| Clone Name | FLbaf78o04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK240927.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065040F16, full insert sequence Length = 1541 Score = 912 bits (460), Expect = 0.0 Identities = 951/1114 (85%), Gaps = 3/1114 (0%) Strand = Plus / Plus Query: 105 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtcgcccgccagggt 164 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 261 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtctcccgccagggc 320 Query: 165 gtgtttaagcagtttggggctgg---tggaaattctgataatgcattcacagacgagtca 221 |||||||||| ||||| |||| ||||||||| || ||||| || ||||| || ||| Sbjct: 321 gtgtttaagccatttggagctgcctatggaaattcagaaaatgcgtttacagatgaatca 380 Query: 222 gaagttaaattacatcagagattggaaaaactttacttatcaactcgtgctgccaaacat 281 |||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 381 gaagttaatctacaccagaggctggaaaaactttacttatcaactcgtgctgctaaacat 440 Query: 282 tttcaaagggacgttgttcggggtgtggagggctacatagtgacaggatctaagcagatt 341 |||||||||||| |||| |||||||||||||| |||||||| || |||||||| || || Sbjct: 441 tttcaaagggacattgtccggggtgtggagggatacatagtcactggatctaaacaagtt 500 Query: 342 gagataggaaacaaattgtctgatgacagccagaaatatggcagtgaaaacacatgtaca 401 || |||||||| |||||||| || || |||||||||||||||| || ||||||||||||| Sbjct: 501 gacataggaaataaattgtccgacgatagccagaaatatggcactggaaacacatgtaca 560 Query: 402 agtggtaatactttgtccagagctgctacatactatggaaaggcgcgttcactgatagaa 461 |||| ||| ||||| |||| ||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 561 agtgataacactttatccaaggctgctatgtactatgggaaggctcgttctctgatggaa 620 Query: 462 aaggaacgcgggaacatgctgaaagcatttggtactcaggtggcagagcctctacgggca 521 |||||||| ||||||||| ||| |||||||||||| |||||||||||||| || || ||| Sbjct: 621 aaggaacgtgggaacatgttgagagcatttggtacacaggtggcagagccactgcgagca 680 Query: 522 atggtaatgggtgcccctctagaggatgctagacatctagcccagagatatgacagaata 581 ||||| |||||||| ||| |||| ||||| |||||||||||||| ||||||||| |||| Sbjct: 681 atggtcatgggtgcgcctttagaagatgcgagacatctagcccaaagatatgaccgaatg 740 Query: 582 aggcaagaagctgatgctcaggtcgttgaagtttcaaggcgtcaaagcagagtaagagaa 641 |||||||||||||| || |||| |||||||||||||| || |||| |||||||||||| Sbjct: 741 aggcaagaagctgaagcccaggctgttgaagtttcaagacggcaaaacagagtaagagag 800 Query: 642 tctgctgggaatagcgacgtgatatcaaagttggaagcagccgagtataaacttgaagaa 701 || ||| |||| | || |||||| ||||| ||||||| || || || |||||||||||| Sbjct: 801 tcagctccgaatggagatgtgataacaaagctggaagctgctgaatacaaacttgaagaa 860 Query: 702 ctgaagtcaaacatggtgggattaggaaaggaagctgtttcagctatggccgccgtagag 761 || ||||||| |||||| |||||||| |||||||||||| |||| ||||| ||||| ||| Sbjct: 861 cttaagtcaagcatggtaggattagggaaggaagctgttgcagcaatggctgccgttgag 920 Query: 762 gggcagcagcaaagattaacattacaacgcctcatagcaatggttgaggccgagagaact 821 | ||||| |||||||| |||||||| ||||| || || |||||||| ||||| ||| | Sbjct: 921 gctcagcaacaaagattgacattacagcgccttattgcgatggttgaagccgaaagagcc 