ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61b22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 Score = 1362 bits (687), Expect = 0.0 Identities = 687/687 (100%) Strand = Plus / Plus Query: 126 tcagcgtcgagcccccggttcctgggcgactccggccgcgtcgggctcgccaagtccacc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcagcgtcgagcccccggttcctgggcgactccggccgcgtcgggctcgccaagtccacc 60 Query: 186 cgccgcgacgtcgccgtccaggccaaggggtcctggctccccggcctccagtcccctgcc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgccgcgacgtcgccgtccaggccaaggggtcctggctccccggcctccagtcccctgcc 120 Query: 246 tacctcgacggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggac 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tacctcgacggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggac 180 Query: 306 ccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctg 240 Query: 366 ggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctgctgaacgcgccc 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctgctgaacgcgccc 300 Query: 426 gagtggtacgacgccggcaaggagacctacttcgcctcctcctccacgctcttcgtcatc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gagtggtacgacgccggcaaggagacctacttcgcctcctcctccacgctcttcgtcatc 360 Query: 486 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccgggc 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccgggc 420 Query: 546 tccgtcaaccaggaccccatcttcaagagctacagcctcccgccccacgagtgcggctac 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tccgtcaaccaggaccccatcttcaagagctacagcctcccgccccacgagtgcggctac 480 Query: 606 cccggcagcgtcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggag 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 cccggcagcgtcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggag 540 Query: 666 ctcgccaacgggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtg 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ctcgccaacgggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtg 600 Query: 726 accgggaaggggccgttcgagaacctgcagcagcacctggccgacccatggcacaacacc 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 accgggaaggggccgttcgagaacctgcagcagcacctggccgacccatggcacaacacc 660 Query: 786 atcatccagaccatctccggccaataa 812 ||||||||||||||||||||||||||| Sbjct: 661 atcatccagaccatctccggccaataa 687
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 939 nt] Length = 939 Score = 942 bits (475), Expect = 0.0 Identities = 536/552 (97%), Gaps = 12/552 (2%) Strand = Plus / Plus Query: 503 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 449 Query: 563 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaa 622 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 450 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagagtcttcaa 509 Query: 623 ccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagact 682 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 510 ccccctcaacttcgccccc---ctcgagaacaaggagaaggagctcgccaacgggagact 566 Query: 683 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgtt 742 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 567 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgcacgggaaggggccgtt 626 Query: 743 cgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccagaccatctc 802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 cgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccagaccatctc 686 Query: 803 cggccaataaatccgtcgatttcaccgaccaaggaggtttcaggtggtctgaattattat 862 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 687 cggccaataaatccgtcgatttcaccgaccaaggaggttt-aggtggtctgaattattat 745 Query: 863 tttggggtgctgaggatgtacaaagtgtggaggagtaggtggcagtgcaaaaacgtgttg 922 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tttggggtgctgaggatgtacaaagtgtggaggagtaggtggcagtgcaaaaacgtgttg 805 Query: 923 taatcttaaagttccggtggtgaaactttgtccttgtggattcgcccatggcttccgacg 982 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 taat------gttccggtggtgaaactttgtccttgtggattcgcccatggcttccgacg 859 Query: 983 gaggctgtacttgtaatat-cacccatgcgtgttattttaaaacatggcaaaacatacta 1041 || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 860 ga-gctgtacttgtaatatatacccatgcgtgttattttaaaacatggcaaaacatacta 918 Query: 1042 ctagtttgaagc 1053 |||||||||||| Sbjct: 919 ctagtttgaagc 930 Score = 533 bits (269), Expect = e-148 Identities = 319/329 (96%), Gaps = 5/329 (1%) Strand = Plus / Plus Query: 157 ccggccgcgtcgggctcgccaag-tccacccgccgcgacgtcgccgtccaggccaagggg 215 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 43 ccggccgcgtcgggctcgccaaggtccacccgccgcgacgtcgccgtccaggccaagggg 102 Query: 216 tcctggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaat 275 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 103 tcctggctccccggcctccagtcccctgcctacctagacggcagtctggagggtgacaat 162 Query: 276 ggttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcg 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 ggttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcg 222 Query: 336 gagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtg 395 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gacgtggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtg 282 Query: 396 ctgaccaaggcggggctgctgaacgcgcccgagtgg-tacgac-gcc-ggcaaggagacc 452 |||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||| Sbjct: 283 ctgaccaaggcggggctgatgaacgcgcccgagtggttacgactgccaggcaaggagacc 342 Query: 453 tacttcgcctcctcctccac-gctcttcg 480 |||||||||||||||||||| |||||||| Sbjct: 343 tacttcgcctcctcctccactgctcttcg 371
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 666 bits (336), Expect = 0.0 Identities = 528/592 (89%) Strand = Plus / Plus Query: 205 aggccaaggggtcctggctccccggcctccagtcccctgcctacctcgacggcagtctgg 264 ||||||||||| |||||||||||||||| || || |||||||| ||||||| || Sbjct: 205 aggccaagggggagtggctccccggcctcccttctcccacctacctcaacggcagcttgc 264 Query: 265 cgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctgcggtggt 324 | || || || || || |||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 265 caggcgataacgggttcgacccgttgggtctggcggaggacccggagaacctgcggtggt 324 Query: 325 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctga 384 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 325 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgc 384 Query: 385 tcccggaggtgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggca 444 | || ||||||||||| ||| ||| || | ||||||| |||||||||||||||||| Sbjct: 385 tgcctgaggtgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggca 444 Query: 445 aggagacctacttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccact 504 ||| ||||||||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 445 aggccacctacttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccact 504 Query: 505 acgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggacccca 564 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 505 acgtggagatccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggacccca 564 Query: 565 tcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaacc 624 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 565 tcttcaagagctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaacc 624 Query: 625 ccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactgg 684 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 625 ccctcaacttcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctgg 684 Query: 685 ccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcg 744 | |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 685 cgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcg 744 Query: 745 agaacctgcagcagcacctggccgacccatggcacaacaccatcatccagac 796 | ||||||| |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 745 acaacctgctgcagcacctgtctgacccgtggcacaacaccatcatccagac 796
>ref|NM_001068419.1| Oryza sativa (japonica cultivar-group) Os08g0435900 (Os08g0435900) mRNA, complete cds Length = 1063 Score = 662 bits (334), Expect = 0.0 Identities = 517/578 (89%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 203 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 262 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 263 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 322 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 323 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 382 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 383 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 442 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 443 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 502 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 503 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 562 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 622 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 623 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 682 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 683 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 742 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 743 cacctgtctgacccgtggcacaacaccatcatccagac 780
