ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2f18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059766.1| Oryza sativa (japonica cultivar-group) Os04g0501700 (Os04g0501700) mRNA, complete cds Length = 2584 Score = 1927 bits (972), Expect = 0.0 Identities = 1655/1883 (87%), Gaps = 6/1883 (0%) Strand = Plus / Plus Query: 32 atggatcccgcgccggcgacccctcgctggaacctggagcgcccctacctcaccggacgg 91 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 94 atggatcccgcgccggcgacccctcgctggaacctggagcggccgtacctcaccggccgc 153 Query: 92 ttccaccaggaggcgaaggtgtccgcggcgtcgcaggcgcccggatccaagcctttctct 151 ||||| |||||||| |||||| | |||||| |||||| | ||||||||||||||| ||| Sbjct: 154 ttccatcaggaggccaaggtggctgcggcggcgcagggggccggatccaagccttactcc 213 Query: 152 atcgactccttcagccgcggagctggcggcggcg------ctgggagtgtcctcgggtcg 205 ||||||||||||||||||| | |||||||||| ||| ||||||| |||| ||| Sbjct: 214 ctcgactccttcagccgcggcggcggcggcggcggcggcgctgagagtgtcatcggatcg 273 Query: 206 tacgctgtttctgtgcaggagcttttagttattgatgatttgctatcagctctgctgggt 265 ||||| || || |||||||||||||| || |||||||||||| |||||||||| ||||| Sbjct: 274 tacgccgtctcagtgcaggagcttttggtcattgatgatttgttatcagctcttgtgggt 333 Query: 266 attgagggaagatacatttccattaagagagtacgcggaaaggagggatatgttgtcttc 325 ||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 334 attgagggacgatacatttcgattaagagagtacggggaaaggaggggtatgttgtcttc 393 Query: 326 cagattgattcttcaatggaccttgcactccaggagttgactcgtcgaattttcccctta 385 ||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 394 cagattgattcttcaatggaccttgcactccaggaattaactcgtcggatttttccctta 453 Query: 386 tgtgaagatttcgtgctagcaagccagtttgtggagtccaggtcacatttcaaaaatggt 445 ||||| ||||| || | | | ||| |||||||||||||| ||||||||||| | ||| Sbjct: 454 tgtgaggattttgtcttggtataccattttgtggagtccagatcacatttcaagagtggc 513 Query: 446 ttggtcaaccatgctctagcggcagctctaagggcattcctcctggattatcaggcaatg 505 ||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||| Sbjct: 514 ctggtcaaccatgctctagctgcagcattgagggcattcctcttggattatcaggcaatg 573 Query: 506 gttgctcaactggagcatcaattccgttttggaaggctctctgttcaaggattatggttc 565 ||||||||||||||||| || |||||| |||| || || || ||||||||||| |||||| Sbjct: 574 gttgctcaactggagcaccagttccgtcttgggagactgtcagttcaaggattgtggttc 633 Query: 566 ttttgtcagcggatgatgagttcattgaatgcactggctgttctaatagagaaggctatg 625 ||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 634 ttttgtcagaggatgatgagttcattgaacgcacttgctgttctagtcgagaaagctatc 693 Query: 626 tccaataatactagtggttcggcgacacttaatctacttcatagtcaggcaaaggcgatg 685 |||||||| || |||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 694 tccaataacaccagtggttctgctacacttaatctacttcaaagtcaggcaaaggcaatg 753 Query: 686 tctggcgatagtgctgttcggtcattactggagaagatgaccgattgtgcaagtgcagca 745 ||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 754 gctggcgatagtgctgttcgatcattactggagaagatgacagagtgtgcaagtgcagcg 813 Query: 746 tacctcaggatgttggagagatgggtgtatgagggtgtcatagatgacccttatggtgaa 805 || || |||||||| || || ||||| |||||||| || |||||||| |||||||||||| Sbjct: 814 tatcttaggatgttagaaaggtgggtctatgagggcgttatagatgatccttatggtgaa 873 Query: 806 ttcttcattgctgaaaacaaatctctgcagaaggagagtctcactcaggattatgatgcc 865 ||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||| Sbjct: 874 ttcttcattgctgaaaacaaatccttgcagaaggagagccttactcaagattatgatgct 933 Query: 866 aaatattggcagcaacggtacagcctaaaagatggcatccctagttttctcaataatgtt 925 ||||||||||||||| | ||||| ||||||||||||||||||||||| || | |||||| Sbjct: 934 aaatattggcagcaaagatacagtctaaaagatggcatccctagtttccttaccaatgtt 993 Query: 926 gccgccaccattctaacaacaggaaagtatcttaatgtcatgagagaatgtgggcacaat 985 |||||||| || || ||||| ||||| ||||||||||| ||||||||||||| | ||| | Sbjct: 994 gccgccacaatactgacaactggaaaatatcttaatgttatgagagaatgtgagtacact 1053 Query: 986 gttcaggtttccctgtcagaaaactctaagctgacgagctttggttcaaaccaccaatat 1045 || |||||| || ||||||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 1054 gtccaggttcccttgtcagagagttctaagctgatgggctttggttcaaaccaccaatat 1113 Query: 1046 cttgagtgcatcaaatctgcttatgattttgcaagtggtgagctcttgactctaatgaaa 1105 ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct: 1114 cttgaatgcatcaaatctgcgtatgactttgcaagtggtgaactcttgactctaatgaaa 1173 Query: 1106 gataagtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaa 1165 |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 1174 gataagtatgatctcattgggaaactgcgatccctcaagcgatatctacttcttgaccaa 1233 Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaa 1225 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 ggtgattttctggttcactttatggatattgcccgagaggagcttacaaagaaaccagaa 1293 Query: 1226 gatatatccgttgaaaaacttcagtctcttgttgacattgcgttgcgaagtacagcagct 1285 || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1294 gaaatatctgttgaaaaacttcagtctcttgttgacatcgcgttgcgaagtacggcagct 1353 Query: 1286 gcttctgatccaagtcatgaagatttgacttgttgtgttgaaagaagttccctgcttaaa 1345 ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1354 gcttcagatccaagtcatgaagacttgacttgctgtgtggaaagaagttccctccttaag 1413 Query: 1346 aagctgacaaccttgaaagacctggactgtgcttactcttcagacaagcttgccgcagct 1405 || ||| ||| |||||||| |||| ||||| || ||||||||||||||| |||||| Sbjct: 1414 aaattgagcaccctgaaagacttggattgtgcatatccttcagacaagcttgtggcagct 1473 Query: 1406 gatgttgatcagcccgtgacattaaacataactggcttggaaacattctgccttggctac 1465 |||||||| || ||| || | |||| | |||||||||||||| |||||||| ||||| Sbjct: 1474 gatgttgaccatcccatgccgttaagtgtgactggcttggaaactttctgcctgagctac 1533 Query: 1466 aagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtaccaattg 1525 ||| ||| ||||||||||||||| ||||||||||| || |||| ||||| ||||| ||| Sbjct: 1534 aaggttcaatggccactatctctagtaatttcaagaaaatctttgacaaaataccagttg 1593 Query: 1526 atctttcgtctattgtttcactgcaaacatgttagtcgccaattgtgtcaagcgtggcag 1585 || ||||| || ||||| |||||||| ||||||||||| ||||||||| ||| ||||| Sbjct: 1594 atttttcggctgttgttccactgcaagcatgttagtcgacaattgtgtacagcatggcaa 1653 Query: 1586 atccaacaaggcttccggtctgtcaagattcttggaacgccaattctacggtcatcaatt 1645 || |||||||| ||||| |||||||| || || ||||| ||| | ||||||||||||||| Sbjct: 1654 attcaacaaggtttccgttctgtcaaaatcctaggaacaccagtcctacggtcatcaatt 1713 Query: 1646 ctttgtcgcagcatgctcaagtttgtaaacagccttctacattatctaacttttgaggtt 1705 ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1714 ctttgccgcagcatgctcaagtttgtaaacagccttttacattatctaacctttgaggtt 1773 Query: 1706 cttgaaccaaactggcattcaatgcatggccgccttcaaactgcaaggagcatcgatgag 1765 ||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||| Sbjct: 1774 cttgaaccaaattggcatttgatgcatgatcggcttcaaactgcaaggagcatagatgag 1833 Query: 1766 gtcatccagatacacgatttcttcctccagaagtgtctaaaagaatgcttgctgttgttg 1825 ||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1834 gtcatacagattcatgatttcttcctgcagaagtgtctaaaagaatgcttattgttgttg 1893 Query: 1826 cctgagctcctcatgaaagttgagaagctgaaagcattatgcctccaatacgcgacctcc 1885 ||||| ||||| ||||| | |||||||||||||| | || ||||| || ||||| ||| Sbjct: 1894 cctgaactccttgtgaaaatcgagaagctgaaagctctgtgtctccagtatgcgacttcc 1953 Query: 1886 atccagctcttgataccgtccat 1908 |||||||| |||||||| ||||| Sbjct: 1954 atccagctattgataccatccat 1976 Score = 54.0 bits (27), Expect = 0.003 Identities = 129/163 (79%) Strand = Plus / Plus Query: 1977 acagagacgagcaactgaagctagcatcggagaacgccgtgatgtcacagtcaatcctga 2036 |||||| | |||||||||| | |||||||| || | || |||||| |||||||| ||| Sbjct: 2045 acagaggccagcaactgaaattggcatcggaaaatgttgtaatgtcagagtcaatcttga 2104 Query: 2037 agttcgagtcggagttcaatgcggagctccagagcctagttcctacgctgagcaagagct 2096 | |||||| | || |||||| | ||||| || || || ||||||||||||| || || | Sbjct: 2105 aattcgaggcagaattcaattcagagcttcaaagtcttattcctacgctgagtaacagtt 2164 Query: 2097 cgcaggccgagccgtacctgacccatctcgcgcagtgcattct 2139 | ||||| || || ||| |||| ||||| | |||||||||||| Sbjct: 2165 cacaggcagaaccatacttgactcatcttgggcagtgcattct 2207
