ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf10n08 |
|---|---|
| Clone Library Name | barley_pub |
>Q09855:POF11_SCHPO F-box/WD repeat protein pof11 - Schizosaccharomyces pombe (Fission| yeast) Length = 506 Score = 38.9 bits (89), Expect = 0.048 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 448 EITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALY-HKDFTAEQDTITPPNGWK 618 E++ SYLD LC+ + + +R D G WKALY K + ++ + W+ Sbjct: 79 EVSLRVFSYLDQLDLCKCKLMSKRWKRLLEDPGIWKALYMQKGWFVNENVLNEFEAWR 136
>Q00659:SCONB_EMENI Sulfur metabolite repression control protein - Emericella nidulans| (Aspergillus nidulans) Length = 678 Score = 38.1 bits (87), Expect = 0.082 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +1 Query: 439 LVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAW 552 L PEI L YLD TSLC+ S + R A+DD W Sbjct: 184 LPPEIAFKILCYLDTTSLCKASQVSRGWRALADDDVVW 221
>P39014:MET30_YEAST F-box protein MET30 - Saccharomyces cerevisiae (Baker's yeast)| Length = 640 Score = 35.4 bits (80), Expect = 0.53 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +1 Query: 439 LVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQ--DTITPPNG 612 L E++ LSYLDC SLC + ++ A+DD W YH EQ D P G Sbjct: 187 LPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDRVW---YH---MCEQHIDRKCPNCG 240 Query: 613 W 615 W Sbjct: 241 W 241
>Q9JIK1:MUCDL_RAT Mucin and cadherin-like protein precursor - Rattus norvegicus (Rat)| Length = 862 Score = 33.9 bits (76), Expect = 1.6 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 8 WSPTHHTSIRKRKPP*FPHLLPQNPSTAPPSPCDGMPSKPYPQ 136 WSPT + P P L P +P ++ P+P MP P P+ Sbjct: 728 WSPTSNRKPEPGPEPVQPPLRPPSPMSSSPTPPSSMPPSPQPK 770
>O70507:HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 - Mus musculus (Mouse) Length = 1186 Score = 33.9 bits (76), Expect = 1.6 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +2 Query: 47 PP*FPHLLPQNPSTAPPSPCDGMPSKPYPQPLTAAASFT 163 PP LLP + S+ PP C G P P P TAAA+ T Sbjct: 853 PPGLSPLLPSSSSSPPPGAC-GSPPAPTPSTSTAAAAST 890
>Q8SSC4:RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1 - Encephalitozoon| cuniculi Length = 1599 Score = 33.5 bits (75), Expect = 2.0 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +2 Query: 2 GNWSPTH-----HTSIRKRKPP*FPHLLPQNPSTAPPSPCDGMPSKPYPQPLTAAASFTA 166 GNWSPTH + +R P P P +PS +P SP P+ P P + + S T+ Sbjct: 1447 GNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTS 1505
>Q9JKS6:PCLO_RAT Protein piccolo - Rattus norvegicus (Rat)| Length = 5085 Score = 32.7 bits (73), Expect = 3.5 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 71 PQNPSTAPPSPCDGMPSKPYPQPLTAA 151 PQ P+ A P P P+KP PQP T A Sbjct: 427 PQQPAPAKPQPQQPTPAKPQPQPPTPA 453 Score = 32.7 bits (73), Expect = 3.5 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +2 Query: 71 PQNPSTAPPSPCDGMPSKPYPQPLTA 148 PQ P+ A P P P+KP PQP TA Sbjct: 437 PQQPTPAKPQPQPPTPAKPQPQPPTA 462
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 32.7 bits (73), Expect = 3.5 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +2 Query: 44 KPP*FPHLLPQNPSTAPPSPCDGMPSKPYPQP 139 KPP P P+ P PSPC P KP P+P Sbjct: 7 KPP--PKPQPKPPPAPTPSPCPPQPPKPQPKP 36 Score = 32.7 bits (73), Expect = 3.5 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +2 Query: 47 PP*FPHLLPQNPSTAPPSPCDGMPSKPYPQP 139 PP P P+ P PSPC P KP P+P Sbjct: 26 PPQPPKPQPKPPPAPTPSPCPPQPPKPQPKP 56
>Q7TSL3:FBX11_RAT F-box only protein 11 - Rattus norvegicus (Rat)| Length = 843 Score = 32.7 bits (73), Expect = 3.5 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +1 Query: 427 MMEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQDTITPP 606 + E+L E+ SYL LCR + AND WK LY + F + + P Sbjct: 71 LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 130 Query: 607 NG 612 G Sbjct: 131 PG 132
>Q7TPD1:FBX11_MOUSE F-box only protein 11 - Mus musculus (Mouse)| Length = 843 Score = 32.7 bits (73), Expect = 3.5 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +1 Query: 427 MMEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQDTITPP 606 + E+L E+ SYL LCR + AND WK LY + F + + P Sbjct: 71 LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 130 Query: 607 NG 612 G Sbjct: 131 PG 132
