQ LW++IL SQ+ETGTPYML+ Sbjct: 376 REGKAKKVVQAQQLWYEILTSQVETGTPYMLF 407
>P79732:RIR1_DANRE Ribonucleoside-diphosphate reductase large subunit - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 794 Score = 124 bits (311), Expect(2) = 6e-35 Identities = 52/74 (70%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWH DIF+FL+L+KN GKEE RARDLF+ALW+P LFM+RV+ N DWSL CPN Sbjct: 295 GAFAMYLEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPN 354 Query: 1785 EALGLADCWGGKFE 1826 + GL +CWG +FE Sbjct: 355 DCPGLDECWGEEFE 368 Score = 45.8 bits (107), Expect(2) = 6e-35 Identities = 18/32 (56%), Positives = 26/32 (81%) Frame = +1 Query: 1849 KQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 ++ + K+V+ AQ LW+ I++SQ ETGTPYMLY Sbjct: 376 QEGRAKRVVKAQQLWYAIIESQTETGTPYMLY 407
>Q9UW15:RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain - Neurospora crassa| Length = 929 Score = 125 bits (313), Expect(2) = 3e-34 Identities = 54/74 (72%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+P LFM+RV+ N W+L CP+ Sbjct: 295 GAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPH 354 Query: 1785 EALGLADCWGGKFE 1826 E GLAD +G +FE Sbjct: 355 ECPGLADVYGDEFE 368 Score = 42.7 bits (99), Expect(2) = 3e-34 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 Query: 1849 KQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 K+ K +K + AQ LW+ IL++Q ETG P+MLY Sbjct: 376 KEGKGRKTVKAQKLWYAILEAQTETGNPFMLY 407
>P36602:RIR1_SCHPO Ribonucleoside-diphosphate reductase large chain -| Schizosaccharomyces pombe (Fission yeast) Length = 811 Score = 122 bits (306), Expect(2) = 2e-33 Identities = 50/73 (68%), Positives = 61/73 (83%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA YLEPWHAD+ +FL+LRK HG E+ RAR++F+ALW+P LFMQRV+ NE W+ FCPN Sbjct: 295 GAFAAYLEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFCPN 354 Query: 1785 EALGLADCWGGKF 1823 EA GLAD WG +F Sbjct: 355 EAPGLADVWGDEF 367 Score = 43.1 bits (100), Expect(2) = 2e-33 Identities = 16/32 (50%), Positives = 26/32 (81%) Frame = +1 Query: 1849 KQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 K+ + ++ +PAQ +W+ IL+SQ+ETG P+MLY Sbjct: 376 KENRGRRSLPAQKVWYAILQSQVETGNPFMLY 407
>P21524:RIR1_YEAST Ribonucleoside-diphosphate reductase large chain 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 888 Score = 120 bits (301), Expect(2) = 1e-31 Identities = 52/74 (70%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWHADIF+F+D+RKNHGKEE RARDLF ALW+P LFM+RV+ N W+LF P Sbjct: 295 GAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPT 354 Query: 1785 EALGLADCWGGKFE 1826 A GL+DC+G +FE Sbjct: 355 SAPGLSDCYGDEFE 368 Score = 38.5 bits (88), Expect(2) = 1e-31 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K I AQ LW+ IL++Q ETGTP+++Y Sbjct: 381 KTIKAQKLWYSILEAQTETGTPFVVY 406
>Q03604:RIR1_CAEEL Ribonucleoside-diphosphate reductase large subunit - Caenorhabditis| elegans Length = 788 Score = 121 bits (304), Expect(2) = 1e-30 Identities = 52/74 (70%), Positives = 61/74 (82%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWHADIFEF+ LRKN G EE RARDLF ALW+P LFM+RV+ +++WSL CP Sbjct: 301 GAFAIYLEPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMCPC 360 Query: 1785 EALGLADCWGGKFE 1826 E GL DCWG +FE Sbjct: 361 ECPGLDDCWGEEFE 374 Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +1 Query: 1852 QAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 + + +K + A+ LW I+ +QIETG PY+ Y Sbjct: 383 EGRVRKTVKARKLWEHIVSNQIETGLPYITY 413
>Q8SR37:RIR1_ENCCU Ribonucleoside-diphosphate reductase large chain - Encephalitozoon| cuniculi Length = 768 Score = 114 bits (285), Expect(2) = 1e-30 Identities = 47/73 (64%), Positives = 63/73 (86%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 G+ A++LEPWH +IF+FL+LRKN G EE RARD+F ALW+ LFM+RV+NNE+WSLFCP+ Sbjct: 289 GSIAIFLEPWHMEIFDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPS 348 Query: 1785 EALGLADCWGGKF 1823 +A+GL+D WG +F Sbjct: 349 QAVGLSDVWGEEF 361 Score = 41.6 bits (96), Expect(2) = 1e-30 Identities = 17/27 (62%), Positives = 22/27 (81%) Frame = +1 Query: 1864 KKVIPAQTLWFDILKSQIETGTPYMLY 1944 + V+PAQ LW I+++QIETGTPYM Y Sbjct: 374 RTVVPAQKLWKAIIEAQIETGTPYMCY 400
>P21672:RIR3_YEAST Ribonucleoside-diphosphate reductase large chain 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 869 Score = 114 bits (284), Expect(2) = 7e-30 Identities = 50/74 (67%), Positives = 61/74 (82%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA++LEPWHADIF+F+D+RK HGKEE RARDLF ALW+P LFM+RVQ + W+LF P+ Sbjct: 295 GAFALFLEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPS 354 Query: 1785 EALGLADCWGGKFE 1826 A GL D WG +FE Sbjct: 355 AAPGLDDVWGDEFE 368 Score = 39.3 bits (90), Expect(2) = 7e-30 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K I AQ LW+ IL++Q ETGTP+M+Y Sbjct: 381 KTIKAQKLWYAILQAQTETGTPFMVY 406