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 662 bits (334), Expect = 0.0 Identities = 517/578 (89%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 754 cacctgtctgacccgtggcacaacaccatcatccagac 791
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 662 bits (334), Expect = 0.0 Identities = 517/578 (89%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 211 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 270 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 330 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 331 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 390 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 391 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 450 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 451 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 510 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 511 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 570 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 630 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 631 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 690 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 691 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 750 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 751 cacctgtctgacccgtggcacaacaccatcatccagac 788
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 662 bits (334), Expect = 0.0 Identities = 517/578 (89%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 754 cacctgtctgacccgtggcacaacaccatcatccagac 791
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 654 bits (330), Expect = 0.0 Identities = 516/578 (89%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 212 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 271 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 272 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcgggg 331 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 332 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 391 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 392 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 451 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 452 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 511 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 512 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 571 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 631 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 632 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 691 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 692 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 751 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 752 cacctgtctgacccgtggcacaacaccatcatccagac 789
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 638 bits (322), Expect = e-179 Identities = 514/578 (88%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 215 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 274 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 275 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 334 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 335 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 394 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 395 acgaagatcgggttgatcgacgcgccacagtggtacgacaccggcaaggccacctacttc 454 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| ||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 455 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcccgttccactacgtggagatccgg 514 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 515 cggtggcaggacatcaaggaccctggctgcgtcaaccaggaccccatcttcaagagctac 574 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 634 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 635 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 694 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 695 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 754 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 755 cacctgtctgacccgtggcacaacaccatcatccagac 792
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 632 bits (319), Expect = e-178 Identities = 516/579 (89%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 190 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 249 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 250 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 309 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 310 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 369 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 370 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 429 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 430 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 489 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 490 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 549 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaa-ccccctcaacttcgc 637 ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 550 agcctcccgccgcacgagtgcggcta-cccggcagcgtcttcaacccccctcaacttcga 608 Query: 638 ccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgtt 697 |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 609 gcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgtt 668 Query: 698 cctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagca 757 | |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||| Sbjct: 669 cttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgca 728 Query: 758 gcacctggccgacccatggcacaacaccatcatccagac 796 ||||||| | ||||| ||||||||||||||||||||||| Sbjct: 729 gcacctgtctgacccgtggcacaacaccatcatccagac 767
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 607 bits (306), Expect = e-170 Identities = 510/578 (88%) Strand = Plus / Plus Query: 219 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 278 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 177 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 236 Query: 279 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 338 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 237 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 296 Query: 339 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 398 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 297 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 356 Query: 399 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 458 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 357 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 416 Query: 459 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 518 || || || |||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 417 gcgtcgtcgaacacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgc 476 Query: 519 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 578 | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 477 cagtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 536 Query: 579 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 638 || ||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 agactccccagcgacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 596 Query: 639 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 698 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 597 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 656 Query: 699 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 758 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 657 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 716 Query: 759 cacctggccgacccatggcacaacaccatcatccagac 796 |||||| | ||||| ||||||||||||||||||||||| Sbjct: 717 cacctgtctgacccgtggcacaacaccatcatccagac 754
