ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf112i05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.016
2dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.016
3dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.016
4gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 44 0.97
5ref|NM_123548.1| Arabidopsis thaliana unknown protein (AT5G41830... 44 0.97
6ref|NM_116254.2| Arabidopsis thaliana unknown protein (AT4G00320... 44 0.97
7gb|BT009138.1| Triticum aestivum clone wl1n.pk0042.d3:fis, full ... 44 0.97
8ref|XM_460195.1| Debaryomyces hansenii CBS767 hypothetical prote... 44 0.97
9gb|AC007178.6| Arabidopsis thaliana chromosome 2 clone F3L12 map... 44 0.97
10emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 44 0.97
11emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, c... 44 0.97
12dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.97
13gb|AF195115.1|F5I10 Arabidopsis thaliana BAC F5I10 44 0.97
14gb|AY108650.1| Zea mays PCO072650 mRNA sequence 44 0.97
15gb|AF013293.1|IG005I10 Arabidopsis thaliana BAC IG005I10 44 0.97
16gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome 42 3.8
17gb|AC168849.26| Medicago truncatula chromosome 8 clone mth2-69p1... 42 3.8
18gb|DQ971411.1| Arabidopsis thaliana small RNA Ath_wt_20855, comp... 42 3.8
19gb|DQ965511.1| Arabidopsis thaliana small RNA Ath_wt_14955, comp... 42 3.8
20gb|DQ942105.1| Arabidopsis thaliana small RNA AGO4_08183, comple... 42 3.8
21gb|AC149639.22| Medicago truncatula chromosome 8 clone mth2-154b... 42 3.8
22gb|AC135314.18| Medicago truncatula clone mth2-26l3, complete se... 42 3.8
23emb|CT573353.14| M.truncatula DNA sequence from clone MTH2-124L2... 42 3.8
24gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete se... 42 3.8
25emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a... 42 3.8
26gb|AC006675.2| Caenorhabditis elegans cosmid M02H5, complete seq... 42 3.8
27gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-6... 42 3.8
28gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.8
29ref|XM_716988.1| Candida albicans SC5314 cyclin (CaO19_11495), mRNA 42 3.8
30ref|XM_716827.1| Candida albicans SC5314 cyclin (CaO19_4012), mRNA 42 3.8
31gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete s... 42 3.8
32gb|AC140034.14| Medicago truncatula clone mth2-17g19, complete s... 42 3.8
33gb|AY552546.1| Ipomoea batatas Kunitz-type trypsin inhibitor mRN... 42 3.8
34gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence 42 3.8
35gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete ... 42 3.8
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
38emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA ... 42 3.8
39emb|AL672177.9| Mouse DNA sequence from clone RP23-292D8 on chro... 42 3.8
40emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, ... 42 3.8
41emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 42 3.8
42emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, ... 42 3.8
43emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, ... 42 3.8
44emb|AL138641.2|ATT22K7 Arabidopsis thaliana DNA chromosome 3, BA... 42 3.8
45emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, B... 42 3.8
46emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, B... 42 3.8
47emb|AL138654.1|ATF18P9 Arabidopsis thaliana DNA chromosome 3, BA... 42 3.8
48emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BA... 42 3.8
49emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BA... 42 3.8
50emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BA... 42 3.8
51emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC... 42 3.8
52gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A... 42 3.8
53gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone ... 42 3.8
54gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete se... 42 3.8
55gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana... 42 3.8
56gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana... 42 3.8
57gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis tha... 42 3.8
58gb|AC144724.9| Medicago truncatula clone mth2-7g10, complete seq... 42 3.8
59gb|AC149808.12| Medicago truncatula clone mth2-154g23, complete ... 42 3.8
60gb|AC152405.15| Medicago truncatula clone mth2-49f2, complete se... 42 3.8
61gb|AC155891.2| Medicago truncatula chromosome 2 BAC clone mth2-4... 42 3.8
62gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete s... 42 3.8
63gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete s... 42 3.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651
 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 61       tttctaacacgttatcagcacgctc 85
                |||||||||||||||||||||||||
Sbjct: 13198990 tttctaacacgttatcagcacgctc 13199014
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 61    tttctaacacgttatcagcacgctc 85
             |||||||||||||||||||||||||
Sbjct: 20424 tttctaacacgttatcagcacgctc 20448
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>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0048A13
          Length = 137680