>Q5R919:RIR1_PONPY Ribonucleoside-diphosphate reductase large subunit - Pongo pygmaeus| (Orangutan) Length = 792 Score = 128 bits (321), Expect = 1e-28 Identities = 55/74 (74%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLFFALW+P LFM+RV+ N+DWSL CPN Sbjct: 295 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDEVWGEEFE 368 Score = 49.7 bits (117), Expect = 5e-05 Identities = 25/68 (36%), Positives = 38/68 (55%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 +++ +M C L ++WG + KQ + +KV+ AQ LW+ I++SQ E Sbjct: 346 QDWSLMCPNECPGLDEVWG------EEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTE 399 Query: 1921 TGTPYMLY 1944 TGTPYMLY Sbjct: 400 TGTPYMLY 407
>P50648:RIR1_PLAF4 Ribonucleoside-diphosphate reductase large chain - Plasmodium| falciparum (isolate Dd2) Length = 806 Score = 128 bits (321), Expect = 1e-28 Identities = 54/78 (69%), Positives = 68/78 (87%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +G+FAVY+EPWH+DIFEFLDLRKNHGKEE RARDLF+A+WVP LFM+RV+ N++W+L Sbjct: 289 GKRKGSFAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTL 348 Query: 1773 FCPNEALGLADCWGGKFE 1826 CPNE GL++ WG +FE Sbjct: 349 MCPNECPGLSETWGEEFE 366 Score = 45.8 bits (107), Expect = 7e-04 Identities = 26/68 (38%), Positives = 33/68 (48%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 K + +M C L + WG ++ KK + AQ LWF IL+SQIE Sbjct: 344 KNWTLMCPNECPGLSETWG------EEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIE 397 Query: 1921 TGTPYMLY 1944 TG PYMLY Sbjct: 398 TGVPYMLY 405
>P07742:RIR1_MOUSE Ribonucleoside-diphosphate reductase large subunit - Mus musculus| (Mouse) Length = 792 Score = 128 bits (321), Expect = 1e-28 Identities = 55/74 (74%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLFFALW+P LFM+RV+ N+DWSL CPN Sbjct: 295 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDEVWGEEFE 368 Score = 50.1 bits (118), Expect = 4e-05 Identities = 25/68 (36%), Positives = 38/68 (55%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 +++ +M C L ++WG + KQ + +KV+ AQ LW+ I++SQ E Sbjct: 346 QDWSLMCPNECPGLDEVWG------EEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTE 399 Query: 1921 TGTPYMLY 1944 TGTPYMLY Sbjct: 400 TGTPYMLY 407
>P23921:RIR1_HUMAN Ribonucleoside-diphosphate reductase large subunit - Homo sapiens| (Human) Length = 792 Score = 128 bits (321), Expect = 1e-28 Identities = 55/74 (74%), Positives = 63/74 (85%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLFFALW+P LFM+RV+ N+DWSL CPN Sbjct: 295 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDEVWGEEFE 368 Score = 49.7 bits (117), Expect = 5e-05 Identities = 25/68 (36%), Positives = 38/68 (55%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 +++ +M C L ++WG + KQ + +KV+ AQ LW+ I++SQ E Sbjct: 346 QDWSLMCPNECPGLDEVWG------EEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTE 399 Query: 1921 TGTPYMLY 1944 TGTPYMLY Sbjct: 400 TGTPYMLY 407
>O15909:RIR1_TRYBB Ribonucleoside-diphosphate reductase large chain - Trypanosoma brucei| brucei Length = 838 Score = 107 bits (266), Expect(2) = 2e-28 Identities = 47/77 (61%), Positives = 61/77 (79%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GAFA+YLEPWHADIF FL L+KN GKE+ RARDLF+ LW+P LFM+RV+++ W+L Sbjct: 301 GKRKGAFAIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTL 360 Query: 1773 FCPNEALGLADCWGGKF 1823 PN A L+DC+G +F Sbjct: 361 MDPNTAPFLSDCYGQEF 377 Score = 41.2 bits (95), Expect(2) = 2e-28 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = +1 Query: 1849 KQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 ++ + + I AQ LWF IL+SQ+ETG P+MLY Sbjct: 386 REGRGVRTIQAQELWFLILESQVETGVPFMLY 417
>P50647:RIR1_PLAFG Ribonucleoside-diphosphate reductase large chain - Plasmodium| falciparum (isolate FCR-3 / Gambia) Length = 804 Score = 127 bits (318), Expect = 3e-28 Identities = 53/78 (67%), Positives = 68/78 (87%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +G++AVY+EPWH+DIFEFLDLRKNHGKEE RARDLF+A+WVP LFM+RV+ N++W+L Sbjct: 290 GKRKGSYAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTL 349 Query: 1773 FCPNEALGLADCWGGKFE 1826 CPNE GL++ WG +FE Sbjct: 350 MCPNECPGLSETWGEEFE 367 Score = 40.8 bits (94), Expect = 0.024 Identities = 26/81 (32%), Positives = 36/81 (44%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 K + +M C L + WG ++ KK + AQ LWF IL+SQIE Sbjct: 345 KNWTLMCPNECPGLSETWG------EEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIE 398 Query: 1921 TGTPYMLYLIVMGSRLLKAWG 1983 TG P LY ++ +K G Sbjct: 399 TGVPIYLYKDSCNAKPIKNLG 419
>P48591:RIR1_DROME Ribonucleoside-diphosphate reductase large subunit - Drosophila| melanogaster (Fruit fly) Length = 812 Score = 125 bits (313), Expect = 1e-27 Identities = 53/78 (67%), Positives = 65/78 (83%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GAFA+YLEPWH+D+FEFL+L+KN GKEENRARDLF+ALW+P LFM+RV+ N DWSL Sbjct: 302 GKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSL 361 Query: 1773 FCPNEALGLADCWGGKFE 1826 CP++ GL D WG +FE Sbjct: 362 MCPHKCPGLHDVWGDEFE 379 Score = 41.6 bits (96), Expect = 0.014 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = +1 Query: 1744 EYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIET 1923 ++ +M C L +WG ++ + + + AQ+LWF I+++Q+ET Sbjct: 358 DWSLMCPHKCPGLHDVWG------DEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVET 411 Query: 1924 GTPYMLY 1944 G PYML+ Sbjct: 412 GNPYMLF 418