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 513 bits (259), Expect = e-142 Identities = 352/383 (91%) Strand = Plus / Minus Query: 294 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 353 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21165033 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 21164974 Query: 354 tgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctg 413 |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||| || Sbjct: 21164973 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgacgaagatcgggttg 21164914 Query: 414 ctgaacgcgcccgagtggtacgacgccggcaaggagacctacttcgcctcctcctccacg 473 | ||||||| ||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 21164913 atcgacgcgccgcagtggtacgacgccggcaaggccacctacttcgcgtcgtcgtcgacg 21164854 Query: 474 ctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatc 533 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 21164853 ctgttcgtcatcgagttcatcctgttccactacgtggagatccggcggtggcaggacatc 21164794 Query: 534 aagaacccgggctccgtcaaccaggaccccatcttcaagagctacagcctcccgccccac 593 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 21164793 aagaaccctggctgcgtcaaccaggaccccatcttcaagagctacagcctcccgccgcac 21164734 Query: 594 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcccccaccctcgagaac 653 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 21164733 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgagcccaccctcgaggcc 21164674 Query: 654 aaggagaaggagctcgccaacgg 676 ||||||||||||||||||||||| Sbjct: 21164673 aaggagaaggagctcgccaacgg 21164651 Score = 147 bits (74), Expect = 1e-31 Identities = 110/122 (90%) Strand = Plus / Minus Query: 675 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 734 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 21164559 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 21164500 Query: 735 gggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccag 794 ||||| ||||| ||||||| |||||||||| | ||||| ||||||||||||||||||||| Sbjct: 21164499 gggcccttcgacaacctgctgcagcacctgtctgacccgtggcacaacaccatcatccag 21164440 Query: 795 ac 796 || Sbjct: 21164439 ac 21164438
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 513 bits (259), Expect = e-142 Identities = 352/383 (91%) Strand = Plus / Minus Query: 294 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 353 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136243 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 136184 Query: 354 tgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctg 413 |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||| || Sbjct: 136183 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgacgaagatcgggttg 136124 Query: 414 ctgaacgcgcccgagtggtacgacgccggcaaggagacctacttcgcctcctcctccacg 473 | ||||||| ||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 136123 atcgacgcgccgcagtggtacgacgccggcaaggccacctacttcgcgtcgtcgtcgacg 136064 Query: 474 ctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatc 533 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 136063 ctgttcgtcatcgagttcatcctgttccactacgtggagatccggcggtggcaggacatc 136004 Query: 534 aagaacccgggctccgtcaaccaggaccccatcttcaagagctacagcctcccgccccac 593 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136003 aagaaccctggctgcgtcaaccaggaccccatcttcaagagctacagcctcccgccgcac 135944 Query: 594 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcccccaccctcgagaac 653 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 135943 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgagcccaccctcgaggcc 135884 Query: 654 aaggagaaggagctcgccaacgg 676 ||||||||||||||||||||||| Sbjct: 135883 aaggagaaggagctcgccaacgg 135861 Score = 147 bits (74), Expect = 1e-31 Identities = 110/122 (90%) Strand = Plus / Minus Query: 675 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 734 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 135769 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 135710 Query: 735 gggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccag 794 ||||| ||||| ||||||| |||||||||| | ||||| ||||||||||||||||||||| Sbjct: 135709 gggcccttcgacaacctgctgcagcacctgtctgacccgtggcacaacaccatcatccag 135650 Query: 795 ac 796 || Sbjct: 135649 ac 135648
>ref|NM_001069810.1| Oryza sativa (japonica cultivar-group) Os09g0439500 (Os09g0439500) mRNA, complete cds Length = 918 Score = 103 bits (52), Expect = 1e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 345 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 404 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 405 gggatcctggtcccggaggtgctg 428
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 103 bits (52), Expect = 1e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 16234223 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 16234282 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 16234283 gggatcctggtcccggaggtgctg 16234306
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 103 bits (52), Expect = 1e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 50739 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 50798 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 50799 gggatcctggtcccggaggtgctg 50822
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 103 bits (52), Expect = 1e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 138824 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 138883 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 138884 gggatcctggtcccggaggtgctg 138907
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 103 bits (52), Expect = 1e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 346 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 405 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 406 gggatcctggtcccggaggtgctg 429
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) Length = 1013 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 321 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 380 |||| ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 269 tggtacgtccaggcggagctagtgaacgggaggtgggcgatgctgggcgtggcggggatg 328 Query: 381 ctgatcccggaggtgctgacca 402 || |||||||| ||||| |||| Sbjct: 329 cttatcccggaagtgctaacca 350 Score = 87.7 bits (44), Expect = 8e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 616 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 675 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 564 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 623 Query: 676 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 735 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 624 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 683 Query: 736 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 787 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 684 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 735
>emb|CT829539.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN073D13, full insert sequence Length = 1035 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 315 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 374 ||||||||||||| ||||||||||||| || || | |||||||||||||||| || |||| Sbjct: 335 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggcggcg 394 Query: 375 gggatgctgatcccggaggtgctg 398 ||||| ||| |||||||||||||| Sbjct: 395 gggatcctggtcccggaggtgctg 418
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) (partial) Length = 968 Score = 91.7 bits (46), Expect = 5e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 321 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 380 |||| ||| ||||||||||| ||||||||| | |||||||||||||| |||||||||||| Sbjct: 246 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 305 Query: 381 ctgatcccggaggtgctgacca 402 || |||||||| ||||| |||| Sbjct: 306 cttatcccggaagtgctaacca 327 Score = 87.7 bits (44), Expect = 8e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 616 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 675 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 541 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 600 Query: 676 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 735 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 601 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 660 Query: 736 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 787 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 661 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 712
>emb|AM265630.1| Solanum tuberosum mRNA for chlorophyll a/b binding protein (cab1 gene) Length = 1035 Score = 85.7 bits (43), Expect = 3e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 483 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccg 542 |||||||||||| | |||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 464 atcgagttcatcttgttccactacgtcgagatcagaaggtggcaagacattaagaaccca 523 Query: 543 ggctccgtcaaccaggaccccatcttcaagagctacagc 581 || |||||||| ||||| |||||||||||||||||| Sbjct: 524 ggaagtgtcaaccaagaccctatcttcaagagctacagc 562 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 768 gacccatggcacaacaccatcatcca 793 |||||||||||||||||||||||||| Sbjct: 749 gacccatggcacaacaccatcatcca 774
