ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf84n17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ377064.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 2 mRNA, complete cds, alternatively spliced Length = 3284 Score = 432 bits (218), Expect = e-117 Identities = 407/470 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 550 aaaagggtaggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 ||||||||| || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 581 aaaagggtaagtacatgtggtaaattccagtgcaggtggacttattcctc 630 Score = 303 bits (153), Expect = 3e-78 Identities = 216/237 (91%) Strand = Plus / Plus Query: 2718 aggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagt 2777 |||||||||| || || |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 2054 aggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagt 2113 Query: 2778 atatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 2837 ||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2114 atatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggaca 2173 Query: 2838 ataagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccagga 2897 ||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2174 ataggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccagga 2233 Query: 2898 gattaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 |||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 2234 gattgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 2290 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 2449 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 2508 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 2509 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 2568 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 2569 cgtgatagagatagggacagggatcgtggtcgggat 2604 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2813 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 2872 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 2873 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 2924 Score = 107 bits (54), Expect = 3e-19 Identities = 112/128 (87%), Gaps = 5/128 (3%) Strand = Plus / Plus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 1931 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 1989 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 1990 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 2049 Query: 2545 tgcaaggt 2552 |||||||| Sbjct: 2050 tgcaaggt 2057 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 2628 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 2687 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 2688 tgaacgggaccgtggtca 2705 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 2356 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 2405 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 86 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 133
>gb|DQ377063.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 1 mRNA, complete cds, alternatively spliced Length = 3443 Score = 432 bits (218), Expect = e-117 Identities = 407/470 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 550 aaaagggtaggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 ||||||||| || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 581 aaaagggtaagtacatgtggtaaattccagtgcaggtggacttattcctc 630 Score = 305 bits (154), Expect = 7e-79 Identities = 217/238 (91%) Strand = Plus / Plus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2212 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 2271 Query: 2777 tatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagac 2836 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 2272 tatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggac 2331 Query: 2837 aataagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccagg 2896 |||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2332 aataggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccagg 2391 Query: 2897 agattaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 2392 agattgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 2449 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 1931 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 1989 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 1990 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 2049 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2050 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 2105 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 2608 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 2667 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 2668 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 2727 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 2728 cgtgatagagatagggacagggatcgtggtcgggat 2763 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2972 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 3031 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 3032 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 3083 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 2787 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 2846 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 2847 tgaacgggaccgtggtca 2864 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 2515 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 2564 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 86 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 133
>dbj|AK100686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113P16, full insert sequence Length = 3436 Score = 432 bits (218), Expect = e-117 Identities = 407/470 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 172 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 231 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 232 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 291 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 292 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 351 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 352 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 411 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 412 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 471 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 472 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 531 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 532 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 591 Query: 550 aaaagggtaggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 ||||||||| || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 592 aaaagggtaagtacatgtggtaaattccagtgcaggtggacttattcctc 641 Score = 305 bits (154), Expect = 7e-79 Identities = 217/238 (91%) Strand = Plus / Plus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2223 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 2282 Query: 2777 tatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagac 2836 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 2283 tatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggac 2342 Query: 2837 aataagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccagg 2896 |||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2343 aataggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccagg 2402 Query: 2897 agattaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 2403 agattgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 2460 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 1942 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 2000 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 2001 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 2060 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2061 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 2116 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 2619 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 2678 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 2679 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 2738 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 2739 cgtgatagagatagggacagggatcgtggtcgggat 2774 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2983 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 3042 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 3043 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 3094 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 2798 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 2857 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 2858 tgaacgggaccgtggtca 2875 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 2526 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 2575 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 97 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 144
>ref|NM_001070585.1| Oryza sativa (japonica cultivar-group) Os10g0115600 (Os10g0115600) mRNA, complete cds Length = 1796 Score = 391 bits (197), Expect = e-104 Identities = 371/429 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 160 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 219 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 220 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 279 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 280 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 339 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 340 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 399 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 400 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 459 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 460 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 519 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 520 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 579 Query: 550 aaaagggta 558 ||||||||| Sbjct: 580 aaaagggta 588 Score = 301 bits (152), Expect = 1e-77 Identities = 215/236 (91%) Strand = Plus / Plus Query: 2719 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 2778 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 585 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 644 Query: 2779 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaa 2838 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 645 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggacaa 704 Query: 2839 taagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggag 2898 || |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 705 taggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccaggag 764 Query: 2899 attaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 765 attgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 820 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 979 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 1038 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 1039 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 1098 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 1099 cgtgatagagatagggacagggatcgtggtcgggat 1134 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1343 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 1402 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 1403 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 1454 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 1158 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 1217 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 1218 tgaacgggaccgtggtca 1235 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 886 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 935 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 85 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 132