>O61065:RIR1_CRYPV Ribonucleoside-diphosphate reductase large chain - Cryptosporidium| parvum Length = 803 Score = 116 bits (291), Expect = 3e-25 Identities = 48/78 (61%), Positives = 61/78 (78%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA A+YLEPWH D+ EF+++RKNHGKEE R RDLF ALWVP LFM+RV+ ++DW+L Sbjct: 289 GKRKGAIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTL 348 Query: 1773 FCPNEALGLADCWGGKFE 1826 CP+E GL D WG F+ Sbjct: 349 MCPDECRGLQDVWGDDFK 366 Score = 45.4 bits (106), Expect = 0.001 Identities = 23/68 (33%), Positives = 36/68 (52%) Frame = +1 Query: 1741 KEYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIE 1920 +++ +M C L +WG + KQ + +K + AQ LWF IL++QIE Sbjct: 344 QDWTLMCPDECRGLQDVWG------DDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIE 397 Query: 1921 TGTPYMLY 1944 TGTP++ Y Sbjct: 398 TGTPFICY 405
>P12848:RIR1_VACCV Ribonucleoside-diphosphate reductase large chain - Vaccinia virus| (strain Western Reserve / WR) (VACV) Length = 771 Score = 108 bits (269), Expect = 1e-22 Identities = 45/74 (60%), Positives = 58/74 (78%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 G A+YLEPWH+DI FLDL+KN G EE+R RDLF ALW+P LFM+RV+++ +WSL CP+ Sbjct: 295 GVMAIYLEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPD 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDNVWGDEFE 368 Score = 39.7 bits (91), Expect = 0.053 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 1744 EYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIET 1923 E+ +M C L +WG + +L ++ + K +I A+ +W I++SQIET Sbjct: 347 EWSLMCPDECPGLDNVWGDEFERLYTL------YERERRYKSIIKARVVWKAIIESQIET 400 Query: 1924 GTPYMLY 1944 GTP++LY Sbjct: 401 GTPFILY 407
>P20503:RIR1_VACCC Ribonucleoside-diphosphate reductase large chain - Vaccinia virus| (strain Copenhagen) (VACV) Length = 771 Score = 108 bits (269), Expect = 1e-22 Identities = 45/74 (60%), Positives = 58/74 (78%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 G A+YLEPWH+DI FLDL+KN G EE+R RDLF ALW+P LFM+RV+++ +WSL CP+ Sbjct: 295 GVMAIYLEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPD 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDNVWGDEFE 368 Score = 39.7 bits (91), Expect = 0.053 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 1744 EYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIET 1923 E+ +M C L +WG + +L ++ + K +I A+ +W I++SQIET Sbjct: 347 EWSLMCPDECPGLDNVWGDEFERLYTL------YERERRYKSIIKARVVWKAIIESQIET 400 Query: 1924 GTPYMLY 1944 GTP++LY Sbjct: 401 GTPFILY 407
>Q76RD8:RIR1_VACCA Ribonucleoside-diphosphate reductase large chain - Vaccinia virus| (strain Ankara) (VACV) Length = 771 Score = 108 bits (269), Expect = 1e-22 Identities = 45/74 (60%), Positives = 58/74 (78%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 G A+YLEPWH+DI FLDL+KN G EE+R RDLF ALW+P LFM+RV+++ +WSL CP+ Sbjct: 295 GVMAIYLEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPD 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDNVWGDEFE 368 Score = 39.7 bits (91), Expect = 0.053 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 1744 EYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIET 1923 E+ +M C L +WG + +L ++ + K +I A+ +W I++SQIET Sbjct: 347 EWSLMCPDECPGLDNVWGDEFERLYTL------YERERRYKSIIKARVVWKAIIESQIET 400 Query: 1924 GTPYMLY 1944 GTP++LY Sbjct: 401 GTPFILY 407
>P32984:RIR1_VARV Ribonucleoside-diphosphate reductase large chain - Variola virus| Length = 771 Score = 106 bits (265), Expect = 4e-22 Identities = 44/74 (59%), Positives = 57/74 (77%) Frame = +3 Query: 1605 GAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSLFCPN 1784 G +YLEPWH+DI FLDL+KN G EE+R RDLF ALW+P LFM+RV+++ +WSL CP+ Sbjct: 295 GVMTIYLEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPD 354 Query: 1785 EALGLADCWGGKFE 1826 E GL + WG +FE Sbjct: 355 ECPGLDNVWGDEFE 368 Score = 39.7 bits (91), Expect = 0.053 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 1744 EYKIMRIGPCFVLMKLWGWLIVGVGSLRNCTRNMRKQAKQKKVIPAQTLWFDILKSQIET 1923 E+ +M C L +WG + +L ++ + K +I A+ +W I++SQIET Sbjct: 347 EWSLMCPDECPGLDNVWGDEFERLYTL------YEREKRYKSIIKARVVWKAIIESQIET 400 Query: 1924 GTPYMLY 1944 GTP++LY Sbjct: 401 GTPFILY 407
>Q7T6Y8:RIR1_MIMIV Ribonucleoside-diphosphate reductase large chain - Mimivirus| Length = 881 Score = 88.2 bits (217), Expect(2) = 4e-21 Identities = 38/77 (49%), Positives = 53/77 (68%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G G+FA+++EPWH DIF FLDL+KN G E RARDLF L + +FM+RV ++ WSL Sbjct: 357 GKRPGSFAIFIEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSL 416 Query: 1773 FCPNEALGLADCWGGKF 1823 CP++ L + +G +F Sbjct: 417 MCPSQCPNLLNKYGDEF 433 Score = 35.8 bits (81), Expect(2) = 4e-21 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K I A LWF I++SQIETG PY+++ Sbjct: 448 KQIRAIDLWFKIMESQIETGVPYVMF 473