980 Query: 822 tatcatcagaaagtcctggagatccttgaccatttggaagaagaaatggtatctgagcgc 881 || ||||||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||| Sbjct: 981 taccatcagagagttctggagatccttgaccacctggaacaagaaatggtatcagagcgt 1040 Query: 882 caaaaaatcgaagcacctccaccccctgcagcagaaagttatacgtcaccgccaccacca 941 ||||| || ||||||||||| |||| ||||||||| ||| | | ||| |||||||||| Sbjct: 1041 caaaagattgaagcacctccgaccccatcagcagaaaattacatggcacagccaccacca 1100 Query: 942 tcatatgacgaagttaatggcatgtttgcctccacttctgctgatcaggcagtcaactct 1001 || ||||||||||| |||||||||||||| ||| | |||| ||| | |||| | ||| Sbjct: 1101 tcttatgacgaagtcaatggcatgtttgcatcctcctctgtcgatgattcagtgacatct 1160 Query: 1002 gtcgatttgttcctgggagaggccctcgattccttcaaggctgagagtgagtttgagctc 1061 || ||||| ||||| ||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 1161 gtagatttcttcctaggagaggcccttgattccttcaaggctgaaagtgagtctgagctt 1220 Query: 1062 aacttatcagttggtgacatcgttatcgtccgaaagatatcaagcaacggctgggcggaa 1121 ||||| |||| ||| ||||| ||||| ||||| |||||||||| ||| || ||||| ||| Sbjct: 1221 aacttgtcagctggagacattgttattgtccggaagatatcaaccaatggttgggcagaa 1280 Query: 1122 ggtgaatgcaagggaaaagcaggatggttcccacatgcttacgtcgaaaggcgcgagcgt 1181 || |||||||||||||||||||||||||||||||||| ||| ||||||| || ||||| Sbjct: 1281 ggcgaatgcaagggaaaagcaggatggttcccacatggttatatcgaaagacgagagcga 1340 Query: 1182 gttctggcgagcaaagtcccgcatattttctagg 1215 ||||| || ||||| || || ||||||||||||| Sbjct: 1341 gttctagctagcaaggttccacatattttctagg 1374
>ref|NM_001059973.1| Oryza sativa (japonica cultivar-group) Os04g0539800 (Os04g0539800) mRNA, complete cds Length = 1335 Score = 890 bits (449), Expect = 0.0 Identities = 931/1091 (85%), Gaps = 3/1091 (0%) Strand = Plus / Plus Query: 108 atggaggcgctgtggaagcaggcctccaggctcaaggagcaggtcgcccgccagggtgtg 167 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1 atggaggcgctgtggaagcaggcctccaggctcaaggagcaggtctcccgccagggcgtg 60 Query: 168 tttaagcagtttggggctgg---tggaaattctgataatgcattcacagacgagtcagaa 224 ||||||| ||||| |||| ||||||||| || ||||| || ||||| || |||||| Sbjct: 61 tttaagccatttggagctgcctatggaaattcagaaaatgcgtttacagatgaatcagaa 120 Query: 225 gttaaattacatcagagattggaaaaactttacttatcaactcgtgctgccaaacatttt 284 ||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 gttaatctacaccagaggctggaaaaactttacttatcaactcgtgctgctaaacatttt 180 Query: 285 caaagggacgttgttcggggtgtggagggctacatagtgacaggatctaagcagattgag 344 ||||||||| |||| |||||||||||||| |||||||| || |||||||| || |||| Sbjct: 181 caaagggacattgtccggggtgtggagggatacatagtcactggatctaaacaagttgac 240 Query: 345 ataggaaacaaattgtctgatgacagccagaaatatggcagtgaaaacacatgtacaagt 404 |||||||| |||||||| || || |||||||||||||||| || |||||||||||||||| Sbjct: 241 ataggaaataaattgtccgacgatagccagaaatatggcactggaaacacatgtacaagt 300 Query: 405 ggtaatactttgtccagagctgctacatactatggaaaggcgcgttcactgatagaaaag 464 | ||| ||||| |||| ||||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 