>dbj|AK103837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148G19, full insert sequence Length = 2585 Score = 1919 bits (968), Expect = 0.0 Identities = 1654/1883 (87%), Gaps = 6/1883 (0%) Strand = Plus / Plus Query: 32 atggatcccgcgccggcgacccctcgctggaacctggagcgcccctacctcaccggacgg 91 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 95 atggatcccgcgccggcgacccctcgctggaacctggagcggccgtacctcaccggccgc 154 Query: 92 ttccaccaggaggcgaaggtgtccgcggcgtcgcaggcgcccggatccaagcctttctct 151 ||||| |||||||| |||||| | |||||| |||||| | ||||||||||||||| ||| Sbjct: 155 ttccatcaggaggccaaggtggctgcggcggcgcagggggccggatccaagccttactcc 214 Query: 152 atcgactccttcagccgcggagctggcggcggcg------ctgggagtgtcctcgggtcg 205 ||||||||||||||||||| | |||||||||| ||| ||||||| |||| ||| Sbjct: 215 ctcgactccttcagccgcggcggcggcggcggcggcggcgctgagagtgtcatcggatcg 274 Query: 206 tacgctgtttctgtgcaggagcttttagttattgatgatttgctatcagctctgctgggt 265 ||||| || || |||||||||||||| || |||||||||||| |||||||||| ||||| Sbjct: 275 tacgccgtctcagtgcaggagcttttggtcattgatgatttgttatcagctcttgtgggt 334 Query: 266 attgagggaagatacatttccattaagagagtacgcggaaaggagggatatgttgtcttc 325 ||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 335 attgagggacgatacatttcgattaagagagtacggggaaaggaggggtatgttgtcttc 394 Query: 326 cagattgattcttcaatggaccttgcactccaggagttgactcgtcgaattttcccctta 385 ||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 395 cagattgattcttcaatggaccttgcactccaggaattaactcgtcggatttttccctta 454 Query: 386 tgtgaagatttcgtgctagcaagccagtttgtggagtccaggtcacatttcaaaaatggt 445 ||||| ||||| || | | | ||| |||||||||||||| ||||||||||| | ||| Sbjct: 455 tgtgaggattttgtcttggtataccattttgtggagtccagatcacatttcaagagtggc 514 Query: 446 ttggtcaaccatgctctagcggcagctctaagggcattcctcctggattatcaggcaatg 505 ||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||| Sbjct: 515 ctggtcaaccatgctctagctgcagcattgagggcattcctcttggattatcaggcaatg 574 Query: 506 gttgctcaactggagcatcaattccgttttggaaggctctctgttcaaggattatggttc 565 ||||||||||||||||| || |||||| |||| || || || ||||||||||| |||||| Sbjct: 575 gttgctcaactggagcaccagttccgtcttgggagactgtcagttcaaggattgtggttc 634 Query: 566 ttttgtcagcggatgatgagttcattgaatgcactggctgttctaatagagaaggctatg 625 ||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 635 ttttgtcagaggatgatgagttcattgaacgcacttgctgttctagtcgagaaagctatc 694 Query: 626 tccaataatactagtggttcggcgacacttaatctacttcatagtcaggcaaaggcgatg 685 |||||||| || |||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 695 tccaataacaccagtggttctgctacacttaatctacttcaaagtcaggcaaaggcaatg 754 Query: 686 tctggcgatagtgctgttcggtcattactggagaagatgaccgattgtgcaagtgcagca 745 ||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 755 gctggcgatagtgctgttcgatcattactggagaagatgacagagtgtgcaagtgcagcg 814 Query: 746 tacctcaggatgttggagagatgggtgtatgagggtgtcatagatgacccttatggtgaa 805 || || |||||||| || || ||||| |||||||| || |||||||| |||||||||||| Sbjct: 815 tatcttaggatgttagaaaggtgggtctatgagggcgttatagatgatccttatggtgaa 874 Query: 806 ttcttcattgctgaaaacaaatctctgcagaaggagagtctcactcaggattatgatgcc 865 ||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||| Sbjct: 875 ttcttcattgctgaaaacaaatccttgcagaaggagagccttactcaagattatgatgct 934 Query: 866 aaatattggcagcaacggtacagcctaaaagatggcatccctagttttctcaataatgtt 925 ||||||||||||||| | ||||| ||||||||||||||||||||||| || | |||||| Sbjct: 935 aaatattggcagcaaagatacagtctaaaagatggcatccctagtttccttaccaatgtt 994 Query: 926 gccgccaccattctaacaacaggaaagtatcttaatgtcatgagagaatgtgggcacaat 985 |||||||| || || ||||| ||||| ||||||||||| ||||||||||||| | ||| | Sbjct: 995 gccgccacaatactgacaactggaaaatatcttaatgttatgagagaatgtgagtacact 1054 Query: 986 gttcaggtttccctgtcagaaaactctaagctgacgagctttggttcaaaccaccaatat 1045 || |||||| || ||||||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 1055 gtccaggttcccttgtcagagagttctaagctgatgggctttggttcaaaccaccaatat 1114 Query: 1046 cttgagtgcatcaaatctgcttatgattttgcaagtggtgagctcttgactctaatgaaa 1105 ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct: 1115 cttgaatgcatcaaatctgcgtatgactttgcaagtggtgaactcttgactctaatgaaa 1174 Query: 1106 gataagtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaa 1165 |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 1175 gataagtatgatctcattgggaaactgcgatccctcaagcgatatctacttcttgaccaa 1234 Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaa 1225 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 ggtgattttctggttcactttatggatattgcccgagaggagcttacaaagaaaccagaa 1294 Query: 1226 gatatatccgttgaaaaacttcagtctcttgttgacattgcgttgcgaagtacagcagct 1285 || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1295 gaaatatctgttgaaaaacttcagtctcttgttgacatcgcgttgcgaagtacggcagct 1354 Query: 1286 gcttctgatccaagtcatgaagatttgacttgttgtgttgaaagaagttccctgcttaaa 1345 ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1355 gcttcagatccaagtcatgaagacttgacttgctgtgtggaaagaagttccctccttaag 1414 Query: 1346 aagctgacaaccttgaaagacctggactgtgcttactcttcagacaagcttgccgcagct 1405 || ||| ||| |||||||| |||| ||||| || ||||||||||||||| |||||| Sbjct: 1415 aaattgagcaccctgaaagacttggattgtgcatatccttcagacaagcttgtggcagct 1474 Query: 1406 gatgttgatcagcccgtgacattaaacataactggcttggaaacattctgccttggctac 1465 |||||||| || ||| || | |||| | |||||||||||||| |||||||| ||||| Sbjct: 1475 gatgttgaccatcccatgccgttaagtgtgactggcttggaaactttctgcctgagctac 1534 Query: 1466 aagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtaccaattg 1525 ||| ||| ||||||||||||||| ||||||||||| || |||| ||||| ||||| ||| Sbjct: 1535 aaggttcaatggccactatctctagtaatttcaagaaaatctttgacaaaataccagttg 1594 Query: 1526 atctttcgtctattgtttcactgcaaacatgttagtcgccaattgtgtcaagcgtggcag 1585 || ||||| || ||||| |||||||| ||||||||||| ||||||||| ||| ||||| Sbjct: 1595 atttttcggctgttgttccactgcaagcatgttagtcgacaattgtgtacagcatggcaa 1654 Query: 1586 atccaacaaggcttccggtctgtcaagattcttggaacgccaattctacggtcatcaatt 1645 || |||||||| ||||| |||||||| || || ||||| ||| | ||||||||||||||| Sbjct: 1655 attcaacaaggtttccgttctgtcaaaatcctaggaacaccagtcctacggtcatcaatt 1714 Query: 1646 ctttgtcgcagcatgctcaagtttgtaaacagccttctacattatctaacttttgaggtt 1705 ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1715 ctttgccgcagcatgctcaagtttgtaaacagccttttacattatctaacctttgaggtt 1774 Query: 1706 cttgaaccaaactggcattcaatgcatggccgccttcaaactgcaaggagcatcgatgag 1765 ||||||||||| ||||||| ||||||| || ||||||||||||||||| || |||||| Sbjct: 1775 cttgaaccaaattggcatttgatgcatgatcggcttcaaactgcaaggagtatagatgag 1834 Query: 1766 gtcatccagatacacgatttcttcctccagaagtgtctaaaagaatgcttgctgttgttg 1825 ||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1835 gtcatacagattcatgatttcttcctgcagaagtgtctaaaagaatgcttattgttgttg 1894 Query: 1826 cctgagctcctcatgaaagttgagaagctgaaagcattatgcctccaatacgcgacctcc 1885 ||||| ||||| ||||| | |||||||||||||| | || ||||| || ||||| ||| Sbjct: 1895 cctgaactccttgtgaaaatcgagaagctgaaagctctgtgtctccagtatgcgacttcc 1954 Query: 1886 atccagctcttgataccgtccat 1908 |||||||| |||||||| ||||| Sbjct: 1955 atccagctattgataccatccat 1977 Score = 54.0 bits (27), Expect = 0.003 Identities = 129/163 (79%) Strand = Plus / Plus Query: 1977 acagagacgagcaactgaagctagcatcggagaacgccgtgatgtcacagtcaatcctga 2036 |||||| | |||||||||| | |||||||| || | || |||||| |||||||| ||| Sbjct: 2046 acagaggccagcaactgaaattggcatcggaaaatgttgtaatgtcagagtcaatcttga 2105 Query: 2037 agttcgagtcggagttcaatgcggagctccagagcctagttcctacgctgagcaagagct 2096 | |||||| | || |||||| | ||||| || || || ||||||||||||| || || | Sbjct: 2106 aattcgaggcagaattcaattcagagcttcaaagtcttattcctacgctgagtaacagtt 2165 Query: 2097 cgcaggccgagccgtacctgacccatctcgcgcagtgcattct 2139 | ||||| || || ||| |||| ||||| | |||||||||||| Sbjct: 2166 cacaggcagaaccatacttgactcatcttgggcagtgcattct 2208
>emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0311C03, complete sequence Length = 82144 Score = 208 bits (105), Expect = 7e-50 Identities = 132/141 (93%) Strand = Plus / Plus Query: 219 tgcaggagcttttagttattgatgatttgctatcagctctgctgggtattgagggaagat 278 ||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 54491 tgcaggagcttttggtcattgatgatttgttatcagctcttgtgggtattgagggacgat 54550 Query: 279 acatttccattaagagagtacgcggaaaggagggatatgttgtcttccagattgattctt 338 ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 54551 acatttcgattaagagagtacggggaaaggaggggtatgttgtcttccagattgattctt 54610 Query: 339 caatggaccttgcactccagg 359 ||||||||||||||||||||| Sbjct: 54611 caatggaccttgcactccagg 54631 Score = 155 bits (78), Expect = 9e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 1010 tctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatctgcttat 1069 |||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 56429 tctaagctgatgggctttggttcaaaccaccaatatcttgaatgcatcaaatctgcgtat 56488 Query: 1070 gattttgcaagtggtgagctcttgactctaatgaaagataag 1111 || |||||||||||||| |||||||||||||||||||||||| Sbjct: 56489 gactttgcaagtggtgaactcttgactctaatgaaagataag 56530 Score = 145 bits (73), Expect = 9e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 837 aggagagtctcactcaggattatgatgccaaatattggcagcaacggtacagcctaaaag 896 ||||||| || ||||| ||||||||||| ||||||||||||||| | ||||| ||||||| Sbjct: 56164 aggagagccttactcaagattatgatgctaaatattggcagcaaagatacagtctaaaag 56223 Query: 897 atggcatccctagttttctcaataatgttgccgccaccattctaacaacaggaaagtatc 956 |||||||||||||||| || | |||||||||||||| || || ||||| ||||| |||| Sbjct: 56224 atggcatccctagtttccttaccaatgttgccgccacaatactgacaactggaaaatatc 56283 Query: 957 ttaatgtcatgagagaatgtg 977 ||||||| ||||||||||||| Sbjct: 56284 ttaatgttatgagagaatgtg 56304 Score = 135 bits (68), Expect = 9e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaa 1225 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 56878 ggtgattttctggttcactttatggatattgcccgagaggagcttacaaagaaaccagaa 56937 Query: 1226 gatatatccgttgaaaaacttcag 1249 || ||||| ||||||||||||||| Sbjct: 56938 gaaatatctgttgaaaaacttcag 56961 Score = 133 bits (67), Expect = 3e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 1598 ttccggtctgtcaagattcttggaacgccaattctacggtcatcaattctttgtcgcagc 1657 ||||| |||||||| || || ||||| ||| | |||||||||||||||||||| |||||| Sbjct: 57709 ttccgttctgtcaaaatcctaggaacaccagtcctacggtcatcaattctttgccgcagc 57768 Query: 1658 atgctcaagtttgtaaacagccttctacattatctaacttttgaggt 1704 |||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 57769 atgctcaagtttgtaaacagccttttacattatctaacctttgaggt 57815 Score = 113 bits (57), Expect = 3e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 