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 61     tttctaacacgttatcagcacgctc 85
              |||||||||||||||||||||||||
Sbjct: 121080 tttctaacacgttatcagcacgctc 121104
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4011981 cggaagcagcggcggcggaagc 4012002



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4011996 cggaagcagcggcggcggaagc 4012017



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012011 cggaagcagcggcggcggaagc 4012032



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012026 cggaagcagcggcggcggaagc 4012047



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012041 cggaagcagcggcggcggaagc 4012062



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012056 cggaagcagcggcggcggaagc 4012077



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012086 cggaagcagcggcggcggaagc 4012107



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012101 cggaagcagcggcggcggaagc 4012122



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012116 cggaagcagcggcggcggaagc 4012137



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012131 cggaagcagcggcggcggaagc 4012152



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012146 cggaagcagcggcggcggaagc 4012167



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012161 cggaagcagcggcggcggaagc 4012182



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012176 cggaagcagcggcggcggaagc 4012197



 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 212     cggaagcagcggcggcggaagc 233
               ||||||||||||||||||||||
Sbjct: 4012206 cggaagcagcggcggcggaagc 4012227
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>ref|NM_123548.1| Arabidopsis thaliana unknown protein (AT5G41830) mRNA, complete cds
          Length = 1392

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 864  accctcatattatccagatttt 885
            ||||||||||||||||||||||
Sbjct: 1052 accctcatattatccagatttt 1031
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>ref|NM_116254.2| Arabidopsis thaliana unknown protein (AT4G00320) mRNA, complete cds
          Length = 1524

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 864  accctcatattatccagatttt 885
            ||||||||||||||||||||||
Sbjct: 1211 accctcatattatccagatttt 1190
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>gb|BT009138.1| Triticum aestivum clone wl1n.pk0042.d3:fis, full insert mRNA
           sequence
          Length = 587

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 214 gaagcagcggcggcggaagccg 235
           ||||||||||||||||||||||
Sbjct: 292 gaagcagcggcggcggaagccg 271
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>ref|XM_460195.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E21714g)
           partial mRNA
          Length = 3039

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 724 aatcaaccagaggaagaagaaa 745
           ||||||||||||||||||||||
Sbjct: 940 aatcaaccagaggaagaagaaa 961
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>gb|AC007178.6| Arabidopsis thaliana chromosome 2 clone F3L12 map mi320, complete
             sequence
          Length = 116149

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    tttctaacacgttatcagcacg 82
             ||||||||||||||||||||||
Sbjct: 10512 tttctaacacgttatcagcacg 10533



 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 8823 taacacgttatcagcacgctc 8803
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 724     aatcaaccagaggaagaagaaa 745
               ||||||||||||||||||||||
Sbjct: 1705066 aatcaaccagaggaagaagaaa 1705045
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>emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 1
          Length = 197119

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 864    accctcatattatccagatttt 885
              ||||||||||||||||||||||
Sbjct: 140330 accctcatattatccagatttt 140309
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>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22
          Length = 79109

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 864   accctcatattatccagatttt 885
             ||||||||||||||||||||||
Sbjct: 45444 accctcatattatccagatttt 45465
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>gb|AF195115.1|F5I10 Arabidopsis thaliana BAC F5I10
          Length = 111906

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 864   accctcatattatccagatttt 885
             ||||||||||||||||||||||
Sbjct: 40849 accctcatattatccagatttt 40828
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>gb|AY108650.1| Zea mays PCO072650 mRNA sequence
          Length = 540

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 214 gaagcagcggcggcggaagccg 235
           ||||||||||||||||||||||
Sbjct: 299 gaagcagcggcggcggaagccg 278
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>gb|AF013293.1|IG005I10 Arabidopsis thaliana BAC IG005I10
          Length = 111906

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 864   accctcatattatccagatttt 885
             ||||||||||||||||||||||
Sbjct: 71058 accctcatattatccagatttt 71079
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>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome
          Length = 5631606