>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein Length = 726 Score = 85.7 bits (43), Expect = 3e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 468 tccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcag 527 ||||| || ||||| |||||||||||| | |||||||||||||||||| | ||||||| Sbjct: 262 tccaccctgttcgtgatcgagttcatcttgttccactacgtcgagatcagaaggtggcaa 321 Query: 528 gacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctacagc 581 |||||||||||||| || || ||||| | |||||||||||||| ||||||| Sbjct: 322 gacatcaagaacccaggaagtgttaaccaagnccccatcttcaagaactacagc 375 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 766 ccgacccatggcacaacaccat 787 |||||||||||||||||||||| Sbjct: 560 ccgacccatggcacaacaccat 581
>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein type 4 Length = 819 Score = 85.7 bits (43), Expect = 3e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 321 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 380 |||| ||| ||||||||||| ||||||||| | |||||||||||||| |||||||||||| Sbjct: 277 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 336 Query: 381 ctgatcccggaggtgctgacca 402 | |||||||| ||||| |||| Sbjct: 337 cntatcccggaagtgctaacca 358 Score = 71.9 bits (36), Expect = 5e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 616 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 675 |||||||||| ||||||||| |||| || | ||| ||||||||||||||| ||||| | Sbjct: 572 tcttcaacccgctcaacttctccccatccatggaggccaaggagaaggagcttgccaatg 631 Query: 676 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 735 |||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 632 ggaggttggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 691 Query: 736 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 787 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 692 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 743
>ref|NM_001066625.1| Oryza sativa (japonica cultivar-group) Os07g0577600 (Os07g0577600) mRNA, complete cds Length = 1080 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 311 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 370 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 371 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 413
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 23304695 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 23304754 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 23304755 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 23304797
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 59953 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 60012 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 60013 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 60055
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 311 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 370 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 371 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 413
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 327 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 386 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 387 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 429
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 293 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 352 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 353 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 395
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 356 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 398
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 290 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 349 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 350 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 392
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 291 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 350 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 351 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 393
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 478 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 537 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 538 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 580
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 77.8 bits (39), Expect = 7e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 302 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 361 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 300 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 359 Query: 362 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 360 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 402
>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene Length = 1393 Score = 77.8 bits (39), Expect = 7e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 483 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccg 542 |||||||||||| | |||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 805 atcgagttcatcttgttccactacgtcgagatcagaaggtggcaagacattaagaaccca 864 Query: 543 ggctccgtcaaccaggaccccatcttcaagagctacagc 581 || |||||||| ||||| |||||||||| ||||||| Sbjct: 865 ggaagtgtcaaccaagaccctatcttcaagaactacagc 903 Score = 77.8 bits (39), Expect = 7e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 711 gtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgac 770 ||||||||||| ||||| |||||||| || || || ||||| | ||||||||| | ||| Sbjct: 1110 gtgcagcacaatgtgactgggaagggaccttttgacaaccttctgcagcacctctctgac 1169 Query: 771 ccatggcacaacaccatcatcca 793 ||||||||||||||||||||||| Sbjct: 1170 ccatggcacaacaccatcatcca 1192
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 75.8 bits (38), Expect = 3e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 303 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 362 ||||||||| | |||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 321 gacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 380 Query: 363 ctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 ||||| | |||||| || | ||||| ||| ||||||||||| Sbjct: 381 ctgggcgcggcgggcatcttcatcccagagctgctgaccaag 422
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 75.8 bits (38), Expect = 3e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 303 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 362 ||||||||| |||||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 444 gacccggagagcctgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 503 Query: 363 ctgggggtggcggggatgctgatcccggaggtgctgaccaag 404 || || | |||||| || | ||||||||| | ||||||||| Sbjct: 504 ctcggcgcggcgggcatcttcatcccggagtttctgaccaag 545
>emb|CT833186.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN043H22, full insert sequence Length = 918 Score = 73.8 bits (37), Expect = 1e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 316 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 375 |||||||| ||||||||||||||||||| || | ||||||||||||||||| | ||||| Sbjct: 183 tgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatgctgggcgcggcgg 242 Query: 376 ggatgctgatcccggaggtgctgaccaag 404 | || | ||||||||| | ||||||||| Sbjct: 243 gcatcttcatcccggagttcctgaccaag 271
>emb|CT833185.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA039A18, full insert sequence Length = 1069 Score = 73.8 bits (37), Expect = 1e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 316 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 375 |||||||| ||||||||||||||||||| || | ||||||||||||||||| | ||||| Sbjct: 332 tgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatgctgggcgcggcgg 391 Query: 376 ggatgctgatcccggaggtgctgaccaag 404 | || | ||||||||| | ||||||||| Sbjct: 392 gcatcttcatcccggagttcctgaccaag 420
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 73.8 bits (37), Expect = 1e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 316 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 375 |||||||| ||||||||||||||||||| || | |||||||||||||| || | ||||| Sbjct: 290 tgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatgcttggagcggcgg 349 Query: 376 ggatgctgatcccggaggtgctgaccaag 404 |||| | ||||||||| | ||||||||| Sbjct: 350 ggatcttcatcccggagctcctgaccaag 378
