ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf39a20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068554:Os08g0242700 | 111 | 4e-24 | 2 | AK099473:Os12g0152700 | 66 | 3e-23 | 3 | AK060070:Os12g0152700 | 66 | 3e-23 | 4 | AK059049:Os08g0242700 | 67 | 4e-18 | 5 | Os03g0247900:Os03g0247900 | 34 | 0.65 | 6 | AK099775:Os05g0240200 | 33 | 1.4 | 7 | AK110790:Os03g0289800 | 32 | 3.2 | 8 | AK069008:Os03g0289800 | 32 | 3.2 | 9 | AK060599:Os03g0289800 | 32 | 3.2 | 10 | AK119582:Os08g0322600 | 31 | 5.5 | 11 | AK069839:Os08g0322600 | 31 | 5.5 | 12 | AK107452:Os04g0435200 | 31 | 7.2 | 13 | AK071010:Os03g0598100 | 31 | 7.2 | 14 | Os05g0545200:Os05g0545200 | 30 | 9.4 | 15 | AK121397:Os06g0286500 | 30 | 9.4 | 16 | AK106161:Os08g0533600 | 30 | 9.4 | 17 | AK105564:Os02g0598600 | 30 | 9.4 | 18 | AK098885:Os08g0533600 | 30 | 9.4 | 19 | AK061731:Os08g0533600 | 30 | 9.4 |
|---|
>AK068554:Os08g0242700 | Length = 196 Score = 111 bits (277), Expect = 4e-24 Identities = 59/86 (68%), Positives = 66/86 (76%) Frame = +1 Query: 1558 NGSSSNTDTVPTPKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKASVCL 1737 +GSSSNTDTVPTPKVIIDQDSDPDATIVE+T TM+AL+NLGLNVVKASVCL Sbjct: 2 DGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCL 61 Query: 1738 DSSGKHNKFAITKS*VDHFIIIPDVL 1815 DS+GKH K AITK I P++L Sbjct: 62 DSTGKHIKLAITKLSTGRKIGEPELL 87 Score = 88.6 bits (218), Expect = 3e-17 Identities = 42/49 (85%), Positives = 47/49 (95%) Frame = +2 Query: 1868 STGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVV 2014 STGRKI +PELLEAVRLTIINNM++YHPEASSQLA+GATFG EPPTE+V Sbjct: 76 STGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELV 124 Score = 43.9 bits (102), Expect = 8e-04 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +2 Query: 2453 VDVDIATHIEIYDDGPERRXXXXXXXXXXXXXQGKFMYFVFHPNKV 2590 VDVDIATHI+IYDDGP+RR K F +H N + Sbjct: 124 VDVDIATHIDIYDDGPDRRYDLCLALCFIPQIVRKIHIFFYHQNNM 169
>AK099473:Os12g0152700 | Length = 279 Score = 65.9 bits (159), Expect(2) = 3e-23 Identities = 27/48 (56%), Positives = 39/48 (81%) Frame = +2 Query: 1871 TGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVV 2014 +GRK++DP+ LE +RLT+INN+L+YHPE+S LAMG FG++ P + V Sbjct: 136 SGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKV 183 Score = 63.2 bits (152), Expect(2) = 3e-23 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +1 Query: 1549 VL*NGSSSNTDTVPTPKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKAS 1728 VL S+++ D +P P V+IDQDSD DATIV+++ TM AL++LGL+V K S Sbjct: 60 VLGASSTTSDDAIPQPVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGS 119 Query: 1729 VCLDSSGKHNKFAITKS 1779 V +S+ KF I +S Sbjct: 120 VSTESAVTQTKFHIMRS 136 Score = 52.4 bits (124), Expect(2) = 3e-09 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = +2 Query: 2912 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTE 3019 S+L +E+ADRPGLL+++VKII D+N+ V+S E DTE Sbjct: 201 SMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTE 236 Score = 29.6 bits (65), Expect(2) = 3e-09 