ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61e11 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g42570:12002.t03842:unspliced-genomic ferredoxin-thioredoxin reductase, variable chain, putative,| expressed Length = 876 Score = 154 bits (330), Expect(3) = 1e-43 Identities = 60/74 (81%), Positives = 69/74 (93%) Frame = +2 / +1 Query: 374 APKVGRRVRVTAPLRVYHVVKAPDLDIQGMEGVIKQYVGVWKGKRITANFPFKVEFQLTV 553 APK+G+RVRVTAP+RVYHV+KAPDLDI+GMEGV+KQYV VWKGKRITANFPFKVEF L+V Sbjct: 355 APKIGKRVRVTAPVRVYHVMKAPDLDIKGMEGVVKQYVAVWKGKRITANFPFKVEFHLSV 534 Query: 554 DTQPKPVKLFVHLR 595 + Q KPV+ FVHLR Sbjct: 535 EGQDKPVRFFVHLR 576 Score = 37.7 bits (76), Expect(3) = 1e-43 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = +2 / +3 Query: 14 SLVYPFLHLSLPGLLSYTPLPRAHHLFD 97 S V P LHLS P + +T RAHHLFD Sbjct: 18 SPVPPHLHLSFPTPILFTRFSRAHHLFD 101 Score = 28.6 bits (56), Expect(3) = 1e-43 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 / +2 Query: 682 SRPPSLYTIIMAAV*ACVYCSGVCV 756 S+P + IM A ACVYC G V Sbjct: 629 SKPSAFCYTIMTAAVACVYCFGCVV 703 Score = 138 bits (297), Expect(4) = 6e-43 Identities = 56/72 (77%), Positives = 59/72 (81%) Frame = -2 / -2 Query: 588 WTKSLTGLGWVSTVSWNSTLKGKLAVMRLPFQTPTYCLMTPSMPWMSRSGALTTW*TRRG 409 WTK+LTGL W ST+ WNSTLKGKLAVMR PFQT TYCL TPS+P MSRSGA TW TR G Sbjct: 569 WTKNLTGLSWPSTLRWNSTLKGKLAVMRFPFQTATYCLTTPSIPLMSRSGAFMTWYTRTG 390 Query: 408 AVTRTRLPTLGA 373 AVTRTR P LGA Sbjct: 389 AVTRTRFPILGA 354 Score = 40.5 bits (82), Expect(4) = 6e-43 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -2 / -3 Query: 96 SNRWWARGRGV*DRSPGNERWRNG*TSE 13 SNRWWAR V GNERWR G T E Sbjct: 100 SNRWWARENRVKRIGVGNERWRCGGTGE 17 Score = 33.6 bits (67), Expect(4) = 6e-43 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -2 / -3 Query: 774 ALTRKTHTHTGTIYTRLHCGHYYCIKGRR 688 +L+ +H T TIYT CGHY KG R Sbjct: 721 SLSHLSHHTTETIYTCHSCGHYCITKGAR 635 Score = 23.5 bits (45), Expect(4) = 6e-43 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = -1 / -1 Query: 889 SEKKIDVELEEEQ 851 + +K+DVELEEE+ Sbjct: 807 TSEKLDVELEEEE 769 Score = 56.1 bits (116), Expect(3) = 2e-10 Identities = 23/34 (67%), Positives = 25/34 (73%) Frame = +1 / +3 Query: 481 VRRRLEGQAHHRQLPLQGRVPAHRRHPAQAGQAL 582 VR RLEG+AHH Q PLQG VP+ R P QAGQ L Sbjct: 462 VRGRLEGEAHHGQFPLQGGVPSQRGGPGQAGQVL 563 Score = 28.1 bits (55), Expect(3) = 2e-10 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +3 / +1 Query: 699 LYNNNGRSVGVCILFR 746 L NN RS G+CILFR Sbjct: 646 LLYNNDRSCGMCILFR 693 Score = 22.6 bits (43), Expect(3) = 2e-10 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +1 / +2 Query: 115 HTRPTFQSLPRPP 153 H P + LPRPP Sbjct: 53 HAYPLYSVLPRPP 91 Score = 40.0 bits (81), Expect(4) = 5e-09 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = -1 / -1 Query: 451 VQVGRLDDVVDAEGRRDAHAPAD 383 VQVGRL DVV A GRRD+HA D Sbjct: 432 VQVGRLHDVVHAHGRRDSHALPD 364 Score = 28.6 bits (56), Expect(4) = 5e-09 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -3 / -3 Query: 539 TRP*RGSWR*CACPS 495 T P*RG+W *CA PS Sbjct: 520 TPP*RGNWP*CASPS 476 Score = 27.2 bits (53), Expect(4) = 5e-09 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 / -2 Query: 748 HRNNIHTPTLRPLLLYK 698 +RNNIH P LR LL K Sbjct: 695 NRNNIHMPQLRSLLYNK 645 Score = 23.5 bits (45), Expect(4) = 5e-09 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -2 / -3 Query: 120 RVEGSGVGSNRWWARGRG 67 RV+ GVG+ RW G G Sbjct: 73 RVKRIGVGNERWRCGGTG 20