>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein (cab11 gene) Length = 1062 Score = 71.9 bits (36), Expect = 5e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 714 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 773 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 ||| ||||| ||||| || |||||||| || || ||||| | |||||| || | ||||| Sbjct: 774 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagcatctatcagaccc 833 Query: 773 atggcacaacaccatcatccagac 796 ||||||||||||||| || ||||| Sbjct: 834 atggcacaacaccattattcagac 857 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 320 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 |||||| ||||| || |||||||||||||| || ||||| ||||| |||||||| Sbjct: 381 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 434 Score = 48.1 bits (24), Expect = 0.066 Identities = 48/56 (85%) Strand = Plus / Plus Query: 486 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 541 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 547 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 602
>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds Length = 1008 Score = 71.9 bits (36), Expect = 5e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 630 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 689 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 ||| ||||| ||||| || |||||||| || || ||||| | |||||| || | ||||| Sbjct: 690 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagcatctatcagaccc 749 Query: 773 atggcacaacaccatcatccagac 796 ||||||||||||||| || ||||| Sbjct: 750 atggcacaacaccattattcagac 773 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 320 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 |||||| ||||| || |||||||||||||| || ||||| ||||| |||||||| Sbjct: 297 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 350 Score = 48.1 bits (24), Expect = 0.066 Identities = 48/56 (85%) Strand = Plus / Plus Query: 486 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 541 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 463 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 518
>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA, partial cds; nuclear gene for chloroplast product Length = 476 Score = 65.9 bits (33), Expect = 3e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 |||||| ||||| || || ||||||||| | || ||| |||| ||||||||||| | || Sbjct: 133 caaggaaaaggaacttgctaacgggagattagcaatgttggcattcctggggtttattgt 192 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||||||||| || || ||||| || || ||||| ||||||| | | ||||| Sbjct: 193 tcaacacaacgtgactggaaaagggccatttgacaacctcttgcagcacatctcagaccc 252 Query: 773 atggcacaacaccatcatcca 793 ||||||||||||||||||||| Sbjct: 253 atggcacaacaccatcatcca 273
>emb|X57707.1|LECAB12 L.esculentum DNA for Cab12 gene Length = 1493 Score = 61.9 bits (31), Expect = 4e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 258 agtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctg 317 ||||| |||||||||||||||||||| || ||| || |||||||| |||||| || || Sbjct: 608 agtcttgcgggtgacaatggttttgatccattgggactcgcggaggatccggagaacttg 667 Query: 318 cggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgggg 377 | ||||| || ||||| ||||| |||||||| || ||||| ||| |||| || || ||| Sbjct: 668 agatggtttgttcaggctgagctagtgaacggtcgatgggctatgttgggtgttgcaggg 727 Query: 378 atg 380 ||| Sbjct: 728 atg 730
>dbj|AK230388.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-06-L05 Length = 2477 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 1723 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 1782 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 1783 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 1842 Query: 374 ggggatgct 382 |||||||| Sbjct: 1843 tgggatgct 1851 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 1946 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 2005 Query: 537 aaccc 541 ||||| Sbjct: 2006 aaccc 2010 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 2122 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 2181 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 2182 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 2241 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 2242 atggcacaacac 2253
>dbj|AK230315.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-13-B19 Length = 2226 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Minus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 801 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 742 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 741 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 682 Query: 374 ggggatgct 382 |||||||| Sbjct: 681 tgggatgct 673 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Minus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 578 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 519 Query: 537 aaccc 541 ||||| Sbjct: 518 aaccc 514 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Minus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 402 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 343 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 342 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 283 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 282 atggcacaacac 271
>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding (CAB4) mRNA, complete cds Length = 1266 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 464 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 523 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 524 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 583 Query: 374 ggggatgct 382 |||||||| Sbjct: 584 tgggatgct 592 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 687 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 746 Query: 537 aaccc 541 ||||| Sbjct: 747 aaccc 751 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 863 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 922 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 923 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 982 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 983 atggcacaacac 994
>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 891 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 204 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 263 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 264 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 323 Query: 374 ggggatgct 382 |||||||| Sbjct: 324 tgggatgct 332 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 427 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 486 Query: 537 aaccc 541 ||||| Sbjct: 487 aaccc 491 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 603 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 662 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 663 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 722 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 723 atggcacaacac 734
>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 1055 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 304 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 363 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 364 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 423 Query: 374 ggggatgct 382 |||||||| Sbjct: 424 tgggatgct 432 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 527 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 586 Query: 537 aaccc 541 ||||| Sbjct: 587 aaccc 591 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 703 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 762 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 763 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 822 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 823 atggcacaacac 834
>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence Length = 1267 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 465 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 524 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 525 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 584 Query: 374 ggggatgct 382 |||||||| Sbjct: 585 tgggatgct 593 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 688 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 747 Query: 537 aaccc 541 ||||| Sbjct: 748 aaccc 752 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 864 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 923 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 924 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 983 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 984 atggcacaacac 995