>gb|DQ377062.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K mRNA, complete cds, alternatively spliced Length = 1815 Score = 391 bits (197), Expect = e-104 Identities = 371/429 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 550 aaaagggta 558 ||||||||| Sbjct: 581 aaaagggta 589 Score = 301 bits (152), Expect = 1e-77 Identities = 215/236 (91%) Strand = Plus / Plus Query: 2719 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 2778 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 586 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 645 Query: 2779 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaa 2838 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 646 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggacaa 705 Query: 2839 taagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggag 2898 || |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 706 taggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccaggag 765 Query: 2899 attaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 766 attgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 821 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 980 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 1039 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 1040 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 1099 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 1100 cgtgatagagatagggacagggatcgtggtcgggat 1135 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1344 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 1403 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 1404 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 1455 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 1159 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 1218 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 1219 tgaacgggaccgtggtca 1236 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 887 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 936 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 86 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 133
>dbj|AK121007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046L24, full insert sequence Length = 1798 Score = 391 bits (197), Expect = e-104 Identities = 371/429 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 550 aaaagggta 558 ||||||||| Sbjct: 581 aaaagggta 589 Score = 301 bits (152), Expect = 1e-77 Identities = 215/236 (91%) Strand = Plus / Plus Query: 2719 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 2778 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 586 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 645 Query: 2779 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaa 2838 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 646 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggacaa 705 Query: 2839 taagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggag 2898 || |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 706 taggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccaggag 765 Query: 2899 attaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 766 attgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 821 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 980 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 1039 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 1040 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 1099 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 1100 cgtgatagagatagggacagggatcgtggtcgggat 1135 Score = 115 bits (58), Expect = 1e-21 Identities = 99/112 (88%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1344 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 1403 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || | |||||||||||||||||||||||| Sbjct: 1404 gccctgaagagggcgaggcatatgatggaggtgactaccagtatcaccaagc 1455 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 1159 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 1218 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 1219 tgaacgggaccgtggtca 1236 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 887 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 936 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 86 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 133
>dbj|AK059504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A09, full insert sequence Length = 1796 Score = 391 bits (197), Expect = e-104 Identities = 371/429 (86%) Strand = Plus / Plus Query: 130 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 189 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 160 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 219 Query: 190 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 249 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 220 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 279 Query: 250 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 309 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 280 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 339 Query: 310 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 369 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 340 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 399 Query: 370 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 429 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 400 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 459 Query: 430 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 489 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 460 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 519 Query: 490 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 549 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 520 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 579 Query: 550 aaaagggta 558 ||||||||| Sbjct: 580 aaaagggta 588 Score = 301 bits (152), Expect = 1e-77 Identities = 215/236 (91%) Strand = Plus / Plus Query: 2719 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 2778 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 585 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 644 Query: 2779 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaa 2838 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 645 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggacaa 704 Query: 2839 taagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggag 2898 || |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 705 taggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccaggag 764 Query: 2899 attaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||| || |||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 765 attgggtggtggacttggatcaagcagaattggtggtgaaaatgctgaacagaagc 820 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 979 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 1038 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 1039 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 1098 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 1099 cgtgatagagatagggacagggatcgtggtcgggat 1134 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1343 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 1402 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 1403 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 1454 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 1158 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 1217 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 1218 tgaacgggaccgtggtca 1235 Score = 60.0 bits (30), Expect = 7e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3020 cgtgtagatagggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 |||| ||||||||| || |||||||||||||||||| |||||||||||| Sbjct: 886 cgtgcagatagggaccgcgagaagtctcgtgaaaggccacgggaaagaga 935 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 85 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 132
>gb|DQ019633.1| Triticum aestivum U1 snRNP-interacting 70 kDa protein (U1-70K) mRNA, complete cds Length = 1729 Score = 313 bits (158), Expect = 3e-81 Identities = 350/414 (84%) Strand = Plus / Plus Query: 145 cagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctgctcaagctg 204 |||||||||||||| |||||| |||| || ||||| || ||| |||||||||| |||||| Sbjct: 117 cagctcaagctcatcgggcagagccatccgacggggctgacgacgaacctgctgaagctg 176 Query: 205 ttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcc 264 |||||| | ||||| |||||||||||||||||| || ||||||||||||||||||| Sbjct: 177 ttcgagccacggccaccgctcgagcacaagccgccgctcgagaagcgcaagttgccggct 236 Query: 265 tacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcg 324 ||| | || ||| |||||||||| ||| |||| || |||||||| ||||| |||||||| Sbjct: 237 tactctggaatgtcgcagtttgtatcgaggttcgcagagcctggtgaccccgagtatgct 296 Query: 325 ccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcaggaaacttaag 384 ||||||||||| || |||||||||| ||| |||||||||||||||||| | |||||||| Sbjct: 297 ccgcctgtccccacatgcgagactagggctgaaaagaaggatagaatccgtcaacttaag 356 Query: 385 cttgagcaaggtgcagataaggtggccaaagagcttcagaactataacccacaaagtgat 444 |||||| ||||||||| |||||| || ||||||| ||||| ||| ||||||||| ||| Sbjct: 357 cttgaggaaggtgcagctaaggttgctgaagagctccagaagtatgacccacaaaatgac 416 Query: 445 cccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaattacgagaca 504 |||||| |||| |||||| |||||||||||||| |||||| ||||| ||||||||| Sbjct: 417 cccaatgtcactggagatccatacaaaacactctttgttgcacgacttggctacgagaca 476 Query: 505 tctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 558 || ||| | |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 477 tccgagcagaaggttaaaagggactttgaagcttatgggcctattaaaagggta 530 Score = 222 bits (112), Expect = 8e-54 Identities = 205/236 (86%) Strand = Plus / Plus Query: 2719 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 2778 ||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 527 ggtacggctcgtaaccgacaaggtaacaaataaacctagaggatatgcattcgtagagta 586 Query: 2779 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaa 2838 | || |||||||| ||||||| |||||| ||||||||||||||||||||||| || || Sbjct: 587 tgcacacactcgggacatgaaaagtgcttataagcaagctgatgggagaaaagtggataa 646 Query: 2839 taagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggag 2898 || ||||| || ||||| || || ||||||||||||||||| ||||||||||| ||||| Sbjct: 647 caaaagggtgcttgttgacgtagagcgtggtagaactgttccaaattggcgtcctaggag 706 Query: 2899 attaggcggtggacttggatcaagcagaatttgtggtgcaagtgctgaccagaagc 2954 ||| || |||||||||||||||||||| ||| |||||| | ||||| |||||||| Sbjct: 707 attgggtggtggacttggatcaagcaggattggtggtgaagatgctgcccagaagc 762 Score = 87.7 bits (44), Expect = 3e-13 Identities = 89/104 (85%) Strand = Plus / Plus Query: 3086 cgtgagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggac 3145 ||||| |||||| |||||||||| || ||||||||||||||||| || || ||||| || Sbjct: 921 cgtgatcgtgatccaagggaagatagacaccaccatagagatcgtgagagaactcgtgat 980 Query: 3146 agggaccgaggaagggaccgggaaaaagaccatgggcgtgaccg 3189 ||||| |||| |||||||| ||| | ||||| |||||||||||| Sbjct: 981 agggatcgagaaagggaccaggagagagaccgtgggcgtgaccg 1024 Score = 75.8 bits (38), Expect = 1e-09 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2980 tgggcgccccagatcagaagaacctaagaggggtgattcccgtgtagatagggatcggga 3039 ||||||||||||||||||||| |||| ||||| |||| || |||| ||||||| || Sbjct: 791 tgggcgccccagatcagaagagcctaggagggatgatcgttctgcagatcgggatcgcga 850 Query: 3040 gaagtctcgtgaaagggtacgggaaagaga 3069 ||| |||||||| ||||||||||||||||| Sbjct: 851 gaaatctcgtgatagggtacgggaaagaga 880 Score = 44.1 bits (22), Expect = 4.0 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3287 agaggcagggatcgtgagagagatgatgggcgtgcaagttacgaac 3332 ||||||||||| ||||| |||||| | | |||||||||| |||||| Sbjct: 1104 agaggcagggaccgtgacagagattacgagcgtgcaagtcacgaac 1149