>Q9ZLF9:RIR1_HELPJ Ribonucleoside-diphosphate reductase alpha subunit - Helicobacter| pylori J99 (Campylobacter pylori J99) Length = 788 Score = 89.7 bits (221), Expect(2) = 2e-18 Identities = 44/82 (53%), Positives = 53/82 (64%) Frame = +3 Query: 1581 MDCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNE 1760 +D G +GA AVYLE WH D+ EF+DLRKN G E RA DLF ALWV LFM+RV + Sbjct: 283 VDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDA 342 Query: 1761 DWSLFCPNEALGLADCWGGKFE 1826 W+LF P E L + +G FE Sbjct: 343 MWTLFDPYECKDLTELYGQDFE 364 Score = 25.0 bits (53), Expect(2) = 2e-18 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 1864 KKVIPAQTLWFDILKSQIETGTPYMLY 1944 K+ I A+ LW IL + E G P++ + Sbjct: 378 KEYINAKDLWKKILMNYFEAGLPFLAF 404
>P55982:RIR1_HELPY Ribonucleoside-diphosphate reductase alpha subunit - Helicobacter| pylori (Campylobacter pylori) Length = 788 Score = 88.6 bits (218), Expect(2) = 4e-18 Identities = 43/82 (52%), Positives = 53/82 (64%) Frame = +3 Query: 1581 MDCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNE 1760 +D G +GA AVYLE WH D+ EF+DLRKN G E RA DLF ALWV LF++RV + Sbjct: 283 VDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFLKRVLEDA 342 Query: 1761 DWSLFCPNEALGLADCWGGKFE 1826 W+LF P E L + +G FE Sbjct: 343 MWTLFDPYECKDLTELYGQDFE 364 Score = 25.0 bits (53), Expect(2) = 4e-18 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 1864 KKVIPAQTLWFDILKSQIETGTPYMLY 1944 K+ I A+ LW IL + E G P++ + Sbjct: 378 KEYINAKDLWKKILMNYFEAGLPFLAF 404
>O84834:RIR1_CHLTR Ribonucleoside-diphosphate reductase alpha subunit - Chlamydia| trachomatis Length = 1047 Score = 84.3 bits (207), Expect(2) = 8e-17 Identities = 38/78 (48%), Positives = 50/78 (64%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA VYLE WH D +FL+LRKN G E RA D+ A W+P LF +R+Q W+L Sbjct: 529 GKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDLFFKRLQQKGTWTL 588 Query: 1773 FCPNEALGLADCWGGKFE 1826 F P++ GL D +G +FE Sbjct: 589 FSPDDVPGLHDAYGEEFE 606 Score = 25.0 bits (53), Expect(2) = 8e-17 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K + A+ LW +L ETG P+M + Sbjct: 625 KKVEAEDLWRKMLSMLFETGHPWMTF 650
>Q9PL93:RIR1_CHLMU Ribonucleoside-diphosphate reductase alpha subunit - Chlamydia| muridarum Length = 1047 Score = 82.8 bits (203), Expect(2) = 2e-16 Identities = 37/78 (47%), Positives = 50/78 (64%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA VYLE WH D +FL+LRKN G + RA D+ A W+P LF +R+Q W+L Sbjct: 529 GKRKGAVCVYLEVWHLDYEDFLELRKNTGDDRRRAHDVNTASWIPDLFFKRLQQKGSWTL 588 Query: 1773 FCPNEALGLADCWGGKFE 1826 F P++ GL D +G +FE Sbjct: 589 FSPDDVPGLHDAYGEEFE 606 Score = 25.0 bits (53), Expect(2) = 2e-16 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K + A+ LW +L ETG P+M + Sbjct: 625 KKVEAEDLWRKMLSMLFETGHPWMTF 650
>Q9Z6S5:RIR1_CHLPN Ribonucleoside-diphosphate reductase alpha subunit - Chlamydia| pneumoniae (Chlamydophila pneumoniae) Length = 1044 Score = 78.6 bits (192), Expect(2) = 1e-14 Identities = 35/78 (44%), Positives = 49/78 (62%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA VYLE WH D +FL+LRKN G E R D+ A W+P LF +R++ W+L Sbjct: 527 GKRKGAMCVYLENWHLDYEDFLELRKNTGDERRRTHDINTASWIPDLFFKRLEKKGMWTL 586 Query: 1773 FCPNEALGLADCWGGKFE 1826 F P++ GL + +G +FE Sbjct: 587 FSPDDVPGLHEAYGLEFE 604 Score = 23.5 bits (49), Expect(2) = 1e-14 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 K + A+ LW +L ETG P++ + Sbjct: 623 KKVEAEVLWRKMLSMLYETGHPWITF 648
>O83972:RIR1_TREPA Ribonucleoside-diphosphate reductase alpha subunit - Treponema| pallidum Length = 845 Score = 66.6 bits (161), Expect(2) = 6e-13 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Frame = +3 Query: 1581 MDCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNN- 1757 +D G +G+ AVYL+ WH DI EFL LR N+G + +A D+F A+ P LF + V++N Sbjct: 386 VDQLGVRQGSVAVYLDVWHKDIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLFWKTVRDNL 445 Query: 1758 -EDWSLFCPNEAL 1793 W L CP+E L Sbjct: 446 GASWYLMCPHEIL 458 Score = 29.6 bits (65), Expect(2) = 6e-13 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 1864 KKVIPAQTLWFDILKSQIETGTPYMLY 1944 K+ IP + L +LKS +ETGTP+ Y Sbjct: 488 KRTIPIKELVRLVLKSVVETGTPFAFY 514
>P74240:RIR1_SYNY3 Ribonucleoside-diphosphate reductase alpha subunit - Synechocystis| sp. (strain PCC 6803) Length = 767 Score = 66.6 bits (161), Expect = 4e-10 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA V L+ WH D+ EFL+++ +G + +A D+F L +P FM+RV N EDW+L Sbjct: 315 GRRAGAVTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDEFMRRVINKEDWTL 374 Query: 1773 FCPNE-----ALGLADCWGGKFE 1826 P E + LA+ WG +FE Sbjct: 375 VDPYEVREKMGIELAELWGEQFE 397