>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 294 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 353 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 354 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 413 Query: 374 ggggatgct 382 |||||||| Sbjct: 414 tgggatgct 422 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 517 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 576 Query: 537 aaccc 541 ||||| Sbjct: 577 aaccc 581 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 693 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 752 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 753 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 812 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 813 atggcacaacac 824
>emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 291 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 350 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 351 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 410 Query: 374 ggggatgct 382 |||||||| Sbjct: 411 tgggatgct 419 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 514 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 573 Query: 537 aaccc 541 ||||| Sbjct: 574 aaccc 578
>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 278 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 337 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 338 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 397 Query: 374 ggggatgct 382 |||||||| Sbjct: 398 tgggatgct 406 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 501 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 560 Query: 537 aaccc 541 ||||| Sbjct: 561 aaccc 565 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 677 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 736 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 737 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 796 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 797 atggcacaacac 808
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 58.0 bits (29), Expect = 7e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 316 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 375 |||||||| |||||||||||| || ||| || | ||||||||||||||||| | ||||| Sbjct: 281 tgcggtggaacgtgcaggcggatcttgtgcactgccggtgggcgatgctgggcgcggcgg 340 Query: 376 ggatgctgatcccggaggtgctgaccaag 404 | || | ||||||||| | ||||||||| Sbjct: 341 gcatcttcatcccggagttcctgaccaag 369
>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding protein (Cab4) mRNA, complete cds Length = 1050 Score = 58.0 bits (29), Expect = 7e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 254 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 313 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 274 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 333 Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 373 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 334 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 393 Query: 374 ggggatgct 382 |||||||| Sbjct: 394 tgggatgct 402 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 497 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 556 Query: 537 aaccc 541 ||||| Sbjct: 557 aaccc 561 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 673 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 732 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 733 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 792 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 793 atggcacaacac 804
>gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 498 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 359 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 402 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 616 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 673 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 521 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 359 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 402 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 616 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 673 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 54.0 bits (27), Expect = 0.001 Identities = 102/127 (80%) Strand = Plus / Minus Query: 256 gcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacc 315 ||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| || Sbjct: 7689 gcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaact 7630 Query: 316 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 375 || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || | Sbjct: 7629 tgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgctg 7570 Query: 376 ggatgct 382 ||||||| Sbjct: 7569 ggatgct 7563 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Minus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 7389 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 7330 Query: 537 aaccc 541 ||||| Sbjct: 7329 aaccc 7325
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 52.0 bits (26), Expect = 0.004 Identities = 32/34 (94%) Strand = Plus / Plus Query: 414 ctgaacgcgcccgagtggtacgacgccggcaagg 447 ||||||| ||| |||||||||||||||||||||| Sbjct: 835 ctgaacgtgcctgagtggtacgacgccggcaagg 868
>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete cds Length = 715 Score = 50.1 bits (25), Expect = 0.017 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 536 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 144 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 203 Query: 537 aaccc 541 ||||| Sbjct: 204 aaccc 208 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 320 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 379 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 380 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 439 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 440 atggcacaacac 451
>dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-25I9, complete sequence Length = 167067 Score = 50.1 bits (25), Expect = 0.017 Identities = 28/29 (96%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||||||||| ||||| Sbjct: 159312 cacacacacacgcgcgcactctctctctc 159340
>gb|AC186756.1| Musa acuminata clone MA4_112I10, complete sequence Length = 102441 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 346 acgggcggtgggcgatgctggggg 369 |||||||||||||||||||||||| Sbjct: 60758 acgggcggtgggcgatgctggggg 60781
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 48.1 bits (24), Expect = 0.066 Identities = 33/36 (91%) Strand = Plus / Plus Query: 314 cctgcggtggttcgtgcaggcggagctggtgaacgg 349 ||||||||||| ||||||||| ||||||||| |||| Sbjct: 198 cctgcggtggtacgtgcaggctgagctggtgcacgg 233
>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence Length = 405 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 252 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 311 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 312 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 371 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 372 atggcacaacac 383 Score = 46.1 bits (23), Expect = 0.26 Identities = 50/59 (84%) Strand = Plus / Plus Query: 483 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 541 ||||||||||| | || || ||||| |||||| | |||||||| |||||||||||||| Sbjct: 82 atcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaagaaccc 140
>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 48.1 bits (24), Expect = 0.066 Identities = 105/132 (79%) Strand = Plus / Plus Query: 653 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 712 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 166 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 225 Query: 713 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 772 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 226 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 285 Query: 773 atggcacaacac 784 |||||||||||| Sbjct: 286 atggcacaacac 297 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 504 tacgtcgagatccggcggtggcaggacatcaagaaccc 541 ||||| |||||| | |||||||| |||||||||||||| Sbjct: 17 tacgttgagatcagacggtggcaagacatcaagaaccc 54
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Minus Query: 774 tggcacaacaccatcatccagacc 797 |||||||||||||||||||||||| Sbjct: 303 tggcacaacaccatcatccagacc 280
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 ccacgctcttcgtcatcgagttc 491 ||||||||||||||||||||||| Sbjct: 2948041 ccacgctcttcgtcatcgagttc 2948063
>gb|AC186746.1| Musa acuminata clone MA4_25J11, complete sequence Length = 105019 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 722 cgtgaccgggaaggggccgttcgagaacctg 752 ||||||||||||||||||| | ||||||||| Sbjct: 35728 cgtgaccgggaaggggccgctggagaacctg 35698
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.26 Identities = 32/35 (91%) Strand = Plus / Plus Query: 413 gctgaacgcgcccgagtggtacgacgccggcaagg 447 |||||||| ||| |||||||||||||| ||||||| Sbjct: 346 gctgaacgtgccggagtggtacgacgctggcaagg 380