566 ttttgtcagcggatgatgagttcattgaatgcactggctgttctaatagagaaggctatg 625 ||||| ||| ||||||||||||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 55319 ttttggcagaggatgatgagttcattgaacgcacttgctgttctagtcgagaaagctatc 55378 Query: 626 tccaataatactagtggttcggcgacacttaatctacttcatagtcagg 674 |||||||| || |||||||| || ||||||||||||||||| ||||||| Sbjct: 55379 tccaataacaccagtggttctgctacacttaatctacttcaaagtcagg 55427 Score = 113 bits (57), Expect = 3e-21 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1247 cagtctcttgttgacattgcgttgcgaagtacagcagctgcttctgatccaagtcatgaa 1306 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 57118 cagtctcttgttgacatcgcgttgcgaagtacggcagctgcttcagatccaagtcatgaa 57177 Query: 1307 gatttgacttgttgtgt 1323 || |||||||| ||||| Sbjct: 57178 gacttgacttgctgtgt 57194 Score = 111 bits (56), Expect = 1e-20 Identities = 80/88 (90%) Strand = Plus / Plus Query: 672 aggcaaaggcgatgtctggcgatagtgctgttcggtcattactggagaagatgaccgatt 731 |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 55680 aggcaaaggcaatggctggcgatagtgctgttcgatcattactggagaagatgacagagt 55739 Query: 732 gtgcaagtgcagcatacctcaggatgtt 759 ||||||||||||| || || |||||||| Sbjct: 55740 gtgcaagtgcagcgtatcttaggatgtt 55767 Score = 107 bits (54), Expect = 2e-19 Identities = 105/122 (86%) Strand = Plus / Plus Query: 1474 atggccactatctcttgtaatttcaaggaaggctttaacaaagtaccaattgatctttcg 1533 ||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 57499 atggccactatctctagtaatttcaagaaaagctttgacaaaataccagttgatttttcg 57558 Query: 1534 tctattgtttcactgcaaacatgttagtcgccaattgtgtcaagcgtggcagatccaaca 1593 || ||||| |||||||| ||||||||||| ||||||||| ||| ||||| || ||||| Sbjct: 57559 gctgttgttccactgcaagcatgttagtcgacaattgtgtacagcatggcaaattcaaca 57618 Query: 1594 ag 1595 || Sbjct: 57619 ag 57620 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 490 ggattatcaggcaatggttgctcaactggagcatcaattccgttttggaaggctctctgt 549 ||||||||||||||||||||||||||||||||| || |||||| |||| || || || || Sbjct: 55159 ggattatcaggcaatggttgctcaactggagcaccagttccgtcttgggagactgtcagt 55218 Query: 550 tcaaggattatggttcttttgtcag 574 ||||||||| ||||||||||||||| Sbjct: 55219 tcaaggattgtggttcttttgtcag 55243 Score = 99.6 bits (50), Expect = 5e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 32 atggatcccgcgccggcgacccctcgctggaacctggagcgcccctacctcaccggacgg 91 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 53432 atggatcccgcgccggcgacccctcgctggaacctggagcggccgtacctcaccggccgc 53491 Query: 92 ttccaccagg 101 ||||| |||| Sbjct: 53492 ttccatcagg 53501 Score = 91.7 bits (46), Expect = 1e-14 Identities = 67/74 (90%) Strand = Plus / Plus Query: 1764 aggtcatccagatacacgatttcttcctccagaagtgtctaaaagaatgcttgctgttgt 1823 ||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 58028 aggtcatacagattcatgatttcttcctgcagaagtgtctaaaagaatgcttattgttgt 58087 Query: 1824 tgcctgagctcctc 1837 ||||||| |||||| Sbjct: 58088 tgcctgaactcctc 58101 Score = 89.7 bits (45), Expect = 5e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 767 tgggtgtatgagggtgtcatagatgacccttatggtgaattcttcattgctgaaaacaaa 826 ||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 55971 tgggtctatgagggcgttatagatgatccttacggtgaattcttcattgctgaaaacaaa 56030 Query: 827 tctctgcagaagg 839 || ||||||||| Sbjct: 56031 tccttgcagaagg 56043 Score = 87.7 bits (44), Expect = 2e-13 Identities = 110/132 (83%) Strand = Plus / Plus Query: 356 caggagttgactcgtcgaattttccccttatgtgaagatttcgtgctagcaagccagttt 415 ||||| || |||||||||||||| ||||||||||| ||||| || | | | ||| ||| Sbjct: 54716 caggaattaactcgtcgaatttttcccttatgtgaggattttgtcttggtataccatttt 54775 Query: 416 gtggagtccaggtcacatttcaaaaatggtttggtcaaccatgctctagcggcagctcta 475 ||||||||||| ||||||||||| | ||| |||||||||||||||| || ||||| | Sbjct: 54776 gtggagtccagatcacatttcaagagtggcctggtcaaccatgctctcgctgcagcattg 54835 Query: 476 agggcattcctc 487 |||||||||||| Sbjct: 54836 agggcattcctc 54847 Score = 81.8 bits (41), Expect = 1e-11 Identities = 53/57 (92%) Strand = Plus / Plus Query: 1110 agtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaag 1166 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct: 56614 agtatgatctcattgggaaactgcgatccctcaagcgatatctacttcttgaccaag 56670 Score = 79.8 bits (40), Expect = 4e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 1325 gaaagaagttccctgcttaaaaagctgacaaccttgaaagacctggactgtgcttactct 1384 |||||||||||||| ||||| || ||| ||| |||||||| |||| ||||| || || Sbjct: 57275 gaaagaagttccctccttaagaaattgagcaccctgaaagacttggattgtgcatatcct 57334 Query: 1385 tcagacaagcttgccgcagctgatgttgatcagcccgtgacattaaacataactggcttg 1444 ||||||||||||| |||||||||||||| || ||| || | |||| | ||||||||| Sbjct: 57335 tcagacaagcttgtggcagctgatgttgaccatcccatgccgttaagtgtgactggcttg 57394 Query: 1445 gaaacattctgccttggctacaag 1468 ||||| |||||||| |||||||| Sbjct: 57395 gaaactttctgcctgagctacaag 57418 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1701 aggttcttgaaccaaactggcattcaatgcatggccgccttcaaactgcaaggagcatcg 1760 |||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| | Sbjct: 57886 aggttcttgaaccaaattggcatttgatgcatgatcggcttcaaactgcaaggagcatag 57945 Query: 1761 atgaggt 1767 ||||||| Sbjct: 57946 atgaggt 57952 Score = 63.9 bits (32), Expect = 3e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 98 caggaggcgaaggtgtccgcggcgtcgcaggcgcccggatccaagcctttctctatcgac 157 |||||||| |||||| | |||||| |||||| | ||||||||||||||| ||| ||||| Sbjct: 53601 caggaggccaaggtggctgcggcggcgcagggggccggatccaagccttactccctcgac 53660 Query: 158 tccttcag 165 |||||||| Sbjct: 53661 tccttcag 53668 Score = 52.0 bits (26), Expect = 0.010 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1847 gagaagctgaaagcattatgcctccaatacgcgacctccatccagctcttgataccgtcc 1906 |||||||||||||| | || ||||| || ||||| ||||||||||| |||||||| ||| Sbjct: 58605 gagaagctgaaagctctgtgtctccagtatgcgacttccatccagctattgataccatcc 58664 Query: 1907 at 1908 || Sbjct: 58665 at 58666 Score = 50.1 bits (25), Expect = 0.039 Identities = 43/49 (87%) Strand = Plus / Plus Query: 176 ggcggcggcgctgggagtgtcctcgggtcgtacgctgtttctgtgcagg 224 ||||||||||||| ||||||| |||| |||||||| || || ||||||| Sbjct: 53780 ggcggcggcgctgagagtgtcatcggatcgtacgccgtctcagtgcagg 53828
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 208 bits (105), Expect = 7e-50 Identities = 132/141 (93%) Strand = Plus / Plus Query: 219 tgcaggagcttttagttattgatgatttgctatcagctctgctgggtattgagggaagat 278 ||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 145386 tgcaggagcttttggtcattgatgatttgttatcagctcttgtgggtattgagggacgat 145445 Query: 279 acatttccattaagagagtacgcggaaaggagggatatgttgtcttccagattgattctt 338 ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 145446 acatttcgattaagagagtacggggaaaggaggggtatgttgtcttccagattgattctt 145505 Query: 339 caatggaccttgcactccagg 359 ||||||||||||||||||||| Sbjct: 145506 caatggaccttgcactccagg 145526 Score = 155 bits (78), Expect = 9e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 1010 tctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatctgcttat 1069 |||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 147324 tctaagctgatgggctttggttcaaaccaccaatatcttgaatgcatcaaatctgcgtat 147383 Query: 1070 gattttgcaagtggtgagctcttgactctaatgaaagataag 1111 || |||||||||||||| |||||||||||||||||||||||| Sbjct: 147384 gactttgcaagtggtgaactcttgactctaatgaaagataag 147425 Score = 145 bits (73), Expect = 9e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 837 aggagagtctcactcaggattatgatgccaaatattggcagcaacggtacagcctaaaag 896 ||||||| || ||||| ||||||||||| ||||||||||||||| | ||||| ||||||| Sbjct: 147059 aggagagccttactcaagattatgatgctaaatattggcagcaaagatacagtctaaaag 147118 Query: 897 atggcatccctagttttctcaataatgttgccgccaccattctaacaacaggaaagtatc 956 |||||||||||||||| || | |||||||||||||| || || ||||| ||||| |||| Sbjct: 147119 atggcatccctagtttccttaccaatgttgccgccacaatactgacaactggaaaatatc 147178 Query: 957 ttaatgtcatgagagaatgtg 977 ||||||| ||||||||||||| Sbjct: 147179 ttaatgttatgagagaatgtg 147199 Score = 135 bits (68), Expect = 9e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaa 1225 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147773 ggtgattttctggttcactttatggatattgcccgagaggagcttacaaagaaaccagaa 147832 Query: 1226 gatatatccgttgaaaaacttcag 1249 || ||||| ||||||||||||||| Sbjct: 147833 gaaatatctgttgaaaaacttcag 147856 Score = 133 bits (67), Expect = 3e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 1598 ttccggtctgtcaagattcttggaacgccaattctacggtcatcaattctttgtcgcagc 1657 ||||| |||||||| || || ||||| ||| | |||||||||||||||||||| |||||| Sbjct: 148604 ttccgttctgtcaaaatcctaggaacaccagtcctacggtcatcaattctttgccgcagc 148663 Query: 1658 atgctcaagtttgtaaacagccttctacattatctaacttttgaggt 1704 |||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 148664 atgctcaagtttgtaaacagccttttacattatctaacctttgaggt 148710 Score = 113 bits (57), Expect = 3e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 566 ttttgtcagcggatgatgagttcattgaatgcactggctgttctaatagagaaggctatg 625 ||||| ||| ||||||||||||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 146214 ttttggcagaggatgatgagttcattgaacgcacttgctgttctagtcgagaaagctatc 