No.
Definition
Score (bits)
E Value
1 ref|NM_001067877.1| Oryza sativa (japonica cultivar-group) Os08g...
305
6e-79
2 dbj|AK068554.1| Oryza sativa (japonica cultivar-group) cDNA clon...
305
6e-79
3 emb|CT828744.1| Oryza sativa (indica cultivar-group) cDNA clone:...
232
7e-57
4 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
216
4e-52
5 dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D...
216
4e-52
6 dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D...
216
4e-52
7 dbj|AK059049.1| Oryza sativa (japonica cultivar-group) cDNA clon...
131
2e-26
8 emb|CT029828.1| Poplar cDNA sequences
62
2e-05
9 emb|CT029827.1| Poplar cDNA sequences
62
2e-05
10 gb|AF277252.1|AF277252 Australopyrum pectinatum isolate H6771 di...
62
2e-05
11 gb|AF277251.1|AF277251 Australopyrum retrofractum isolate H6723 ...
62
2e-05
12 gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1...
56
0.001
13 emb|CT009587.1| Triticum turgidum
54
0.004
14 emb|CT009586.1| Triticum aestivum
54
0.004
15 ref|NM_202118.1| Arabidopsis thaliana unknown protein (AT1G16880...
54
0.004
16 ref|NM_101549.3| Arabidopsis thaliana unknown protein (AT1G16880...
54
0.004
17 gb|BT012883.1| Lycopersicon esculentum clone 113986R, mRNA sequence
54
0.004
18 emb|CR626933.1| Triticum turgidum
54
0.004
19 emb|CR626929.1| Triticum aestivum
54
0.004
20 dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ...
54
0.004
21 gb|BT006317.1| Arabidopsis thaliana At1g16880 mRNA, complete cds
54
0.004
22 gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 dis...
54
0.004
23 gb|AF386988.1|AF386988 Arabidopsis thaliana Unknown protein (F6I...
54
0.004
24 gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L...
54
0.004
25 gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17...
54
0.004
26 gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I...
54
0.004
27 emb|BX814468.1|CNS0AC2H Arabidopsis thaliana Full-length cDNA Co...
54
0.004
28 emb|BX814192.1|CNS0AC6C Arabidopsis thaliana Full-length cDNA Co...
54
0.004
29 emb|BX813743.1|CNS0AC5W Arabidopsis thaliana Full-length cDNA Co...
54
0.004
30 emb|BX841809.1|CNS09Y1P Arabidopsis thaliana Full-length cDNA Co...
54
0.004
31 gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN...
54
0.004
32 gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN...
54
0.004
33 gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254...
52
0.015
34 gb|DQ995513.1| Hordeum vulgare clone 604d05_c-69 genomic sequence
50
0.058
35 gb|AC160454.31| Glycine max clone gmw1-15k6, complete sequence
48
0.23
36 gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20...
48
0.23
37 gb|AC187294.1| Glycine max clone gmw1-105h23, complete sequence
48
0.23
38 gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se...
48
0.23
39 gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1...
48
0.23
40 emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene
48
0.23
41 gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g...
48
0.23
42 gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g...
48
0.23
43 gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g...
48
0.23
44 gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14...
46
0.90
45 gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosom...
46
0.90
46 gb|AC069356.6| Homo sapiens chromosome 18, clone RP11-575O17, co...
46
0.90
47 emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase
46
0.90
48 emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B r...
46
0.90
49 ref|XM_001015028.1| Tetrahymena thermophila SB210 hypothetical p...
44
3.6
50 emb|CT009735.1| Triticum aestivum
44
3.6
51 gb|AC125018.15| Mus musculus chromosome 7, clone RP24-158A20, co...
44
3.6
52 gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome ...
44
3.6
53 gb|AY434664.1| Leucocephalon yuwonoi orphan G protein-coupled re...
44
3.6
54 gb|BC042417.1| Homo sapiens chromosome 9 open reading frame 52, ...
44
3.6
55 gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, com...
44
3.6
56 gb|AC101810.5| Mus musculus chromosome 15, clone RP24-278M16, co...
44
3.6
57 gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, com...
44
3.6
58 gb|AF068708.1| Caenorhabditis elegans cosmid C18G1, complete seq...
44
3.6
59 dbj|AK093459.1| Homo sapiens cDNA FLJ36140 fis, clone TESTI20249...