>LOC_Os04g44650:12004.t04005:unspliced-genomic ferredoxin-thioredoxin reductase, variable chain, putative,| expressed Length = 871 Score = 148 bits (317), Expect = 7e-35 Identities = 58/74 (78%), Positives = 66/74 (89%) Frame = +2 / +3 Query: 374 APKVGRRVRVTAPLRVYHVVKAPDLDIQGMEGVIKQYVGVWKGKRITANFPFKVEFQLTV 553 APK+G+RVRVTAP+RV+HV KAPDLDI GMEGV+KQYVG+WKGKRITAN PFKVEF+L V Sbjct: 354 APKIGKRVRVTAPVRVHHVSKAPDLDICGMEGVVKQYVGIWKGKRITANLPFKVEFELRV 533 Query: 554 DTQPKPVKLFVHLR 595 D Q KPV+ F HLR Sbjct: 534 DGQDKPVRFFAHLR 575 Score = 130 bits (279), Expect = 1e-29 Identities = 56/72 (77%), Positives = 59/72 (81%) Frame = -2 / -1 Query: 588 WTKSLTGLGWVSTVSWNSTLKGKLAVMRLPFQTPTYCLMTPSMPWMSRSGALTTW*TRRG 409 W K+ TGL ST+S NSTLKG+LAVMRLPFQ PTYCL TPSMP MSRSGAL TW TR G Sbjct: 568 WAKNRTGLSCPSTLSSNSTLKGRLAVMRLPFQMPTYCLTTPSMPQMSRSGALETWWTRTG 389 Query: 408 AVTRTRLPTLGA 373 AVTRTRLP LGA Sbjct: 388 AVTRTRLPILGA 353 Score = 38.6 bits (78), Expect(2) = 1e-05 Identities = 18/23 (78%), Positives = 18/23 (78%) Frame = -1 / -3 Query: 451 VQVGRLDDVVDAEGRRDAHAPAD 383 VQV RL DVVDA RRDAHA AD Sbjct: 431 VQVRRLGDVVDAYRRRDAHALAD 363 Score = 30.9 bits (61), Expect(2) = 1e-05 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 539 TRP*RGSWR*CACPS 495 T P*RG W *C CPS Sbjct: 519 TPP*RGDWP*CVCPS 475 Score = 41.4 bits (84), Expect = 0.010 Identities = 19/34 (55%), Positives = 19/34 (55%) Frame = +1 / +2 Query: 481 VRRRLEGQAHHRQLPLQGRVPAHRRHPAQAGQAL 582 VRR LEGQ HH Q PLQG V A Q G L Sbjct: 461 VRRHLEGQTHHGQSPLQGGVRAQGGWAGQTGPVL 562
>LOC_Os11g24570:12011.t02078:unspliced-genomic EMB1796, putative, expressed| Length = 2344 Score = 30.9 bits (61), Expect(2) = 0.042 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 / -3 Query: 779 PLLSPEKHTHTPEQYTHAYTAAII 708 PLLSP +H HT Y H +++ Sbjct: 1817 PLLSPSQHPHTTSSYPHLSHLSVV 1746 Score = 30.4 bits (60), Expect(2) = 0.042 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -2 / -3 Query: 111 GSGVGSNRWWARG 73 GSG G RWWARG Sbjct: 767 GSGRGCGRWWARG 729
>LOC_Os08g43000:12008.t04028:unspliced-genomic CC-NBS-LRR, putative, expressed| Length = 3633 Score = 38.6 bits (78), Expect = 0.068 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +1 / +3 Query: 484 RRRLEGQAHHRQLPLQGRVPAHRRHPAQAGQAL 582 RRRL G+ R+LPL+G P RRH Q + L Sbjct: 213 RRRLRGRRRPRRLPLRGAAPRRRRHRRQGTRLL 311
>LOC_Os07g06450:12007.t00525:unspliced-genomic ribonucleoprotein, chloroplast precursor, putative, expressed| Length = 1994 Score = 38.6 bits (78), Expect = 0.068 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -2 / -1 Query: 807 PNSYPLQSSSLALTRKTHTHTGTIYTRLH 721 P S PLQSS A T K H+H T TR H Sbjct: 860 PGSSPLQSSLQAATHKAHSHNATKLTRFH 774