>emb|CT833582.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107D13, full insert sequence Length = 1859 Score = 293 bits (148), Expect = 3e-75 Identities = 202/220 (91%) Strand = Plus / Plus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 615 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 674 Query: 2777 tatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagac 2836 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 675 tatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggac 734 Query: 2837 aataagagggtactagttgatgtggaacgtggtagaactgttcctaattggcgtcccagg 2896 |||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 735 aataggagggtgctagttgatgtggagcgtggtagaactgttccaaattggcgtcccagg 794 Query: 2897 agattaggcggtggacttggatcaagcagaatttgtggtg 2936 ||||| || |||||||||||||||||||||||| |||||| Sbjct: 795 agattgggtggtggacttggatcaagcagaattggtggtg 834 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 334 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 392 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 393 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 452 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 453 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 508 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1397 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 1456 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || ||||||||||| || ||||||||||||||||||| |||||| Sbjct: 1457 gccctgaagagggtgaggcatatgatgaaggtgactaccagtatctccaagc 1508 Score = 77.8 bits (39), Expect = 3e-10 Identities = 107/129 (82%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 1191 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 1250 Query: 3328 cgaacgtgaccgcggtcatttgaaggatagggatgctgaata---caattgtgagccaaa 3384 ||||| ||||| ||||| || | || || ||||||||||| ||| |||||||||| Sbjct: 1251 tgaacgggaccgtggtcacgtgcatgagagagatgctgaatatgccaacggtgagccaaa 1310 Query: 3385 gcatgacag 3393 |||||||| Sbjct: 1311 acatgacag 1319 Score = 65.9 bits (33), Expect = 1e-06 Identities = 51/57 (89%) Strand = Plus / Plus Query: 3182 cgtgaccgtgaccgtgatcgtcgggacagagatagggatagggaccgtggtagggat 3238 ||||||||||| ||||||||||| || ||||||||||| ||||| |||||| ||||| Sbjct: 1111 cgtgaccgtgagcgtgatcgtcgtgatagagatagggacagggatcgtggtcgggat 1167 Score = 56.0 bits (28), Expect = 0.001 Identities = 66/76 (86%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 3115 ccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgggaaaaaga 3174 ||||||||| |||||||||||||||| || ||||||||||| ||||| |||||| | ||| Sbjct: 1034 ccaccatagggatcgggacaggactc-ggccagggaccgagaaaggg-ccgggagagaga 1091 Query: 3175 ccatgggcgtgaccgt 3190 ||||| |||| |||| Sbjct: 1092 tcatggtcgtgtccgt 1107
>gb|AY627768.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 3299 Score = 244 bits (123), Expect = 2e-60 Identities = 348/423 (82%) Strand = Plus / Plus Query: 136 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 195 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 196 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 255 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 256 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 315 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 316 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 375 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 376 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 435 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 436 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 495 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 496 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 555 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 556 gta 558 ||| Sbjct: 548 gta 550 Score = 147 bits (74), Expect = 4e-31 Identities = 175/206 (84%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 2706 tttgagctttccaggtacggctcgtaactgacaaggatacgaataaacctagaggatatg 2765 ||||| |||||||||| || || |||||||| || ||||| | ||||||||||||||||| Sbjct: 2186 tttgatctttccaggttcgtcttgtaactgagaaagataccagtaaacctagaggatatg 2245 Query: 2766 cattcatagagtatatgcatactcgggatatgaaaaatgctta-caagcaagctgatggg 2824 ||||||| |||||| |||| || || || ||||||||||| || | ||| ||| |||||| Sbjct: 2246 cattcattgagtatgtgcacacacgagacatgaaaaatgcctacccagc-agcagatggg 2304 Query: 2825 agaaaagtagacaataagagggtactagttgatgtggaacgtggtagaactgttcctaat 2884 |||||||| ||||| | ||||||| |||||||||| || || || ||||||||||| ||| Sbjct: 2305 agaaaagtggacaacaggagggtattagttgatgttgagcgaggcagaactgttccaaat 2364 Query: 2885 tggcgtcccaggagattaggcggtgg 2910 |||||||| |||||||| || ||||| Sbjct: 2365 tggcgtcctaggagattgggtggtgg 2390 Score = 97.6 bits (49), Expect = 3e-16 Identities = 159/196 (81%), Gaps = 6/196 (3%) Strand = Plus / Plus Query: 3107 gagaggcaccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgg 3166 |||| ||| ||||||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 2611 gagaagcatcaccatagagaccgtgagaggactcgggatagggagagaggaaaggaccgt 2670 Query: 3167 gaaaaagaccatgggcgtgaccgtgaccgtgatcgtcgggacagagatagggatagggac 3226 |||| |||||| || |||||||| || ||||||||||| ||| ||||| | ||| Sbjct: 2671 gaaagagaccacggccgtgaccgggagcgtgatcgtcgtgac------agggacaaggat 2724 Query: 3227 cgtggtagggatcacgatagggagaaggatcgtggtctctctcatgatcgtcaccgtgag 3286 |||||| |||| | ||||| || | ||| ||||||| |||||||||||| || |||||| Sbjct: 2725 cgtggtcgggactatgatagagaaagggaccgtggtcgctctcatgatcgccatcgtgag 2784 Query: 3287 agaggcagggatcgtg 3302 ||||||||||| |||| Sbjct: 2785 agaggcagggaccgtg 2800 Score = 87.7 bits (44), Expect = 3e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 3557 gaaggccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcacc 3608 |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 3097 gaaggccctgaggaaggtgaggcatatgaggaaggcgactaccagtatcacc 3148 Score = 71.9 bits (36), Expect = 2e-08 Identities = 75/88 (85%) Strand = Plus / Plus Query: 2984 cgccccagatcagaagaacctaagaggggtgattcccgtgtagatagggatcgggagaag 3043 ||||| ||||||||||| ||| ||||| |||| |||| ||||||||||| || || Sbjct: 2464 cgccctagatcagaagagcctcggagggatgatcgtcgtgccgatagggatcgtgaaaaa 2523 Query: 3044 tctcgtgaaagggtacgggaaagagacc 3071 |||||||||||||||||||||||||||| Sbjct: 2524 tctcgtgaaagggtacgggaaagagacc 2551 Score = 65.9 bits (33), Expect = 1e-06 Identities = 42/44 (95%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 2484 gcttttcctccaactgt--tgatctgtgctggatttcactcctc 2525 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2132 gcttttcctccaactgtgttgatctgtgctggatttcactcctc 2175 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2366 gagggcaacttggtatagtattta 2389 |||||||||||||||||||||||| Sbjct: 2017 gagggcaacttggtatagtattta 2040
>gb|AY627767.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 3463 Score = 244 bits (123), Expect = 2e-60 Identities = 348/423 (82%) Strand = Plus / Plus Query: 136 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 195 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 196 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 255 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 256 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 315 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 316 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 375 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 376 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 435 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 436 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 495 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 496 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 555 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 556 gta 558 ||| Sbjct: 548 gta 550 Score = 161 bits (81), Expect = 2e-35 Identities = 109/116 (93%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 2484 gcttttcctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctac 2541 ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| Sbjct: 2132 gcttttcctccaactgtgttgatctgtgctggatttcactcctcgtg-tggaagctctac 2190 Query: 2542 atatgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacata 2597 || |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2191 atgtgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcata 2246 Score = 149 bits (75), Expect = 9e-32 Identities = 182/215 (84%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 2697 attactatctttgagctttccaggtacggctcgtaactgacaaggatacgaataaaccta 2756 ||||||| ||||| |||||||||| || || |||||||| || ||||| | |||||||| Sbjct: 2341 attactaaatttgatctttccaggttcgtcttgtaactgagaaagataccagtaaaccta 2400 Query: 2757 gaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgctta-caagcaa 2815 |||||||||||||||| |||||| |||| || || || ||||||||||| || | ||| | Sbjct: 2401 gaggatatgcattcattgagtatgtgcacacacgagacatgaaaaatgcctacccagc-a 2459 Query: 2816 gctgatgggagaaaagtagacaataagagggtactagttgatgtggaacgtggtagaact 2875 || |||||||||||||| ||||| | ||||||| |||||||||| || || || |||||| Sbjct: 2460 gcagatgggagaaaagtggacaacaggagggtattagttgatgttgagcgaggcagaact 2519 Query: 2876 gttcctaattggcgtcccaggagattaggcggtgg 2910 ||||| ||||||||||| |||||||| || ||||| Sbjct: 2520 gttccaaattggcgtcctaggagattgggtggtgg 2554 Score = 97.6 bits (49), Expect = 3e-16 Identities = 159/196 (81%), Gaps = 6/196 (3%) Strand = Plus / Plus Query: 3107 gagaggcaccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgg 3166 |||| ||| ||||||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 2775 gagaagcatcaccatagagaccgtgagaggactcgggatagggagagaggaaaggaccgt 2834 Query: 3167 gaaaaagaccatgggcgtgaccgtgaccgtgatcgtcgggacagagatagggatagggac 3226 |||| |||||| || |||||||| || ||||||||||| ||| ||||| | ||| Sbjct: 2835 gaaagagaccacggccgtgaccgggagcgtgatcgtcgtgac------agggacaaggat 2888 Query: 3227 cgtggtagggatcacgatagggagaaggatcgtggtctctctcatgatcgtcaccgtgag 3286 |||||| |||| | ||||| || | ||| ||||||| |||||||||||| || |||||| Sbjct: 2889 cgtggtcgggactatgatagagaaagggaccgtggtcgctctcatgatcgccatcgtgag 2948 Query: 3287 agaggcagggatcgtg 3302 ||||||||||| |||| Sbjct: 2949 agaggcagggaccgtg 2964 Score = 87.7 bits (44), Expect = 3e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 3557 gaaggccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcacc 3608 |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 3261 gaaggccctgaggaaggtgaggcatatgaggaaggcgactaccagtatcacc 3312 Score = 71.9 bits (36), Expect = 2e-08 Identities = 75/88 (85%) Strand = Plus / Plus Query: 2984 cgccccagatcagaagaacctaagaggggtgattcccgtgtagatagggatcgggagaag 3043 ||||| ||||||||||| ||| ||||| |||| |||| ||||||||||| || || Sbjct: 2628 cgccctagatcagaagagcctcggagggatgatcgtcgtgccgatagggatcgtgaaaaa 2687 Query: 3044 tctcgtgaaagggtacgggaaagagacc 3071 |||||||||||||||||||||||||||| Sbjct: 2688 tctcgtgaaagggtacgggaaagagacc 2715 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2366 gagggcaacttggtatagtattta 2389 |||||||||||||||||||||||| Sbjct: 2017 gagggcaacttggtatagtattta 2040
>gb|AY627766.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 1647 Score = 242 bits (122), Expect = 8e-60 Identities = 347/422 (82%) Strand = Plus / Plus Query: 136 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 195 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 196 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 255 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 256 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 315 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 316 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 375 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 376 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 435 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 436 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 495 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 496 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 555 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 556 gt 557 || Sbjct: 548 gt 549 Score = 133 bits (67), Expect = 6e-27 Identities = 156/183 (85%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 2729 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 2788 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 557 gtaactgagaaagataccagtaaacctagaggatatgcattcattgagtatgtgcacaca 616 Query: 2789 cgggatatgaaaaatgcttaca-agcaagctgatgggagaaaagtagacaataagagggt 2847 || || ||||||||||| ||| |||| || |||||||||||||| ||||| | |||||| Sbjct: 617 cgagacatgaaaaatgcctacccagca-gcagatgggagaaaagtggacaacaggagggt 675 Query: 2848 actagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggagattaggcgg 2907 | |||||||||| || || || ||||||||||| ||||||||||| |||||||| || || Sbjct: 676 attagttgatgttgagcgaggcagaactgttccaaattggcgtcctaggagattgggtgg 735 Query: 2908 tgg 2910 ||| Sbjct: 736 tgg 738 Score = 97.6 bits (49), Expect = 3e-16 Identities = 159/196 (81%), Gaps = 6/196 (3%) Strand = Plus / Plus Query: 3107 gagaggcaccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgg 3166 |||| ||| ||||||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 959 gagaagcatcaccatagagaccgtgagaggactcgggatagggagagaggaaaggaccgt 1018 Query: 3167 gaaaaagaccatgggcgtgaccgtgaccgtgatcgtcgggacagagatagggatagggac 3226 |||| |||||| || |||||||| || ||||||||||| ||| ||||| | ||| Sbjct: 1019 gaaagagaccacggccgtgaccgggagcgtgatcgtcgtgac------agggacaaggat 1072 Query: 3227 cgtggtagggatcacgatagggagaaggatcgtggtctctctcatgatcgtcaccgtgag 3286 |||||| |||| | ||||| || | ||| ||||||| |||||||||||| || |||||| Sbjct: 1073 cgtggtcgggactatgatagagaaagggaccgtggtcgctctcatgatcgccatcgtgag 1132 Query: 3287 agaggcagggatcgtg 3302 ||||||||||| |||| Sbjct: 1133 agaggcagggaccgtg 1148 Score = 87.7 bits (44), Expect = 3e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 3557 gaaggccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcacc 3608 |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1445 gaaggccctgaggaaggtgaggcatatgaggaaggcgactaccagtatcacc 1496 Score = 71.9 bits (36), Expect = 2e-08 Identities = 75/88 (85%) Strand = Plus / Plus Query: 2984 cgccccagatcagaagaacctaagaggggtgattcccgtgtagatagggatcgggagaag 3043 ||||| ||||||||||| ||| ||||| |||| |||| ||||||||||| || || Sbjct: 812 cgccctagatcagaagagcctcggagggatgatcgtcgtgccgatagggatcgtgaaaaa 871 Query: 3044 tctcgtgaaagggtacgggaaagagacc 3071 |||||||||||||||||||||||||||| Sbjct: 872 tctcgtgaaagggtacgggaaagagacc 899