44
3.6
60 gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence
44
3.6
61 emb|CR626934.1| Triticum aestivum
44
3.6
62 gb|AC112203.2| Homo sapiens chromosome 5 clone RP11-72K17, compl...
44
3.6
63 emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroi...
44
3.6
64 emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on ch...
44
3.6
65 emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
44
3.6
66 emb|AL844584.4| Mouse DNA sequence from clone RP23-309F17 on chr...
44
3.6
67 gb|AC154703.2| Mus musculus BAC clone RP24-349H1 from chromosome...
44
3.6
68 emb|BX548028.5| Zebrafish DNA sequence from clone CH211-260H24 i...
44
3.6
69 ref|XM_671711.1| Plasmodium berghei strain ANKA hypothetical pro...
44
3.6
70 ref|XM_738724.1| Plasmodium chabaudi chabaudi hypothetical prote...
44
3.6
71 gb|AY500541.1| Pachyella adnata voucher DHP-02.496 (FH) 28S ribo...
44
3.6
>ref|NM_001067877.1 | Oryza sativa (japonica cultivar-group) Os08g0242700 (Os08g0242700)
mRNA, partial cds
Length = 1779
Score = 305 bits (154), Expect = 6e-79
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 1458 ctagtgctgcttcgcctgcagctgttgaggtagatagcattgcttacgacaaaacattcg 1517
|||| |||||||| |||| ||||| |||||||||||||| |||||| |||||||| |
Sbjct: 256 ctagagctgcttcctctgcggctgtcgaggtagatagcatagcttacagaaaaacattgg 315
Query: 1518 atgaacctccatgttcaactgcagatactttgttttgtagaatgggagctctagcaacac 1577
|||||| |||||||||||||||| |||||||| || | || |||||||||||||||||||
Sbjct: 316 atgaacttccatgttcaactgcatatactttggttagcaggatgggagctctagcaacac 375
Query: 1578 tgatacagtccctacaccaaaagttataatagatcaagactcagatcctgatgcaactat 1637
||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 376 tgacacagttcctaccccgaaagttataatagatcaagactcagatccggatgcgaccat 435
Query: 1638 tgtggaagtaaccttgggtgaccgtcttggggatcttcttgatactatgagtgccctgag 1697
||| || |||| |||||||||||||| || |||||||||||||| |||| ||||||||
Sbjct: 436 tgtagagataactttgggtgaccgtctcggtgatcttcttgataccatgaatgccctgaa 495
Query: 1698 gaatttagggttaaatgttgtgaaagctagtgtttgccttgattcttccggcaagcacaa 1757
|||||||||| ||||||||||||||||||| || ||||| |||||| | |||||||| |
Sbjct: 496 gaatttagggctaaatgttgtgaaagctagcgtctgcctcgattctactggcaagcatat 555
Query: 1758 taagtttgctataacaaa 1775
|||||| |||||||||||
Sbjct: 556 taagttagctataacaaa 573
Score = 151 bits (76), Expect = 2e-32
Identities = 109/120 (90%)
Strand = Plus / Plus
Query: 2901 tgttccatttcagtttacttgttgtggaatcagctgaccgtccagggttgttggttgatc 2960
||||||||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 1138 tgttccatttcagcttacttgtagtggaaacagctgaccgaccaggtttgttggttgacc 1197
Query: 2961 tagttaagatcattgctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 1198 ttgttaagatcattgatgacatcaacatcaccgtccaatctggagaatttgacactgagg 1257
Score = 133 bits (67), Expect = 5e-27
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 1871 actggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatcaac 1930
|||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |||
Sbjct: 581 actggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataaac 640
Query: 1931 aacatgcttgaatatcatcctgaagctagcagtcaattggccatgggtgcaacttttggg 1990
|||||| || | || || || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 641 aacatgattcagtaccacccagaagctagcagccaattggctctgggtgcaacttttggt 700
Query: 1991 ctagagccccctacggaagtggt 2013
| |||||||||||| ||| ||||
Sbjct: 701 ccagagccccctacagaactggt 723
Score = 115 bits (58), Expect = 1e-21
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 3341 ttgctgcaggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggat 3400
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1317 ttgcagcaggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggag 1376
Query: 3401 gccagtttctaggcagat 3418
| ||||| ||||||||||
Sbjct: 1377 ggcagttactaggcagat 1394
Score = 71.9 bits (36), Expect = 2e-08