>O66503:RIR1_AQUAE Ribonucleoside-diphosphate reductase alpha subunit - Aquifex aeolicus| Length = 801 Score = 63.9 bits (154), Expect = 3e-09 Identities = 27/67 (40%), Positives = 45/67 (67%) Frame = +3 Query: 1581 MDCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNE 1760 +D G +G+ ++ L+ WH DI +FL+++ N G E +A D+ A+ +P LFM+R++N E Sbjct: 302 VDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIPDLFMKRLKNRE 361 Query: 1761 DWSLFCP 1781 DW+L P Sbjct: 362 DWTLIDP 368
>P09853:RIR1_HHV23 Ribonucleoside-diphosphate reductase large chain - Human herpesvirus| 2 (strain 333) (HHV-2) (Human herpes simplex virus 2) Length = 1144 Score = 58.2 bits (139), Expect = 1e-07 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 7/77 (9%) Frame = +3 Query: 1617 VYLEPWHADIFEFLDLRKN-HGKEENRARDLFFALWVPGLFMQRV------QNNEDWSLF 1775 VYLEPWH+D+ L ++ G+E R ++F ALW+P LF +R+ + N WSLF Sbjct: 663 VYLEPWHSDVRAVLRMKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLF 722 Query: 1776 CPNEALGLADCWGGKFE 1826 + ++ LAD G +FE Sbjct: 723 DRDTSMSLADFHGEEFE 739
>P26685:RIR1_ASFM2 Ribonucleoside-diphosphate reductase large chain - African swine| fever virus (isolate Malawi Lil 20/1) (ASFV) Length = 779 Score = 58.2 bits (139), Expect = 1e-07 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 13/96 (13%) Frame = +3 Query: 1551 ILNVLVLL*DMDC----AGAGEGAFAVYLEPWHADIFEFLDLRKNHG---KEENRARDLF 1709 I N +VL C G GA+AVYLE WH DIF FL + + G ++ A +L Sbjct: 247 IQNYIVLQNASQCYANQGGLRPGAYAVYLELWHQDIFTFLQMPRLKGQMAEQRLNAPNLK 306 Query: 1710 FALWVPGLFMQ----RVQNNED--WSLFCPNEALGL 1799 + LWVP LFM+ ++ N D W LF P++A L Sbjct: 307 YGLWVPDLFMEILEDQIHNRGDGTWYLFSPDQAPNL 342
>P42491:RIR1_ASFB7 Ribonucleoside-diphosphate reductase large chain - African swine| fever virus (strain BA71V) (ASFV) Length = 778 Score = 57.4 bits (137), Expect = 2e-07 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHG---KEENRARDLFFALWVPGLFMQ----RVQ 1751 G GA+AVYLE WH DIF FL + + G ++ A +L + LWVP LFM+ ++ Sbjct: 264 GLRPGAYAVYLELWHQDIFTFLQMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIH 323 Query: 1752 NNED--WSLFCPNEALGL 1799 N D W LF P++A L Sbjct: 324 NRGDGTWYLFSPDQAPNL 341
>P08543:RIR1_HHV11 Ribonucleoside-diphosphate reductase large chain - Human herpesvirus| 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) Length = 1137 Score = 56.6 bits (135), Expect = 4e-07 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 7/77 (9%) Frame = +3 Query: 1617 VYLEPWHADIFEFLDLRKN-HGKEENRARDLFFALWVPGLFMQRV------QNNEDWSLF 1775 VYLEPWH D+ L ++ G+E R ++F ALW+P LF +R+ + N W+LF Sbjct: 656 VYLEPWHTDVRAVLRMKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWTLF 715 Query: 1776 CPNEALGLADCWGGKFE 1826 + ++ LAD G +FE Sbjct: 716 DRDTSMSLADFHGEEFE 732
>P28846:RIR1_EHV1B Ribonucleoside-diphosphate reductase large chain - Equine herpesvirus| 1 (strain Ab4p) (EHV-1) (Equine abortion virus) Length = 790 Score = 49.3 bits (116), Expect(2) = 7e-07 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%) Frame = +3 Query: 1551 ILNVLVLL*DMDCAGAGEG----AFAVYLEPWHADIFEFLDLRKNHGKEEN-RARDLFFA 1715 ++ +L L+ M A +G VY EPWHADI L++R ++E R ++F Sbjct: 274 VMALLKLIDSMTMAINSDGERPTGVCVYFEPWHADIRAILNMRGMLARDETVRCDNIFAC 333 Query: 1716 LWVPGLFMQRVQNNED------WSLFCPNEALGLADCWGGKFE 1826 +W P LF R Q D W+LF + A L +G +FE Sbjct: 334 MWTPDLFFDRYQRYLDGESGVMWTLF-DDTASHLCHMYGKEFE 375 Score = 26.2 bits (56), Expect(2) = 7e-07 Identities = 9/24 (37%), Positives = 18/24 (75%) Frame = +1 Query: 1873 IPAQTLWFDILKSQIETGTPYMLY 1944 IP Q + F I++S + TG+P++++ Sbjct: 391 IPIQDMAFIIVRSAVMTGSPFLMF 414
>P50643:RIR1_PRVKA Ribonucleoside-diphosphate reductase large chain - Pseudorabies virus| (strain Kaplan) (PRV) Length = 835 Score = 50.8 bits (120), Expect(2) = 1e-06 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 14/108 (12%) Frame = +3 Query: 1542 GSCILNVLVLL*DMDCAGAGEGA-------FAVYLEPWHADIFEFLDLRKNHGKEEN-RA 1697 G C ++ +L +D A + VY+EPWHAD+ L++R +E+ R Sbjct: 322 GDCTRGIMAVLKALDSMTAAINSDSERPTGVCVYVEPWHADVRAVLNMRGMLAADESLRC 381 Query: 1698 RDLFFALWVPGLFMQRVQNNED------WSLFCPNEALGLADCWGGKF 1823 ++F LW P LF QR Q + D W+LF + A LA G F Sbjct: 382 DNIFSCLWTPDLFFQRYQRHLDGERAVKWTLF-DDRASHLASLHGPDF 428 Score = 23.9 bits (50), Expect(2) = 1e-06 Identities = 8/23 (34%), Positives = 17/23 (73%) Frame = +1 Query: 1873 IPAQTLWFDILKSQIETGTPYML 1941 +P Q + F I++S + TG+P+++ Sbjct: 445 LPIQDMAFLIVRSAVMTGSPFLM 467
>P50642:RIR1_EHV4 Ribonucleoside-diphosphate reductase large chain - Equine herpesvirus| 4 (strain 1942) (EHV-4) (Equine rhinopneumonitis virus) Length = 789 Score = 48.5 bits (114), Expect(2) = 1e-06 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 11/102 (10%) Frame = +3 Query: 1551 ILNVLVLL*DMDCAGAGEG----AFAVYLEPWHADIFEFLDLRKNHGKEEN-RARDLFFA 1715 ++ +L LL M A +G VY EPWHADI L++R ++E R ++F Sbjct: 273 VMALLKLLDSMTMAINSDGERPTGVCVYFEPWHADIRAILNMRGMLARDETVRCDNIFAC 332 Query: 1716 LWVPGLFMQRVQNNED------WSLFCPNEALGLADCWGGKF 1823 +W P LF R Q D W+LF + A L +G F Sbjct: 333 MWTPDLFFDRYQRYVDGESGIMWTLF-DDTASHLCHMYGNDF 373 Score = 26.2 bits (56), Expect(2) = 1e-06 Identities = 9/24 (37%), Positives = 18/24 (75%) Frame = +1 Query: 1873 IPAQTLWFDILKSQIETGTPYMLY 1944 IP Q + F I++S + TG+P++++ Sbjct: 390 IPIQDMAFIIVRSAVMTGSPFLMF 413