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 264     cggagcggcggcccttggcca 284
               |||||||||||||||||||||
Sbjct: 1057029 cggagcggcggcccttggcca 1057049
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>gb|AC168849.26| Medicago truncatula chromosome 8 clone mth2-69p13, complete sequence
          Length = 151245

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     taacacgttatcagcacgctc 85
              |||||||||||||||||||||
Sbjct: 116750 taacacgttatcagcacgctc 116770
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>gb|DQ971411.1| Arabidopsis thaliana small RNA Ath_wt_20855, complete sequence
          Length = 24

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 65 taacacgttatcagcacgctc 85
          |||||||||||||||||||||
Sbjct: 22 taacacgttatcagcacgctc 2
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>gb|DQ965511.1| Arabidopsis thaliana small RNA Ath_wt_14955, complete sequence
          Length = 23

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 65 taacacgttatcagcacgctc 85
          |||||||||||||||||||||
Sbjct: 1  taacacgttatcagcacgctc 21
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>gb|DQ942105.1| Arabidopsis thaliana small RNA AGO4_08183, complete sequence
          Length = 22

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 65 taacacgttatcagcacgctc 85
          |||||||||||||||||||||
Sbjct: 22 taacacgttatcagcacgctc 2
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>gb|AC149639.22| Medicago truncatula chromosome 8 clone mth2-154b23, complete sequence
          Length = 112385

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 7227 taacacgttatcagcacgctc 7247
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>gb|AC135314.18| Medicago truncatula clone mth2-26l3, complete sequence
          Length = 120150

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 55785 taacacgttatcagcacgctc 55765
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>emb|CT573353.14| M.truncatula DNA sequence from clone MTH2-124L21 on chromosome 3,
             complete sequence
          Length = 147535

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 77205 taacacgttatcagcacgctc 77225
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>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence
          Length = 96907

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 77698 taacacgttatcagcacgctc 77718
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>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE
          Length = 128818

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 17557 taacacgttatcagcacgctc 17537
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>gb|AC006675.2| Caenorhabditis elegans cosmid M02H5, complete sequence
          Length = 35420

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 779   ttttgtccttccattttctct 799
             |||||||||||||||||||||
Sbjct: 20724 ttttgtccttccattttctct 20744
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>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete sequence
          Length = 103090

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 70210 taacacgttatcagcacgctc 70230
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>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
             complete sequence
          Length = 155106

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    ttctaacacgttatcagcacg 82
             |||||||||||||||||||||
Sbjct: 25686 ttctaacacgttatcagcacg 25706
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>ref|XM_716988.1| Candida albicans SC5314 cyclin (CaO19_11495), mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  ttccattcaatcacttcaatt 62
           |||||||||||||||||||||
Sbjct: 336 ttccattcaatcacttcaatt 356
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>ref|XM_716827.1| Candida albicans SC5314 cyclin (CaO19_4012), mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  ttccattcaatcacttcaatt 62
           |||||||||||||||||||||
Sbjct: 336 ttccattcaatcacttcaatt 356
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>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 13275 taacacgttatcagcacgctc 13295
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>gb|AC140034.14| Medicago truncatula clone mth2-17g19, complete sequence
          Length = 83825

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 56157 taacacgttatcagcacgctc 56177
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>gb|AY552546.1| Ipomoea batatas Kunitz-type trypsin inhibitor mRNA, complete cds
          Length = 513

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 214 gaagcagcggcggcggaagcc 234
           |||||||||||||||||||||
Sbjct: 294 gaagcagcggcggcggaagcc 274
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>gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence
          Length = 83679

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 38794 taacacgttatcagcacgctc 38814
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>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence
          Length = 94766

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 61540 taacacgttatcagcacgctc 61560
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 62      ttctaacacgttatcagcacg 82
               |||||||||||||||||||||
Sbjct: 5111183 ttctaacacgttatcagcacg 5111203
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 62       ttctaacacgttatcagcacg 82
                |||||||||||||||||||||
Sbjct: 20310856 ttctaacacgttatcagcacg 20310836
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>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7
          Length = 201471