>LOC_Os06g48770:12006.t04563:unspliced-genomic retrotransposon protein, putative, SINE subclass, expressed| Length = 7741 Score = 38.2 bits (77), Expect = 0.093 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +3 / +2 Query: 45 CPGSYPTPLSRAPTTCSTRRR 107 CP S P+P +RAPT CST RR Sbjct: 7325 CPTSSPSPATRAPTWCSTSRR 7387
>LOC_Os10g25780:12010.t01994:unspliced-genomic cell elongation protein diminuto, putative, expressed| Length = 3680 Score = 36.8 bits (74), Expect = 0.24 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 / -1 Query: 105 GVGSNRWWARGRGV*DRSPGNERWRNG 25 GVGS RWW R G+ D S G ER G Sbjct: 161 GVGSRRWWWRSLGMGDSSSGVERTAQG 81
>LOC_Os08g02690:12008.t00163:unspliced-genomic topoisomerase-like protein, putative, expressed| Length = 5315 Score = 36.8 bits (74), Expect = 0.24 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +1 / -1 Query: 496 EGQAHHRQLPLQGRVPAHRRHP 561 E QAHH+ L G VPAH RHP Sbjct: 3794 EAQAHHQSLLWLGTVPAHLRHP 3729
>LOC_Os10g05130:12010.t00392:unspliced-genomic expressed protein| Length = 1343 Score = 30.4 bits (60), Expect(2) = 0.50 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 / +1 Query: 973 FFFFFLRAKIIIVIL*NYQSSLSDQFPTSEKKID 872 FFFFF + +I *+YQ L +FP +D Sbjct: 190 FFFFFASVFALFIIK*SYQHVLDAEFPQLALPLD 291 Score = 26.3 bits (51), Expect(2) = 0.50 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 / +1 Query: 120 RVEGSGVGSNRWWARGRGV*DRSPGNERWR 31 R+ G G+ S RGRG R G RWR Sbjct: 625 RL*GGGLRSRGRRGRGRGRRGRRSGGGRWR 714
>LOC_Os04g31580:12004.t02839:unspliced-genomic F-box domain containing protein| Length = 1575 Score = 30.4 bits (60), Expect(2) = 1.4 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = -2 / -3 Query: 129 CGARVEGSGVGSNRWWARGRGV*DRSPGNERWRNG 25 CG R S S R ARG G R P R NG Sbjct: 187 CGRRAPSSTAASRRGRARGGGARRRGPPRRRATNG 83 Score = 24.9 bits (48), Expect(2) = 1.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 / -2 Query: 489 PTYCLMTPSMPWMSRSGALTTW*TRRGAVTRTR 391 PT C T S+P S + + T TRR TR R Sbjct: 1070 PTLCSYTVSVPPSSDTASGRTTPTRRRKSTRHR 972
>LOC_Os01g48710:12001.t04314:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1023 Score = 34.1 bits (68), Expect = 1.6 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 / -2 Query: 45 CPGSYPTPLSRAPTTCSTRRRS 110 CP S P P R+P+ CS+RRR+ Sbjct: 434 CPRSPPRPPPRSPSACSSRRRT 369
>LOC_Os03g51010:12003.t04432:unspliced-genomic monoglyceride lipase, putative, expressed| Length = 3568 Score = 34.1 bits (68), Expect = 1.6 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 / -1 Query: 493 LEGQAHHRQLPLQGRVPAHRRHP 561 L+GQA H QL + GR P H+ P Sbjct: 2446 LDGQAEHEQLVMSGRCPQHKNLP 2378
>LOC_Os09g32210:12009.t02837:unspliced-genomic pumilio domain-containing protein PPD1, putative, expressed| Length = 7049 Score = 25.8 bits (50), Expect(2) = 2.1 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 / -1 Query: 759 THTHTGTIYTRLHCGH 712 THTH T HC H Sbjct: 332 THTHINRAQTEKHCSH 285 Score = 24.9 bits (48), Expect(2) = 2.1 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 / -3 Query: 801 SYPLQSSSLALTRKTHTHTGT 739 S PL+ L + THTHT T Sbjct: 384 SNPLKKKKLKASINTHTHTHT 322
>LOC_Os02g54340:12002.t05013:unspliced-genomic 26S protease regulatory subunit 7, putative, expressed| Length = 4046 Score = 33.6 bits (67), Expect = 2.2 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 / -2 Query: 651 LLCNNCTWPSKPTAFPLYNNN 713 ++CN C WPS+P FP + + Sbjct: 2983 MICNTCLWPSEP*CFPSHQTH 2921