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +3 Query: 3102 AKAKFHVSYRGKPLIKALQQV 3164 AK KFHVSYRG L +L QV Sbjct: 240 AKDKFHVSYRGAKLNSSLSQV 260 Score = 33.9 bits (76), Expect = 0.85 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +2 Query: 3335 SMLLQVLANSLRYFLRRPTTEDASF 3409 S L QVL N LRY+LRRP T++ S+ Sbjct: 255 SSLSQVLVNCLRYYLRRPETDEDSY 279 Score = 32.0 bits (71), Expect = 3.2 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +2 Query: 2447 RQVDVDIATHIEIYDDGPER 2506 ++VDVD+ TH+ + DDGP+R Sbjct: 181 KKVDVDVVTHVIVEDDGPKR 200
>AK060070:Os12g0152700 | Length = 274 Score = 65.9 bits (159), Expect(2) = 3e-23 Identities = 27/48 (56%), Positives = 39/48 (81%) Frame = +2 Query: 1871 TGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVV 2014 +GRK++DP+ LE +RLT+INN+L+YHPE+S LAMG FG++ P + V Sbjct: 131 SGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKV 178 Score = 63.2 bits (152), Expect(2) = 3e-23 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +1 Query: 1549 VL*NGSSSNTDTVPTPKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKAS 1728 VL S+++ D +P P V+IDQDSD DATIV+++ TM AL++LGL+V K S Sbjct: 55 VLGASSTTSDDAIPQPVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGS 114 Query: 1729 VCLDSSGKHNKFAITKS 1779 V +S+ KF I +S Sbjct: 115 VSTESAVTQTKFHIMRS 131 Score = 52.4 bits (124), Expect(2) = 3e-09 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = +2 Query: 2912 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTE 3019 S+L +E+ADRPGLL+++VKII D+N+ V+S E DTE Sbjct: 196 SMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTE 231 Score = 29.6 bits (65), Expect(2) = 3e-09 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +3 Query: 3102 AKAKFHVSYRGKPLIKALQQV 3164 AK KFHVSYRG L +L QV Sbjct: 235 AKDKFHVSYRGAKLNSSLSQV 255 Score = 33.9 bits (76), Expect = 0.85 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +2 Query: 3335 SMLLQVLANSLRYFLRRPTTEDASF 3409 S L QVL N LRY+LRRP T++ S+ Sbjct: 250 SSLSQVLVNCLRYYLRRPETDEDSY 274 Score = 32.0 bits (71), Expect = 3.2 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +2 Query: 2447 RQVDVDIATHIEIYDDGPER 2506 ++VDVD+ TH+ + DDGP+R Sbjct: 176 KKVDVDVVTHVIVEDDGPKR 195
>AK059049:Os08g0242700 | Length = 97 Score = 67.0 bits (162), Expect(2) = 4e-18 Identities = 34/36 (94%), Positives = 35/36 (97%) Frame = +2 Query: 2912 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTE 3019 SLLVVE+ADRPGLLVDLVKII DINITVQSGEFDTE Sbjct: 19 SLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTE 54 Score = 45.1 bits (105), Expect(2) = 4e-18 Identities = 21/21 (100%), Positives = 21/21 (100%) Frame = +3 Query: 3102 AKAKFHVSYRGKPLIKALQQV 3164 AKAKFHVSYRGKPLIKALQQV Sbjct: 58 AKAKFHVSYRGKPLIKALQQV 78 Score = 41.6 bits (96), Expect = 0.004 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = +2 Query: 3341 LLQVLANSLRYFLRRPTTEDASF 3409 L QVLANSLRYFLRRPTTE+ S+ Sbjct: 75 LQQVLANSLRYFLRRPTTEEGSY 97 Score = 39.3 bits (90), Expect = 0.020 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = +2 Query: 2453 VDVDIATHIEIYDDGPER 2506 VDVDIATHI+IYDDGP+R Sbjct: 1 VDVDIATHIDIYDDGPDR 18
