ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf132l11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O83455:PPNK_TREPA Probable inorganic polyphosphate/ATP-NAD kinas... 35 1.5
2Q9BST9:RTKN_HUMAN Rhotekin - Homo sapiens (Human) 34 2.0
3Q9H2Y7:ZF106_HUMAN Zinc finger protein 106 homolog - Homo sapien... 33 5.7
4Q10571:MN1_HUMAN Probable tumor suppressor protein MN1 - Homo sa... 32 9.7

>O83455:PPNK_TREPA Probable inorganic polyphosphate/ATP-NAD kinase - Treponema pallidum|
          Length = 305
 Score = 34.7 bits (78), Expect = 1.5
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +2

Query: 866  RIWQAAMDDLMAQGMRSASQALLSGCSAGGASAILHCDEFNGMFPSNTRVKCLADAGMFL 1045
            R WQ A+ D +A G+R A +AL+S         I  C   N +  S+ RV  L  A +  
Sbjct: 110  RYWQQALSDYLAGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVARLTRAEVCF 169

Query: 1046 DSV 1054
            + +
Sbjct: 170  NDI 172



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>Q9BST9:RTKN_HUMAN Rhotekin - Homo sapiens (Human)|
          Length = 563

 Score = 34.3 bits (77), Expect = 2.0
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -3

Query: 461 PACHSPTARSRAPLP----PRTRGAGQEGAKNPW 372
           P  HSP ARS APLP    PRTRG   +G    W
Sbjct: 525 PPDHSPRARSVAPLPPQRSPRTRGLCSKGQPRTW 558



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>Q9H2Y7:ZF106_HUMAN Zinc finger protein 106 homolog - Homo sapiens (Human)|
          Length = 1883

 Score = 32.7 bits (73), Expect = 5.7
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
 Frame = +2

Query: 584 LHRGSGSGSNNWLVNLEGGGWCNDVKSC----------VFRKGSRRGSSNHMERQLQFTG 733
           L  G+G G ++W +N   G W + V+S            F+ G  R S+  ME       
Sbjct: 206 LSEGTG-GFSSWHMNNSNGNWKSSVRSTNNWNYSGPGDKFQPGRNRNSNCQMEDMTMLWN 264

Query: 734 IMSNRPEE-NPDFYNWNR 784
             SN+  + + D YNW R
Sbjct: 265 KKSNKSNKYSHDRYNWQR 282



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>Q10571:MN1_HUMAN Probable tumor suppressor protein MN1 - Homo sapiens (Human)|
          Length = 1319

 Score = 32.0 bits (71), Expect = 9.7
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -3

Query: 458  ACHSPTARSRAPLPPRTRGAGQEGAKNPWPSALPLKLSRSSPGT 327
            A  SP       LPPR  GAG+ G K P P AL L +  +S  T
Sbjct: 1071 ASRSPLVTGSPKLPPRGVGAGEHGPKAP-PPALGLGIMSNSTST 1113


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 376,459,930
Number of extensions: 8753488
Number of successful extensions: 26341
Number of sequences better than 10.0: 4
Number of HSP's gapped: 26322
Number of HSP's successfully gapped: 4
Length of query: 657
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 537
Effective length of database: 67,771,039
Effective search space: 36393047943
Effective search space used: 36393047943
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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