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     taacacgttatcagcacgctc 85
              |||||||||||||||||||||
Sbjct: 133515 taacacgttatcagcacgctc 133535
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>emb|AL672177.9| Mouse DNA sequence from clone RP23-292D8 on chromosome 11 Contains the
             3' end of the Gria1 gene for glutamate receptor,
             ionotropic, AMPA1 (alpha 1), complete sequence
          Length = 157692

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 935   atgtgtatatttatgtgtaga 955
             |||||||||||||||||||||
Sbjct: 26926 atgtgtatatttatgtgtaga 26906
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>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52
          Length = 198427

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 97256 taacacgttatcagcacgctc 97276
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>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     taacacgttatcagcacgctc 85
              |||||||||||||||||||||
Sbjct: 119344 taacacgttatcagcacgctc 119364
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>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36
          Length = 199634

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     taacacgttatcagcacgctc 85
              |||||||||||||||||||||
Sbjct: 103724 taacacgttatcagcacgctc 103744
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>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
          Length = 196107

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 31746 taacacgttatcagcacgctc 31766
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>emb|AL138641.2|ATT22K7 Arabidopsis thaliana DNA chromosome 3, BAC clone T22K7
          Length = 82316

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 72409 taacacgttatcagcacgctc 72389
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>emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, BAC clone T20E23
          Length = 83513

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 24362 taacacgttatcagcacgctc 24382
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>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
          Length = 140680

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 85433 taacacgttatcagcacgctc 85413
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>emb|AL138654.1|ATF18P9 Arabidopsis thaliana DNA chromosome 3, BAC clone F18P9
          Length = 95996

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 22261 taacacgttatcagcacgctc 22241
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>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project)
          Length = 137519

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 27214 taacacgttatcagcacgctc 27234
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>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project)
          Length = 111945

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 29833 taacacgttatcagcacgctc 29853
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>emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BAC clone  T6G15 (ESSA
            project)
          Length = 113970

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 1517 taacacgttatcagcacgctc 1537
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>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence
             (ESSA project)
          Length = 95432

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 87745 taacacgttatcagcacgctc 87765
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>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete
              sequence
          Length = 156929

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ttctaacacgttatcagcacg 82
              |||||||||||||||||||||
Sbjct: 113134 ttctaacacgttatcagcacg 113114
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>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete
              sequence
          Length = 128256

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ttctaacacgttatcagcacg 82
              |||||||||||||||||||||
Sbjct: 102742 ttctaacacgttatcagcacg 102722
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>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 65458 taacacgttatcagcacgctc 65478
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>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I,
             complete sequence
          Length = 120977

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 37548 taacacgttatcagcacgctc 37568
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>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I,
             complete sequence
          Length = 87508

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 13445 taacacgttatcagcacgctc 13465
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>gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74328

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 57781 taacacgttatcagcacgctc 57761
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>gb|AC144724.9| Medicago truncatula clone mth2-7g10, complete sequence
          Length = 106731

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 4053 taacacgttatcagcacgctc 4033
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>gb|AC149808.12| Medicago truncatula clone mth2-154g23, complete sequence
          Length = 64610

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 7379 taacacgttatcagcacgctc 7359
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>gb|AC152405.15| Medicago truncatula clone mth2-49f2, complete sequence
          Length = 126818

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    taacacgttatcagcacgctc 85
             |||||||||||||||||||||
Sbjct: 36230 taacacgttatcagcacgctc 36250
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>gb|AC155891.2| Medicago truncatula chromosome 2 BAC clone mth2-4g10, complete sequence
          Length = 148303

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     taacacgttatcagcacgctc 85
              |||||||||||||||||||||
Sbjct: 136247 taacacgttatcagcacgctc 136267
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>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence
          Length = 123626

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 7504 taacacgttatcagcacgctc 7524
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>gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete sequence
          Length = 105458

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taacacgttatcagcacgctc 85
            |||||||||||||||||||||
Sbjct: 3242 taacacgttatcagcacgctc 3222


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 156,033,055
Number of extensions: 8399034
Number of successful extensions: 171538
Number of sequences better than 10.0: 63
Number of HSP's gapped: 171538
Number of HSP's successfully gapped: 77
Length of query: 1012
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 989
Effective length of database: 18,503,978,556
Effective search space: 18300434791884
Effective search space used: 18300434791884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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