ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf139j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK105577:Os08g0469700 33 0.56
2AK060284:Os12g0224000 27 0.68
3AK072224:Os04g0396800 30 3.6
4AK070195:Os04g0396800 30 3.6
5AK062632:Os04g0396800 30 3.6
6Os06g0174300:Os06g0174300 25 4.1
7AK105715:Os02g0101300 29 8.1

>AK105577:Os08g0469700 |
          Length = 279
 Score = 32.7 bits (73), Expect = 0.56
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 598 LRHGH*PRTVRRCWAEGREAGAWSTTAGGRGIVSGTCERGAR*AGEERDHERMEMGCWRE 777
           LRHGH    V R ++    AG W+      GI + TC  G+  AGE +   +  +GC+  
Sbjct: 93  LRHGH---GVYRFYSGDCYAGEWAA-GQSHGIGAQTCSDGSSYAGEFKGGVKHGLGCYHF 148

Query: 778 R---EWSGE 795
           R    +SGE
Sbjct: 149 RNGDRYSGE 157



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>AK060284:Os12g0224000 |
          Length = 212

 Score = 27.3 bits (59), Expect(2) = 0.68
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
 Frame = -2

Query: 1041 ELFTNAKHHLDQHEYVNAH-KFLQINCLTGGWSFCKLS---SSGHVCPRGA--------- 901
            +L+ N   H D     + H K L++ C++G W   KL    S  H   +G          
Sbjct: 123  DLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHSS 182

Query: 900  -PLLVNSGPWL 871
             P+ V+  PW+
Sbjct: 183  FPVQVDGEPWI 193



 Score = 23.9 bits (50), Expect(2) = 0.68
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -1

Query: 1183 VSLELNGNNLVGPTDRKRMNILHLTIYL 1100
            VSLE++G N+  P D + + +L++  Y+
Sbjct: 92   VSLEVDGKNVEIPEDAEGVIVLNIPSYM 119



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>AK072224:Os04g0396800 |
          Length = 390

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720
           R W EGR+ G W+ + GG G +S    RGA
Sbjct: 332 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 360



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>AK070195:Os04g0396800 |
          Length = 470

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720
           R W EGR+ G W+ + GG G +S    RGA
Sbjct: 412 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 440



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>AK062632:Os04g0396800 |
          Length = 174

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 631 RCWAEGREAGAWSTTAGGRGIVSGTCERGA 720
           R W EGR+ G W+ + GG G +S    RGA
Sbjct: 116 RVWFEGRQVGGWTQSFGG-GALSFATVRGA 144



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>Os06g0174300:Os06g0174300 |
          Length = 1798

 Score = 25.4 bits (54), Expect(2) = 4.1
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 640 AEGREAG---AWSTTAGGRGIVSGTCERGAR*AG 732
           ++GR  G   +WS  AGG G      ERGAR  G
Sbjct: 205 SDGRRGGRGRSWSAAAGGGGEWRRGKERGARQRG 238



 Score = 22.7 bits (47), Expect(2) = 4.1
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = +3

Query: 732 RGKG-PR--EDGDGMLEGERMERRDVAVLQLLL 821
           RG G PR  E G G  EGER  RR   V  L L
Sbjct: 257 RGGGEPRHLEGGQGQREGERRRRRRRGVSPLPL 289



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>AK105715:Os02g0101300 |
          Length = 118

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 25/83 (30%), Positives = 32/83 (38%)
 Frame = +1

Query: 640 AEGREAGAWSTTAGGRGIVSGTCERGAR*AGEERDHERMEMGCWREREWSGEMWRCSSCC 819
           A    AGA+S  + G+    GT  RG R     R   R         +W   + RCS C 
Sbjct: 27  ARSSTAGAFSELSHGK---KGTRGRGRRRRRGRRRAVRARGSV--ASQWGQLLLRCSICS 81

Query: 820 CSLAIGRPELRPVHHVVKPRSRI 888
           CS A     LR        R+R+
Sbjct: 82  CSAASSASALRSRRASSSSRTRV 104


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,027,834
Number of extensions: 655836
Number of successful extensions: 2445
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2440
Number of HSP's successfully gapped: 9
Length of query: 420
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 317
Effective length of database: 11,275,632
Effective search space: 3574375344
Effective search space used: 3574375344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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