146273 Query: 626 tccaataatactagtggttcggcgacacttaatctacttcatagtcagg 674 |||||||| || |||||||| || ||||||||||||||||| ||||||| Sbjct: 146274 tccaataacaccagtggttctgctacacttaatctacttcaaagtcagg 146322 Score = 113 bits (57), Expect = 3e-21 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1247 cagtctcttgttgacattgcgttgcgaagtacagcagctgcttctgatccaagtcatgaa 1306 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 148013 cagtctcttgttgacatcgcgttgcgaagtacggcagctgcttcagatccaagtcatgaa 148072 Query: 1307 gatttgacttgttgtgt 1323 || |||||||| ||||| Sbjct: 148073 gacttgacttgctgtgt 148089 Score = 111 bits (56), Expect = 1e-20 Identities = 80/88 (90%) Strand = Plus / Plus Query: 672 aggcaaaggcgatgtctggcgatagtgctgttcggtcattactggagaagatgaccgatt 731 |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 146575 aggcaaaggcaatggctggcgatagtgctgttcgatcattactggagaagatgacagagt 146634 Query: 732 gtgcaagtgcagcatacctcaggatgtt 759 ||||||||||||| || || |||||||| Sbjct: 146635 gtgcaagtgcagcgtatcttaggatgtt 146662 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 490 ggattatcaggcaatggttgctcaactggagcatcaattccgttttggaaggctctctgt 549 ||||||||||||||||||||||||||||||||| || |||||| |||| || || || || Sbjct: 146054 ggattatcaggcaatggttgctcaactggagcaccagttccgtcttgggagactgtcagt 146113 Query: 550 tcaaggattatggttcttttgtcag 574 ||||||||| ||||||||||||||| Sbjct: 146114 tcaaggattgtggttcttttgtcag 146138 Score = 99.6 bits (50), Expect = 5e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 32 atggatcccgcgccggcgacccctcgctggaacctggagcgcccctacctcaccggacgg 91 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 144343 atggatcccgcgccggcgacccctcgctggaacctggagcggccgtacctcaccggccgc 144402 Query: 92 ttccaccagg 101 ||||| |||| Sbjct: 144403 ttccatcagg 144412 Score = 99.6 bits (50), Expect = 5e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 1474 atggccactatctcttgtaatttcaaggaaggctttaacaaagtaccaattgatctttcg 1533 ||||||||||||||| ||||||||||| || |||| ||||| ||||| ||||| ||||| Sbjct: 148394 atggccactatctctagtaatttcaagaaaatctttgacaaaataccagttgatttttcg 148453 Query: 1534 tctattgtttcactgcaaacatgttagtcgccaattgtgtcaagcgtggcagatccaaca 1593 || ||||| |||||||| ||||||||||| ||||||||| ||| ||||| || ||||| Sbjct: 148454 gctgttgttccactgcaagcatgttagtcgacaattgtgtacagcatggcaaattcaaca 148513 Query: 1594 ag 1595 || Sbjct: 148514 ag 148515 Score = 97.6 bits (49), Expect = 2e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 767 tgggtgtatgagggtgtcatagatgacccttatggtgaattcttcattgctgaaaacaaa 826 ||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146866 tgggtctatgagggcgttatagatgatccttatggtgaattcttcattgctgaaaacaaa 146925 Query: 827 tctctgcagaagg 839 || ||||||||| Sbjct: 146926 tccttgcagaagg 146938 Score = 89.7 bits (45), Expect = 5e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 1764 aggtcatccagatacacgatttcttcctccagaagtgtctaaaagaatgcttgctgttgt 1823 ||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 148923 aggtcatacagattcatgatttcttcctgcagaagtgtctaaaagaatgcttattgttgt 148982 Query: 1824 tgcctgagctcct 1836 ||||||| ||||| Sbjct: 148983 tgcctgaactcct 148995 Score = 87.7 bits (44), Expect = 2e-13 Identities = 110/132 (83%) Strand = Plus / Plus Query: 356 caggagttgactcgtcgaattttccccttatgtgaagatttcgtgctagcaagccagttt 415 ||||| || |||||||| ||||| ||||||||||| ||||| || | | | ||| ||| Sbjct: 145611 caggaattaactcgtcggatttttcccttatgtgaggattttgtcttggtataccatttt 145670 Query: 416 gtggagtccaggtcacatttcaaaaatggtttggtcaaccatgctctagcggcagctcta 475 ||||||||||| ||||||||||| | ||| ||||||||||||||||||| ||||| | Sbjct: 145671 gtggagtccagatcacatttcaagagtggcctggtcaaccatgctctagctgcagcattg 145730 Query: 476 agggcattcctc 487 |||||||||||| Sbjct: 145731 agggcattcctc 145742 Score = 81.8 bits (41), Expect = 1e-11 Identities = 53/57 (92%) Strand = Plus / Plus Query: 1110 agtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaag 1166 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct: 147509 agtatgatctcattgggaaactgcgatccctcaagcgatatctacttcttgaccaag 147565 Score = 79.8 bits (40), Expect = 4e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 1325 gaaagaagttccctgcttaaaaagctgacaaccttgaaagacctggactgtgcttactct 1384 |||||||||||||| ||||| || ||| ||| |||||||| |||| ||||| || || Sbjct: 148170 gaaagaagttccctccttaagaaattgagcaccctgaaagacttggattgtgcatatcct 148229 Query: 1385 tcagacaagcttgccgcagctgatgttgatcagcccgtgacattaaacataactggcttg 1444 ||||||||||||| |||||||||||||| || ||| || | |||| | ||||||||| Sbjct: 148230 tcagacaagcttgtggcagctgatgttgaccatcccatgccgttaagtgtgactggcttg 148289 Query: 1445 gaaacattctgccttggctacaag 1468 ||||| |||||||| |||||||| Sbjct: 148290 gaaactttctgcctgagctacaag 148313 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1701 aggttcttgaaccaaactggcattcaatgcatggccgccttcaaactgcaaggagcatcg 1760 |||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| | Sbjct: 148781 aggttcttgaaccaaattggcatttgatgcatgatcggcttcaaactgcaaggagcatag 148840 Query: 1761 atgaggt 1767 ||||||| Sbjct: 148841 atgaggt 148847 Score = 63.9 bits (32), Expect = 3e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 98 caggaggcgaaggtgtccgcggcgtcgcaggcgcccggatccaagcctttctctatcgac 157 |||||||| |||||| | |||||| |||||| | ||||||||||||||| ||| ||||| Sbjct: 144509 caggaggccaaggtggctgcggcggcgcagggggccggatccaagccttactccctcgac 144568 Query: 158 tccttcag 165 |||||||| Sbjct: 144569 tccttcag 144576 Score = 52.0 bits (26), Expect = 0.010 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1847 gagaagctgaaagcattatgcctccaatacgcgacctccatccagctcttgataccgtcc 1906 |||||||||||||| | || ||||| || ||||| ||||||||||| |||||||| ||| Sbjct: 149500 gagaagctgaaagctctgtgtctccagtatgcgacttccatccagctattgataccatcc 149559 Query: 1907 at 1908 || Sbjct: 149560 at 149561 Score = 50.1 bits (25), Expect = 0.039 Identities = 43/49 (87%) Strand = Plus / Plus Query: 176 ggcggcggcgctgggagtgtcctcgggtcgtacgctgtttctgtgcagg 224 ||||||||||||| ||||||| |||| |||||||| || || ||||||| Sbjct: 144683 ggcggcggcgctgagagtgtcatcggatcgtacgccgtctcagtgcagg 144731
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 208 bits (105), Expect = 7e-50 Identities = 132/141 (93%) Strand = Plus / Plus Query: 219 tgcaggagcttttagttattgatgatttgctatcagctctgctgggtattgagggaagat 278 ||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 25024801 tgcaggagcttttggtcattgatgatttgttatcagctcttgtgggtattgagggacgat 25024860 Query: 279 acatttccattaagagagtacgcggaaaggagggatatgttgtcttccagattgattctt 338 ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 25024861 acatttcgattaagagagtacggggaaaggaggggtatgttgtcttccagattgattctt 25024920 Query: 339 caatggaccttgcactccagg 359 ||||||||||||||||||||| Sbjct: 25024921 caatggaccttgcactccagg 25024941 Score = 155 bits (78), Expect = 9e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 1010 tctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatctgcttat 1069 |||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 25026739 tctaagctgatgggctttggttcaaaccaccaatatcttgaatgcatcaaatctgcgtat 25026798 Query: 1070 gattttgcaagtggtgagctcttgactctaatgaaagataag 1111 || |||||||||||||| |||||||||||||||||||||||| Sbjct: 25026799 gactttgcaagtggtgaactcttgactctaatgaaagataag 25026840 Score = 145 bits (73), Expect = 9e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 837 aggagagtctcactcaggattatgatgccaaatattggcagcaacggtacagcctaaaag 896 ||||||| || ||||| ||||||||||| ||||||||||||||| | ||||| ||||||| Sbjct: 25026474 aggagagccttactcaagattatgatgctaaatattggcagcaaagatacagtctaaaag 25026533 Query: 897 atggcatccctagttttctcaataatgttgccgccaccattctaacaacaggaaagtatc 956 |||||||||||||||| || | |||||||||||||| || || ||||| ||||| |||| Sbjct: 25026534 atggcatccctagtttccttaccaatgttgccgccacaatactgacaactggaaaatatc 25026593 Query: 957 ttaatgtcatgagagaatgtg 977 ||||||| ||||||||||||| Sbjct: 25026594 ttaatgttatgagagaatgtg 25026614 Score = 135 bits (68), Expect = 9e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaa 1225 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 25027188 ggtgattttctggttcactttatggatattgcccgagaggagcttacaaagaaaccagaa 25027247 Query: 1226 gatatatccgttgaaaaacttcag 1249 || ||||| ||||||||||||||| Sbjct: 25027248 gaaatatctgttgaaaaacttcag 25027271 Score = 133 bits (67), Expect = 3e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 1598 ttccggtctgtcaagattcttggaacgccaattctacggtcatcaattctttgtcgcagc 1657 ||||| |||||||| || || ||||| ||| | |||||||||||||||||||| |||||| Sbjct: 25028019 ttccgttctgtcaaaatcctaggaacaccagtcctacggtcatcaattctttgccgcagc 25028078 Query: 1658 atgctcaagtttgtaaacagccttctacattatctaacttttgaggt 1704 |||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 25028079 atgctcaagtttgtaaacagccttttacattatctaacctttgaggt 25028125 Score = 113 bits (57), Expect = 3e-21 Identities = 96/109 (88%) Strand = Plus / Plus Query: 566 ttttgtcagcggatgatgagttcattgaatgcactggctgttctaatagagaaggctatg 625 ||||| ||| ||||||||||||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 25025629 ttttggcagaggatgatgagttcattgaacgcacttgctgttctagtcgagaaagctatc 25025688 Query: 626 tccaataatactagtggttcggcgacacttaatctacttcatagtcagg 674 |||||||| || |||||||| || ||||||||||||||||| ||||||| Sbjct: 25025689 tccaataacaccagtggttctgctacacttaatctacttcaaagtcagg 25025737 Score = 113 bits (57), Expect = 3e-21 Identities = 72/77 (93%) Strand = Plus / Plus Query: 1247 cagtctcttgttgacattgcgttgcgaagtacagcagctgcttctgatccaagtcatgaa 1306 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 25027428 cagtctcttgttgacatcgcgttgcgaagtacggcagctgcttcagatccaagtcatgaa 25027487 Query: 1307 gatttgacttgttgtgt 1323 || |||||||| ||||| Sbjct: 25027488 gacttgacttgctgtgt 25027504 Score = 111 bits (56), Expect = 1e-20 Identities = 80/88 (90%) Strand = Plus / Plus Query: 672 aggcaaaggcgatgtctggcgatagtgctgttcggtcattactggagaagatgaccgatt 731 |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 25025990 aggcaaaggcaatggctggcgatagtgctgttcgatcattactggagaagatgacagagt 25026049 Query: 732 gtgcaagtgcagcatacctcaggatgtt 759 ||||||||||||| || || |||||||| Sbjct: 25026050 gtgcaagtgcagcgtatcttaggatgtt 25026077 Score = 105 bits (53), Expect = 8e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 490 ggattatcaggcaatggttgctcaactggagcatcaattccgttttggaaggctctctgt 549 ||||||||||||||||||||||||||||||||| || |||||| |||| || || || || Sbjct: 25025469 ggattatcaggcaatggttgctcaactggagcaccagttccgtcttgggagactgtcagt 25025528 Query: 550 tcaaggattatggttcttttgtcag 574 ||||||||| ||||||||||||||| Sbjct: 25025529 tcaaggattgtggttcttttgtcag 25025553 Score = 99.6 bits (50), Expect = 5e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 32 atggatcccgcgccggcgacccctcgctggaacctggagcgcccctacctcaccggacgg 91 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 25023758 atggatcccgcgccggcgacccctcgctggaacctggagcggccgtacctcaccggccgc 25023817 Query: 92 ttccaccagg 101 ||||| |||| Sbjct: 25023818 ttccatcagg 25023827 Score = 99.6 bits (50), Expect = 5e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 1474 atggccactatctcttgtaatttcaaggaaggctttaacaaagtaccaattgatctttcg 1533 ||||||||||||||| ||||||||||| || |||| ||||| ||||| ||||| ||||| Sbjct: 25027809 atggccactatctctagtaatttcaagaaaatctttgacaaaataccagttgatttttcg 25027868 Query: 1534 tctattgtttcactgcaaacatgttagtcgccaattgtgtcaagcgtggcagatccaaca 1593 || ||||| |||||||| ||||||||||| ||||||||| ||| ||||| || ||||| Sbjct: 25027869 gctgttgttccactgcaagcatgttagtcgacaattgtgtacagcatggcaaattcaaca 25027928 Query: 1594 ag 1595 || Sbjct: 25027929 ag 25027930 Score = 97.6 bits (49), Expect = 2e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 767 tgggtgtatgagggtgtcatagatgacccttatggtgaattcttcattgctgaaaacaaa 826 ||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 25026281 tgggtctatgagggcgttatagatgatccttatggtgaattcttcattgctgaaaacaaa 25026340 Query: 827 tctctgcagaagg 839 || ||||||||| Sbjct: 25026341 tccttgcagaagg 25026353 Score = 89.7 bits (45), Expect = 5e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 1764 aggtcatccagatacacgatttcttcctccagaagtgtctaaaagaatgcttgctgttgt 1823 ||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 25028338 aggtcatacagattcatgatttcttcctgcagaagtgtctaaaagaatgcttattgttgt 25028397 Query: 1824 tgcctgagctcct 1836 ||||||| ||||| Sbjct: 25028398 tgcctgaactcct 25028410 Score = 87.7 bits (44), Expect = 2e-13 Identities = 110/132 (83%) Strand = Plus / Plus Query: 356 caggagttgactcgtcgaattttccccttatgtgaagatttcgtgctagcaagccagttt 415 ||||| || |||||||| ||||| ||||||||||| ||||| || | | | ||| ||| Sbjct: 25025026 caggaattaactcgtcggatttttcccttatgtgaggattttgtcttggtataccatttt 25025085 Query: 416 gtggagtccaggtcacatttcaaaaatggtttggtcaaccatgctctagcggcagctcta 475 ||||||||||| ||||||||||| | ||| ||||||||||||||||||| ||||| | Sbjct: 25025086 gtggagtccagatcacatttcaagagtggcctggtcaaccatgctctagctgcagcattg 25025145 Query: 476 agggcattcctc 487 |||||||||||| Sbjct: 25025146 agggcattcctc 25025157 Score = 81.8 bits (41), Expect = 1e-11 Identities = 53/57 (92%) Strand = Plus / Plus Query: 1110 agtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaag 1166 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct: 25026924 agtatgatctcattgggaaactgcgatccctcaagcgatatctacttcttgaccaag 25026980 Score = 79.8 bits (40), Expect = 4e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 1325 gaaagaagttccctgcttaaaaagctgacaaccttgaaagacctggactgtgcttactct 1384 |||||||||||||| ||||| || ||| ||| |||||||| |||| ||||| || || Sbjct: 25027585 gaaagaagttccctccttaagaaattgagcaccctgaaagacttggattgtgcatatcct 25027644 Query: 1385 tcagacaagcttgccgcagctgatgttgatcagcccgtgacattaaacataactggcttg 1444 ||||||||||||| |||||||||||||| || ||| || | |||| | ||||||||| Sbjct: 25027645 tcagacaagcttgtggcagctgatgttgaccatcccatgccgttaagtgtgactggcttg 25027704 Query: 1445 gaaacattctgccttggctacaag 1468 ||||| |||||||| |||||||| Sbjct: 25027705 gaaactttctgcctgagctacaag 25027728 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1701 aggttcttgaaccaaactggcattcaatgcatggccgccttcaaactgcaaggagcatcg 1760 |||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| | Sbjct: 25028196 aggttcttgaaccaaattggcatttgatgcatgatcggcttcaaactgcaaggagcatag 25028255 Query: 1761 atgaggt 1767 ||||||| Sbjct: 25028256 atgaggt 25028262 Score = 63.9 bits (32), Expect = 3e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 98 caggaggcgaaggtgtccgcggcgtcgcaggcgcccggatccaagcctttctctatcgac 157 |||||||| |||||| | |||||| |||||| | ||||||||||||||| ||| ||||| Sbjct: 25023924 caggaggccaaggtggctgcggcggcgcagggggccggatccaagccttactccctcgac 25023983 Query: 158 tccttcag 165 |||||||| Sbjct: 25023984 tccttcag 25023991 Score = 52.0 bits (26), Expect = 0.010 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1847 gagaagctgaaagcattatgcctccaatacgcgacctccatccagctcttgataccgtcc 1906 |||||||||||||| | || ||||| || ||||| ||||||||||| |||||||| ||| Sbjct: 25028915 gagaagctgaaagctctgtgtctccagtatgcgacttccatccagctattgataccatcc 25028974 Query: 1907 at 1908 || Sbjct: 25028975 at 25028976 Score = 50.1 bits (25), Expect = 0.039 Identities = 43/49 (87%) Strand = Plus / Plus Query: 176 ggcggcggcgctgggagtgtcctcgggtcgtacgctgtttctgtgcagg 224 ||||||||||||| ||||||| |||| |||||||| || || ||||||| Sbjct: 25024098 ggcggcggcgctgagagtgtcatcggatcgtacgccgtctcagtgcagg 25024146
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 178 bits (90), Expect = 6e-41 Identities = 130/142 (91%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 219 tgcaggagcttttagttattgatgatttgctatcagctctgctgggtattgagggaagat 278 ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| | | Sbjct: 16981763 tgcaggagcttttggttattgatgatttgttatcagctcttgtgggtattgagggacgtt 16981704 Query: 279 acatttccattaagagag-tacgcggaaaggagggatatgttgtcttccagattgattct 337 ||||||| | |||||||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 16981703 acatttcgaataagagaggtacggggaaaggacgggtatgttgtcttccagattgattct 16981644 Query: 338 tcaatggaccttgcactccagg 359 |||||||||||||||||||||| Sbjct: 16981643 tcaatggaccttgcactccagg 16981622 Score = 54.0 bits (27), Expect = 0.003 Identities = 63/75 (84%) Strand = Plus / Minus Query: 413 tttgtggagtccaggtcacatttcaaaaatggtttggtcaaccatgctctagcggcagct 472 |||||||||||||| || |||||||| | ||| ||||||| || |||||||| ||||| Sbjct: 16981515 tttgtggagtccagatcgcatttcaagagtggcctggtcaatcaagctctagctgcagca 16981456 Query: 473 ctaagggcattcctc 487 | |||||||||||| Sbjct: 16981455 ttgagggcattcctc 16981441
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 178 bits (90), Expect = 6e-41 Identities = 130/142 (91%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 219 tgcaggagcttttagttattgatgatttgctatcagctctgctgggtattgagggaagat 278 ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| | | Sbjct: 33019 tgcaggagcttttggttattgatgatttgttatcagctcttgtgggtattgagggacgtt 32960 Query: 279 acatttccattaagagag-tacgcggaaaggagggatatgttgtcttccagattgattct 337 ||||||| | |||||||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 32959 acatttcgaataagagaggtacggggaaaggacgggtatgttgtcttccagattgattct 32900 Query: 338 tcaatggaccttgcactccagg 359 |||||||||||||||||||||| Sbjct: 32899 tcaatggaccttgcactccagg 32878 Score = 54.0 bits (27), Expect = 0.003 Identities = 63/75 (84%) Strand = Plus / Minus Query: 413 tttgtggagtccaggtcacatttcaaaaatggtttggtcaaccatgctctagcggcagct 472 |||||||||||||| || |||||||| | ||| ||||||| || |||||||| ||||| Sbjct: 32771 tttgtggagtccagatcgcatttcaagagtggcctggtcaatcaagctctagctgcagca 32712 Query: 473 ctaagggcattcctc 487 | |||||||||||| Sbjct: 32711 ttgagggcattcctc 32697