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 ccaccacacacacacgcgcgcac 28 ||||||||||||||||||||||| Sbjct: 83489 ccaccacacacacacgcgcgcac 83511
>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V, complete sequence Length = 114056 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 879 tgtacaaagtgtggaggagtagg 901 ||||||||||||||||||||||| Sbjct: 37504 tgtacaaagtgtggaggagtagg 37526
>dbj|AB112468.1| Chlamydomonas reinhardtii iar1 gene for Iar1 InvA related Kinesin, exon 1-23, complete cds Length = 8900 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 gaggacccggaggacctgcggtg 322 ||||||||||||||||||||||| Sbjct: 6391 gaggacccggaggacctgcggtg 6413
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 cttcgtcatcgagttcatcctc 497 |||||||||||||||||||||| Sbjct: 2232065 cttcgtcatcgagttcatcctc 2232044
>emb|AM286690.1| Alcanivorax borkumensis SK2, complete genome Length = 3120143 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 atgctgggggtggcggggatgctgat 385 |||||||||||||||||| ||||||| Sbjct: 980075 atgctgggggtggcggggctgctgat 980100
>ref|XM_747159.1| Aspergillus fumigatus Af293 septin (Afu1g08850) partial mRNA Length = 1041 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 cacgctcttcgtcatcgagttc 491 |||||||||||||||||||||| Sbjct: 682 cacgctcttcgtcatcgagttc 661
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 ccacccgccgcgacgtcgccgtccag 206 |||||||||||| ||||||||||||| Sbjct: 301280 ccacccgccgcgtcgtcgccgtccag 301255
>emb|BX511037.9| Zebrafish DNA sequence from clone DKEY-66N24 in linkage group 1, complete sequence Length = 148544 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ccacacacacacgcgcgcactc 30 |||||||||||||||||||||| Sbjct: 23996 ccacacacacacgcgcgcactc 23975
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ccacccgccgcgacgtcgccg 201 ||||||||||||||||||||| Sbjct: 796379 ccacccgccgcgacgtcgccg 796399
>gb|AC007588.6| Drosophila melanogaster clone BACR30O03, complete sequence Length = 166221 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gtgtggaggagtaggtggcag 907 ||||||||||||||||||||| Sbjct: 60677 gtgtggaggagtaggtggcag 60657
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 cacacacacgcgcgcactctcactc 36 ||||||||||||||| ||||||||| Sbjct: 12822195 cacacacacgcgcgctctctcactc 12822219
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gtgtggaggagtaggtggcag 907 ||||||||||||||||||||| Sbjct: 10065048 gtgtggaggagtaggtggcag 10065028 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 18100588 cacacacacacgagcgcactctcgctctc 18100560
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 15556808 cacacacacacgcgcgcgctctcgctctc 15556780
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 tggcgctggcggaggacccgg 309 ||||||||||||||||||||| Sbjct: 3175879 tggcgctggcggaggacccgg 3175899
>ref|XR_015052.1| PREDICTED: Apis mellifera similar to CG32264-PA, isoform A (LOC408740), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 caccctcgagaacaaggagaa 661 ||||||||||||||||||||| Sbjct: 1119 caccctcgagaacaaggagaa 1139
>gb|AC187345.2| Trichinella spiralis BAC clone TS195-4H12 from chromosome unknown, complete sequence Length = 139002 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 caccacacacacacgcgcgca 27 ||||||||||||||||||||| Sbjct: 85421 caccacacacacacgcgcgca 85401
>gb|AC185979.3| Pan troglodytes BAC clone CH251-509G2 from chromosome unknown, complete sequence Length = 217358 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 68450 cacacacacacgcgcgcactc 68470
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 aggtgctgaccaaggcggggctgct 415 ||||||||||| ||||||||||||| Sbjct: 600685 aggtgctgaccgaggcggggctgct 600709
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 780 aacaccatcatccagaccatc 800 ||||||||||||||||||||| Sbjct: 631582 aacaccatcatccagaccatc 631602
>gb|AC102481.10| Mus musculus chromosome 1, clone RP24-427A3, complete sequence Length = 145973 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 accacacacacacgcgcgcac 28 ||||||||||||||||||||| Sbjct: 128644 accacacacacacgcgcgcac 128624
>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence Length = 186333 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 887 gtgtggaggagtaggtggcag 907 ||||||||||||||||||||| Sbjct: 11756 gtgtggaggagtaggtggcag 11776
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence Length = 236084 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcac 34 ||||||||||||||||| ||||||| Sbjct: 165129 cacacacacacgcgcgcgctctcac 165105
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ccggcggcgtcagcgtcgagc 137 ||||||||||||||||||||| Sbjct: 1184518 ccggcggcgtcagcgtcgagc 1184538
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||| ||||||||| ||||| Sbjct: 227781 cacacacacacgcacgcactctctctctc 227753
>ref|NM_001014641.1| Drosophila melanogaster GluClalpha CG7535-RC, transcript variant C (GluClalpha), mRNA Length = 2296 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>gb|AC112257.5| Mus musculus BAC clone RP23-43A18 from 16, complete sequence Length = 199117 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1013 gttattttaaaacatggcaaaacat 1037 |||||||||||||| |||||||||| Sbjct: 171049 gttattttaaaacaaggcaaaacat 171025
>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence Length = 205957 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ccaccacacacacacgcgcgc 26 ||||||||||||||||||||| Sbjct: 158812 ccaccacacacacacgcgcgc 158792
>gb|AC122926.2| Mus musculus BAC clone RP23-10E15 from 6, complete sequence Length = 193055 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 accacacacacacgcgcgcac 28 ||||||||||||||||||||| Sbjct: 128472 accacacacacacgcgcgcac 128492
>ref|NM_169873.1| Drosophila melanogaster GluClalpha CG7535-RB, transcript variant B (GluClalpha), mRNA Length = 2293 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>ref|NM_142570.2| Drosophila melanogaster GluClalpha CG7535-RA, transcript variant A (GluClalpha), mRNA Length = 4014 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>ref|NM_078835.2| Drosophila melanogaster kekkon-1 CG12283-RA (kek1), mRNA Length = 3595 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 cacacacacgcgcgcactctcactc 36 ||||||||||||||| ||||||||| Sbjct: 593 cacacacacgcgcgctctctcactc 569
>ref|NM_058026.3| Drosophila melanogaster ariadne 2 CG5709-RA (ari-2), mRNA Length = 3002 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 243 cacacacacacgagcgcactctcgctctc 215
>ref|NM_001038972.1| Drosophila melanogaster GluClalpha CG7535-RD, transcript variant D (GluClalpha), mRNA Length = 2293 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>gb|AC120768.5| Rattus norvegicus 7 BAC CH230-152B10 (Children's Hospital Oakland Research Institute) complete sequence Length = 221436 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||| ||||||||| ||||| Sbjct: 146993 cacacacacacgcacgcactctctctctc 147021
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 acacacacacgcgcgcactct 31 ||||||||||||||||||||| Sbjct: 177647 acacacacacgcgcgcactct 177627
>gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465 Length = 3993 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 938 ggtggtgaaactttgtccttg 958 ||||||||||||||||||||| Sbjct: 3785 ggtggtgaaactttgtccttg 3765
>emb|BX957244.15| Zebrafish DNA sequence from clone CH211-13C6 in linkage group 19, complete sequence Length = 162321 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 accacacacacacgcgcgcactctcactc 36 |||||||||||||||||| ||||| |||| Sbjct: 78953 accacacacacacgcgcgtactctgactc 78981
>gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188105 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 6 ccaccacacacacacgcgcgcactctcactctc 38 ||||||||||||||| | | ||||||||||||| Sbjct: 165458 ccaccacacacacacacactcactctcactctc 165426
>gb|AY119482.1| Drosophila melanogaster GH07166 full insert cDNA Length = 2928 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 151 cacacacacacgagcgcactctcgctctc 123
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 acttcgcctcctcctccacgc 474 ||||||||||||||||||||| Sbjct: 116484 acttcgcctcctcctccacgc 116464
>gb|AY095093.1| Drosophila melanogaster SD01674 full insert cDNA Length = 3618 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 cacacacacgcgcgcactctcactc 36 ||||||||||||||| ||||||||| Sbjct: 597 cacacacacgcgcgctctctcactc 573
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 acttcgcctcctcctccacgc 474 ||||||||||||||||||||| Sbjct: 15262785 acttcgcctcctcctccacgc 15262765