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 2452 ggttgatgtggacatagcaactcacatagaaatctatgacgatggtcctgaaagaaggta 2511
||||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 721 ggttgatgtggacatagcaacccacatagacatatatgatgatggccctgacagaaggta 780
Score = 50.1 bits (25), Expect = 0.058
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 3091 aggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaatcaagg 3150
|||| ||||| || || |||||||||||||||||||| |||| || ||||| ||||| |
Sbjct: 1255 agggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattgatcaaag 1314
Query: 3151 ctttgcaacaggt 3163
| ||||| |||||
Sbjct: 1315 ccttgcagcaggt 1327
>dbj|AK068554.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013155B11, full
insert sequence
Length = 1782
Score = 305 bits (154), Expect = 6e-79
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 1458 ctagtgctgcttcgcctgcagctgttgaggtagatagcattgcttacgacaaaacattcg 1517
|||| |||||||| |||| ||||| |||||||||||||| |||||| |||||||| |
Sbjct: 259 ctagagctgcttcctctgcggctgtcgaggtagatagcatagcttacagaaaaacattgg 318
Query: 1518 atgaacctccatgttcaactgcagatactttgttttgtagaatgggagctctagcaacac 1577
|||||| |||||||||||||||| |||||||| || | || |||||||||||||||||||
Sbjct: 319 atgaacttccatgttcaactgcatatactttggttagcaggatgggagctctagcaacac 378
Query: 1578 tgatacagtccctacaccaaaagttataatagatcaagactcagatcctgatgcaactat 1637
||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 379 tgacacagttcctaccccgaaagttataatagatcaagactcagatccggatgcgaccat 438
Query: 1638 tgtggaagtaaccttgggtgaccgtcttggggatcttcttgatactatgagtgccctgag 1697
||| || |||| |||||||||||||| || |||||||||||||| |||| ||||||||
Sbjct: 439 tgtagagataactttgggtgaccgtctcggtgatcttcttgataccatgaatgccctgaa 498
Query: 1698 gaatttagggttaaatgttgtgaaagctagtgtttgccttgattcttccggcaagcacaa 1757
|||||||||| ||||||||||||||||||| || ||||| |||||| | |||||||| |
Sbjct: 499 gaatttagggctaaatgttgtgaaagctagcgtctgcctcgattctactggcaagcatat 558
Query: 1758 taagtttgctataacaaa 1775
|||||| |||||||||||
Sbjct: 559 taagttagctataacaaa 576
Score = 151 bits (76), Expect = 2e-32
Identities = 109/120 (90%)
Strand = Plus / Plus
Query: 2901 tgttccatttcagtttacttgttgtggaatcagctgaccgtccagggttgttggttgatc 2960
||||||||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 1141 tgttccatttcagcttacttgtagtggaaacagctgaccgaccaggtttgttggttgacc 1200
Query: 2961 tagttaagatcattgctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 1201 ttgttaagatcattgatgacatcaacatcaccgtccaatctggagaatttgacactgagg 1260
Score = 133 bits (67), Expect = 5e-27
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 1871 actggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatcaac 1930
|||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |||
Sbjct: 584 actggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataaac 643
Query: 1931 aacatgcttgaatatcatcctgaagctagcagtcaattggccatgggtgcaacttttggg 1990
|||||| || | || || || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 644 aacatgattcagtaccacccagaagctagcagccaattggctctgggtgcaacttttggt 703
Query: 1991 ctagagccccctacggaagtggt 2013
| |||||||||||| ||| ||||
Sbjct: 704 ccagagccccctacagaactggt 726
Score = 115 bits (58), Expect = 1e-21
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 3341 ttgctgcaggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggat 3400
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1320 ttgcagcaggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggag 1379
Query: 3401 gccagtttctaggcagat 3418
| ||||| ||||||||||
Sbjct: 1380 ggcagttactaggcagat 1397
Score = 71.9 bits (36), Expect = 2e-08
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 2452 ggttgatgtggacatagcaactcacatagaaatctatgacgatggtcctgaaagaaggta 2511
||||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 724 ggttgatgtggacatagcaacccacatagacatatatgatgatggccctgacagaaggta 783
Score = 50.1 bits (25), Expect = 0.058