>gb|BT014310.1| Lycopersicon esculentum clone 133561F, mRNA sequence Length = 1527 Score = 133 bits (67), Expect = 3e-27 Identities = 121/139 (87%) Strand = Plus / Plus Query: 761 gagagatgggtgtatgagggtgtcatagatgacccttatggtgaattcttcattgctgaa 820 ||||| ||||||||||| || || || ||||| ||||||||||||||||| ||||| || Sbjct: 755 gagaggtgggtgtatgaaggagtgattgatgatccttatggtgaattctttattgccgag 814 Query: 821 aacaaatctctgcagaaggagagtctcactcaggattatgatgccaaatattggcagcaa 880 ||||| ||||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 815 aacaagtctcttcagaaggagagtcttactcaagattatgatgccaagtactggcaacaa 874 Query: 881 cggtacagcctaaaagatg 899 || |||||||| ||||||| Sbjct: 875 cgttacagcctgaaagatg 893 Score = 60.0 bits (30), Expect = 4e-05 Identities = 186/238 (78%) Strand = Plus / Plus Query: 1049 gagtgcatcaaatctgcttatgattttgcaagtggtgagctcttgactctaatgaaagat 1108 ||||| ||||| ||||||||||||||||| ||||| || || || | || | ||| | Sbjct: 1043 gagtgtatcaagtctgcttatgattttgccagtggcgaactattaaaccttgttaaaaac 1102 Query: 1109 aagtatgatctcattgggaaactgcgatcattgaagcgctatctacttcttgaccaaggt 1168 |||||||||||||| || ||||||| ||| | |||| |||||| |||||||| || ||| Sbjct: 1103 aagtatgatctcatgggtaaactgcaatctattaagcactatcttcttcttgatcagggt 1162 Query: 1169 gattttttggttcattttatggatattgcccgagaggagcttacaaagaaaccagaagat 1228 ||||| || || || || ||||||| || |||||||||| | ||||| || || || Sbjct: 1163 gatttcttagtgcacttcatggatacagctagagaggagctcatgaagaagcctgatgag 1222 Query: 1229 atatccgttgaaaaacttcagtctcttgttgacattgcgttgcgaagtacagcagctg 1286 ||||| || || || || ||||||||| | ||| |||| |||||| ||| ||||||| Sbjct: 1223 atatctgtggagaagctacagtctcttctagaccttgctttgcgatctactgcagctg 1280
>ref|NM_121747.2| Arabidopsis thaliana unknown protein (AT5G17410) mRNA, complete cds Length = 3027 Score = 99.6 bits (50), Expect = 5e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggtttccctgtca 1003 ||||| || ||||| || || |||||||||||||||||||||||||||||| || | ||| Sbjct: 951 acagggaaatatctaaacgttatgagagaatgtgggcacaatgttcaggttcccatatca 1010 Query: 1004 gaaaactctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatct 1063 || | |||||| | || | ||||| ||||| || || |||||||| ||||| || || Sbjct: 1011 gagagatctaagttaacaatatttgggtcaaatcatcattatcttgaatgcataaaggct 1070 Query: 1064 gcttatgattttgcaagtggtgagctcttgactctaatgaaagataagtatgatctcatt 1123 ||| | || ||||| ||| ||||| ||| ||| || || ||||||||||| || || Sbjct: 1071 gctcacgaatttgccagtatagagcttgtgaatctcatcaaggataagtatgaccttgtt 1130 Query: 1124 gggaaactgcgatcattgaagcgctatctacttcttgaccaaggtgattttttggttcat 1183 || | || ||||| | |||| |||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1131 ggaaggcttcgatctataaagcactatcttcttctcgaccagggtgatttcttggttcat 1190 Query: 1184 tttatggatattgcccgagaggagct 1209 |||||||| ||||| ||||||||||| Sbjct: 1191 tttatggacattgctcgagaggagct 1216 Score = 58.0 bits (29), Expect = 2e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 476 agggcattcctcctggattatcaggcaatggttgctcaactggagcatcaattccgtttt 535 |||||| ||||||| |||||||| || ||||| || ||| |||| |||||||| || || Sbjct: 483 agggcactcctccttgattatcaagccatggtggcacaattggaacatcaatttcgactt 542 Query: 536 ggaaggctctctgttcaaggattatggtt 564 ||||| || ||| | |||||||||||||| Sbjct: 543 ggaagactttctatccaaggattatggtt 571 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1676 agccttctacattatctaacttttgaggttcttgaaccaaactggcat 1723 ||||||||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1650 agccttctacattatcttacattcgaggttctcgaaccaaattggcat 1697 Score = 42.1 bits (21), Expect = 9.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1461 gctacaagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtacc 1520 |||||||| ||| ||||||||||||| |||| || |||| ||| || || ||||||||| Sbjct: 1435 gctacaaggttcaatggccactatctattgtcatatcaaagaaagcattgtcaaagtacc 1494 Query: 1521 a 1521 | Sbjct: 1495 a 1495
>ref|NM_180507.1| Arabidopsis thaliana unknown protein (AT5G17410) mRNA, complete cds Length = 3030 Score = 99.6 bits (50), Expect = 5e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggtttccctgtca 1003 ||||| || ||||| || || |||||||||||||||||||||||||||||| || | ||| Sbjct: 954 acagggaaatatctaaacgttatgagagaatgtgggcacaatgttcaggttcccatatca 1013 Query: 1004 gaaaactctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatct 1063 || | |||||| | || | ||||| ||||| || || |||||||| ||||| || || Sbjct: 1014 gagagatctaagttaacaatatttgggtcaaatcatcattatcttgaatgcataaaggct 1073 Query: 1064 gcttatgattttgcaagtggtgagctcttgactctaatgaaagataagtatgatctcatt 1123 ||| | || ||||| ||| ||||| ||| ||| || || ||||||||||| || || Sbjct: 1074 gctcacgaatttgccagtatagagcttgtgaatctcatcaaggataagtatgaccttgtt 1133 Query: 1124 gggaaactgcgatcattgaagcgctatctacttcttgaccaaggtgattttttggttcat 1183 || | || ||||| | |||| |||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1134 ggaaggcttcgatctataaagcactatcttcttctcgaccagggtgatttcttggttcat 1193 Query: 1184 tttatggatattgcccgagaggagct 1209 |||||||| ||||| ||||||||||| Sbjct: 1194 tttatggacattgctcgagaggagct 1219 Score = 58.0 bits (29), Expect = 2e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 476 agggcattcctcctggattatcaggcaatggttgctcaactggagcatcaattccgtttt 535 |||||| ||||||| |||||||| || ||||| || ||| |||| |||||||| || || Sbjct: 486 agggcactcctccttgattatcaagccatggtggcacaattggaacatcaatttcgactt 545 Query: 536 ggaaggctctctgttcaaggattatggtt 564 ||||| || ||| | |||||||||||||| Sbjct: 546 ggaagactttctatccaaggattatggtt 574 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1676 agccttctacattatctaacttttgaggttcttgaaccaaactggcat 1723 ||||||||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1653 agccttctacattatcttacattcgaggttctcgaaccaaattggcat 1700 Score = 42.1 bits (21), Expect = 9.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1461 gctacaagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtacc 1520 |||||||| ||| ||||||||||||| |||| || |||| ||| || || ||||||||| Sbjct: 1438 gctacaaggttcaatggccactatctattgtcatatcaaagaaagcattgtcaaagtacc 1497 Query: 1521 a 1521 | Sbjct: 1498 a 1498
>gb|AY040037.1| Arabidopsis thaliana putative spindle pole body protein (At5g17410) mRNA, complete cds Length = 2037 Score = 99.6 bits (50), Expect = 5e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggtttccctgtca 1003 ||||| || ||||| || || |||||||||||||||||||||||||||||| || | ||| Sbjct: 910 acagggaaatatctaaacgttatgagagaatgtgggcacaatgttcaggttcccatatca 969 Query: 1004 gaaaactctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatct 1063 || | |||||| | || | ||||| ||||| || || |||||||| ||||| || || Sbjct: 970 gagagatctaagttaacaatatttgggtcaaatcatcattatcttgaatgcataaaggct 1029 Query: 1064 gcttatgattttgcaagtggtgagctcttgactctaatgaaagataagtatgatctcatt 1123 ||| | || ||||| ||| ||||| ||| ||| || || ||||||||||| || || Sbjct: 1030 gctcacgaatttgccagtatagagcttgtgaatctcatcaaggataagtatgaccttgtt 1089 Query: 1124 gggaaactgcgatcattgaagcgctatctacttcttgaccaaggtgattttttggttcat 1183 || | || ||||| | |||| |||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1090 ggaaggcttcgatctataaagcactatcttcttctcgaccagggtgatttcttggttcat 1149 Query: 1184 tttatggatattgcccgagaggagct 1209 |||||||| ||||| ||||||||||| Sbjct: 1150 tttatggacattgctcgagaggagct 1175 Score = 58.0 bits (29), Expect = 2e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 476 agggcattcctcctggattatcaggcaatggttgctcaactggagcatcaattccgtttt 535 |||||| ||||||| |||||||| || ||||| || ||| |||| |||||||| || || Sbjct: 442 agggcactcctccttgattatcaagccatggtggcacaattggaacatcaatttcgactt 501 Query: 536 ggaaggctctctgttcaaggattatggtt 564 ||||| || ||| | |||||||||||||| Sbjct: 502 ggaagactttctatccaaggattatggtt 530 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1676 agccttctacattatctaacttttgaggttcttgaaccaaactggcat 1723 ||||||||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1609 agccttctacattatcttacattcgaggttctcgaaccaaattggcat 1656 Score = 42.1 bits (21), Expect = 9.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1461 gctacaagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtacc 1520 |||||||| ||| ||||||||||||| |||| || |||| ||| || || ||||||||| Sbjct: 1394 gctacaaggttcaatggccactatctattgtcatatcaaagaaagcattgtcaaagtacc 1453 Query: 1521 a 1521 | Sbjct: 1454 a 1454
>gb|AF360238.1| Arabidopsis thaliana putative spindle pole body protein (At5g17410) mRNA, complete cds Length = 2308 Score = 99.6 bits (50), Expect = 5e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggtttccctgtca 1003 ||||| || ||||| || || |||||||||||||||||||||||||||||| || | ||| Sbjct: 951 acagggaaatatctaaacgttatgagagaatgtgggcacaatgttcaggttcccatatca 1010 Query: 1004 gaaaactctaagctgacgagctttggttcaaaccaccaatatcttgagtgcatcaaatct 1063 || | |||||| | || | ||||| ||||| || || |||||||| ||||| || || Sbjct: 1011 gagagatctaagttaacaatatttgggtcaaatcatcattatcttgaatgcataaaggct 1070 Query: 1064 gcttatgattttgcaagtggtgagctcttgactctaatgaaagataagtatgatctcatt 1123 ||| | || ||||| ||| ||||| ||| ||| || || ||||||||||| || || Sbjct: 1071 gctcacgaatttgccagtatagagcttgtgaatctcatcaaggataagtatgaccttgtt 1130 Query: 1124 gggaaactgcgatcattgaagcgctatctacttcttgaccaaggtgattttttggttcat 1183 || | || ||||| | |||| |||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1131 ggaaggcttcgatctataaagcactatcttcttctcgaccagggtgatttcttggttcat 1190 Query: 1184 tttatggatattgcccgagaggagct 1209 |||||||| ||||| ||||||||||| Sbjct: 1191 tttatggacattgctcgagaggagct 1216 Score = 58.0 bits (29), Expect = 2e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 476 agggcattcctcctggattatcaggcaatggttgctcaactggagcatcaattccgtttt 535 |||||| ||||||| |||||||| || ||||| || ||| |||| |||||||| || || Sbjct: 483 agggcactcctccttgattatcaagccatggtggcacaattggaacatcaatttcgactt 542 Query: 536 ggaaggctctctgttcaaggattatggtt 564 ||||| || ||| | |||||||||||||| Sbjct: 543 ggaagactttctatccaaggattatggtt 571 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1676 agccttctacattatctaacttttgaggttcttgaaccaaactggcat 1723 ||||||||||||||||| || || |||||||| |||||||| |||||| Sbjct: 1650 agccttctacattatcttacattcgaggttctcgaaccaaattggcat 1697 Score = 42.1 bits (21), Expect = 9.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1461 gctacaagattccatggccactatctcttgtaatttcaaggaaggctttaacaaagtacc 1520 |||||||| ||| ||||||||||||| |||| || |||| ||| || || ||||||||| Sbjct: 1435 gctacaaggttcaatggccactatctattgtcatatcaaagaaagcattgtcaaagtacc 1494 Query: 1521 a 1521 | Sbjct: 1495 a 1495