>Os03g0247900:Os03g0247900 | Length = 442 Score = 34.3 bits (77), Expect = 0.65 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 2909 FSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTE 3019 +S++ V DRP LL D+V + D++ V G FDT+ Sbjct: 246 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTD 282
>AK099775:Os05g0240200 | Length = 1360 Score = 33.1 bits (74), Expect = 1.4 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 2/96 (2%) Frame = -1 Query: 323 CRCKWPPPGKLMVPGRRRKYAGAGTEGPCGYGDGHFWNLLPHSAKKRAKIEIKSCQINRG 144 C C W P L P Y+ G G+ DG S + +I S I Sbjct: 1244 CLCSWFPSDPLSAPVSSAVYSSDGLLIYAGFCDGAIGIFQVESLMLQCRI-APSAYIPSS 1302 Query: 143 VGGGGEMV--LQRRRR*WDHNEDIYGCRGGSIHRIE 42 V GGE+V + W N+ G G++H +E Sbjct: 1303 VSSGGEIVYPMVVAAHPWKPNQFAVGMSDGAVHVLE 1338
>AK110790:Os03g0289800 | Length = 272 Score = 32.0 bits (71), Expect = 3.2 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 12/83 (14%) Frame = -1 Query: 341 PQLSRRCRCKW------PPPGKLMVPGRRRKYAGAGTE------GPCGYGDGHFWNLLPH 198 P+L RR R W P + Y G G+ GP +GD +F +LLP Sbjct: 89 PELLRRARAAWRGFFARPAEAREAYANSPATYEGYGSRLGTAKGGPLDWGDYYFLHLLPA 148 Query: 197 SAKKRAKIEIKSCQINRGVGGGG 129 + K K S GGGG Sbjct: 149 ALKSHDKWPTSSVP----AGGGG 167
>AK069008:Os03g0289800 | Length = 387 Score = 32.0 bits (71), Expect = 3.2 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 12/83 (14%) Frame = -1 Query: 341 PQLSRRCRCKW------PPPGKLMVPGRRRKYAGAGTE------GPCGYGDGHFWNLLPH 198 P+L RR R W P + Y G G+ GP +GD +F +LLP Sbjct: 89 PELLRRARAAWRGFFARPAEAREAYANSPATYEGYGSRLGTAKGGPLDWGDYYFLHLLPA 148 Query: 197 SAKKRAKIEIKSCQINRGVGGGG 129 + K K S GGGG Sbjct: 149 ALKSHDKWPTSSVP----AGGGG 167
>AK060599:Os03g0289800 | Length = 387 Score = 32.0 bits (71), Expect = 3.2 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 12/83 (14%) Frame = -1 Query: 341 PQLSRRCRCKW------PPPGKLMVPGRRRKYAGAGTE------GPCGYGDGHFWNLLPH 198 P+L RR R W P + Y G G+ GP +GD +F +LLP Sbjct: 89 PELLRRARAAWRGFFARPAEAREAYANSPATYEGYGSRLGTAKGGPLDWGDYYFLHLLPA 148 Query: 197 SAKKRAKIEIKSCQINRGVGGGG 129 + K K S GGGG Sbjct: 149 ALKSHDKWPTSSVP----AGGGG 167
>AK119582:Os08g0322600 | Length = 418 Score = 31.2 bits (69), Expect = 5.5 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Frame = +1 Query: 109 LLCSTISPPPPTPRFI*QDLISIFARFLA----EWGRRFQKWPSP*PQGPSVPAPAYFRR 276 LL S +SPPPPT D S A + A RR + WP P P P V + +Y R Sbjct: 23 LLLSALSPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPP-PPPPRVSSSSYVGR 81 Query: 277 ---RPGTISL 297 P T S+ Sbjct: 82 GILLPATFSI 91
>AK069839:Os08g0322600 | Length = 418 Score = 31.2 bits (69), Expect = 5.5 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Frame = +1 Query: 109 LLCSTISPPPPTPRFI*QDLISIFARFLA----EWGRRFQKWPSP*PQGPSVPAPAYFRR 276 LL S +SPPPPT D S A + A RR + WP P P P V + +Y R Sbjct: 23 LLLSALSPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPP-PPPPRVSSSSYVGR 81 Query: 277 ---RPGTISL 297 P T S+ Sbjct: 82 GILLPATFSI 91