>LOC_Os04g26120:12004.t02319:unspliced-genomic conserved hypothetical protein| Length = 4807 Score = 33.6 bits (67), Expect = 2.2 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -2 / -1 Query: 540 NSTLKGKLAVMRLPFQTPTYCLMTPSMPWMSRSGAL 433 N+ GKL + PF P YCL PS W S+ AL Sbjct: 3802 NTRSIGKLGL*YFPFSFPLYCLHLPSN*WRSQLLAL 3695
>LOC_Os12g17070:12012.t01559:unspliced-genomic oxygen-independent coproporphyrinogen III oxidase-like protein| sll1917, putative, expressed Length = 5662 Score = 28.6 bits (56), Expect(2) = 2.4 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -2 / -2 Query: 111 GSGVGSNRWWA 79 G G+G NRWWA Sbjct: 123 GRGIGPNRWWA 91 Score = 27.6 bits (54), Expect(2) = 2.4 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 / -2 Query: 781 IPCSHQKNTHTHRNNIHTPTLRPLL 707 +PC +N TH + +H P P L Sbjct: 3189 LPCPLSQNCQTHGSTLHFPISEPTL 3115
>LOC_Os11g07370:12011.t00628:unspliced-genomic hypothetical protein| Length = 1879 Score = 28.6 bits (56), Expect(2) = 3.0 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +1 / +3 Query: 484 RRRLEGQAHHRQLPLQGRVPAHRRHPAQA 570 R RL + R LPLQ R HRR PA A Sbjct: 384 RARLRQRHRGRLLPLQRRRRRHRR*PATA 470 Score = 25.8 bits (50), Expect(2) = 3.0 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 / +2 Query: 48 PGSYPTPLSRAPT 86 P S PTPL+R+PT Sbjct: 146 PASPPTPLARSPT 184
>LOC_Os01g32640:12001.t02837:unspliced-genomic expressed protein| Length = 3699 Score = 28.1 bits (55), Expect(2) = 3.0 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +2 / -3 Query: 17 LVYPFLHLSLPGLLSYTPLPRAHH 88 L++ + L P L+YTP + HH Sbjct: 2395 LIFFYFTLHYPSTLTYTPFNKGHH 2324 Score = 27.2 bits (53), Expect(2) = 3.0 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 / -1 Query: 484 RRRLEGQAHHRQLPLQGRVPAH 549 RRR EG+ HR QGR P H Sbjct: 129 RRRREGRGVHRSGE*QGRGPRH 64
>LOC_Os04g25250:12004.t02234:unspliced-genomic conserved hypothetical protein| Length = 2896 Score = 33.1 bits (66), Expect = 3.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -2 / -3 Query: 525 GKLAVMRLPFQTPTYCLMTPSMPWMSRSGAL 433 GKL + PF P YCL PS W S+ AL Sbjct: 2144 GKLGL*YFPFSFPLYCLHLPSN*WRSQLLAL 2052
>LOC_Os03g62410:12003.t05466:unspliced-genomic phospholipase D gamma 3, putative, expressed| Length = 4702 Score = 33.1 bits (66), Expect = 3.1 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 / +1 Query: 484 RRRLEGQAHHRQLPLQGRVPAHRRHPAQAG 573 RRR + Q H Q PL+ R+P R A AG Sbjct: 319 RRRRQAQEDHHQRPLRLRLPRRRHRRADAG 408
>LOC_Os08g35760:12008.t03316:unspliced-genomic auxin-binding protein ABP20 precursor, putative, expressed| Length = 1205 Score = 27.2 bits (53), Expect(2) = 3.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3 / +3 Query: 48 PGSYPTPLSRAPTTCST 98 P + PTP SR+PTT S+ Sbjct: 651 PSAAPTPASRSPTTPSS 701 Score = 26.3 bits (51), Expect(2) = 3.6 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 / +2 Query: 694 SLYTIIMAAV*ACVYCSGVCV 756 S+ + + AV +CVYCSG V Sbjct: 1070 SVQSFVWHAVVSCVYCSGFSV 1132