>gb|AY107266.1| Zea mays PCO092407 mRNA sequence Length = 655 Score = 97.6 bits (49), Expect = 2e-16 Identities = 145/177 (81%) Strand = Plus / Plus Query: 1969 atcacaggacagagacgagcaactgaagctagcatcggagaacgccgtgatgtcacagtc 2028 |||||||||||||||| |||| ||||| |||||||| ||||| | || |||||| |||| Sbjct: 135 atcacaggacagagaccagcagctgaaactagcatcagagaatgttgtcatgtcagagtc 194 Query: 2029 aatcctgaagttcgagtcggagttcaatgcggagctccagagcctagttcctacgctgag 2088 |||||||| || || | | ||||||| | ||||| ||||| || | |||||||||||| Sbjct: 195 gatcctgaaatttgaagcagcgttcaattcagagctgcagagtcttgctcctacgctgag 254 Query: 2089 caagagctcgcaggccgagccgtacctgacccatctcgcgcagtgcattctcggcgt 2145 || || || || || ||||||||| |||| |||||||| ||||||||||| ||||| Sbjct: 255 taacagttcacaagcggagccgtacgtgactcatctcgcacagtgcattcttggcgt 311 Score = 48.1 bits (24), Expect = 0.16 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1847 gagaagctgaaagcattatgcctccaatacgcgacctccatccagctcttgataccgtcc 1906 ||||||||||||| |||||||| || || || || ||||||||| ||||||| || || Sbjct: 13 gagaagctgaaaggtttatgccttcagtatgccacttccatccagatcttgatgccatct 72 Query: 1907 atcgaggtcgct 1918 ||||| |||||| Sbjct: 73 atcgatgtcgct 84
>gb|AC152964.17| Medicago truncatula chromosome 8 clone mth2-82o6 map 3.000cM, complete sequence Length = 105861 Score = 71.9 bits (36), Expect = 1e-08 Identities = 60/68 (88%) Strand = Plus / Minus Query: 764 agatgggtgtatgagggtgtcatagatgacccttatggtgaattcttcattgctgaaaac 823 |||||||| ||||| || || |||||||| |||||||||||||| |||||||| ||| || Sbjct: 29635 agatgggtctatgaaggagtaatagatgatccttatggtgaatttttcattgcagaagac 29576 Query: 824 aaatctct 831 |||||||| Sbjct: 29575 aaatctct 29568 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggt 993 |||||||| ||||| |||||| ||||||||||||| |||||||||||||| Sbjct: 29354 acaggaaaatatctaaatgtcctgagagaatgtggacacaatgttcaggt 29305 Score = 52.0 bits (26), Expect = 0.010 Identities = 56/66 (84%) Strand = Plus / Minus Query: 1021 gagctttggttcaaaccaccaatatcttgagtgcatcaaatctgcttatgattttgcaag 1080 ||||||||| ||||| || || |||||||| || ||||| |||||||| | |||||||| Sbjct: 29160 gagctttggctcaaatcatcattatcttgaatgtatcaaggctgcttataactttgcaag 29101 Query: 1081 tggtga 1086 |||||| Sbjct: 29100 tggtga 29095 Score = 48.1 bits (24), Expect = 0.16 Identities = 54/64 (84%) Strand = Plus / Minus Query: 837 aggagagtctcactcaggattatgatgccaaatattggcagcaacggtacagcctaaaag 896 |||||||||||||| | ||||||||||| || || |||| ||||| || ||||| |||| Sbjct: 29461 aggagagtctcactaaagattatgatgctaagtactggcgacaacgttatagcctcaaag 29402 Query: 897 atgg 900 |||| Sbjct: 29401 atgg 29398
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project) Length = 33563 Score = 63.9 bits (32), Expect = 3e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1166 ggtgattttttggttcattttatggatattgcccgagaggagct 1209 |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 17943 ggtgatttcttggttcattttatggacattgctcgagaggagct 17986 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 944 acaggaaagtatcttaatgtcatgagagaatgtgggcacaatgttcaggt 993 ||||| || ||||| || || ||||||||||||||||||||||||||||| Sbjct: 17403 acagggaaatatctaaacgttatgagagaatgtgggcacaatgttcaggt 17452 Score = 46.1 bits (23), Expect = 0.61 Identities = 62/75 (82%) Strand = Plus / Plus Query: 490 ggattatcaggcaatggttgctcaactggagcatcaattccgttttggaaggctctctgt 549 ||||||||| || ||||| || ||| |||| |||||||| || ||||||| || ||| | Sbjct: 16417 ggattatcaagccatggtggcacaattggaacatcaatttcgacttggaagactttctat 16476 Query: 550 tcaaggattatggtt 564 |||||||||||||| Sbjct: 16477 ccaaggattatggtt 16491
>emb|Z46843.1|SCCHXIV43 S.cerevisiae chromosome XIV DNA (43.5 kb) Length = 43481 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 795 cttatggtgaattcttcattgctgaaaaca 824 ||||||| |||||||||||||||||||||| Sbjct: 38740 cttatggagaattcttcattgctgaaaaca 38769
>emb|Z69382.1|SCCXIV38K S.cerevisiae 37,800 bp segment of chromosome XIV Length = 37800 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 795 cttatggtgaattcttcattgctgaaaaca 824 ||||||| |||||||||||||||||||||| Sbjct: 4240 cttatggagaattcttcattgctgaaaaca 4269
>gb|DQ332463.1| Synthetic construct Saccharomyces cerevisiae clone FLH202985.01X SPC98 gene, complete sequence Length = 2541 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 795 cttatggtgaattcttcattgctgaaaaca 824 ||||||| |||||||||||||||||||||| Sbjct: 1073 cttatggagaattcttcattgctgaaaaca 1102
>emb|Z71402.1|SCYNL126W S.cerevisiae chromosome XIV reading frame ORF YNL126w Length = 6086 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 795 cttatggtgaattcttcattgctgaaaaca 824 ||||||| |||||||||||||||||||||| Sbjct: 4240 cttatggagaattcttcattgctgaaaaca 4269
>gb|AY023181.1| Oryza sativa microsatellite MRG5506 containing (GCG)X8, closest to marker R2226, genomic sequence Length = 224 Score = 50.1 bits (25), Expect = 0.039 Identities = 43/49 (87%) Strand = Plus / Plus Query: 176 ggcggcggcgctgggagtgtcctcgggtcgtacgctgtttctgtgcagg 224 ||||||||||||| ||||||| |||| |||||||| || || ||||||| Sbjct: 115 ggcggcggcgctgagagtgtcatcggatcgtacgccgtctcagtgcagg 163
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1153 acttcttgaccaaggtgatttttt 1176 |||||||||||||||||||||||| Sbjct: 2313972 acttcttgaccaaggtgatttttt 2313949
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 gcggagctggcggcggcgctgg 189 |||||||||||||||||||||| Sbjct: 4035254 gcggagctggcggcggcgctgg 4035233 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1756 catcgatgaggtcatccagat 1776 ||||||||||||||||||||| Sbjct: 1818165 catcgatgaggtcatccagat 1818145
>gb|AC188958.1| Trichinella spiralis chromosome UNK clone TS195-34H12, complete sequence Length = 86569 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1705 tcttgaaccaaactggcattcaatgc 1730 ||||||||||||||||| |||||||| Sbjct: 63100 tcttgaaccaaactggcgttcaatgc 63075
>gb|AC153076.3| Aotus nancymaae clone CH258-449A9, complete sequence Length = 184072 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 542 ctctctgttcaaggattatggttctt 567 |||||||||||||||||||| ||||| Sbjct: 89966 ctctctgttcaaggattatgtttctt 89991
>dbj|AB105059.1| Tachypleus tridentatus tToll mRNA for toll-like receptor, complete cds Length = 3849 Score = 44.1 bits (22), Expect = 2.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 922 tgttgccgccaccattctaacaacaggaaa 951 ||||||||||||||| |||||| ||||||| Sbjct: 1726 tgttgccgccaccatgctaacatcaggaaa 1697
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 tgtccgcggcgtcgcaggcgc 131 ||||||||||||||||||||| Sbjct: 803673 tgtccgcggcgtcgcaggcgc 803653
>emb|AM263198.1| Listeria welshimeri serovar 6b str. SLCC5334 complete genome Length = 2814130 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1773 agatacacgatttcttcctcc 1793 ||||||||||||||||||||| Sbjct: 2151708 agatacacgatttcttcctcc 2151728
>ref|XM_001156449.1| PREDICTED: Pan troglodytes hook homolog 1, transcript variant 2 (HOOK1), mRNA Length = 5991 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 36 ggaggtgaaggtgtccgcggcgtcg 60
>ref|XM_001156562.1| PREDICTED: Pan troglodytes hook homolog 1, transcript variant 3 (HOOK1), mRNA Length = 6022 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 214 ggaggtgaaggtgtccgcggcgtcg 238
>ref|XM_513444.2| PREDICTED: Pan troglodytes hook homolog 1, transcript variant 4 (HOOK1), mRNA Length = 5878 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 70 ggaggtgaaggtgtccgcggcgtcg 94
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1175 ttggttcattttatggatatt 1195 ||||||||||||||||||||| Sbjct: 19321973 ttggttcattttatggatatt 19321953
>ref|XM_001082586.1| PREDICTED: Macaca mulatta hook homolog 1 (HOOK1), mRNA Length = 5984 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 214 ggaggtgaaggtgtccgcggcgtcg 238
>emb|CT573150.6| Mouse DNA sequence from clone RP24-221A14 on chromosome 9, complete sequence Length = 183696 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 14033 ggccacagctcctctccctgcccac 14009
>ref|NM_015888.4| Homo sapiens hook homolog 1 (Drosophila) (HOOK1), mRNA Length = 5865 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 214 ggaggtgaaggtgtccgcggcgtcg 238
>gb|BC107857.1| Homo sapiens cDNA clone IMAGE:5501368, partial cds Length = 1072 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 128 ggaggtgaaggtgtccgcggcgtcg 152
>gb|U58755.3| Caenorhabditis elegans cosmid C34D4, complete sequence Length = 45313 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2080 tacgctgagcaagagctcgca 2100 ||||||||||||||||||||| Sbjct: 20941 tacgctgagcaagagctcgca 20961