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 3091 aggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaatcaagg 3150
|||| ||||| || || |||||||||||||||||||| |||| || ||||| ||||| |
Sbjct: 1258 agggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattgatcaaag 1317
Query: 3151 ctttgcaacaggt 3163
| ||||| |||||
Sbjct: 1318 ccttgcagcaggt 1330
>emb|CT828744.1 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA013D10, full
insert sequence
Length = 1476
Score = 232 bits (117), Expect = 7e-57
Identities = 192/217 (88%)
Strand = Plus / Plus
Query: 1559 atgggagctctagcaacactgatacagtccctacaccaaaagttataatagatcaagact 1618
|||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 436 atgggagctctagcaacactgacacagttcctaccccgaaagttataatagatcaagact 495
Query: 1619 cagatcctgatgcaactattgtggaagtaaccttgggtgaccgtcttggggatcttcttg 1678
||||||| ||||| || ||||| || |||| |||||||||||||| || ||||||||||
Sbjct: 496 cagatccggatgcgaccattgtagagataactttgggtgaccgtctcggtgatcttcttg 555
Query: 1679 atactatgagtgccctgaggaatttagggttaaatgttgtgaaagctagtgtttgccttg 1738
|||| |||| |||||||| |||||||||| ||||||||||||||||||| || ||||| |
Sbjct: 556 ataccatgaatgccctgaagaatttagggctaaatgttgtgaaagctagcgtctgcctcg 615
Query: 1739 attcttccggcaagcacaataagtttgctataacaaa 1775
||||| | |||||||| | |||||| |||||||||||
Sbjct: 616 attctactggcaagcatattaagttagctataacaaa 652
Score = 133 bits (67), Expect = 5e-27
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 1871 actggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatcaac 1930
|||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |||
Sbjct: 660 actggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataaac 719
Query: 1931 aacatgcttgaatatcatcctgaagctagcagtcaattggccatgggtgcaacttttggg 1990
|||||| || | || || || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 720 aacatgattcagtaccacccagaagctagcagccaattggctctgggtgcaacttttggt 779
Query: 1991 ctagagccccctacggaagtggt 2013
| |||||||||||| ||| ||||
Sbjct: 780 ccagagccccctacagaactggt 802
Score = 131 bits (66), Expect = 2e-26
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 2915 ttacttgttgtggaatcagctgaccgtccagggttgttggttgatctagttaagatcatt 2974
|||||||| |||||| |||||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 858 ttacttgtagtggaaacagctgaccgaccaggtttgttggttgaccttgttaagatcatt 917
Query: 2975 gctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 918 gatgacatcaacatcaccgtccaatctggagaatttgacactgagg 963
Score = 115 bits (58), Expect = 1e-21
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 3341 ttgctgcaggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggat 3400
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1023 ttgcagcaggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggag 1082
Query: 3401 gccagtttctaggcagat 3418
| ||||| ||||||||||
Sbjct: 1083 ggcagttactaggcagat 1100
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 21 gcccacctcccgtttccacctctctatcctatggatagagcctccgcgacaaccatagat 80
||||||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 19 gcccacctcccattcgcatctcgctatcctatggatagagccgccgcgacagccatagat 78
Query: 81 atcctcgttatgatcccatcagcgccttctcctt 114
||| |||| |||||||| || ||||||| ||||
Sbjct: 79 atcgtcgtcatgatcccgtcctcgccttcgcctt 112
Score = 65.9 bits (33), Expect = 1e-06
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 2452 ggttgatgtggacatagcaactcacatagaaatctatgacgatggtcctgaaagaag 2508
||||||||||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 800 ggttgatgtggacatagcaacccacatagacatatatgatgatggccctgacagaag 856
Score = 50.1 bits (25), Expect = 0.058
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 3091 aggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaatcaagg 3150
|||| ||||| || || |||||||||||||||||||| |||| || ||||| ||||| |
Sbjct: 961 agggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattgatcaaag 1020