301 gataacactttatccaaggctgctatgtactatgggaaggctcgttctctgatggaaaag 360 Query: 465 gaacgcgggaacatgctgaaagcatttggtactcaggtggcagagcctctacgggcaatg 524 ||||| ||||||||| ||| |||||||||||| |||||||||||||| || || |||||| Sbjct: 361 gaacgtgggaacatgttgagagcatttggtacacaggtggcagagccactgcgagcaatg 420 Query: 525 gtaatgggtgcccctctagaggatgctagacatctagcccagagatatgacagaataagg 584 || |||||||| ||| |||| ||||| |||||||||||||| ||||||||| |||| ||| Sbjct: 421 gtcatgggtgcgcctttagaagatgcgagacatctagcccaaagatatgaccgaatgagg 480 Query: 585 caagaagctgatgctcaggtcgttgaagtttcaaggcgtcaaagcagagtaagagaatct 644 ||||||||||| || |||| |||||||||||||| || |||| |||||||||||| || Sbjct: 481 caagaagctgaagcccaggctgttgaagtttcaagacggcaaaacagagtaagagagtca 540 Query: 645 gctgggaatagcgacgtgatatcaaagttggaagcagccgagtataaacttgaagaactg 704 ||| |||| | || |||||| ||||| ||||||| || || || |||||||||||||| Sbjct: 541 gctccgaatggagatgtgataacaaagctggaagctgctgaatacaaacttgaagaactt 600 Query: 705 aagtcaaacatggtgggattaggaaaggaagctgtttcagctatggccgccgtagagggg 764 ||||||| |||||| |||||||| |||||||||||| |||| ||||| ||||| |||| Sbjct: 601 aagtcaagcatggtaggattagggaaggaagctgttgcagcaatggctgccgttgaggct 660 Query: 765 cagcagcaaagattaacattacaacgcctcatagcaatggttgaggccgagagaacttat 824 ||||| |||||||| |||||||| ||||| || || |||||||| ||||| ||| | || Sbjct: 661 cagcaacaaagattgacattacagcgccttattgcgatggttgaagccgaaagagcctac 720 Query: 825 catcagaaagtcctggagatccttgaccatttggaagaagaaatggtatctgagcgccaa 884 ||||||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||| Sbjct: 721 catcagagagttctggagatccttgaccacctggaacaagaaatggtatcagagcgtcaa 780 Query: 885 aaaatcgaagcacctccaccccctgcagcagaaagttatacgtcaccgccaccaccatca 944 || || ||||||||||| |||| ||||||||| ||| | | ||| |||||||||||| Sbjct: 781 aagattgaagcacctccgaccccatcagcagaaaattacatggcacagccaccaccatct 840 Query: 945 tatgacgaagttaatggcatgtttgcctccacttctgctgatcaggcagtcaactctgtc 1004 ||||||||||| |||||||||||||| ||| | |||| ||| | |||| | ||||| Sbjct: 841 tatgacgaagtcaatggcatgtttgcatcctcctctgtcgatgattcagtgacatctgta 900 Query: 1005 gatttgttcctgggagaggccctcgattccttcaaggctgagagtgagtttgagctcaac 1064 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||| |||||| ||| Sbjct: 901 gatttcttcctaggagaggcccttgattccttcaaggctgaaagtgagtctgagcttaac 960 Query: 1065 ttatcagttggtgacatcgttatcgtccgaaagatatcaagcaacggctgggcggaaggt 1124 || |||| ||| ||||| ||||| ||||| |||||||||| ||| || ||||| ||||| Sbjct: 961 ttgtcagctggagacattgttattgtccggaagatatcaaccaatggttgggcagaaggc 1020 Query: 1125 gaatgcaagggaaaagcaggatggttcccacatgcttacgtcgaaaggcgcgagcgtgtt 1184 |||||||||||||||||||||||||||||||||| ||| ||||||| || ||||| ||| Sbjct: 1021 gaatgcaagggaaaagcaggatggttcccacatggttatatcgaaagacgagagcgagtt 1080 Query: 1185 ctggcgagcaa 1195 || || ||||| Sbjct: 1081 ctagctagcaa 1091