>P47473:RIR1_MYCGE Ribonucleoside-diphosphate reductase alpha subunit - Mycoplasma| genitalium Length = 721 Score = 50.1 bits (118), Expect(2) = 7e-06 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA AVYL H D+ +FLD ++ + E+ R + L L +P + Q +NNE +L Sbjct: 247 GQRQGAGAVYLHCHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFQLAKNNEMMAL 306 Query: 1773 FCP 1781 F P Sbjct: 307 FSP 309 Score = 21.9 bits (45), Expect(2) = 7e-06 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +1 Query: 1843 MRKQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 + Q +K I A+ + I + E+G PY+L+ Sbjct: 333 LENQRIKKTFISARKFFQTIAELHFESGYPYILF 366
>P03190:RIR1_EBV Ribonucleoside-diphosphate reductase large chain - Epstein-Barr virus| (strain B95-8) (HHV-4) (Human herpesvirus 4) Length = 826 Score = 52.4 bits (124), Expect = 8e-06 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%) Frame = +3 Query: 1614 AVYLEPWHADIFEFLD--LRKNHGKEENRARDLFFALWVPGLFMQRVQNN--EDWSLFCP 1781 A Y+EPWH+ IF+FL+ L +NH R +F L+VP LF + ++ DW LF P Sbjct: 257 AAYMEPWHSQIFKFLETKLPENH----ERCPGIFTGLFVPELFFKLFRDTPWSDWYLFDP 312 Query: 1782 NEALGLADCWGGKFE 1826 +A L +G +FE Sbjct: 313 KDAGDLERLYGEEFE 327
>P78027:RIR1_MYCPN Ribonucleoside-diphosphate reductase alpha subunit - Mycoplasma| pneumoniae Length = 721 Score = 50.4 bits (119), Expect(2) = 1e-05 Identities = 23/63 (36%), Positives = 36/63 (57%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G +GA AVYL H D+ +FLD ++ + E+ R + L L +P + +NNE+ +L Sbjct: 247 GQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFTLAKNNEEMAL 306 Query: 1773 FCP 1781 F P Sbjct: 307 FSP 309 Score = 20.8 bits (42), Expect(2) = 1e-05 Identities = 9/34 (26%), Positives = 18/34 (52%) Frame = +1 Query: 1843 MRKQAKQKKVIPAQTLWFDILKSQIETGTPYMLY 1944 + Q +K I A+ + + + E+G PY+L+ Sbjct: 333 LANQRIKKTFINARKFFQTVAELHFESGYPYILF 366
>P0A5W8:RIR1_MYCTU Ribonucleoside-diphosphate reductase alpha subunit - Mycobacterium| tuberculosis Length = 725 Score = 49.7 bits (117), Expect(2) = 2e-05 Identities = 23/63 (36%), Positives = 36/63 (57%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 GA +GA AVYL H DI+ FLD ++ + E+ R + L + +P + + + N+D L Sbjct: 260 GARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYL 319 Query: 1773 FCP 1781 F P Sbjct: 320 FSP 322 Score = 20.8 bits (42), Expect(2) = 2e-05 Identities = 8/28 (28%), Positives = 17/28 (60%) Frame = +1 Query: 1861 QKKVIPAQTLWFDILKSQIETGTPYMLY 1944 +K I A+ + + + Q E+G PY+++ Sbjct: 352 RKTKIKAREFFQTLAELQFESGYPYIMF 379
>P0A5W9:RIR1_MYCBO Ribonucleoside-diphosphate reductase alpha subunit - Mycobacterium| bovis Length = 725 Score = 49.7 bits (117), Expect(2) = 2e-05 Identities = 23/63 (36%), Positives = 36/63 (57%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 GA +GA AVYL H DI+ FLD ++ + E+ R + L + +P + + + N+D L Sbjct: 260 GARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYL 319 Query: 1773 FCP 1781 F P Sbjct: 320 FSP 322 Score = 20.8 bits (42), Expect(2) = 2e-05 Identities = 8/28 (28%), Positives = 17/28 (60%) Frame = +1 Query: 1861 QKKVIPAQTLWFDILKSQIETGTPYMLY 1944 +K I A+ + + + Q E+G PY+++ Sbjct: 352 RKTKIKAREFFQTLAELQFESGYPYIMF 379
>Q01037:RIR1_SHV21 Ribonucleoside-diphosphate reductase large chain - Saimiriine| herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) Length = 767 Score = 43.5 bits (101), Expect(2) = 3e-05 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = +3 Query: 1614 AVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNED--WSLFCPNE 1787 A Y+E WH I EFL + + +R +F + VP LF + +++ + W LF P + Sbjct: 262 ATYIEVWHCQIHEFLSAKL--PENPDRCNSIFQGVCVPSLFFKMYESDPNGLWYLFDPQD 319 Query: 1788 ALGLADCWGGKFE 1826 A L +G +FE Sbjct: 320 APNLTRLYGLEFE 332 Score = 26.6 bits (57), Expect(2) = 3e-05 Identities = 9/30 (30%), Positives = 21/30 (70%) Frame = +1 Query: 1852 QAKQKKVIPAQTLWFDILKSQIETGTPYML 1941 + K K+ + ++L F ++ + I+TG+PY++ Sbjct: 341 EKKYKQSVTLKSLMFSLINTIIKTGSPYVI 370
>Q9CBQ0:RIR1_MYCLE Ribonucleoside-diphosphate reductase alpha subunit - Mycobacterium| leprae Length = 721 Score = 48.5 bits (114), Expect(2) = 4e-05 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 GA +GA AVYL H DI+ FLD ++ + E+ R + L + +P + + + NED L Sbjct: 256 GARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVIIPDITFELAKRNEDMYL 315 Query: 1773 F 1775 F Sbjct: 316 F 316 Score = 20.8 bits (42), Expect(2) = 4e-05 Identities = 8/28 (28%), Positives = 17/28 (60%) Frame = +1 Query: 1861 QKKVIPAQTLWFDILKSQIETGTPYMLY 1944 +K I A+ + + + Q E+G PY+++ Sbjct: 348 RKTKIKAREFFQKLAELQFESGYPYVMF 375