>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence Length = 201397 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 8256 cacacacacacgcgcgcactc 8236
>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone BACR02O12, complete sequence Length = 171594 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 33241 cacacacacacgagcgcactctcgctctc 33269
>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence Length = 213739 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 200163 cacacacacacgcgcgcactc 200183
>gb|AC161815.4| Mus musculus BAC clone RP23-353C21 from chromosome 16, complete sequence Length = 197690 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1013 gttattttaaaacatggcaaaacat 1037 |||||||||||||| |||||||||| Sbjct: 17052 gttattttaaaacaaggcaaaacat 17028
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 854 aattattattttggggtgctg 874 ||||||||||||||||||||| Sbjct: 97929 aattattattttggggtgctg 97909
>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR11M13, complete sequence Length = 190301 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 cacacacacgcgcgcactctcactc 36 ||||||||||||||| ||||||||| Sbjct: 12287 cacacacacgcgcgctctctcactc 12311
>gb|AC093095.1| Drosophila melanogaster, chromosome 2L, region 33F-34A, BAC clone BACR17H02, complete sequence Length = 167544 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 cacacacacgcgcgcactctcactc 36 ||||||||||||||| ||||||||| Sbjct: 120013 cacacacacgcgcgctctctcactc 120037
>emb|X91393.1|SADNAABAB S.antibioticus abaB gene Length = 1850 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggaggacccggaggacctg 317 ||||||||||||||||||||| Sbjct: 638 gcggaggacccggaggacctg 658
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 447 gagacctacttcgcctcctcctcca 471 ||||||| ||||||||||||||||| Sbjct: 323434 gagaccttcttcgcctcctcctcca 323410
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 155299 cacacacacacgcgcgcactc 155319
>emb|CR388085.9| Zebrafish DNA sequence from clone CH211-232D10, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||||| ||| ||||| Sbjct: 126001 cacacacacacgcgcgcacactctctctc 125973
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 166764 cacacacacacgcgcgctctctctctctc 166792
>emb|BX321873.12| Zebrafish DNA sequence from clone DKEY-151G22 in linkage group 20 Contains four novel genes and three CpG islands, complete sequence Length = 155649 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||| |||||||||||||||| ||||| Sbjct: 57975 cacacagacacgcgcgcactctctctctc 58003
>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4, complete sequence Length = 210697 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||| ||| ||||||||||||| Sbjct: 24208 cacacacacacacgcacactctcactctc 24236
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atgctgggggtggcggggatg 380 ||||||||||||||||||||| Sbjct: 308 atgctgggggtggcggggatg 328
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atgctgggggtggcggggatg 380 ||||||||||||||||||||| Sbjct: 646 atgctgggggtggcggggatg 666
>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence Length = 172400 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 938 ggtggtgaaactttgtccttg 958 ||||||||||||||||||||| Sbjct: 170083 ggtggtgaaactttgtccttg 170063
>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR07I18, complete sequence Length = 159413 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 154315 cacacacacacgcgcgcgctctcgctctc 154287
>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR48D03, complete sequence Length = 175917 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 40039 cacacacacacgcgcgcgctctcgctctc 40011
>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence Length = 214859 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 50548 cacacacacacgcgcgcactc 50568
>gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, complete cds, alternatively spliced Length = 9504 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gtgtggaggagtaggtggcag 907 ||||||||||||||||||||| Sbjct: 4324 gtgtggaggagtaggtggcag 4304
>gb|AY183051.1| Trifolium repens clone ca672 microsatellite sequence Length = 498 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||| ||||||||||| ||||| Sbjct: 198 cacacacacactcgcgcactctctctctc 226
>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence Length = 173842 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 938 ggtggtgaaactttgtccttg 958 ||||||||||||||||||||| Sbjct: 111563 ggtggtgaaactttgtccttg 111543
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22, complete sequence Length = 181178 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||||| ||| ||||| Sbjct: 104232 cacacacacacgcgcgcacactctctctc 104204
>gb|AC158686.2| Mus musculus 10 BAC RP24-74G10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 217129 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||||| | ||||||| Sbjct: 194866 cacacacacacgcgcgcacacgcactctc 194894
>dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911 Length = 3189 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 938 ggtggtgaaactttgtccttg 958 ||||||||||||||||||||| Sbjct: 2970 ggtggtgaaactttgtccttg 2950
>gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8, complete sequence Length = 117406 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 3779 cacacacacacgcgcgcactc 3759
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 184166 cacacacacacgcgcgcactc 184186
>gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, complete sequence Length = 228551 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 accacacacacacgcgcgcac 28 ||||||||||||||||||||| Sbjct: 161824 accacacacacacgcgcgcac 161844
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactc 30 ||||||||||||||||||||| Sbjct: 137525 cacacacacacgcgcgcactc 137545
>gb|AC004817.2|AC004817 Homo sapiens PAC clone RP6-91H8 from 14q24.3, complete sequence Length = 128398 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||| ||||| ||||||||| Sbjct: 99648 cacacacacacgcacgcacactcactctc 99620
>gb|AY107739.1| Zea mays PCO089350 mRNA sequence Length = 645 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 578 cagcctcccgccccacgagtgcggc 602 |||||||| |||||||||||||||| Sbjct: 286 cagcctccagccccacgagtgcggc 310
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ccacccgccgcgacgtcgccg 201 ||||||||||||||||||||| Sbjct: 688896 ccacccgccgcgacgtcgccg 688916
>gb|U58776.1|DMU58776 Drosophila melanogaster glutamate-gated chloride channel (DrosGluCl) mRNA, complete cds Length = 3958 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| ||||| ||||| Sbjct: 122 cacacacacacgcgcgcgctctcgctctc 94
>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence Length = 154085 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ccaccacacacacacgcgcgc 26 ||||||||||||||||||||| Sbjct: 130733 ccaccacacacacacgcgcgc 130753
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 854 aattattattttggggtgctg 874 ||||||||||||||||||||| Sbjct: 9829 aattattattttggggtgctg 9849
>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence Length = 217329 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||| ||||||||| ||||| Sbjct: 153088 cacacacacacgcacgcactctctctctc 153116
>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence Length = 186518 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ccacacacacacgcgcgcact 29 ||||||||||||||||||||| Sbjct: 53888 ccacacacacacgcgcgcact 53908
>gb|AC002473.1|AC002473 Drosophila melanogaster (P1 DS02833 (D61)) DNA sequence, complete sequence Length = 71504 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 48460 cacacacacacgagcgcactctcgctctc 48432
>emb|AJ010169.1|DME010169 Drosophila melanogaster mRNA for Ariadne-2 protein Length = 2998 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 cacacacacacgcgcgcactctcactctc 38 |||||||||||| |||||||||| ||||| Sbjct: 243 cacacacacacgagcgcactctcgctctc 215
>gb|M76700.1|DROZSTA Drosophila virilis zeste gene, complete cds Length = 2708 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 cacacacacacgcgcgcactctcactctc 38 ||||||||||||||||| | ||||||||| Sbjct: 249 cacacacacacgcgcgcgcgctcactctc 277 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 177,357,190 Number of extensions: 19739078 Number of successful extensions: 259371 Number of sequences better than 10.0: 155 Number of HSP's gapped: 259339 Number of HSP's successfully gapped: 196 Length of query: 1072 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1049 Effective length of database: 18,503,978,556 Effective search space: 19410673505244 Effective search space used: 19410673505244 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