Query: 3151 ctttgcaacaggt 3163
| ||||| |||||
Sbjct: 1021 ccttgcagcaggt 1033
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
Length = 28434780
Score = 216 bits (109), Expect = 4e-52
Identities = 196/225 (87%)
Strand = Plus / Minus
Query: 1458 ctagtgctgcttcgcctgcagctgttgaggtagatagcattgcttacgacaaaacattcg 1517
|||| |||||||| |||| ||||| |||||||||||||| |||||| |||||||| |
Sbjct: 8664982 ctagagctgcttcctctgcggctgtcgaggtagatagcatagcttacagaaaaacattgg 8664923
Query: 1518 atgaacctccatgttcaactgcagatactttgttttgtagaatgggagctctagcaacac 1577
|||||| |||||||||||||||| |||||||| || | || |||||||||||||||||||
Sbjct: 8664922 atgaacttccatgttcaactgcatatactttggttagcaggatgggagctctagcaacac 8664863
Query: 1578 tgatacagtccctacaccaaaagttataatagatcaagactcagatcctgatgcaactat 1637
||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 8664862 tgacacagttcctaccccgaaagttataatagatcaagactcagatccggatgcgaccat 8664803
Query: 1638 tgtggaagtaaccttgggtgaccgtcttggggatcttcttgatac 1682
||| || |||| |||||||||||||| || ||||||||||||||
Sbjct: 8664802 tgtagagataactttgggtgaccgtctcggtgatcttcttgatac 8664758
Score = 159 bits (80), Expect = 9e-35
Identities = 122/136 (89%)
Strand = Plus / Minus
Query: 2901 tgttccatttcagtttacttgttgtggaatcagctgaccgtccagggttgttggttgatc 2960
||||||||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 8663528 tgttccatttcagcttacttgtagtggaaacagctgaccgaccaggtttgttggttgacc 8663469
Query: 2961 tagttaagatcattgctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 8663468 ttgttaagatcattgatgacatcaacatcaccgtccaatctggagaatttgacactgagg 8663409
Query: 3021 tgacaccagtcatttg 3036
| |||| | |||||||
Sbjct: 8663408 taacactaatcatttg 8663393
Score = 117 bits (59), Expect = 3e-22
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 1809 tgtacttttctacacatatcaattcttgtctagaatgagtgacaacaatactctacaggt 1868
||||||||||| ||||||||| |||||| ||||| |||||| |||||| |||||||
Sbjct: 8664448 tgtacttttctgcacatatcagttcttgcctaga----gtgacaggaatactgtacaggt 8664393
Query: 1869 caactggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatca 1928
| |||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |
Sbjct: 8664392 cgactggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataa 8664333
Query: 1929 acaacatg 1936
||||||||
Sbjct: 8664332 acaacatg 8664325
Score = 111 bits (56), Expect = 2e-20
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 3347 caggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggatgccagt 3406
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct: 8663071 caggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggagggcagt 8663012
Query: 3407 ttctaggcagat 3418
| ||||||||||
Sbjct: 8663011 tactaggcagat 8663000
Score = 95.6 bits (48), Expect = 1e-15
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1684 atgagtgccctgaggaatttagggttaaatgttgtgaaagctagtgtttgccttgattct 1743
|||| |||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||
Sbjct: 8664655 atgaatgccctgaagaatttagggctaaatgttgtgaaagctagcgtctgcctcgattct 8664596
Query: 1744 tccggcaagcacaataagtttgctataacaaa 1775
| |||||||| | |||||| |||||||||||
Sbjct: 8664595 actggcaagcatattaagttagctataacaaa 8664564
Score = 85.7 bits (43), Expect = 1e-12
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 2425 taaatagtttttgcatgtaaatcggcaggttgatgtggacatagcaactcacatagaaat 2484
|||||| ||| ||||||| ||| | ||||||||||||||||||||||| |||||||| ||
Sbjct: 8663972 taaatattttctgcatgtgaattgtcaggttgatgtggacatagcaacccacatagacat 8663913
Query: 2485 ctatgacgatggtcctgaaagaaggta 2511
||||| ||||| ||||| ||||||||
Sbjct: 8663912 atatgatgatggccctgacagaaggta 8663886
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 21 gcccacctcccgtttccacctctctatcctatggatagagcctccgcgacaaccatagat 80
||||||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 8666521 gcccacctcccattcgcatctcgctatcctatggatagagccgccgcgacagccatagat 8666462