>P50646:RIR1_BHV1C Ribonucleoside-diphosphate reductase large chain - Bovine herpesvirus| 1.1 (strain Cooper) (BoHV-1) (Infectious bovine rhinotracheitis virus) Length = 787 Score = 42.7 bits (99), Expect(2) = 7e-05 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%) Frame = +3 Query: 1617 VYLEPWHADIFEFLDLRKNHGKEEN-RARDLFFALWVPGLFMQR----VQNNED--WSLF 1775 VYLEPWH D+ L++R ++E+ R +LF LWVP L R ++ E W+LF Sbjct: 301 VYLEPWHCDVRAVLNMRGLLARDESTRCDNLFSCLWVPDLLFDRYLAHLEGREGVVWTLF 360 Score = 25.8 bits (55), Expect(2) = 7e-05 Identities = 9/26 (34%), Positives = 19/26 (73%) Frame = +1 Query: 1867 KVIPAQTLWFDILKSQIETGTPYMLY 1944 + +P Q L F I++S + TG+P++++ Sbjct: 390 ETVPVQDLAFLIVRSIVMTGSPFVMF 415
>P09248:RIR1_VZVD Ribonucleoside-diphosphate reductase large chain - Varicella-zoster| virus (strain Dumas) (HHV-3) (Human herpesvirus 3) Length = 775 Score = 42.0 bits (97), Expect(2) = 2e-04 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Frame = +3 Query: 1551 ILNVLVLL*DMDCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEE-NRARDLFFALWVP 1727 +L+ +V+ + DC VY+EPWH D+ L R ++E R ++F LW P Sbjct: 272 LLDCMVMAINSDCERPT--GVCVYIEPWHVDLQTVLATRGMLVRDEIFRCDNIFCCLWTP 329 Query: 1728 GLFMQRV------QNNEDWSLF 1775 LF +R +N W+LF Sbjct: 330 DLFFERYLSYLKGASNVQWTLF 351 Score = 25.4 bits (54), Expect(2) = 2e-04 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = +1 Query: 1873 IPAQTLWFDILKSQIETGTPYMLY 1944 +P Q + F I++S TG+P++++ Sbjct: 383 VPIQDIAFTIIRSAAVTGSPFLMF 406
>P00452:RIR1_ECOLI Ribonucleoside-diphosphate reductase 1 subunit alpha - Escherichia| coli Length = 761 Score = 47.4 bits (111), Expect = 3e-04 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA ++ WH ++ L L+ N G E NR R + + + + L R+ ED +L Sbjct: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITL 355 Query: 1773 FCPNEALGLADCW 1811 F P++ GL D + Sbjct: 356 FSPSDVPGLYDAF 368
>Q08698:RIR3_SALTY Ribonucleoside-diphosphate reductase 2 alpha subunit - Salmonella| typhimurium Length = 714 Score = 45.8 bits (107), Expect(2) = 3e-04 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 GA +GA AVYL H DI FLD ++ + E+ R + L + +P + + + N +L Sbjct: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFRLAKENAQMAL 308 Query: 1773 FCP 1781 F P Sbjct: 309 FSP 311 Score = 20.8 bits (42), Expect(2) = 3e-04 Identities = 8/28 (28%), Positives = 17/28 (60%) Frame = +1 Query: 1861 QKKVIPAQTLWFDILKSQIETGTPYMLY 1944 +K I A+ + + + Q E+G PY+++ Sbjct: 341 RKTYINARDFFQTLAEIQFESGYPYIMF 368
>P57276:RIR1_BUCAI Ribonucleoside-diphosphate reductase alpha subunit - Buchnera| aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 761 Score = 46.6 bits (109), Expect = 4e-04 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA ++ WH ++ L L+ N G EENR R + +A+ + L QR+ + + +L Sbjct: 296 GVRGGAATIFYPIWHLEVESLLVLKNNRGIEENRVRHIDYAIQINKLMYQRMLSGDQITL 355 Query: 1773 FCPNE 1787 F P++ Sbjct: 356 FSPSD 360
>P32282:RIR1_BPT4 Ribonucleoside-diphosphate reductase subunit alpha - Bacteriophage T4| Length = 754 Score = 46.6 bits (109), Expect = 4e-04 Identities = 24/68 (35%), Positives = 35/68 (51%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA Y WH ++ L L+ N G EENR R + + + + L M+R N+ +L Sbjct: 293 GIRGGAATAYYPIWHLEVENLLVLKNNKGVEENRIRHMDYGVQLNDLMMERFGKNDYITL 352 Query: 1773 FCPNEALG 1796 F P+E G Sbjct: 353 FSPHEMGG 360
>Q8K9W3:RIR1_BUCAP Ribonucleoside-diphosphate reductase alpha subunit - Buchnera| aphidicola subsp. Schizaphis graminum Length = 763 Score = 45.8 bits (107), Expect = 7e-04 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA V+ WH +I L L+ N G EENR R L +A+ + L QR+ + +L Sbjct: 296 GVRGGAATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKLMYQRMLLGQKITL 355 Query: 1773 FCPNE 1787 F P++ Sbjct: 356 FSPSD 360
>P39452:RIR3_ECOLI Ribonucleoside-diphosphate reductase 2 alpha subunit - Escherichia| coli Length = 714 Score = 45.4 bits (106), Expect = 0.001 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 GA +GA AVYL H DI FLD ++ + E+ R + L + +P + + N +L Sbjct: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 Query: 1773 FCP 1781 F P Sbjct: 309 FSP 311
>Q89AS4:RIR1_BUCBP Ribonucleoside-diphosphate reductase alpha subunit - Buchnera| aphidicola subsp. Baizongia pistaciae Length = 761 Score = 45.1 bits (105), Expect = 0.001 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA ++ WH +I L L+ N G EENR R + +++ + L QR+ E +L Sbjct: 296 GVRGGAATIFYPIWHFEIESLLVLKNNRGIEENRVRHMDYSVQLNKLMYQRLILGEHITL 355 Query: 1773 FCPNEALGLAD 1805 F P++ L D Sbjct: 356 FSPSDVPNLYD 366
>P37426:RIR1_SALTY Ribonucleoside-diphosphate reductase 1 subunit alpha - Salmonella| typhimurium Length = 761 Score = 44.7 bits (104), Expect = 0.002 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA ++ WH ++ L L+ N G E NR R + + + + L R+ D +L Sbjct: 296 GVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGGDITL 355 Query: 1773 FCPNEALGLADCW 1811 F P++ GL D + Sbjct: 356 FSPSDVPGLYDAF 368
>P43754:RIR1_HAEIN Ribonucleoside-diphosphate reductase alpha subunit - Haemophilus| influenzae Length = 756 Score = 44.7 bits (104), Expect = 0.002 Identities = 22/73 (30%), Positives = 37/73 (50%) Frame = +3 Query: 1593 GAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNEDWSL 1772 G GA +Y WH + L L+ N G E+NR R + + + + L QR+ + +L Sbjct: 296 GVRGGAATLYYPIWHLEAENLLVLKNNRGVEDNRVRHMDYGVQLNKLMYQRLIKGSEITL 355 Query: 1773 FCPNEALGLADCW 1811 F P++ GL + + Sbjct: 356 FSPSDVPGLYEAF 368