>LOC_Os04g46170:12004.t04149:unspliced-genomic expressed protein| Length = 2544 Score = 25.8 bits (50), Expect(2) = 4.1 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = -3 / -2 Query: 839 QASNQLPAHAFLIPTLFSLHPLLSPEKHTHTPEQYT 732 Q++ + H L+ LHP P H H + +T Sbjct: 1277 QSTQRQHLHPSLLRETLHLHPSQPPHHHPHPKQAWT 1170 Score = 24.0 bits (46), Expect(2) = 4.1 Identities = 6/11 (54%), Positives = 8/11 (72%) Frame = -2 / -2 Query: 921 INHHYPINSPH 889 +NH YP+ PH Sbjct: 1346 VNHTYPVRCPH 1314
>LOC_Os06g43470:12006.t04037:unspliced-genomic cytochrome P450 71A9, putative| Length = 984 Score = 32.7 bits (65), Expect = 4.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 / +3 Query: 481 VRRRLEGQAHHRQLPLQGR 537 VRRRL G HHR+ P+QG+ Sbjct: 573 VRRRLVGARHHRKRPVQGQ 629
>LOC_Os05g06510:12005.t00541:unspliced-genomic 4Fe-4S ferredoxin, iron-sulfur binding protein, putative, expressed| Length = 4040 Score = 32.7 bits (65), Expect = 4.2 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +1 / -1 Query: 493 LEGQAHHRQLPLQGRVPAHRRHPAQ 567 LE QA+ RQ +QGR HR+HP Q Sbjct: 656 LEQQAYLRQACIQGRDS*HRQHPTQ 582
>LOC_Os02g53850:12002.t04964:unspliced-genomic xylem serine proteinase 1 precursor, putative, expressed| Length = 2347 Score = 32.7 bits (65), Expect = 4.2 Identities = 16/33 (48%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 481 VRRRLEGQAHHRQLPLQGRVPAHRRHPAQAGQA 579 VRRR G H Q Q R HRR A AG A Sbjct: 2044 VRRRYHGATHRAQRRRQRRRRVHRRRGATAGHA 2142
>LOC_Os03g16110:12003.t01397:unspliced-genomic serine/threonine-protein phosphatase PP1, putative, expressed| Length = 5617 Score = 32.2 bits (64), Expect(2) = 4.3 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 816 SCVPNSYPLQSSSLALTRKTHTHTGTIYTRLHCGHYYCIKGRR 688 SC P S SSS++++ ++ TG + GHYY RR Sbjct: 1840 SCFPTSPTSPSSSISVSGRSREETGPSWEICSQGHYYGEVSRR 1712 Score = 23.1 bits (44), Expect(2) = 4.3 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -3 / -2 Query: 152 GGRGSDWNVGRVW 114 G R DW VGR W Sbjct: 51 GERERDWAVGRRW 13
>LOC_Os07g10940:12007.t00968:unspliced-genomic exo70 exocyst complex subunit family protein| Length = 9339 Score = 32.2 bits (64), Expect = 5.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 / -1 Query: 699 LYNNNGRSVGVCILFRCVCVFFW 767 L NNNG+++ + +F VC FW Sbjct: 1962 LTNNNGKAINLSTIFLLVCFHFW 1894
>LOC_Os10g40590:12010.t03299:unspliced-genomic oxysterol-binding protein 1, putative, expressed| Length = 5437 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 484 RRRLEGQAHHRQLPLQGRVPAHRRHPAQ 567 RRR + + HR+ P + R PAHR P+Q Sbjct: 488 RRRSQRRQAHRRAPRRRRGPAHRIRPSQ 571
>LOC_Os09g29930:12009.t02671:unspliced-genomic transcription factor BIM2, putative, expressed| Length = 7496 Score = 32.2 bits (64), Expect = 5.8 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -2 / -1 Query: 111 GSGVGSNRWWARGR 70 G G+ S+RWWARGR Sbjct: 2510 GRGIWSSRWWARGR 2469
>LOC_Os06g48000:12006.t04486:unspliced-genomic peroxidase 16 precursor, putative, expressed| Length = 1700 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 / +3 Query: 970 FFFFLRAKIIIVIL*NYQSSLSDQFPTSEKKI 875 FFFFL +++ L ++ LSDQ EKK+ Sbjct: 639 FFFFLATVFVLLFLSSFNIGLSDQLRCVEKKL 734