Query: 81 atcctcgttatgatcccatcagcgccttctcctt 114
||| |||| |||||||| || ||||||| ||||
Sbjct: 8666461 atcgtcgtcatgatcccgtcctcgccttcgcctt 8666428
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1952 gaagctagcagtcaattggccatgggtgcaacttttgggctagagccccctacggaagtg 2011
||||||||||| |||||||| |||||||||||||||| | |||||||||||| ||| ||
Sbjct: 8664222 gaagctagcagccaattggctctgggtgcaacttttggtccagagccccctacagaactg 8664163
Query: 2012 gtact 2016
|||||
Sbjct: 8664162 gtact 8664158
Score = 60.0 bits (30), Expect = 6e-05
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 3085 tcttgtaggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaa 3144
|||| ||||| ||||| || || |||||||||||||||||||| |||| || ||||| |
Sbjct: 8663336 tcttatagggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattga 8663277
Query: 3145 tcaaggctttgcaacaggtaaa 3166
|||| || ||||| ||||||||
Sbjct: 8663276 tcaaagccttgcagcaggtaaa 8663255
>dbj|AP005249.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0087F21
Length = 187401
Score = 216 bits (109), Expect = 4e-52
Identities = 196/225 (87%)
Strand = Plus / Minus
Query: 1458 ctagtgctgcttcgcctgcagctgttgaggtagatagcattgcttacgacaaaacattcg 1517
|||| |||||||| |||| ||||| |||||||||||||| |||||| |||||||| |
Sbjct: 176893 ctagagctgcttcctctgcggctgtcgaggtagatagcatagcttacagaaaaacattgg 176834
Query: 1518 atgaacctccatgttcaactgcagatactttgttttgtagaatgggagctctagcaacac 1577
|||||| |||||||||||||||| |||||||| || | || |||||||||||||||||||
Sbjct: 176833 atgaacttccatgttcaactgcatatactttggttagcaggatgggagctctagcaacac 176774
Query: 1578 tgatacagtccctacaccaaaagttataatagatcaagactcagatcctgatgcaactat 1637
||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 176773 tgacacagttcctaccccgaaagttataatagatcaagactcagatccggatgcgaccat 176714
Query: 1638 tgtggaagtaaccttgggtgaccgtcttggggatcttcttgatac 1682
||| || |||| |||||||||||||| || ||||||||||||||
Sbjct: 176713 tgtagagataactttgggtgaccgtctcggtgatcttcttgatac 176669
Score = 159 bits (80), Expect = 9e-35
Identities = 122/136 (89%)
Strand = Plus / Minus
Query: 2901 tgttccatttcagtttacttgttgtggaatcagctgaccgtccagggttgttggttgatc 2960
||||||||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 175439 tgttccatttcagcttacttgtagtggaaacagctgaccgaccaggtttgttggttgacc 175380
Query: 2961 tagttaagatcattgctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 175379 ttgttaagatcattgatgacatcaacatcaccgtccaatctggagaatttgacactgagg 175320
Query: 3021 tgacaccagtcatttg 3036
| |||| | |||||||
Sbjct: 175319 taacactaatcatttg 175304
Score = 117 bits (59), Expect = 3e-22
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 1809 tgtacttttctacacatatcaattcttgtctagaatgagtgacaacaatactctacaggt 1868
||||||||||| ||||||||| |||||| ||||| |||||| |||||| |||||||
Sbjct: 176359 tgtacttttctgcacatatcagttcttgcctaga----gtgacaggaatactgtacaggt 176304
Query: 1869 caactggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatca 1928
| |||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |
Sbjct: 176303 cgactggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataa 176244
Query: 1929 acaacatg 1936
||||||||
Sbjct: 176243 acaacatg 176236
Score = 111 bits (56), Expect = 2e-20
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 3347 caggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggatgccagt 3406
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct: 174982 caggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggagggcagt 174923
Query: 3407 ttctaggcagat 3418
| ||||||||||
Sbjct: 174922 tactaggcagat 174911
Score = 95.6 bits (48), Expect = 1e-15
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1684 atgagtgccctgaggaatttagggttaaatgttgtgaaagctagtgtttgccttgattct 1743
|||| |||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||
Sbjct: 176566 atgaatgccctgaagaatttagggctaaatgttgtgaaagctagcgtctgcctcgattct 176507
Query: 1744 tccggcaagcacaataagtttgctataacaaa 1775