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 208 bits (105), Expect = 1e-49 Identities = 141/153 (92%) Strand = Plus / Plus Query: 2802 atgcttacaagcaagctgatgggagaaaagtagacaataagagggtactagttgatgtgg 2861 |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 14191 atgcttacaagcaagcagatgggagaaaagtggacaataggagggtgctagttgatgtgg 14250 Query: 2862 aacgtggtagaactgttcctaattggcgtcccaggagattaggcggtggacttggatcaa 2921 | ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 14251 agcgtggtagaactgttccaaattggcgtcccaggagattgggtggtggacttggatcaa 14310 Query: 2922 gcagaatttgtggtgcaagtgctgaccagaagc 2954 |||||||| |||||| || |||||| ||||||| Sbjct: 14311 gcagaattggtggtgaaaatgctgaacagaagc 14343 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 13722 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 13780 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 13781 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 13840 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13841 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 13896 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Plus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 14965 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 15024 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgac------cgtgatcgt 3202 || ||||||||||||||||| | ||| ||||| |||||||||||| ||||||||| Sbjct: 15025 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 15084 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 15085 cgtgatagagatagggacagggatcgtggtcgggat 15120 Score = 135 bits (68), Expect = 1e-27 Identities = 137/158 (86%), Gaps = 4/158 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 15329 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 15388 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagcagcagaag 3620 ||||||| || || |||||||| || |||||||||||||||||||||||||| || || | Sbjct: 15389 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagctgctgatg 15448 Query: 3621 agca-aaagactgaagcttgattactgcagtaagtttt 3657 |||| || |||||| |||||| |||||||||||||| Sbjct: 15449 agcacaataactgaaatttgattgctgcagtaagtttt 15486 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Plus Query: 499 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 558 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 12321 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 12380 Query: 559 ggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 12381 agtacatgtggtaaattccagtgcaggtggacttattcctc 12421 Score = 105 bits (53), Expect = 1e-18 Identities = 98/113 (86%) Strand = Plus / Plus Query: 157 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 216 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 10926 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 10985 Query: 217 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 269 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 10986 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 11038 Score = 97.6 bits (49), Expect = 3e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 14003 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 14062 Query: 2777 tatatgcatactcgggatatgaaaa 2801 |||||||| || ||||| ||||||| Sbjct: 14063 tatatgcacacccgggacatgaaaa 14087 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Plus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 15144 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 15203 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 15204 tgaacgggaccgtggtca 15221 Score = 67.9 bits (34), Expect = 3e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 271 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 330 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 11200 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 11259 Query: 331 gtcccaacgtgcgagactaagg 352 ||||| || |||||||| |||| Sbjct: 11260 gtccccacatgcgagaccaagg 11281 Score = 67.9 bits (34), Expect = 3e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 431 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 490 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 12154 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 12213 Query: 491 tt 492 || Sbjct: 12214 tt 12215 Score = 63.9 bits (32), Expect = 4e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 350 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 409 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 11992 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 12051 Query: 410 ccaaagagcttcagaa 425 | ||||||||||||| Sbjct: 12052 ctgaagagcttcagaa 12067 Score = 50.1 bits (25), Expect = 0.064 Identities = 37/41 (90%) Strand = Plus / Plus Query: 3029 agggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 ||||| || |||||||||||||||||| |||||||||||| Sbjct: 14881 agggaccgcgagaagtctcgtgaaaggccacgggaaagaga 14921 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 10724 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 10771
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 208 bits (105), Expect = 1e-49 Identities = 141/153 (92%) Strand = Plus / Minus Query: 2802 atgcttacaagcaagctgatgggagaaaagtagacaataagagggtactagttgatgtgg 2861 |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 988363 atgcttacaagcaagcagatgggagaaaagtggacaataggagggtgctagttgatgtgg 988304 Query: 2862 aacgtggtagaactgttcctaattggcgtcccaggagattaggcggtggacttggatcaa 2921 | ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 988303 agcgtggtagaactgttccaaattggcgtcccaggagattgggtggtggacttggatcaa 988244 Query: 2922 gcagaatttgtggtgcaagtgctgaccagaagc 2954 |||||||| |||||| || |||||| ||||||| Sbjct: 988243 gcagaattggtggtgaaaatgctgaacagaagc 988211 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 988832 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 988774 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 988773 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 988714 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 988713 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 988658 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 987589 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 987530 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgacc------gtgatcgt 3202 || ||||||||||||||||| | ||| ||||| ||||||||||||| |||||||| Sbjct: 987529 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 987470 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 987469 cgtgatagagatagggacagggatcgtggtcgggat 987434 Score = 135 bits (68), Expect = 1e-27 Identities = 137/158 (86%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 987225 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 987166 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagcagcagaag 3620 ||||||| || || |||||||| || |||||||||||||||||||||||||| || || | Sbjct: 987165 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagctgctgatg 987106 Query: 3621 agca-aaagactgaagcttgattactgcagtaagtttt 3657 |||| || |||||| |||||| |||||||||||||| Sbjct: 987105 agcacaataactgaaatttgattgctgcagtaagtttt 987068 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 499 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 558 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 990233 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 990174 Query: 559 ggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 990173 agtacatgtggtaaattccagtgcaggtggacttattcctc 990133 Score = 105 bits (53), Expect = 1e-18 Identities = 98/113 (86%) Strand = Plus / Minus Query: 157 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 216 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 991628 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 991569 Query: 217 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 269 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 991568 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 991516 Score = 97.6 bits (49), Expect = 3e-16 Identities = 76/85 (89%) Strand = Plus / Minus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 988551 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 988492 Query: 2777 tatatgcatactcgggatatgaaaa 2801 |||||||| || ||||| ||||||| Sbjct: 988491 tatatgcacacccgggacatgaaaa 988467 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Minus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 987410 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 987351 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 987350 tgaacgggaccgtggtca 987333 Score = 67.9 bits (34), Expect = 3e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 431 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 490 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 990400 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 990341 Query: 491 tt 492 || Sbjct: 990340 tt 990339 Score = 67.9 bits (34), Expect = 3e-07 Identities = 70/82 (85%) Strand = Plus / Minus Query: 271 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 330 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 991354 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 991295 Query: 331 gtcccaacgtgcgagactaagg 352 ||||| || |||||||| |||| Sbjct: 991294 gtccccacatgcgagaccaagg 991273 Score = 63.9 bits (32), Expect = 4e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 350 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 409 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 990562 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 990503 Query: 410 ccaaagagcttcagaa 425 | ||||||||||||| Sbjct: 990502 ctgaagagcttcagaa 990487 Score = 50.1 bits (25), Expect = 0.064 Identities = 37/41 (90%) Strand = Plus / Minus Query: 3029 agggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 ||||| || |||||||||||||||||| |||||||||||| Sbjct: 987673 agggaccgcgagaagtctcgtgaaaggccacgggaaagaga 987633 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Minus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 991830 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 991783 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 131448 cattgtgaaatggagggagtat 131469