>LOC_Os06g43870:12006.t04077:unspliced-genomic expressed protein| Length = 4001 Score = 32.2 bits (64), Expect = 5.8 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 / -2 Query: 508 HHRQLPLQGRVPAHRRHPAQAGQA 579 HH LPL+G P RR P + G A Sbjct: 316 HHHLLPLRGSRPPRRRPPGEVGPA 245
>LOC_Os03g32850:12003.t02873:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4101 Score = 32.2 bits (64), Expect = 5.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 / +1 Query: 739 CSGVCVCFSGESKG*RLKRVGIRNA 813 C GV F+G+ KG R+++ G+ NA Sbjct: 2389 CGGVAAVFAGDGKGHRVRKNGVPNA 2463
>LOC_Os03g06770:12003.t00543:unspliced-genomic hypothetical protein| Length = 1178 Score = 32.2 bits (64), Expect = 5.8 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 / +3 Query: 817 LMRS*FLPSSVFIPCSHQKNTHTHRNNIHTPT 722 L+R L ++F +H+KNTHT + HTPT Sbjct: 738 LLR*FSLKHTIFSFYNHKKNTHTTTPHAHTPT 833
>LOC_Os02g09410:12002.t00788:unspliced-genomic cytochrome P450 71D7, putative, expressed| Length = 1663 Score = 32.2 bits (64), Expect = 5.8 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +1 / +3 Query: 481 VRRRLEGQAHHRQLPLQG 534 +RRRL G HHRQ P QG Sbjct: 546 LRRRLHGARHHRQPPAQG 599
>LOC_Os02g04670:12002.t00365:unspliced-genomic glucan endo-1,3-beta-glucosidase 6 precursor, putative, expressed| Length = 5250 Score = 32.2 bits (64), Expect = 5.8 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = -2 / -3 Query: 846 TTAGKQSTSCSCVPNSYPLQSSSLALTRKTHTHTGTIYTRLHCGH 712 TT S +CVP P+ S+ A +HT T L C H Sbjct: 1249 TTVSGASGWLACVPQFAPIASTPTAAAAASHTQHATAAAALPCHH 1115
>LOC_Os10g16580:12010.t01223:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1372 Score = 31.8 bits (63), Expect = 7.9 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 / +3 Query: 799 LPSSVFIPCSHQKNTHTHRNNIHTPTLRPL 710 LPS ++ PCS ++ + H P LRPL Sbjct: 930 LPSGMWAPCSPRQGMRCSTSTPHLPPLRPL 1019
>LOC_Os08g31080:12008.t02857:unspliced-genomic expressed protein| Length = 1610 Score = 31.8 bits (63), Expect = 7.9 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 132 ECGARVEGSGVGSNRWW 82 E G R EGSGVG +WW Sbjct: 136 EDGRRREGSGVGGRQWW 86
>LOC_Os06g48330:12006.t04519:unspliced-genomic protein binding protein, putative, expressed| Length = 2938 Score = 31.8 bits (63), Expect = 7.9 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = -2 / +1 Query: 129 CGARVEGSGVGSNRWWARGRGV*DRSPGNERWR 31 CG G G + RW RG G G+ RWR Sbjct: 493 CGPGWRGRGRSATRWRGRGPGSGRSGRGSRRWR 591
>LOC_Os04g43390:12004.t03883:unspliced-genomic beta-mannosidase 4, putative, expressed| Length = 8504 Score = 31.8 bits (63), Expect = 7.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 / +1 Query: 849 GTTAGKQSTSCSCVPNSYPLQSSSLALTRKTHTHTGTIYTR 727 G+ +G++STS +C P + SSL T + T + TR Sbjct: 6349 GSGSGRRSTSRTCPPGTSTFWESSLRTTAPRRSATAAVATR 6471
>LOC_Os03g61050:12003.t05338:unspliced-genomic DEX1, putative, expressed| Length = 8105 Score = 31.8 bits (63), Expect = 7.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 / +2 Query: 487 RRLEGQAHHRQLPLQGRVPAHRRHPAQAGQAL 582 RR+ HR+L + P HRR P + G+AL Sbjct: 62 RRVSDHFPHRRLHAEISFPLHRRRPPRRGEAL 157