>AK107452:Os04g0435200 | Length = 277 Score = 30.8 bits (68), Expect = 7.2 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -1 Query: 203 PHSAKKRAKIEIKSCQINRGVGGGGEMVLQRRRR*WDHNEDIYGCRGGSIHRIERWKREV 24 PH ++ A + + RG GG GE + D E+ G RGG++ +ER ++++ Sbjct: 154 PHGGERDAAVAGQRVHDARGAGGDGEAAEEEGAP--DDEEEGDGARGGAVPAVERVEQDL 211
>AK071010:Os03g0598100 | Length = 453 Score = 30.8 bits (68), Expect = 7.2 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 1594 PKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 1773 P++ ID DS DATIV V + L +L L + KA + D + F IT Sbjct: 27 PRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITSDGGWVMDVFNIT 86
>Os05g0545200:Os05g0545200 | Length = 1052 Score = 30.4 bits (67), Expect = 9.4 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = -3 Query: 3024 VTSVSNSPDWTVILMSAMILTRSTNNPGRSADSTTSKLKWNIGGDQINAI 2875 VT +S + L A +TRS N+ G S ++ + ++ ++G D++N + Sbjct: 154 VTIYQDSTSYDTTLDIASSITRSFNSAGYSTPNSLNSIRADVGSDRVNML 203
>AK121397:Os06g0286500 | Length = 974 Score = 30.4 bits (67), Expect = 9.4 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +3 Query: 996 KKLPSLLQLTIGYERFLHSILLCHKHWLRRLNTCFLWINLFP 1121 ++LPS L+ E + L + H L CFL++++FP Sbjct: 400 RELPSELESNPSLEAMRRMVTLSYNHLPSHLKPCFLYLSIFP 441
>AK106161:Os08g0533600 | Length = 463 Score = 30.4 bits (67), Expect = 9.4 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 1594 PKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 1773 P V+ID DS AT++ V + L +L L + KA + D + + F +T Sbjct: 27 PSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDGNWFMDVFNVT 86
>AK105564:Os02g0598600 | Length = 377 Score = 30.4 bits (67), Expect = 9.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -1 Query: 1589 GTVSVLLELPFYKTKYLQLNMEVHRMFCRKQCYLPQQLQAKQ 1464 GT+ L E+PFY +++ + RM+C Y Q +A Q Sbjct: 122 GTMYELPEMPFYSFEFIVYDEHARRMYCVNTTYALQLARATQ 163
>AK098885:Os08g0533600 | Length = 463 Score = 30.4 bits (67), Expect = 9.4 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 1594 PKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 1773 P V+ID DS AT++ V + L +L L + KA + D + + F +T Sbjct: 27 PSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDGNWFMDVFNVT 86
>AK061731:Os08g0533600 | Length = 463 Score = 30.4 bits (67), Expect = 9.4 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 1594 PKVIIDQDSDPDATIVEVTXXXXXXXXXXTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 1773 P V+ID DS AT++ V + L +L L + KA + D + + F +T Sbjct: 27 PSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDGNWFMDVFNVT 86 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 95,271,855 Number of extensions: 2059782 Number of successful extensions: 4995 Number of sequences better than 10.0: 19 Number of HSP's gapped: 4979 Number of HSP's successfully gapped: 34 Length of query: 1220 Length of database: 15,399,855 Length adjustment: 112 Effective length of query: 1108 Effective length of database: 10,915,263 Effective search space: 12094111404 Effective search space used: 12094111404 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
