ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf112c24 |
|---|---|
| Clone Library Name | barley_pub |
>Q96BZ8:LENG1_HUMAN Leukocyte receptor cluster member 1 - Homo sapiens (Human)| Length = 264 Score = 35.0 bits (79), Expect = 1.7 Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 9/108 (8%) Frame = +2 Query: 230 GPPPS---HWSVQSWAAPFK------GRTPGGGGDQAKPQRKEQE*ERTNTPKHHPSLVL 382 GPPP ++S P + G+ GGD+ RKE+E PK PSL Sbjct: 139 GPPPGPAPDEKIKSRLDPLREMQKHLGKKRQHGGDEGSRSRKEKEGSEKQRPKEPPSLDQ 198 Query: 383 LHCAPSQREGDRAAVASALQPCPFSACLSAAPSRPRGPTDGRRKCNLQ 526 L +RE + A AL L D RR+ N Q Sbjct: 199 LRAERLRREAAERSRAEALLARVQGRALQEGQPEEDETDDRRRRYNSQ 246
>P05142:PRP2_MOUSE Proline-rich protein MP-2 precursor - Mus musculus (Mouse)| Length = 261 Score = 35.0 bits (79), Expect = 1.7 Identities = 21/48 (43%), Positives = 22/48 (45%) Frame = -1 Query: 303 PPPPGVLPLNGAAQLCTLQWEGGGPKAAAPQRREKHKPPPPSAYQPMP 160 P PP P G QL Q G P A PQ R PPPP+ QP P Sbjct: 130 PRPPQGPPPPGGPQLRPPQ---GPPPPAGPQPRPPQGPPPPAGPQPRP 174 Score = 34.7 bits (78), Expect = 2.2 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Frame = -1 Query: 303 PPPPGVLP---LNGAAQLCTLQWEGGGPKAAAPQRREKHKPPPPSAYQPMP 160 PPP G P +NG+ Q G P PQ R PPPP QP P Sbjct: 34 PPPSGFQPRPPVNGSQQ--------GPPPPGGPQPRPPQGPPPPGGPQPRP 76
>Q8WUM4:PDC6I_HUMAN Programmed cell death 6-interacting protein - Homo sapiens (Human)| Length = 868 Score = 34.7 bits (78), Expect = 2.2 Identities = 21/60 (35%), Positives = 24/60 (40%) Frame = -1 Query: 300 PPPGVLPLNGAAQLCTLQWEGGGPKAAAPQRREKHKPPPPSAYQPMPLLCAQKGNALCQL 121 PPP VLP N A G G A AP + PPP + P P G CQ+ Sbjct: 758 PPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGPPYPTYPGYPG--YCQM 815
>P53189:SCW11_YEAST Probable family 17 glucosidase SCW11 precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 542 Score = 34.3 bits (77), Expect = 2.9 Identities = 21/84 (25%), Positives = 35/84 (41%) Frame = +2 Query: 800 ILSGMQMSTDPNHYGVFPHSFFGQHVVSFQTSAITNGPGAMPVCLDTSSGINGNLAMLNT 979 +L +MST S Q SFQ + + S+G + ++ L T Sbjct: 91 LLKKAEMSTSSQPTSTLQPSTIPQSTSSFQAESTLQAVSTQQTAMSVSAGTSEDVQQLAT 150 Query: 980 TPSTIVSTASPNMIPDSSQSLKYG 1051 T ++I S+ SP S+Q++ G Sbjct: 151 TSTSISSSPSPTTTSTSTQNIVSG 174
>P05143:PMP3_MOUSE Proline-rich protein MP-3 - Mus musculus (Mouse)| Length = 296 Score = 34.3 bits (77), Expect = 2.9 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Frame = -1 Query: 303 PPPPGVLP---LNGAAQLCTLQWEGGGPKAAAPQRREKHKPPPPSAYQPMP 160 PPP G P +NG+ Q G P PQ R PPPP QP P Sbjct: 13 PPPSGSQPRPPVNGSQQ--------GPPPPGGPQPRPPQGPPPPGGPQPRP 55
>P46105:ACT22_STRCO Probable actinorhodin transporter - Streptomyces coelicolor| Length = 578 Score = 34.3 bits (77), Expect = 2.9 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 1074 DHSTAIGPPYFRLWLESGIMLGEAVDTIVEGVVFNIA 964 D + A PPY R W G++LG + +++G V N+A Sbjct: 28 DGTAAGPPPYARRWAALGVILGAEIMDLLDGTVMNVA 64