>P50620:RIR1_BACSU Ribonucleoside-diphosphate reductase alpha subunit - Bacillus| subtilis Length = 700 Score = 39.3 bits (90), Expect = 0.069 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = +3 Query: 1584 DCAGAGEGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQNNED 1763 D G +G+ A YL +H DI +FLD +K E+ R + L + +P F++ + ++ Sbjct: 238 DQMGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKA 297 Query: 1764 WSLFCPN 1784 +F P+ Sbjct: 298 AYVFYPH 304
>P52343:RIR1_HHV6U Ribonucleoside-diphosphate reductase large chain - Human herpesvirus| 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) Length = 804 Score = 38.9 bits (89), Expect = 0.090 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 1617 VYLEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPGLFMQRVQ-NNEDWSLFCPNEAL 1793 VY+E WH +LDL + + + F L +PG+FM R + WSLF N A Sbjct: 301 VYVEVWHVSALMWLDLYEALPQTSR----VTFCLIIPGIFMDRYELKRAQWSLFHKNIAF 356 Query: 1794 GLADC 1808 L C Sbjct: 357 ELGKC 361
>Q97CP8:VATD_THEVO V-type ATP synthase subunit D - Thermoplasma volcanium| Length = 209 Score = 33.5 bits (75), Expect = 3.8 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +1 Query: 337 LRSSWSTRSM-DSGRSELVDLLKTIRTSEVLESRTSL--INQLEGSSQFSAED---LGLI 498 L+ S + R M ++ R E+ D L TIRT+E+LE + +L I + S + + +G++ Sbjct: 39 LQISRTIRGMRENLRREVEDALNTIRTAEILEGQVALERIANMSSDSTINVDSRNVMGVV 98 Query: 499 LETLTVSWDDSRCSSV 546 + TL ++++ S S V Sbjct: 99 IPTLNLTYNLSILSDV 114
>Q5JY77:GASP1_HUMAN G-protein coupled receptor-associated sorting protein 1 - Homo| sapiens (Human) Length = 1395 Score = 33.1 bits (74), Expect = 4.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 406 WFLGGRPARFSHCPSSGCSSLNEGRHRIDREPCLD 302 WF G+ A+F +G + N RHR RE C+D Sbjct: 308 WFGAGKEAKFRSKMRAGKEANNRARHRAKREACID 342
>P32997:VG07_VARV Protein G7 - Variola virus| Length = 371 Score = 32.7 bits (73), Expect = 6.5 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Frame = +3 Query: 831 KC*LQCETRNIRLTDSILELCFY*SRVHIKVRFLHLCYVPPHK--SLWNELYNHCISNLF 1004 KC +Q R+I + +I+ + LCY P K S+ N +YN C SN+ Sbjct: 16 KCIVQSVLRDISINSE-----------YIESKAKQLCYCPASKKESVINGIYNCCESNIE 64 Query: 1005 IITRAPLALCL--LLIHSPLRCSSNKY-DLYNGIQ 1100 I+ + L L L HS C++ + LYN ++ Sbjct: 65 IMDKEQLLKILDNLRCHSAHVCNATDFWRLYNSLK 99
>P68716:VG07_VACCV Protein G7 - Vaccinia virus (strain Western Reserve / WR) (VACV)| Length = 371 Score = 32.7 bits (73), Expect = 6.5 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Frame = +3 Query: 831 KC*LQCETRNIRLTDSILELCFY*SRVHIKVRFLHLCYVPPHK--SLWNELYNHCISNLF 1004 KC +Q R+I + +I+ + LCY P K S+ N +YN C SN+ Sbjct: 16 KCIVQSVLRDISINSE-----------YIESKAKQLCYCPASKKESVINGIYNCCESNIE 64 Query: 1005 IITRAPLALCL--LLIHSPLRCSSNKY-DLYNGIQ 1100 I+ + L L L HS C++ + LYN ++ Sbjct: 65 IMDKEQLLKILDNLRCHSAHVCNATDFWRLYNSLK 99
>P21028:VG07_VACCC Protein G7 - Vaccinia virus (strain Copenhagen) (VACV)| Length = 371 Score = 32.7 bits (73), Expect = 6.5 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Frame = +3 Query: 831 KC*LQCETRNIRLTDSILELCFY*SRVHIKVRFLHLCYVPPHK--SLWNELYNHCISNLF 1004 KC +Q R+I + +I+ + LCY P K S+ N +YN C SN+ Sbjct: 16 KCIVQSVLRDISINSE-----------YIESKAKQLCYCPASKKESVINGIYNCCESNIE 64 Query: 1005 IITRAPLALCL--LLIHSPLRCSSNKY-DLYNGIQ 1100 I+ + L L L HS C++ + LYN ++ Sbjct: 65 IMDKEQLLKILDNLRCHSAHVCNATDFWRLYNSLK 99
>P68715:VG07_VACCA Protein G7 - Vaccinia virus (strain Ankara) (VACV)| Length = 371 Score = 32.7 bits (73), Expect = 6.5 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Frame = +3 Query: 831 KC*LQCETRNIRLTDSILELCFY*SRVHIKVRFLHLCYVPPHK--SLWNELYNHCISNLF 1004 KC +Q R+I + +I+ + LCY P K S+ N +YN C SN+ Sbjct: 16 KCIVQSVLRDISINSE-----------YIESKAKQLCYCPASKKESVINGIYNCCESNIE 64 Query: 1005 IITRAPLALCL--LLIHSPLRCSSNKY-DLYNGIQ 1100 I+ + L L L HS C++ + LYN ++ Sbjct: 65 IMDKEQLLKILDNLRCHSAHVCNATDFWRLYNSLK 99
>Q0CIV4:BST1_ASPTN GPI inositol-deacylase - Aspergillus terreus (strain NIH 2624)| Length = 1160 Score = 32.3 bits (72), Expect = 8.4 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -1 Query: 521 QDTVRVSSIRPRSSAENWEEPSSWLIREVLLSKTSEVLMVFRRSTSSLLPLSIERVLQLE 342 +D S+ R R+S+ W PSS T+ +L RS+S+ +PL+ +R+L Sbjct: 53 RDHTGASTPRSRNSS-TWRMPSS---------ATTTLLPPDPRSSSAAMPLTSQRLLAEA 102 Query: 341 RRPTQNRSRTLP-RSPW 294 Q+RSR RSPW Sbjct: 103 SPDAQSRSRPARLRSPW 119 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 372,012,914 Number of extensions: 8019138 Number of successful extensions: 19881 Number of sequences better than 10.0: 63 Number of HSP's gapped: 19869 Number of HSP's successfully gapped: 102 Length of query: 734 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 613 Effective length of database: 67,496,744 Effective search space: 41375504072 Effective search space used: 41375504072 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
