| Clone Name | FLbaf139j10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105577:Os08g0469700 | 33 | 0.56 | 2 | AK060284:Os12g0224000 | 27 | 0.68 | 3 | AK072224:Os04g0396800 | 30 | 3.6 | 4 | AK070195:Os04g0396800 | 30 | 3.6 | 5 | AK062632:Os04g0396800 | 30 | 3.6 | 6 | Os06g0174300:Os06g0174300 | 25 | 4.1 | 7 | AK105715:Os02g0101300 | 29 | 8.1 |
|---|
>AK105577:Os08g0469700 | Length = 279 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 598 LRHGH*PRTVRRCWAEGREAGAWSTTAGGRGIVSGTCERGAR*AGEERDHERMEMGCWRE 777 LRHGH V R ++ AG W+ GI + TC G+ AGE + + +GC+ Sbjct: 93 LRHGH---GVYRFYSGDCYAGEWAA-GQSHGIGAQTCSDGSSYAGEFKGGVKHGLGCYHF 148 Query: 778 R---EWSGE 795 R +SGE Sbjct: 149 RNGDRYSGE 157
>AK060284:Os12g0224000 | Length = 212 Score = 27.3 bits (59), Expect(2) = 0.68 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 14/71 (19%) Frame = -2 Query: 1041 ELFTNAKHHLDQHEYVNAH-KFLQINCLTGGWSFCKLS---SSGHVCPRGA--------- 901 +L+ N H D + H K L++ C++G W KL S H +G Sbjct: 123 DLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHSS 182 Query: 900 -PLLVNSGPWL 871 P+ V+ PW+ Sbjct: 183 FPVQVDGEPWI 193 Score = 23.9 bits (50), Expect(2) = 0.68 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -1 Query: 1183 VSLELNGNNLVGPTDRKRMNILHLTIYL 1100 VSLE++G N+ P D + + +L++ Y+ Sbjct: 92 VSLEVDGKNVEIPEDAEGVIVLNIPSYM 119
>AK072224:Os04g0396800 | Length = 390 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720 R W EGR+ G W+ + GG G +S RGA Sbjct: 332 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 360
>AK070195:Os04g0396800 | Length = 470 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720 R W EGR+ G W+ + GG G +S RGA Sbjct: 412 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 440
>AK062632:Os04g0396800 | Length = 174 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720 R W EGR+ G W+ + GG G +S RGA Sbjct: 116 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 144
>Os06g0174300:Os06g0174300 | Length = 1798 Score = 25.4 bits (54), Expect(2) = 4.1 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +1 Query: 640 AEGREAG---AWSTTAGGRGIVSGTCERGAR*AG 732 ++GR G +WS AGG G ERGAR G Sbjct: 205 SDGRRGGRGRSWSAAAGGGGEWRRGKERGARQRG 238 Score = 22.7 bits (47), Expect(2) = 4.1 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +3 Query: 732 RGKG-PR--EDGDGMLEGERMERRDVAVLQLLL 821 RG G PR E G G EGER RR V L L Sbjct: 257 RGGGEPRHLEGGQGQREGERRRRRRRGVSPLPL 289
>AK105715:Os02g0101300 | Length = 118 Score = 28.9 bits (63), Expect = 8.1 Identities = 25/83 (30%), Positives = 32/83 (38%) Frame = +1 Query: 640 AEGREAGAWSTTAGGRGIVSGTCERGAR*AGEERDHERMEMGCWREREWSGEMWRCSSCC 819 A AGA+S + G+ GT RG R R R +W + RCS C Sbjct: 27 ARSSTAGAFSELSHGK---KGTRGRGRRRRRGRRRAVRARGSV--ASQWGQLLLRCSICS 81 Query: 820 CSLAIGRPELRPVHHVVKPRSRI 888 CS A LR R+R+ Sbjct: 82 CSAASSASALRSRRASSSSRTRV 104 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,027,834 Number of extensions: 655836 Number of successful extensions: 2445 Number of sequences better than 10.0: 7 Number of HSP's gapped: 2440 Number of HSP's successfully gapped: 9 Length of query: 420 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 317 Effective length of database: 11,275,632 Effective search space: 3574375344 Effective search space used: 3574375344 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)