>LOC_Os03g03760:12003.t00258:unspliced-genomic myb-like DNA-binding domain, SHAQKYF class family protein, expressed| Length = 4979 Score = 31.8 bits (63), Expect = 7.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 / +2 Query: 816 SCVPNSYPLQSSSLALTRKTHTHTGTIYTRLHC 718 +C P +P S SL+L ++ H + T + R HC Sbjct: 3638 ACFPFLFPFSSISLSLLQQWHEY*RTRHARTHC 3736
>LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 3132 Score = 31.8 bits (63), Expect = 7.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 / +1 Query: 459 PWMSRSGALTTW*TRRGAVTRTRLPT 382 PW RSG W TR G RT P+ Sbjct: 1384 PWPGRSGCRRRWTTRAGRAARTARPS 1461
>LOC_Os01g66100:12001.t05971:unspliced-genomic gibberellin 20 oxidase 2, putative, expressed| Length = 3123 Score = 31.8 bits (63), Expect = 7.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +2 / +1 Query: 5 RPHSLVYPFLHLSLPGLLSYTPLPRAH 85 R H+ P LHL P L PLPR H Sbjct: 2662 RRHAAALPGLHLGRPHALHAAPLPRRH 2742
>LOC_Os01g16930:12001.t01542:unspliced-genomic presenilin, putative, expressed| Length = 1605 Score = 31.8 bits (63), Expect = 7.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 / +3 Query: 481 VRRRLEGQAHHRQLPLQGRVPAHRRHPAQA 570 +R L G+ H R+ P R PA RRH A+A Sbjct: 273 LRPLLHGRRHRRRRPPPPRRPARRRHRARA 362
>LOC_Os04g20164:12004.t01755:unspliced-genomic amine oxidase precursor, putative, expressed| Length = 7590 Score = 25.8 bits (50), Expect(2) = 9.0 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -2 / +1 Query: 87 WWARGRGV*DRSPGN 43 WW RGRG R P + Sbjct: 1078 WWCRGRGCRTRRPAS 1122 Score = 22.6 bits (43), Expect(2) = 9.0 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -3 / +1 Query: 170 SLPLAAGGRGSDWNVG 123 S+ AGG GS W+ G Sbjct: 973 SMEPPAGGPGSSWSTG 1020
>LOC_Os08g40510:12008.t03781:unspliced-genomic KID-containing protein, putative, expressed| Length = 1764 Score = 27.6 bits (54), Expect(2) = 9.2 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 / +3 Query: 481 VRRRLEGQAHHRQLPLQGRVPAHRRHPAQAGQAL 582 +RRR + RQ P + VPA PA+A + L Sbjct: 1335 LRRRAVQRQRRRQPPARADVPAAEAEPARAEEQL 1436 Score = 24.9 bits (48), Expect(2) = 9.2 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +3 / +2 Query: 66 PLSRAPTTCSTRRRS 110 PLS PTT S+RRR+ Sbjct: 1280 PLSSPPTTPSSRRRT 1324
>LOC_Os02g21600:12002.t01949:unspliced-genomic hypothetical protein| Length = 3668 Score = 28.1 bits (55), Expect(2) = 9.6 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -2 / -1 Query: 819 CSCVPNSYPLQSSSLALTRKTHTHTGTIYTRL 724 CS VPN+ S SL T H TIY +L Sbjct: 1184 CSAVPNTAVSWSRSLRGTNCPHLSFSTIYCKL 1089 Score = 25.4 bits (49), Expect(2) = 9.6 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 / -1 Query: 555 STVSWNSTLKGKLAVMRLP 499 STVS N TL GK + R+P Sbjct: 596 STVSHNLTLMGKRVLTRVP 540 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 245,605,051 Number of extensions: 3457148 Number of successful extensions: 24314 Number of sequences better than 10.0: 47 Length of query: 325 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 275 Effective length of database: 52,799,986 Effective search space: 14519996150 Effective search space used: 14519996150 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