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 208 bits (105), Expect = 1e-49 Identities = 141/153 (92%) Strand = Plus / Minus Query: 2802 atgcttacaagcaagctgatgggagaaaagtagacaataagagggtactagttgatgtgg 2861 |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 988363 atgcttacaagcaagcagatgggagaaaagtggacaataggagggtgctagttgatgtgg 988304 Query: 2862 aacgtggtagaactgttcctaattggcgtcccaggagattaggcggtggacttggatcaa 2921 | ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 988303 agcgtggtagaactgttccaaattggcgtcccaggagattgggtggtggacttggatcaa 988244 Query: 2922 gcagaatttgtggtgcaagtgctgaccagaagc 2954 |||||||| |||||| || |||||| ||||||| Sbjct: 988243 gcagaattggtggtgaaaatgctgaacagaagc 988211 Score = 194 bits (98), Expect = 2e-45 Identities = 159/176 (90%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 2429 ttccctggtaaggggatatcatcatattttccgacatacgccaatcagtcagactgcttt 2488 ||||||||||||||| ||||| ||||| || ||| ||||||||||| ||||||||||| Sbjct: 988832 ttccctggtaagggggtatcactgtatttccc-acaaacgccaatcagccagactgcttt 988774 Query: 2489 t--cctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctacata 2544 | ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 988773 ttgcctccaactgtgttgatctgtgctggatttcactcctcgtaatgaaggatctacata 988714 Query: 2545 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacatagaa 2600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 988713 tgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcatagaa 988658 Score = 145 bits (73), Expect = 1e-30 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 3089 gagcgtgattcaagggaagagaggcaccaccatagagatcgggacaggactcgggacagg 3148 ||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 987589 gagcgtgattcaaaagaagatagacaccaccatagggatcgggacaggactcgggacagg 987530 Query: 3149 gaccgaggaagggaccgggaaaaagaccatgggcgtgaccgtgacc------gtgatcgt 3202 || ||||||||||||||||| | ||| ||||| ||||||||||||| |||||||| Sbjct: 987529 gaacgaggaagggaccgggagagagatcatggtcgtgaccgtgaccgtgagcgtgatcgt 987470 Query: 3203 cgggacagagatagggatagggaccgtggtagggat 3238 || || ||||||||||| ||||| |||||| ||||| Sbjct: 987469 cgtgatagagatagggacagggatcgtggtcgggat 987434 Score = 135 bits (68), Expect = 1e-27 Identities = 137/158 (86%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 987225 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 987166 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagcagcagaag 3620 ||||||| || || |||||||| || |||||||||||||||||||||||||| || || | Sbjct: 987165 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagctgctgatg 987106 Query: 3621 agca-aaagactgaagcttgattactgcagtaagtttt 3657 |||| || |||||| |||||| |||||||||||||| Sbjct: 987105 agcacaataactgaaatttgattgctgcagtaagtttt 987068 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 499 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 558 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 990233 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 990174 Query: 559 ggtgcatgtggtaaatcccagtacaggtggagttattcctc 599 || |||||||||||| ||||| |||||||| ||||||||| Sbjct: 990173 agtacatgtggtaaattccagtgcaggtggacttattcctc 990133 Score = 105 bits (53), Expect = 1e-18 Identities = 98/113 (86%) Strand = Plus / Minus Query: 157 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 216 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 991628 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 991569 Query: 217 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 269 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 991568 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 991516 Score = 97.6 bits (49), Expect = 3e-16 Identities = 76/85 (89%) Strand = Plus / Minus Query: 2717 caggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagag 2776 ||||||||||| || || |||||||| || |||||||||||||||||||||||||| ||| Sbjct: 988551 caggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgag 988492 Query: 2777 tatatgcatactcgggatatgaaaa 2801 |||||||| || ||||| ||||||| Sbjct: 988491 tatatgcacacccgggacatgaaaa 988467 Score = 75.8 bits (38), Expect = 1e-09 Identities = 68/78 (87%) Strand = Plus / Minus Query: 3268 tcatgatcgtcaccgtgagagaggcagggatcgtgagagagatgatgggcgtgcaagtta 3327 ||||||||| || ||||||||||||||||| |||||||||||| | | |||||||||| | Sbjct: 987410 tcatgatcgccatcgtgagagaggcagggaccgtgagagagattacgagcgtgcaagtca 987351 Query: 3328 cgaacgtgaccgcggtca 3345 ||||| ||||| ||||| Sbjct: 987350 tgaacgggaccgtggtca 987333 Score = 67.9 bits (34), Expect = 3e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 431 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 490 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 990400 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 990341 Query: 491 tt 492 || Sbjct: 990340 tt 990339 Score = 67.9 bits (34), Expect = 3e-07 Identities = 70/82 (85%) Strand = Plus / Minus Query: 271 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 330 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 991354 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 991295 Query: 331 gtcccaacgtgcgagactaagg 352 ||||| || |||||||| |||| Sbjct: 991294 gtccccacatgcgagaccaagg 991273 Score = 63.9 bits (32), Expect = 4e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 350 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 409 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 990562 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 990503 Query: 410 ccaaagagcttcagaa 425 | ||||||||||||| Sbjct: 990502 ctgaagagcttcagaa 990487 Score = 50.1 bits (25), Expect = 0.064 Identities = 37/41 (90%) Strand = Plus / Minus Query: 3029 agggatcgggagaagtctcgtgaaagggtacgggaaagaga 3069 ||||| || |||||||||||||||||| |||||||||||| Sbjct: 987673 agggaccgcgagaagtctcgtgaaaggccacgggaaagaga 987633 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Minus Query: 55 atgggcgaccacggcaacgcgatgacgaggggcaacccggacggcggc 102 ||||||||| |||||| || ||||| | |||| ||||||||||||||| Sbjct: 991830 atgggcgactacggcagcgggatgatgcgggggaacccggacggcggc 991783 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 131448 cattgtgaaatggagggagtat 131469 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 19506376 cattgtgaaatggagggagtat 19506355
>gb|AY108570.1| Zea mays PCO063456 mRNA sequence Length = 1603 Score = 176 bits (89), Expect = 4e-40 Identities = 170/197 (86%) Strand = Plus / Plus Query: 2729 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 2788 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 275 gtaactgagaaagatacaagtaaacctagaggatatgcattcattgagtatgtgcacaca 334 Query: 2789 cgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagacaataagagggta 2848 || || ||||||||||| ||||||||||| |||||||||||||| ||||| | ||||||| Sbjct: 335 cgagacatgaaaaatgcctacaagcaagcagatgggagaaaagtggacaacaggagggta 394 Query: 2849 ctagttgatgtggaacgtggtagaactgttcctaattggcgtcccaggagattaggcggt 2908 |||||||||| || || || ||||||||||| ||||||||||| |||||||| || ||| Sbjct: 395 ttagttgatgttgagcgaggcagaactgttccaaattggcgtcctaggagattgggtggt 454 Query: 2909 ggacttggatcaagcag 2925 || | ||||||||||| Sbjct: 455 gggttgggatcaagcag 471 Score = 97.6 bits (49), Expect = 3e-16 Identities = 159/196 (81%), Gaps = 6/196 (3%) Strand = Plus / Plus Query: 3107 gagaggcaccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgg 3166 |||| ||| ||||||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 677 gagaagcatcaccatagagaccgtgagaggactcgggatagggagagaggaaaggaccgt 736 Query: 3167 gaaaaagaccatgggcgtgaccgtgaccgtgatcgtcgggacagagatagggatagggac 3226 |||| |||||| || |||||||| || ||||||||||| ||| ||||| | ||| Sbjct: 737 gaaagagaccacggccgtgaccgggagcgtgatcgtcgtgac------agggacaaggat 790 Query: 3227 cgtggtagggatcacgatagggagaaggatcgtggtctctctcatgatcgtcaccgtgag 3286 |||||| |||| | ||||| || | ||| ||||||| |||||||||||| || |||||| Sbjct: 791 cgtggtcgggactatgatagagaaagggaccgtggtcgctctcatgatcgccatcgtgag 850 Query: 3287 agaggcagggatcgtg 3302 ||||||||||| |||| Sbjct: 851 agaggcagggaccgtg 866 Score = 87.7 bits (44), Expect = 3e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 3557 gaaggccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcacc 3608 |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1163 gaaggccctgaggaaggtgaggcatatgaggaaggcgactaccagtatcacc 1214 Score = 81.8 bits (41), Expect = 2e-11 Identities = 66/72 (91%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 2484 gcttttcctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctac 2541 ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| Sbjct: 198 gcttttcctccaactgtgttgatctgtgctggatttcactcctcgt-gtggaagctctac 256 Query: 2542 atatgcaaggtt 2553 || ||||||||| Sbjct: 257 atgtgcaaggtt 268 Score = 71.9 bits (36), Expect = 2e-08 Identities = 75/88 (85%) Strand = Plus / Plus Query: 2984 cgccccagatcagaagaacctaagaggggtgattcccgtgtagatagggatcgggagaag 3043 ||||| ||||||||||| ||| ||||| |||| |||| ||||||||||| || || Sbjct: 530 cgccctagatcagaagagcctcggagggatgatcgtcgtgccgatagggatcgtgaaaaa 589 Query: 3044 tctcgtgaaagggtacgggaaagagacc 3071 |||||||||||||||||||||||||||| Sbjct: 590 tctcgtgaaagggtacgggaaagagacc 617 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2366 gagggcaacttggtatagtattta 2389 |||||||||||||||||||||||| Sbjct: 83 gagggcaacttggtatagtattta 106
>gb|AY627765.1| Zea mays U1 snRNP gene, complete cds; alternatively spliced Length = 5550 Score = 161 bits (81), Expect = 2e-35 Identities = 109/116 (93%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 2484 gcttttcctccaactgt--tgatctgtgctggatttcactcctcataatggaagctctac 2541 ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| Sbjct: 3088 gcttttcctccaactgtgttgatctgtgctggatttcactcctcgtg-tggaagctctac 3146 Query: 2542 atatgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcaacata 2597 || |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3147 atgtgcaaggttagcacggctgttttaggctttatgcctgtctgtcgtgcagcata 3202 Score = 97.6 bits (49), Expect = 3e-16 Identities = 159/196 (81%), Gaps = 6/196 (3%) Strand = Plus / Plus Query: 3107 gagaggcaccaccatagagatcgggacaggactcgggacagggaccgaggaagggaccgg 3166 |||| ||| ||||||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 4214 gagaagcatcaccatagagaccgtgagaggactcgggatagggagagaggaaaggaccgt 4273 Query: 3167 gaaaaagaccatgggcgtgaccgtgaccgtgatcgtcgggacagagatagggatagggac 3226 |||| |||||| || |||||||| || ||||||||||| ||| ||||| | ||| Sbjct: 4274 gaaagagaccacggccgtgaccgggagcgtgatcgtcgtgac------agggacaaggat 4327 Query: 3227 cgtggtagggatcacgatagggagaaggatcgtggtctctctcatgatcgtcaccgtgag 3286 |||||| |||| | ||||| || | ||| ||||||| |||||||||||| || |||||| Sbjct: 4328 cgtggtcgggactatgatagagaaagggaccgtggtcgctctcatgatcgccatcgtgag 4387 Query: 3287 agaggcagggatcgtg 3302 ||||||||||| |||| Sbjct: 4388 agaggcagggaccgtg 4403 Score = 87.7 bits (44), Expect = 3e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 2819 gatgggagaaaagtagacaataagagggtactagttgatgtggaacgtggtagaactgtt 2878 |||||||||||||| ||||| | ||||||| |||||||||| || || || ||||||||| Sbjct: 3510 gatgggagaaaagtggacaacaggagggtattagttgatgttgagcgaggcagaactgtt 3569 Query: 2879 cctaattggcgtcccaggagattaggcggtgg 2910 || ||||||||||| |||||||| || ||||| Sbjct: 3570 ccaaattggcgtcctaggagattgggtggtgg 3601 Score = 87.7 bits (44), Expect = 3e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 3557 gaaggccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcacc 3608 |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 4700 gaaggccctgaggaaggtgaggcatatgaggaaggcgactaccagtatcacc 4751 Score = 81.8 bits (41), Expect = 2e-11 Identities = 89/105 (84%) Strand = Plus / Plus Query: 2697 attactatctttgagctttccaggtacggctcgtaactgacaaggatacgaataaaccta 2756 ||||||| ||||| |||||||||| || || |||||||| || ||||| | |||||||| Sbjct: 3297 attactaaatttgatctttccaggttcgtcttgtaactgagaaagataccagtaaaccta 3356 Query: 2757 gaggatatgcattcatagagtatatgcatactcgggatatgaaaa 2801 |||||||||||||||| |||||| |||| || || || ||||||| Sbjct: 3357 gaggatatgcattcattgagtatgtgcacacacgagacatgaaaa 3401 Score = 65.9 bits (33), Expect = 1e-06 Identities = 93/113 (82%) Strand = Plus / Plus Query: 157 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 216 ||||||||| |||||| ||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 275 atggggcagatccacccgacggggctcacgcccaacctgcttaagctcttcgaaccgcgt 334 Query: 217 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 269 || ||||||| ||||||| || | |||||||||| |||||||||||||| Sbjct: 335 ccaccgctcgagtacaagcccccgctggagaagcgcaaattgccggcctacac 387 Score = 61.9 bits (31), Expect = 2e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 3029 agggatcgggagaagtctcgtgaaagggtacgggaaagagacc 3071 |||||||| || || |||||||||||||||||||||||||||| Sbjct: 4112 agggatcgtgaaaaatctcgtgaaagggtacgggaaagagacc 4154 Score = 60.0 bits (30), Expect = 7e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 431 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 490 ||||||||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||| Sbjct: 1260 acccacaaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagac 1319 Query: 491 tt 492 || Sbjct: 1320 tt 1321 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2366 gagggcaacttggtatagtattta 2389 |||||||||||||||||||||||| Sbjct: 2973 gagggcaacttggtatagtattta 2996
>emb|CT828465.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN040N06, full insert sequence Length = 618 Score = 123 bits (62), Expect = 5e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 3504 gctcaaagagacatgagcatgagtactatcaggcacaacc---caacacagaacctgaag 3560 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 165 gctcaaagcgacatgagcatgagtactatcagatgcaacctaacaacacagaacctgaag 224 Query: 3561 gccctgaggaaggtgaggcatacgaggaaggtgactaccagtatcaccaagc 3612 ||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 225 gccctgaagagggcgaggcatatgatgaaggtgactaccagtatcaccaagc 276