>Q9C086:ZNHI4_HUMAN Zinc finger HIT domain-containing protein 4 - Homo sapiens (Human)| Length = 343 Score = 33.9 bits (76), Expect = 3.8 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -1 Query: 300 PPPGVLPLNGAAQLCTLQWEGGGPK-AAAPQRREKHKPPP----PSAYQPMPLLCAQKGN 136 P P V +GA Q TL + G P A QR PPP P P C++ G Sbjct: 256 PAPMVRYCSGA-QGSTLSFPPGVPAPTAVSQRPSPSGPPPRCSVPGCPHPRRYACSRTGQ 314 Query: 135 ALCQLHC 115 ALC L C Sbjct: 315 ALCSLQC 321
>Q99PT3:ZNHI4_MOUSE Zinc finger HIT domain-containing protein 4 - Mus musculus (Mouse)| Length = 345 Score = 33.5 bits (75), Expect = 5.0 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Frame = -1 Query: 318 GLA*SPPPPGVLPLNGAAQLCTLQWEGGGPK-AAAPQRREKHKPPP----PSAYQPMPLL 154 G A +P P ++ AQ TL + G P A QR P P P P Sbjct: 251 GRAAAPAPAPMVRYCSGAQGSTLSFPPGVPTPTAVAQRPAPSGPAPRCSVPGCPHPRRYA 310 Query: 153 CAQKGNALCQLHC 115 C++ G ALC L C Sbjct: 311 CSRTGQALCSLQC 323
>Q6PGG2:GMIP_MOUSE GEM-interacting protein - Mus musculus (Mouse)| Length = 971 Score = 33.1 bits (74), Expect = 6.5 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 863 FGQHVVSFQTSAITNGPGAMPVCLDTSSGINGNLAMLNTTPSTIVSTASPN 1015 FG + + +T PG P CL++S +L +T P TI +SP+ Sbjct: 756 FGMDELPLASEPLTQDPGLAPACLESSPQHPASLLAQDTQPLTIALDSSPD 806
>Q9H074:PAIP1_HUMAN Polyadenylate-binding protein-interacting protein 1 - Homo sapiens| (Human) Length = 479 Score = 32.7 bits (73), Expect = 8.5 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Frame = -1 Query: 243 EGGG-PKAAAPQRREKHKPPPPSA---YQPMPL 157 EGGG P A P R +H+PP P A QP PL Sbjct: 27 EGGGFPNGAGPAERARHQPPQPKAPGFLQPPPL 59
>Q5NXZ7:GLGA_AZOSE Glycogen synthase - Azoarcus sp. (strain EbN1) (Aromatoleum| aromaticum (strain EbN1)) Length = 494 Score = 32.7 bits (73), Expect = 8.5 Identities = 24/70 (34%), Positives = 33/70 (47%) Frame = -1 Query: 1113 LWRPSLSICNSRYDHSTAIGPPYFRLWLESGIMLGEAVDTIVEGVVFNIARLPFIPLEVS 934 +WR + CN D TA+ P Y +L L G A IV V N+A PL+V+ Sbjct: 140 VWRADILHCN---DWPTALAPAYLKLGLP-----GAAPSLIV---VHNLAFQGIFPLDVA 188 Query: 933 RQTGMAPGPL 904 + G+ P L Sbjct: 189 ERLGLPPESL 198 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 483,169,649 Number of extensions: 10733146 Number of successful extensions: 28223 Number of sequences better than 10.0: 11 Number of HSP's gapped: 28055 Number of HSP's successfully gapped: 12 Length of query: 931 Length of database: 100,686,439 Length adjustment: 123 Effective length of query: 808 Effective length of database: 66,948,154 Effective search space: 54094108432 Effective search space used: 54094108432 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