>Q86XK2:FBX11_HUMAN F-box only protein 11 - Homo sapiens (Human)| Length = 927 Score = 32.7 bits (73), Expect = 3.5 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +1 Query: 427 MMEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQDTITPP 606 + E+L E+ SYL LCR + AND WK LY + F + + P Sbjct: 155 LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 214 Query: 607 NG 612 G Sbjct: 215 PG 216
>P37370:VRP1_YEAST Verprolin - Saccharomyces cerevisiae (Baker's yeast)| Length = 817 Score = 32.3 bits (72), Expect = 4.5 Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 2/101 (1%) Frame = +2 Query: 59 PHLLPQNPSTA--PPSPCDGMPSKPYPQPLTAAASFTATWMSAWTXXXXXXXXXXXXXXX 232 P L P P+T PP+ MP+ P P P A T++ +SA + Sbjct: 375 PTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSASSIPL------------ 422 Query: 233 XXXXXXHSAPLPPLPPRSTFLHXXXXXXXXXXTQIPLSPAP 355 APLPP PP S T +P +P P Sbjct: 423 --------APLPPPPPPSV------------ATSVPSAPPP 443
>Q9P7W4:POF10_SCHPO F-box/WD repeat protein pof10 - Schizosaccharomyces pombe (Fission| yeast) Length = 662 Score = 32.0 bits (71), Expect = 5.9 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Frame = +1 Query: 439 LVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQDTITPPNG-- 612 L EI S+LD SL T ++ +DD +W+ + F +Q I P G Sbjct: 34 LPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTAFFHHFAGDQSQIFSPLGNG 93 Query: 613 -WKAYYAATKAI 645 W+ Y I Sbjct: 94 TWRQEYLLRSTI 105
>Q8C2S5:FBXL5_MOUSE F-box/LRR-repeat protein 5 - Mus musculus (Mouse)| Length = 690 Score = 32.0 bits (71), Expect = 5.9 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 439 LVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALY 564 L PE+ SYL+ LCR S ++ + A WK LY Sbjct: 208 LPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHLY 249
>Q9NRD0:FBX8_HUMAN F-box only protein 8 - Homo sapiens (Human)| Length = 319 Score = 32.0 bits (71), Expect = 5.9 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 430 MEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKAL 561 +E L PE++ LSYL+ T LC + + + AND+ W+ L Sbjct: 71 LEMLPPELSFTILSYLNATDLC---LASCVWQDLANDELLWQGL 111
>Q5E9G6:FBX8_BOVIN F-box only protein 8 - Bos taurus (Bovine)| Length = 319 Score = 32.0 bits (71), Expect = 5.9 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 430 MEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKAL 561 +E L PE++ LSYL+ T LC + + + AND+ W+ L Sbjct: 71 LEMLPPELSFTILSYLNATDLC---LASCVWQDLANDELLWQGL 111
>Q9UKB1:FBW1B_HUMAN F-box/WD repeat protein 11 - Homo sapiens (Human)| Length = 542 Score = 32.0 bits (71), Expect = 5.9 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Frame = +1 Query: 424 SMMEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRAANDDGAWKALYHKDFTAEQ--DTI 597 ++ EQ + I + LSYLD SLC + +R ++ WK L + + + Sbjct: 122 ALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGL 181 Query: 598 TPPNGWKAY 624 + GW Y Sbjct: 182 SERRGWDQY 190
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 31.6 bits (70), Expect = 7.7 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 47 PP*FPHLLPQNPSTAPPSPCDGMPSKPYPQPLTAAA 154 PP P P+ P PSPC P KP P+P+ A Sbjct: 91 PP--PKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPA 124
>Q3SYW0:FBX15_BOVIN F-box only protein 15 - Bos taurus (Bovine)| Length = 466 Score = 31.6 bits (70), Expect = 7.7 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = +1 Query: 355 SGEMAVGGEMNKXXXXXXXTTGASM-MEQLVPEITTHALSYLDCTSLCRLSMTNSAMRRA 531 +G A+ + +TG S ++ L E+ LSYLD +L N Sbjct: 4 AGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHL 63 Query: 532 ANDDGAWKALYHKDFT 579 AND+ W +Y F+ Sbjct: 64 ANDNFIWIRIYSTAFS 79 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 221,116,602 Number of extensions: 4794631 Number of successful extensions: 15026 Number of sequences better than 10.0: 19 Number of HSP's gapped: 14818 Number of HSP's successfully gapped: 21 Length of query: 438 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 322 Effective length of database: 68,868,219 Effective search space: 22175566518 Effective search space used: 22175566518 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