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 56.0 bits (28), Expect = 0.001 Identities = 49/56 (87%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||||||||| ||||||||||| |||| | |||||||||||||| ||||||| Sbjct: 1470 tccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 1415
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 56.0 bits (28), Expect = 0.001 Identities = 49/56 (87%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||| ||||| |||||||||||| |||| || |||||| ||||||| ||||||| Sbjct: 21656 tccctctgtaaataaatataagagcgtttagatcactaaagtagtgatctaaacgc 21711 Score = 48.1 bits (24), Expect = 0.25 Identities = 48/56 (85%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||| |||||||||||||||||| |||| || |||| ||||||| ||||||| Sbjct: 21734 tccctctgtaaagaaatataagagcgtttagatcactactttagtgatctaaacgc 21679
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 56.0 bits (28), Expect = 0.001 Identities = 49/56 (87%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||| ||||| |||||||||||||||| || ||||||||||| || ||||||| Sbjct: 2792 tccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgc 2737
>ref|NM_180345.1| Arabidopsis thaliana U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding (U1-70K) mRNA, complete cds Length = 2424 Score = 54.0 bits (27), Expect = 0.004 Identities = 84/103 (81%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 486 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 545 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggtaggt 561 ||| ||||||||||| | ||||| || |||||| |||||||| Sbjct: 546 taaaagggagtttgaatcttatggaccaattaaacgggtaggt 588 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 1519 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 1578 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 1579 tataagcaagctgatgg 1595
>gb|U52910.1|ATU52910 Arabidopsis thaliana U1 snRNP 70K truncated protein mRNA, long alternatively spliced transcript, complete cds Length = 2425 Score = 54.0 bits (27), Expect = 0.004 Identities = 84/103 (81%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 486 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 545 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggtaggt 561 ||| ||||||||||| | ||||| || |||||| |||||||| Sbjct: 546 taaaagggagtttgaatcttatggaccaattaaacgggtaggt 588 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 1520 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 1579 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 1580 tataagcaagctgatgg 1596
>gb|DQ995513.1| Hordeum vulgare clone 604d05_c-69 genomic sequence Length = 20922 Score = 52.0 bits (26), Expect = 0.016 Identities = 47/54 (87%) Strand = Plus / Minus Query: 960 cctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||| |||||||||||||||||| |||| || ||| || ||||||| ||||||| Sbjct: 14591 cctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgc 14538 Score = 52.0 bits (26), Expect = 0.016 Identities = 38/42 (90%) Strand = Plus / Minus Query: 972 aatataagagcatttatataactaaaatagtgatataaacgc 1013 ||||||||||| |||| || |||||| ||||||||||||||| Sbjct: 16014 aatataagagcgtttagatcactaaagtagtgatataaacgc 15973 Score = 48.1 bits (24), Expect = 0.25 Identities = 48/56 (85%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||||||||| ||||||||||| ||||||| |||| ||||||| ||||||| Sbjct: 15950 tccctccgtaaactaatataagagcgtttatatcactactttagtgatctaaacgc 16005
>gb|EF028774.1| Triticum aestivum CBF4B-D20 mRNA, complete cds Length = 980 Score = 52.0 bits (26), Expect = 0.016 Identities = 47/54 (87%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaac 1011 |||||| ||||| |||||||||||||||| || | |||||||||||| ||||| Sbjct: 756 tccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaac 809
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 52.0 bits (26), Expect = 0.016 Identities = 47/54 (87%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaac 1011 |||||||||||| ||||||||||| |||| || |||||| ||||||| ||||| Sbjct: 6398 tccctccgtaaactaatataagagcgtttagatcactaaagtagtgatctaaac 6345
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 52.0 bits (26), Expect = 0.016 Identities = 47/54 (87%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaac 1011 |||||| ||||| |||||||||||||||| || | |||||||||||| ||||| Sbjct: 741 tccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaac 794
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 52.0 bits (26), Expect = 0.016 Identities = 47/54 (87%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaac 1011 |||||| ||||| |||||||||||||||| || | |||||||||||| ||||| Sbjct: 698 tccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaac 751
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 73578 tccctccgtaaagaaatataagagcgttta 73607
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 52.0 bits (26), Expect = 0.016 Identities = 35/38 (92%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataacta 995 |||||| |||||||||||||||| |||||| ||||||| Sbjct: 2262 tccctctgtaaagaaatataagatcatttagataacta 2299
>gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1080 Score = 52.0 bits (26), Expect = 0.016 Identities = 35/38 (92%) Strand = Plus / Minus Query: 959 ccctccgtaaagaaatataagagcatttatataactaa 996 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 882 ccctctgtaaagaaatataagagcgtttatatcactaa 845
>gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1) gene, complete cds Length = 4971 Score = 52.0 bits (26), Expect = 0.016 Identities = 44/50 (88%) Strand = Plus / Minus Query: 956 tatccctccgtaaagaaatataagagcatttatataactaaaatagtgat 1005 ||||||| ||||| |||||||| |||||||| || |||||||||||||| Sbjct: 3034 tatccctttgtaaacaaatataatagcatttagatcactaaaatagtgat 2985
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 4950 tccctccgtaaagaaatataagagcgttta 4979
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 4719 tccctccgtaaagaaatataagagcgttta 4748
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 7028 tccctccgtaaagaaatataagagcgttta 7057
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 6506 tccctccgtaaagaaatataagagcgttta 6535
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 52.0 bits (26), Expect = 0.016 Identities = 29/30 (96%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 ||||||||||||||||||||||||| |||| Sbjct: 7045 tccctccgtaaagaaatataagagcgttta 7074
>gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20, complete sequence Length = 206063 Score = 50.1 bits (25), Expect = 0.064 Identities = 40/45 (88%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagt 1002 |||||| |||||||||||||||| | |||| || ||||||||||| Sbjct: 26733 tccctctgtaaagaaatataagatcgtttagatcactaaaatagt 26777
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 50.1 bits (25), Expect = 0.064 Identities = 46/53 (86%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaa 1010 |||||||||||||||||||| |||| |||| || || ||| ||||||| |||| Sbjct: 116871 tccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaa 116923
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 50.1 bits (25), Expect = 0.064 Identities = 46/53 (86%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaa 1010 |||||||||||||||||||| |||| |||| || || ||| ||||||| |||| Sbjct: 24693 tccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaa 24745
>ref|NM_114927.2| Arabidopsis thaliana U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding (U1-70K) mRNA, complete cds Length = 1555 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 621 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 680 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 681 tataagcaagctgatgg 697 Score = 46.1 bits (23), Expect = 1.0 Identities = 80/99 (80%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 497 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 556 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggt 557 ||| ||||||||||| | ||||| || |||||| |||| Sbjct: 557 taaaagggagtttgaatcttatggaccaattaaacgggt 595
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 50.1 bits (25), Expect = 0.064 Identities = 40/45 (88%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagt 1002 |||||| |||||||||||||||| | |||| || ||||||||||| Sbjct: 8832 tccctctgtaaagaaatataagatcgtttagatcactaaaatagt 8876 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgat 1005 |||||| ||||| ||||||||||| |||| || |||||||||||||| Sbjct: 747 tccctcagtaaactaatataagagcgtttagatcactaaaatagtgat 794
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 50.1 bits (25), Expect = 0.064 Identities = 46/53 (86%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaa 1010 |||||||||||||||||||| |||| |||| || || ||| ||||||| |||| Sbjct: 11675 tccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaa 11727
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 50.1 bits (25), Expect = 0.064 Identities = 46/53 (86%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaa 1010 |||||||||||||||||||| |||| |||| || || ||| ||||||| |||| Sbjct: 14393 tccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaaa 14445
>gb|AY094003.1| Arabidopsis thaliana AT3g50670/T3A5_50 mRNA, complete cds Length = 1284 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 526 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 585 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 586 tataagcaagctgatgg 602 Score = 46.1 bits (23), Expect = 1.0 Identities = 80/99 (80%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 402 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 461 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggt 557 ||| ||||||||||| | ||||| || |||||| |||| Sbjct: 462 taaaagggagtttgaatcttatggaccaattaaacgggt 500
>gb|AY039874.1| Arabidopsis thaliana AT3g50670/T3A5_50 mRNA, complete cds Length = 1483 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 583 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 642 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 643 tataagcaagctgatgg 659 Score = 46.1 bits (23), Expect = 1.0 Identities = 80/99 (80%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 459 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 518 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggt 557 ||| ||||||||||| | ||||| || |||||| |||| Sbjct: 519 taaaagggagtttgaatcttatggaccaattaaacgggt 557
>emb|BX823870.1|CNS0A6KL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 553 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 612 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 613 tataagcaagctgatgg 629
>gb|M93439.1|ATHRNU1 Arabidopsis thaliana 70kDa small nuclear ribonucleoprotein U1 (RNU1) mRNA, partial cds Length = 1465 Score = 50.1 bits (25), Expect = 0.064 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2747 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 2806 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 549 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 608 Query: 2807 tacaagcaagctgatgg 2823 || |||||||||||||| Sbjct: 609 tataagcaagctgatgg 625 Score = 46.1 bits (23), Expect = 1.0 Identities = 80/99 (80%) Strand = Plus / Plus Query: 459 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 518 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 425 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 484 Query: 519 taagcgggagtttgaagcctatgggcctattaaaagggt 557 ||| ||||||||||| | ||||| || |||||| |||| Sbjct: 485 taaaagggagtttgaatcttatggaccaattaaacgggt 523
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 48.1 bits (24), Expect = 0.25 Identities = 27/28 (96%) Strand = Plus / Plus Query: 960 cctccgtaaagaaatataagagcattta 987 |||| ||||||||||||||||||||||| Sbjct: 117311 cctctgtaaagaaatataagagcattta 117338
>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence Length = 134939 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2842 gagggtactagttgatgtggaacgtggtagaactgttcctaattggcg 2889 |||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct: 40161 gagggtgcttgtggatgttgaacgtgggagaactgttccaaattggcg 40208
>gb|AY137516.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 2 (hir2) gene, complete cds Length = 5125 Score = 48.1 bits (24), Expect = 0.25 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 1770 ctccctcctatccaaaataagtgttgcagttta-aactgggtttagttcaaaacttg-ac 1827 |||||||| |||||||||||||| || ||| ||||||| |||| ||||||||| || Sbjct: 1919 ctccctccgatccaaaataagtgacccaattttgaactggggttagctcaaaacttccac 1978 Query: 1828 acttcttatggatcggaggtagta 1851 |||| ||||| ||||||||||||| Sbjct: 1979 actttttatgtatcggaggtagta 2002