>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence Length = 183048 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1175 ttggttcattttatggatatt 1195 ||||||||||||||||||||| Sbjct: 169656 ttggttcattttatggatatt 169636
>gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome 12, complete sequence Length = 179330 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1541 tttcactgcaaacatgttagt 1561 ||||||||||||||||||||| Sbjct: 101535 tttcactgcaaacatgttagt 101555
>gb|AC129599.3| Mus musculus BAC clone RP23-349A5 from chromosome 8, complete sequence Length = 188426 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1778 cacgatttcttcctccagaag 1798 ||||||||||||||||||||| Sbjct: 130099 cacgatttcttcctccagaag 130079
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1657 catgctcaagtttgtaaacag 1677 ||||||||||||||||||||| Sbjct: 117043 catgctcaagtttgtaaacag 117023
>gb|BC027824.1| Mus musculus angiomotin like 2, mRNA (cDNA clone MGC:36419 IMAGE:5323888), complete cds Length = 4185 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2240 ggccacagctcctctccctgcccac 2264
>ref|NM_001031487.1| Gallus gallus alpha-1,3-fucosyltransferase (CFT1), mRNA Length = 1071 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ccgcggagctggcggcggcgctggg 190 |||||||| |||||||||||||||| Sbjct: 46 ccgcggaggtggcggcggcgctggg 70
>dbj|AK141348.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430036K03 product:angiomotin like 2, full insert sequence Length = 4162 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2270 ggccacagctcctctccctgcccac 2294
>dbj|AK164279.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030064A16 product:angiomotin like 2, full insert sequence Length = 4081 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2339 ggccacagctcctctccctgcccac 2363
>dbj|AK169419.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920195M12 product:angiomotin like 2, full insert sequence Length = 4190 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2270 ggccacagctcctctccctgcccac 2294
>dbj|AK164819.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830045F22 product:angiomotin like 2, full insert sequence Length = 4292 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2370 ggccacagctcctctccctgcccac 2394
>dbj|AB179475.1| Macaca fascicularis testis cDNA clone: QtsA-20935, similar to human hook homolog 1 (Drosophila) (HOOK1), mRNA, RefSeq: NM_015888.3 Length = 2219 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 52 ggaggtgaaggtgtccgcggcgtcg 76
>ref|NM_068719.2| Caenorhabditis elegans C34D4.14 (C34D4.14) mRNA, complete cds Length = 8796 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2080 tacgctgagcaagagctcgca 2100 ||||||||||||||||||||| Sbjct: 7570 tacgctgagcaagagctcgca 7550
>dbj|AK077535.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730439I15 product:Leman coiled-coil protein, full insert sequence Length = 4190 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2266 ggccacagctcctctccctgcccac 2290
>gb|AC103826.2| Homo sapiens chromosome 8, clone CTD-2054L19, complete sequence Length = 75715 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1300 tcatgaagatttgacttgttg 1320 ||||||||||||||||||||| Sbjct: 69590 tcatgaagatttgacttgttg 69570
>dbj|AK040912.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530044H24 product:Leman coiled-coil protein, full insert sequence Length = 4019 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2351 ggccacagctcctctccctgcccac 2375
>gb|AF389852.1| Homo sapiens psoriasis susceptibility gene candidate interval, partial sequence Length = 34308 Score = 42.1 bits (21), Expect = 9.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1967 agatcacaggacagagacgagcaactgaa 1995 |||| ||||||||||||||| |||||||| Sbjct: 9826 agatgacaggacagagacgaacaactgaa 9798
>gb|AF175968.1| Mus musculus angiomotin-like protein 2 variant 2 (Amotl2) mRNA, complete cds Length = 4349 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2410 ggccacagctcctctccctgcccac 2434
>gb|AF175967.1| Mus musculus angiomotin-like protein 2 variant 1 (Amotl2) mRNA, partial cds Length = 3492 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 1553 ggccacagctcctctccctgcccac 1577
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1693 aacttttgaggttcttgaaccaaac 1717 ||||||||| ||||||||||||||| Sbjct: 143985 aacttttgaagttcttgaaccaaac 143961
>gb|BC035201.1| Mus musculus angiomotin like 2, mRNA (cDNA clone IMAGE:4164755), partial cds Length = 4183 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2252 ggccacagctcctctccctgcccac 2276
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcggagctggcggcggcgctg 188 ||||||||||||||||||||| Sbjct: 3951181 gcggagctggcggcggcgctg 3951161
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 tgtccgcggcgtcgcaggcgc 131 ||||||||||||||||||||| Sbjct: 47035 tgtccgcggcgtcgcaggcgc 47015 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gcggagctggcggcggcgctg 188 ||||||||||||||||||||| Sbjct: 170429 gcggagctggcggcggcgctg 170409
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cggagctggcggcggcgctgg 189 ||||||||||||||||||||| Sbjct: 197052 cggagctggcggcggcgctgg 197032
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone BACR27L16, complete sequence Length = 182623 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1175 ttggttcattttatggatatt 1195 ||||||||||||||||||||| Sbjct: 30610 ttggttcattttatggatatt 30590
>emb|CR860406.1| Pongo pygmaeus mRNA; cDNA DKFZp459D1223 (from clone DKFZp459D1223) Length = 3447 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 146 ggaggtgaaggtgtccgcggcgtcg 170
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ggagctggcggcggcgctggg 190 ||||||||||||||||||||| Sbjct: 3075894 ggagctggcggcggcgctggg 3075914
>gb|AC117488.11| Homo sapiens 3 BAC CTD-2015F14 (Cal Tech Human BAC Library D) complete sequence Length = 47028 Score = 42.1 bits (21), Expect = 9.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1967 agatcacaggacagagacgagcaactgaa 1995 |||| ||||||||||||||| |||||||| Sbjct: 4170 agatgacaggacagagacgaacaactgaa 4198
>ref|NM_211431.1| Eremothecium gossypii AGL298Cp (AGL298C), mRNA Length = 3348 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1693 aacttttgaggttcttgaaccaaac 1717 ||||||||| ||||||||||||||| Sbjct: 3272 aacttttgaagttcttgaaccaaac 3296
>gb|BC011621.2| Homo sapiens hook homolog 1 (Drosophila), mRNA (cDNA clone MGC:10642 IMAGE:3959931), complete cds Length = 2480 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 214 ggaggtgaaggtgtccgcggcgtcg 238
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 ggagctggcggcggcgctggg 190 ||||||||||||||||||||| Sbjct: 356268 ggagctggcggcggcgctggg 356248
>gb|AF044923.1|AF044923 Homo sapiens hook1 protein (HOOK1) mRNA, complete cds Length = 2408 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ggaggcgaaggtgtccgcggcgtcg 124 ||||| ||||||||||||||||||| Sbjct: 156 ggaggtgaaggtgtccgcggcgtcg 180
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tcctcctggattatcaggcaa 503 ||||||||||||||||||||| Sbjct: 44574 tcctcctggattatcaggcaa 44594
>gb|U73678.1|GGU73678 Gallus gallus alpha-1,3-fucosyltransferase (CFT1) gene, complete cds Length = 2657 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ccgcggagctggcggcggcgctggg 190 |||||||| |||||||||||||||| Sbjct: 215 ccgcggaggtggcggcggcgctggg 239
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete sequence Length = 199060 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1541 tttcactgcaaacatgttagt 1561 ||||||||||||||||||||| Sbjct: 193266 tttcactgcaaacatgttagt 193246
>gb|BC108411.1| Mus musculus cDNA clone IMAGE:6333281 Length = 4238 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 2304 ggccacagctcctctccctgcccac 2328
>emb|AL807821.8| Mouse DNA sequence from clone RP23-28N5 on chromosome X, complete sequence Length = 171451 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1212 caaagaaaccagaagatatat 1232 ||||||||||||||||||||| Sbjct: 14392 caaagaaaccagaagatatat 14372
>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete sequence Length = 213625 Score = 42.1 bits (21), Expect = 9.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tcctcctggattatcaggcaa 503 ||||||||||||||||||||| Sbjct: 84251 tcctcctggattatcaggcaa 84271
>gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosome 9, complete sequence Length = 198367 Score = 42.1 bits (21), Expect = 9.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ggccaccgctcctctccctgcccac 25 |||||| |||||||||||||||||| Sbjct: 185845 ggccacagctcctctccctgcccac 185821 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 434,475,250 Number of extensions: 22949021 Number of successful extensions: 165393 Number of sequences better than 10.0: 74 Number of HSP's gapped: 165385 Number of HSP's successfully gapped: 168 Length of query: 2504 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2481 Effective length of database: 18,503,978,556 Effective search space: 45908370797436 Effective search space used: 45908370797436 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
