ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf132c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P92792:TOM20_SOLTU Mitochondrial import receptor subunit TOM20 -... 63 1e-09
2P82805:TO204_ARATH Mitochondrial import receptor subunit TOM20-4... 63 1e-09
3P82874:TO203_ARATH Mitochondrial import receptor subunit TOM20-3... 55 2e-07
4P82872:TO201_ARATH Mitochondrial import receptor subunit TOM20-1... 54 9e-07
5P82873:TO202_ARATH Mitochondrial import receptor subunit TOM20-2... 53 1e-06
6O75665:OFD1_HUMAN Oral-facial-digital syndrome 1 protein - Homo ... 32 2.7
7Q1RGK5:HEMH_RICBR Ferrochelatase - Rickettsia bellii (strain RML... 31 6.0
8Q5KVC0:LGT_GEOKA Prolipoprotein diacylglyceryl transferase - Geo... 30 7.8
9Q9ULK2:AT7L1_HUMAN Ataxin-7-like protein 1 - Homo sapiens (Human) 30 7.9

>P92792:TOM20_SOLTU Mitochondrial import receptor subunit TOM20 - Solanum tuberosum|
           (Potato)
          Length = 204
 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +3

Query: 93  ERLFFFYLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPES 230
           +RL FF  A K+A+ TY +NPLDADNLTRWGGALLELSQ     ES
Sbjct: 8   DRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAES 53



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>P82805:TO204_ARATH Mitochondrial import receptor subunit TOM20-4 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 187

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +3

Query: 84  NDPERLFFFYLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEAL 251
           N+ ERL  F  A K A+ATY +NPLDA+NLTRW GALLELSQ    P+ +  LEA+
Sbjct: 5   NENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEPKQM-ILEAI 59



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>P82874:TO203_ARATH Mitochondrial import receptor subunit TOM20-3 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 202

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = +3

Query: 93  ERLFFFYLACKTAKATYDENPLDADNLTRWGGALLELSQMHN 218
           +R+  F    + A+ TY  NPLDADNLTRWGG LLELSQ H+
Sbjct: 8   DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHS 49



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>P82872:TO201_ARATH Mitochondrial import receptor subunit TOM20-1 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 188

 Score = 53.5 bits (127), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +3

Query: 93  ERLFFFYLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLE 245
           ++L FF    K A+ TY  NP DADNL RWG ALLELSQ  N  +SLK ++
Sbjct: 2   DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQ 52



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>P82873:TO202_ARATH Mitochondrial import receptor subunit TOM20-2 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 210

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = +3

Query: 87  DPERLFFFYLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPES 230
           D ERL  F  A K ++A Y  +PLD++NL +WGGALLELSQ    PE+
Sbjct: 7   DFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEA 54



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>O75665:OFD1_HUMAN Oral-facial-digital syndrome 1 protein - Homo sapiens (Human)|
          Length = 1012

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 696 LSQRLEFFLDTELVVTKSALN*KYLKNITYYQNIKKKS 583
           + Q+L+FF DTE+   K     KY K +T +QN  +K+
Sbjct: 215 MCQKLKFFKDTEIAKIKMEAKKKYEKELTMFQNDFEKA 252



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>Q1RGK5:HEMH_RICBR Ferrochelatase - Rickettsia bellii (strain RML369-C)|
          Length = 354

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = +2

Query: 470 VLATKASTKYSCTP*LCNNKITTPSLSSI*TKFCN 574
           ++A K   KY+ TP L  NKI   SL+SI  KF N
Sbjct: 282 LIADKYKIKYNRTPTLSTNKIFIKSLTSILLKFIN 316



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>Q5KVC0:LGT_GEOKA Prolipoprotein diacylglyceryl transferase - Geobacillus|
           kaustophilus
          Length = 270

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 RWGGALLELSQMHNGPESLKCLEALHVWLPNWIIS 281
           RWG  + +  + H GP S + LE LH  LP+WII+
Sbjct: 137 RWGNFMNQ--EAHGGPVSRQFLENLH--LPDWIIN 167



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>Q9ULK2:AT7L1_HUMAN Ataxin-7-like protein 1 - Homo sapiens (Human)|
          Length = 864

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 330 DRTTQSEGHILEDSRRKI*SNLGATHVALRGTSGSPGRYASATTPAARRP 181
           ++  + + H+L  +R  + S  G    +L G+SGS G      +PA  RP
Sbjct: 348 EKEVKDKEHLLTSTREILPSQSGPAQDSLLGSSGSSGPEPKVASPAKSRP 397


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 115,474,869
Number of extensions: 2290960
Number of successful extensions: 5820
Number of sequences better than 10.0: 9
Number of HSP's gapped: 5820
Number of HSP's successfully gapped: 9
Length of query: 256
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 145
Effective length of database: 70,239,694
Effective search space: 10184755630
Effective search space used: 10184755630
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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