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatct 1388 |||||||||||||||||||||||| Sbjct: 10762127 cattgtgaaatggagggagtatct 10762150 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 13986642 cattgtgaaatggagggagtat 13986621
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds Length = 9755 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagag 981 |||||||||||||||||||||||| Sbjct: 7972 tccctccgtaaagaaatataagag 7995
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 48.1 bits (24), Expect = 0.25 Identities = 48/56 (85%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacgc 1013 |||||| ||||| ||||||||||| |||| || |||||| ||||||| ||||||| Sbjct: 7616 tccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgc 7561
>emb|AL929119.19| Zebrafish DNA sequence from clone CH211-214G8 in linkage group 20, complete sequence Length = 136176 Score = 48.1 bits (24), Expect = 0.25 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2071 agagttacctatgaaattgatacactta 2098 ||||||||||| |||||||||||||||| Sbjct: 24008 agagttacctaagaaattgatacactta 24035
>gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete sequence Length = 130381 Score = 48.1 bits (24), Expect = 0.25 Identities = 42/48 (87%) Strand = Plus / Minus Query: 2842 gagggtactagttgatgtggaacgtggtagaactgttcctaattggcg 2889 |||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct: 24152 gagggtgcttgtggatgttgaacgtgggagaactgttccaaattggcg 24105
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 48.1 bits (24), Expect = 0.25 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatct 1388 |||||||||||||||||||||||| Sbjct: 98745 cattgtgaaatggagggagtatct 98768
>emb|CR855197.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0115B09, complete sequence Length = 127419 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatctgta 1391 |||||||||| |||||||||||||||| Sbjct: 26911 cattgtgaaacggagggagtatctgta 26937
>emb|BX664618.13| Zebrafish DNA sequence from clone DKEYP-82A1 in linkage group 8, complete sequence Length = 135906 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 131484 tgctaaacaaataaaatattaat 131506
>gb|CP000395.1| Borrelia afzelii PKo, complete genome Length = 905394 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1569 tcatacaaaagctgaaggaaatt 1591 ||||||||||||||||||||||| Sbjct: 576759 tcatacaaaagctgaaggaaatt 576737
>gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete sequence Length = 102226 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3294 gggatcgtgagagagatgatggg 3316 ||||||||||||||||||||||| Sbjct: 47626 gggatcgtgagagagatgatggg 47648
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1569 tcatacaaaagctgaaggaaatt 1591 ||||||||||||||||||||||| Sbjct: 574934 tcatacaaaagctgaaggaaatt 574912
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 46.1 bits (23), Expect = 1.0 Identities = 29/31 (93%) Strand = Plus / Plus Query: 957 atccctccgtaaagaaatataagagcattta 987 ||||||||||||| |||||||||||||||| Sbjct: 88535 atccctccgtaaactaatataagagcattta 88565
>gb|AC140721.15| Medicago truncatula clone mth2-16c16, complete sequence Length = 128119 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1740 gttctaacatcaataatttgaaa 1762 ||||||||||||||||||||||| Sbjct: 20906 gttctaacatcaataatttgaaa 20928
>gb|AC140412.2| Mus musculus BAC clone RP24-173O20 from chromosome 14, complete sequence Length = 152809 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2255 ttgttttctgctatttttctttt 2277 ||||||||||||||||||||||| Sbjct: 121507 ttgttttctgctatttttctttt 121529
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatc 1387 ||||||||||||||||||||||| Sbjct: 91003 cattgtgaaatggagggagtatc 91025
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence Length = 159158 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2255 ttgttttctgctatttttctttt 2277 ||||||||||||||||||||||| Sbjct: 7712 ttgttttctgctatttttctttt 7734
>gb|AY137517.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 3 (hir3) gene, complete cds Length = 6537 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1767 gtactccctcctatccaaaataagtgt 1793 ||||||||||| ||||||||||||||| Sbjct: 5909 gtactccctccgatccaaaataagtgt 5883
>dbj|AP009046.1| Hyphantria cunea nucleopolyhedrovirus genomic DNA, complete genome Length = 132959 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3319 tgcaagttacgaacgtgaccgcg 3341 ||||||||||||||||||||||| Sbjct: 116571 tgcaagttacgaacgtgaccgcg 116549
>gb|AC159716.6| Mus musculus 6 BAC RP23-80P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 239739 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 49642 gggacagagatagggatagggac 49664
>emb|CR450748.10| Zebrafish DNA sequence from clone CH211-157P5, complete sequence Length = 191667 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 183945 tgctaaacaaataaaatattaat 183967
>emb|BX936340.7| Zebrafish DNA sequence from clone CH211-286P18 in linkage group 12, complete sequence Length = 85745 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 45396 tgctaaacaaataaaatattaat 45418
>emb|BX957328.6| Zebrafish DNA sequence from clone CH211-187F22, complete sequence Length = 106510 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 32259 tgctaaacaaataaaatattaat 32237
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatc 1387 ||||||||||||||||||||||| Sbjct: 15098039 cattgtgaaatggagggagtatc 15098061 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 3565045 cattgtgaaatggagggagtat 3565066 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 8435088 cattgtgaaatggagggagtat 8435067
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1364 gcattgtgaaatggagggagtat 1386 ||||||||||||||||||||||| Sbjct: 11421150 gcattgtgaaatggagggagtat 11421172 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 202567 cattgtgaaatggagggagtat 202588 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 1134777 cattgtgaaatggagggagtat 1134756 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 13159621 cattgtgaaatggagggagtat 13159642
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatctgta 1391 |||||||||| |||||||||||||||| Sbjct: 26987638 cattgtgaaacggagggagtatctgta 26987664
>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7, complete sequence Length = 168455 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 96255 tgctaaacaaataaaatattaat 96277
>emb|CR450782.5| Zebrafish DNA sequence from clone CH211-245B21 in linkage group 3, complete sequence Length = 99702 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 38027 tgctaaacaaataaaatattaat 38049
>gb|AC154859.2| Mus musculus BAC clone RP23-14B14 from chromosome 16, complete sequence Length = 200016 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 103792 gggacagagatagggatagggac 103770 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 103810 gggacagagatagggatagggac 103788 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 103828 gggacagagatagggatagggac 103806 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 103846 gggacagagatagggatagggac 103824 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3204 gggacagagatagggatagggac 3226 ||||||||||||||||||||||| Sbjct: 103864 gggacagagatagggatagggac 103842
>emb|BX119975.7| Zebrafish DNA sequence from clone CH211-200A16 in linkage group 8, complete sequence Length = 154904 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 77631 tgctaaacaaataaaatattaat 77653
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 46.1 bits (23), Expect = 1.0 Identities = 47/55 (85%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcatttatataactaaaatagtgatataaacg 1012 ||||||| | ||| ||||||||||| |||| ||||||||| || |||| |||||| Sbjct: 1782 tccctccatgaagtaatataagagcgtttagataactaaagtaatgatctaaacg 1728
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtatctgta 1391 |||||||||| |||||||||||||||| Sbjct: 55339 cattgtgaaacggagggagtatctgta 55365
>emb|BX640547.35| Zebrafish DNA sequence from clone DKEY-4J21 in linkage group 14, complete sequence Length = 230865 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 21583 tgctaaacaaataaaatattaat 21605
>emb|CR361561.8| Zebrafish DNA sequence from clone CH211-218K8 in linkage group 25, complete sequence Length = 200274 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 116152 tgctaaacaaataaaatattaat 116174
>emb|BX649417.8| Zebrafish DNA sequence from clone CH211-227P7 in linkage group 4 Contains a novel gene and three CpG islands, complete sequence Length = 174290 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 162566 tgctaaacaaataaaatattaat 162544
>emb|BX005301.9| Zebrafish DNA sequence from clone CH211-221N20 in linkage group 20, complete sequence Length = 112811 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 31620 tgctaaacaaataaaatattaat 31642 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 53144 tgctaaacaaataaaatattaat 53166
>emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 in linkage group 1, complete sequence Length = 159780 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 140829 tgctaaacaaataaaatattaat 140807
>emb|CR293515.12| Zebrafish DNA sequence from clone CH211-106H4 in linkage group 2, complete sequence Length = 192891 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 88735 tgctaaacaaataaaatattaat 88713
>emb|BX511037.9| Zebrafish DNA sequence from clone DKEY-66N24 in linkage group 1, complete sequence Length = 148544 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 122437 tgctaaacaaataaaatattaat 122459
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1364 gcattgtgaaatggagggagtat 1386 ||||||||||||||||||||||| Sbjct: 108859 gcattgtgaaatggagggagtat 108881
>emb|BX511230.4| Zebrafish DNA sequence from clone DKEY-14H23 in linkage group 17, complete sequence Length = 156048 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1044 tgcatattagttttgtacaaagt 1066 ||||||||||||||||||||||| Sbjct: 149383 tgcatattagttttgtacaaagt 149405
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 965 gtaaagaaatataagagcattta 987 ||||||||||||||||||||||| Sbjct: 53525 gtaaagaaatataagagcattta 53503
>emb|BX005389.12| Zebrafish DNA sequence from clone DKEY-10F11 in linkage group 16, complete sequence Length = 221363 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 140612 tgctaaacaaataaaatattaat 140590
>emb|BX248497.11| Zebrafish DNA sequence from clone DKEY-181M9 in linkage group 2, complete sequence Length = 145610 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 12985 tgctaaacaaataaaatattaat 12963
>emb|BX005223.19| Zebrafish DNA sequence from clone DKEY-53K12, complete sequence Length = 242587 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 177024 tgctaaacaaataaaatattaat 177002
>emb|BX537288.7| Zebrafish DNA sequence from clone DKEY-264B2 in linkage group 2, complete sequence Length = 114103 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 7883 tgctaaacaaataaaatattaat 7861
>emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, complete sequence Length = 163495 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 87450 tgctaaacaaataaaatattaat 87428
>emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on chromosome 2, complete sequence Length = 160386 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Plus Query: 908 ttattttattttactttttccaaaaat 934 ||||||||||||||||||| ||||||| Sbjct: 136393 ttattttattttactttttacaaaaat 136419
>emb|AL935317.10| Zebrafish DNA sequence from clone CH211-199I10, complete sequence Length = 200098 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 53675 tgctaaacaaataaaatattaat 53697
>emb|AL845369.7| Zebrafish DNA sequence from clone CH211-12E13 in linkage group 5, complete sequence Length = 190981 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1493 tgctaaacaaataaaatattaat 1515 ||||||||||||||||||||||| Sbjct: 94595 tgctaaacaaataaaatattaat 94617
>ref|NM_001059973.1| Oryza sativa (japonica cultivar-group) Os04g0539800 (Os04g0539800) mRNA, complete cds Length = 1335 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1366 attgtgaaatggagggagtatctgta 1391 ||||||||| |||||||||||||||| Sbjct: 1325 attgtgaaacggagggagtatctgta 1300
>ref|XM_633170.1| Dictyostelium discoideum AX4 RNA-binding region-containing protein (RNP-1) (DDB_0233345) mRNA, complete cds Length = 3108 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2758 aggatatgcattcatagagtat 2779 |||||||||||||||||||||| Sbjct: 1884 aggatatgcattcatagagtat 1905