| |||||||| | |||||| |||||||||||
Sbjct: 176506 actggcaagcatattaagttagctataacaaa 176475
Score = 85.7 bits (43), Expect = 1e-12
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 2425 taaatagtttttgcatgtaaatcggcaggttgatgtggacatagcaactcacatagaaat 2484
|||||| ||| ||||||| ||| | ||||||||||||||||||||||| |||||||| ||
Sbjct: 175883 taaatattttctgcatgtgaattgtcaggttgatgtggacatagcaacccacatagacat 175824
Query: 2485 ctatgacgatggtcctgaaagaaggta 2511
||||| ||||| ||||| ||||||||
Sbjct: 175823 atatgatgatggccctgacagaaggta 175797
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 21 gcccacctcccgtttccacctctctatcctatggatagagcctccgcgacaaccatagat 80
||||||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 178432 gcccacctcccattcgcatctcgctatcctatggatagagccgccgcgacagccatagat 178373
Query: 81 atcctcgttatgatcccatcagcgccttctcctt 114
||| |||| |||||||| || ||||||| ||||
Sbjct: 178372 atcgtcgtcatgatcccgtcctcgccttcgcctt 178339
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1952 gaagctagcagtcaattggccatgggtgcaacttttgggctagagccccctacggaagtg 2011
||||||||||| |||||||| |||||||||||||||| | |||||||||||| ||| ||
Sbjct: 176133 gaagctagcagccaattggctctgggtgcaacttttggtccagagccccctacagaactg 176074
Query: 2012 gtact 2016
|||||
Sbjct: 176073 gtact 176069
Score = 60.0 bits (30), Expect = 6e-05
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 3085 tcttgtaggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaa 3144
|||| ||||| ||||| || || |||||||||||||||||||| |||| || ||||| |
Sbjct: 175247 tcttatagggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattga 175188
Query: 3145 tcaaggctttgcaacaggtaaa 3166
|||| || ||||| ||||||||
Sbjct: 175187 tcaaagccttgcagcaggtaaa 175166
>dbj|AP005478.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBb0070J06
Length = 142303
Score = 216 bits (109), Expect = 4e-52
Identities = 196/225 (87%)
Strand = Plus / Minus
Query: 1458 ctagtgctgcttcgcctgcagctgttgaggtagatagcattgcttacgacaaaacattcg 1517
|||| |||||||| |||| ||||| |||||||||||||| |||||| |||||||| |
Sbjct: 7961 ctagagctgcttcctctgcggctgtcgaggtagatagcatagcttacagaaaaacattgg 7902
Query: 1518 atgaacctccatgttcaactgcagatactttgttttgtagaatgggagctctagcaacac 1577
|||||| |||||||||||||||| |||||||| || | || |||||||||||||||||||
Sbjct: 7901 atgaacttccatgttcaactgcatatactttggttagcaggatgggagctctagcaacac 7842
Query: 1578 tgatacagtccctacaccaaaagttataatagatcaagactcagatcctgatgcaactat 1637
||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 7841 tgacacagttcctaccccgaaagttataatagatcaagactcagatccggatgcgaccat 7782
Query: 1638 tgtggaagtaaccttgggtgaccgtcttggggatcttcttgatac 1682
||| || |||| |||||||||||||| || ||||||||||||||
Sbjct: 7781 tgtagagataactttgggtgaccgtctcggtgatcttcttgatac 7737
Score = 159 bits (80), Expect = 9e-35
Identities = 122/136 (89%)
Strand = Plus / Minus
Query: 2901 tgttccatttcagtttacttgttgtggaatcagctgaccgtccagggttgttggttgatc 2960
||||||||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 6507 tgttccatttcagcttacttgtagtggaaacagctgaccgaccaggtttgttggttgacc 6448
Query: 2961 tagttaagatcattgctgacatcaatatcactgtccaatctggagaatttgacaccgagg 3020
| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 6447 ttgttaagatcattgatgacatcaacatcaccgtccaatctggagaatttgacactgagg 6388
Query: 3021 tgacaccagtcatttg 3036
| |||| | |||||||
Sbjct: 6387 taacactaatcatttg 6372
Score = 117 bits (59), Expect = 3e-22
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 1809 tgtacttttctacacatatcaattcttgtctagaatgagtgacaacaatactctacaggt 1868
||||||||||| ||||||||| |||||| ||||| |||||| |||||| |||||||
Sbjct: 7427 tgtacttttctgcacatatcagttcttgcctaga----gtgacaggaatactgtacaggt 7372
Query: 1869 caactggtcgcaaaattgatgacccggagttgttagaagcagtaagactgacaattatca 1928
| |||||||||||||||| ||| || |||||||||||||||||| | ||||||||||| |
Sbjct: 7371 cgactggtcgcaaaattggtgaaccagagttgttagaagcagtacggctgacaattataa 7312
Query: 1929 acaacatg 1936