>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete sequence Length = 201050 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1496 taaacaaataaaatattaatta 1517 |||||||||||||||||||||| Sbjct: 45396 taaacaaataaaatattaatta 45375
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 |||||||||||| |||||||||||||||| Sbjct: 150195 tccctccgtaaactaatataagagcattta 150224
>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0069E11, complete sequence Length = 136959 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 114014 cattgtgaaatggagggagtat 113993
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 82182 cattgtgaaatggagggagtat 82203
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 117342 cattgtgaaatggagggagtat 117363
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 24353 cattgtgaaatggagggagtat 24332
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 129035 cattgtgaaatggagggagtat 129014
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 85530 cattgtgaaatggagggagtat 85551
>gb|BC071088.1| Xenopus laevis cDNA clone MGC:80073 IMAGE:4679943, complete cds Length = 973 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 823 gatctcgttgttgttttcaaaa 844 |||||||||||||||||||||| Sbjct: 109 gatctcgttgttgttttcaaaa 88
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 102798 cattgtgaaatggagggagtat 102777
>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence Length = 193068 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1496 taaacaaataaaatattaatta 1517 |||||||||||||||||||||| Sbjct: 62823 taaacaaataaaatattaatta 62844
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcattta 987 |||||||||||| |||||||||||||||| Sbjct: 611 tccctccgtaaactaatataagagcattta 582
>gb|AC125527.3| Mus musculus BAC clone RP24-550H17 from chromosome 1, complete sequence Length = 153191 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 905 ctcttattttattttacttttt 926 |||||||||||||||||||||| Sbjct: 7155 ctcttattttattttacttttt 7176
>gb|AC133165.3| Mus musculus BAC clone RP24-357P16 from chromosome 13, complete sequence Length = 181278 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1496 taaacaaataaaatattaatta 1517 |||||||||||||||||||||| Sbjct: 173644 taaacaaataaaatattaatta 173665
>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence Length = 184002 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2306 tgtaactgttgctgctattttc 2327 |||||||||||||||||||||| Sbjct: 15429 tgtaactgttgctgctattttc 15408
>gb|AY383654.1| Xenopus laevis p27BBP/eIF6 mRNA, complete cds Length = 1084 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 823 gatctcgttgttgttttcaaaa 844 |||||||||||||||||||||| Sbjct: 106 gatctcgttgttgttttcaaaa 85
>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence Length = 196584 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 905 ctcttattttattttacttttt 926 |||||||||||||||||||||| Sbjct: 119004 ctcttattttattttacttttt 119025
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 905 ctcttattttattttacttttt 926 |||||||||||||||||||||| Sbjct: 138531 ctcttattttattttacttttt 138552
>gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome 16, complete sequence Length = 184984 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 906 tcttattttattttactttttc 927 |||||||||||||||||||||| Sbjct: 92135 tcttattttattttactttttc 92114
>emb|CT010458.8| Mouse DNA sequence from clone RP23-279C9 on chromosome 13, complete sequence Length = 240541 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1496 taaacaaataaaatattaatta 1517 |||||||||||||||||||||| Sbjct: 196629 taaacaaataaaatattaatta 196608
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 4864048 cattgtgaaatggagggagtat 4864069 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 16209496 cattgtgaaatggagggagtat 16209475
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 17811977 cattgtgaaatggagggagtat 17811998 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 22856818 cattgtgaaatggagggagtat 22856797 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 28071713 cattgtgaaatggagggagtat 28071692
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 2427198 cattgtgaaatggagggagtat 2427177 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 7649135 cattgtgaaatggagggagtat 7649156 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 20290763 cattgtgaaatggagggagtat 20290742
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 4303977 cattgtgaaatggagggagtat 4303956
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1364 gcattgtgaaatggagggagta 1385 |||||||||||||||||||||| Sbjct: 33865815 gcattgtgaaatggagggagta 33865836
>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three novel pseudogenes, a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), two novel genes, the 5' end of a novel gene similar to ankyrin repeat domain 20A (ANKRD20A) and three CpG islands, complete sequence Length = 165886 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1546 tctaacatgtattcatttaaaa 1567 |||||||||||||||||||||| Sbjct: 160081 tctaacatgtattcatttaaaa 160060
>emb|AL359738.7| Human DNA sequence from clone RP11-249D14 on chromosome 1 Contains part of a gene for a novel protein and 3' end of a novel gene, complete sequence Length = 77555 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gggcagggccaccctacgggcc 181 |||||||||||||||||||||| Sbjct: 29062 gggcagggccaccctacgggcc 29041
>emb|AL137142.20| Human DNA sequence from clone RP11-173P16 on chromosome 13q12.2-13.3 Contains a novel pseudogene, the gene for heat shock 105kD (HSP105B) (HSP105A KIAA0201 NY-CO-25), the 5' end of a novel gene and two CpG islands, complete sequence Length = 113850 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2316 gctgctattttcttttcttggc 2337 |||||||||||||||||||||| Sbjct: 22678 gctgctattttcttttcttggc 22699
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 89522 cattgtgaaatggagggagtat 89543
>emb|AL022151.2|HS199L16 Human DNA sequence from clone RP1-199L16 on chromosome Xq22.1-22.3 Contains a ribosomal protein S29 (RPS29) pseudogene, complete sequence Length = 134963 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 908 ttattttattttactttttcca 929 |||||||||||||||||||||| Sbjct: 49561 ttattttattttactttttcca 49540
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 134242 cattgtgaaatggagggagtat 134221
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1062 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 958 tccctccgtaaagaaatataagagcattta 987 |||||| |||||||||||||||||| |||| Sbjct: 808 tccctctgtaaagaaatataagagcgttta 837 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcattta 987 |||||| |||||||||||||||||| |||| Sbjct: 880 tccctctgtaaagaaatataagagcgttta 851
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2125 ttcagacagaattttctgcttc 2146 |||||||||||||||||||||| Sbjct: 74606 ttcagacagaattttctgcttc 74585
>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete sequence Length = 52119 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2254 attgttttctgctatttttcttttct 2279 ||||| |||||||||||||||||||| Sbjct: 19079 attgtgttctgctatttttcttttct 19104
>gb|AC154364.2| Mus musculus BAC clone RP24-559G11 from chromosome 13, complete sequence Length = 133661 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1496 taaacaaataaaatattaatta 1517 |||||||||||||||||||||| Sbjct: 9496 taaacaaataaaatattaatta 9517
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 149205 cattgtgaaatggagggagtat 149184
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 33483 cattgtgaaatggagggagtat 33504
>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence Length = 184868 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2254 attgttttctgctatttttcttttct 2279 ||||| |||||||||||||||||||| Sbjct: 46946 attgtgttctgctatttttcttttct 46921
>gb|AC092837.5| Homo sapiens BAC clone RP11-137J9 from 2, complete sequence Length = 147820 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1371 gaaatggagggagtatctgtag 1392 |||||||||||||||||||||| Sbjct: 2671 gaaatggagggagtatctgtag 2650
>gb|AC005484.2|AC005484 Homo sapiens PAC clone RP5-847O8 from 14q24.3, complete sequence Length = 131943 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 905 ctcttattttattttacttttt 926 |||||||||||||||||||||| Sbjct: 105975 ctcttattttattttacttttt 105996
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1364 gcattgtgaaatggagggagta 1385 |||||||||||||||||||||| Sbjct: 104862 gcattgtgaaatggagggagta 104883
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 67463 cattgtgaaatggagggagtat 67484
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 111000 cattgtgaaatggagggagtat 110979
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 76809 cattgtgaaatggagggagtat 76830
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 140319 cattgtgaaatggagggagtat 140298
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 89116 cattgtgaaatggagggagtat 89095
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 30656 cattgtgaaatggagggagtat 30635
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1364 gcattgtgaaatggagggagta 1385 |||||||||||||||||||||| Sbjct: 190711 gcattgtgaaatggagggagta 190690
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 69208 cattgtgaaatggagggagtat 69187
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 958 tccctccgtaaagaaatataagagcattta 987 |||||||||||| |||||||||||||||| Sbjct: 34591 tccctccgtaaactaatataagagcattta 34562
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011E04 Length = 136767 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 86371 cattgtgaaatggagggagtat 86392
>gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete sequence Length = 127642 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 9762 cattgtgaaatggagggagtat 9741
>gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete sequence Length = 138465 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 5030 cattgtgaaatggagggagtat 5051
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 74374 cattgtgaaatggagggagtat 74353
>gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, complete sequence Length = 222700 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 ttattttattttactttttccaaaaa 933 ||||||||||||||||||| |||||| Sbjct: 91084 ttattttattttacttttttcaaaaa 91109
>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete sequence Length = 219376 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1546 tctaacatgtattcatttaaaa 1567 |||||||||||||||||||||| Sbjct: 166600 tctaacatgtattcatttaaaa 166579
>gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, complete sequence Length = 179257 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 906 tcttattttattttactttttc 927 |||||||||||||||||||||| Sbjct: 171904 tcttattttattttactttttc 171883
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 17975 cattgtgaaatggagggagtat 17954
>emb|BX005066.3| Zebrafish DNA sequence from clone CH211-152F23 in linkage group 3, complete sequence Length = 172909 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1501 aaataaaatattaattagattc 1522 |||||||||||||||||||||| Sbjct: 132950 aaataaaatattaattagattc 132929
>emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on chromosome 16, complete sequence Length = 231697 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 906 tcttattttattttactttttc 927 |||||||||||||||||||||| Sbjct: 126144 tcttattttattttactttttc 126165
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 33847 cattgtgaaatggagggagtat 33868
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 95911 cattgtgaaatggagggagtat 95890
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1365 cattgtgaaatggagggagtat 1386 |||||||||||||||||||||| Sbjct: 132477 cattgtgaaatggagggagtat 132456 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 779,517,179 Number of extensions: 43470926 Number of successful extensions: 318187 Number of sequences better than 10.0: 165 Number of HSP's gapped: 318138 Number of HSP's successfully gapped: 340 Length of query: 4091 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 4067 Effective length of database: 18,499,340,271 Effective search space: 75236816882157 Effective search space used: 75236816882157 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