||||||||
Sbjct: 7311 acaacatg 7304
Score = 111 bits (56), Expect = 2e-20
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 3347 caggttcttgctaatagcttgcgttatttcttgaggaggccgacgacagaggatgccagt 3406
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct: 6050 caggttcttgctaatagcttgcgctatttcttgaggaggccgacgacagaggagggcagt 5991
Query: 3407 ttctaggcagat 3418
| ||||||||||
Sbjct: 5990 tactaggcagat 5979
Score = 95.6 bits (48), Expect = 1e-15
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1684 atgagtgccctgaggaatttagggttaaatgttgtgaaagctagtgtttgccttgattct 1743
|||| |||||||| |||||||||| ||||||||||||||||||| || ||||| ||||||
Sbjct: 7634 atgaatgccctgaagaatttagggctaaatgttgtgaaagctagcgtctgcctcgattct 7575
Query: 1744 tccggcaagcacaataagtttgctataacaaa 1775
| |||||||| | |||||| |||||||||||
Sbjct: 7574 actggcaagcatattaagttagctataacaaa 7543
Score = 85.7 bits (43), Expect = 1e-12
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 2425 taaatagtttttgcatgtaaatcggcaggttgatgtggacatagcaactcacatagaaat 2484
|||||| ||| ||||||| ||| | ||||||||||||||||||||||| |||||||| ||
Sbjct: 6951 taaatattttctgcatgtgaattgtcaggttgatgtggacatagcaacccacatagacat 6892
Query: 2485 ctatgacgatggtcctgaaagaaggta 2511
||||| ||||| ||||| ||||||||
Sbjct: 6891 atatgatgatggccctgacagaaggta 6865
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 21 gcccacctcccgtttccacctctctatcctatggatagagcctccgcgacaaccatagat 80
||||||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 9500 gcccacctcccattcgcatctcgctatcctatggatagagccgccgcgacagccatagat 9441
Query: 81 atcctcgttatgatcccatcagcgccttctcctt 114
||| |||| |||||||| || ||||||| ||||
Sbjct: 9440 atcgtcgtcatgatcccgtcctcgccttcgcctt 9407
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1952 gaagctagcagtcaattggccatgggtgcaacttttgggctagagccccctacggaagtg 2011
||||||||||| |||||||| |||||||||||||||| | |||||||||||| ||| ||
Sbjct: 7201 gaagctagcagccaattggctctgggtgcaacttttggtccagagccccctacagaactg 7142
Query: 2012 gtact 2016
|||||
Sbjct: 7141 gtact 7137
Score = 60.0 bits (30), Expect = 6e-05
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 3085 tcttgtaggggctactagccaaggcaaaattccatgtcagttaccggggcaagccattaa 3144
|||| ||||| ||||| || || |||||||||||||||||||| |||| || ||||| |
Sbjct: 6315 tcttatagggcctactggctaaagcaaaattccatgtcagttataggggtaaaccattga 6256
Query: 3145 tcaaggctttgcaacaggtaaa 3166
|||| || ||||| ||||||||
Sbjct: 6255 tcaaagccttgcagcaggtaaa 6234
>gb|AF325196.1 |AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
LRK19 (Lrk19) genes, complete cds
Length = 35872
Score = 54.0 bits (27), Expect = 0.004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1299 tactccctccatatagaaatataagagcgtttagatcac 1337
||||||||| || |||||||||||||||||||||||||
Sbjct: 21737 tactccctctgtaaagaaatataagagcgtttagatcac 21699
Score = 48.1 bits (24), Expect = 0.23
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1298 ttactccctccatatagaaatataagagcgtttagatcac 1337
|||||||||| || | |||||||||||||||||||||||
Sbjct: 21652 ttactccctctgtaaataaatataagagcgtttagatcac 21691
>gb|AY500541.1 | Pachyella adnata voucher DHP-02.496 (FH) 28S ribosomal RNA gene,
partial sequence
Length = 892
Score = 44.1 bits (22), Expect = 3.6
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3040 ctttacttttattgatataagt 3061
||||||||||||||||||||||
Sbjct: 199 ctttacttttattgatataagt 220
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 757,547,056
Number of extensions: 46183895
Number of successful extensions: 259101
Number of sequences better than 10.0: 71
Number of HSP's gapped: 259095
Number of HSP's successfully gapped: 129
Length of query: 3662
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3638
Effective length of database: 18,499,340,271
Effective search space: 67300599905898
Effective search space used: 67300599905898
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)