>gb|AY110518.1| Zea mays CL36099_1 mRNA sequence Length = 655 Score = 196 bits (99), Expect = 2e-46 Identities = 189/219 (86%) Strand = Plus / Plus Query: 664 tatcaaagttggaagcagccgagtataaacttgaagaactgaagtcaaacatggtgggat 723 ||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 33 tatcaaaattggaagctgccgagtacaagcttgaagaactgaagtcaaacatggtgggat 92 Query: 724 taggaaaggaagctgtttcagctatggccgccgtagaggggcagcagcaaagattaacat 783 |||| ||||||||| || |||| ||| | || || |||| ||||||||| | || || | Sbjct: 93 tagggaaggaagctattgcagcaatgtcggctgttgaggctcagcagcaacggttgacct 152 Query: 784 tacaacgcctcatagcaatggttgaggccgagagaacttatcatcagaaagtcctggaga 843 |||| || ||||| ||| |||||||||| ||||||||||| ||||||| ||| ||||||| Sbjct: 153 tacagcgtctcattgcactggttgaggctgagagaacttaccatcagagagttctggaga 212 Query: 844 tccttgaccatttggaagaagaaatggtatctgagcgcc 882 | |||||| | ||||||||||||||||| |||||||||| Sbjct: 213 tacttgacaaattggaagaagaaatggtgtctgagcgcc 251 Score = 165 bits (83), Expect = 5e-37 Identities = 173/203 (85%) Strand = Plus / Plus Query: 1005 gatttgttcctgggagaggccctcgattccttcaaggctgagagtgagtttgagctcaac 1064 ||||| ||||| ||||||||||| ||||| || || ||||| |||||||||||||| | | Sbjct: 377 gatttcttccttggagaggcccttgattcatttaatgctgaaagtgagtttgagcttacc 436 Query: 1065 ttatcagttggtgacatcgttatcgtccgaaagatatcaagcaacggctgggcggaaggt 1124 || |||| ||||||||| || || ||||||||||| |||||||| || ||||| |||||| Sbjct: 437 ttgtcagctggtgacattgtaattgtccgaaagatctcaagcaatggttgggcagaaggt 496 Query: 1125 gaatgcaagggaaaagcaggatggttcccacatgcttacgtcgaaaggcgcgagcgtgtt 1184 ||||||||||| ||||||||||||||||| |||||||| | ||||||| || |||||| Sbjct: 497 gaatgcaagggcaaagcaggatggttccctcatgcttatattgaaaggcaggaacgtgtt 556 Query: 1185 ctggcgagcaaagtcccgcatat 1207 || || |||||||| || ||||| Sbjct: 557 ctagcaagcaaagttccacatat 579
>emb|CR855197.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0115B09, complete sequence Length = 127419 Score = 147 bits (74), Expect = 1e-31 Identities = 137/158 (86%) Strand = Plus / Minus Query: 345 ataggaaacaaattgtctgatgacagccagaaatatggcagtgaaaacacatgtacaagt 404 |||||||| |||||||| || || |||||||||||||||| || |||||||||||||||| Sbjct: 30650 ataggaaataaattgtccgacgatagccagaaatatggcactggaaacacatgtacaagt 30591 Query: 405 ggtaatactttgtccagagctgctacatactatggaaaggcgcgttcactgatagaaaag 464 | ||| ||||| |||| ||||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 30590 gataacactttatccaaggctgctatgtactatgggaaggctcgttctctgatggaaaag 30531 Query: 465 gaacgcgggaacatgctgaaagcatttggtactcaggt 502 ||||| ||||||||| ||| |||||||||||| ||||| Sbjct: 30530 gaacgtgggaacatgttgagagcatttggtacacaggt 30493 Score = 143 bits (72), Expect = 2e-30 Identities = 159/188 (84%) Strand = Plus / Minus Query: 606 gttgaagtttcaaggcgtcaaagcagagtaagagaatctgctgggaatagcgacgtgata 665 |||||||||||||| || |||| |||||||||||| || ||| |||| | || |||||| Sbjct: 29609 gttgaagtttcaagacggcaaaacagagtaagagagtcagctccgaatggagatgtgata 29550 Query: 666 tcaaagttggaagcagccgagtataaacttgaagaactgaagtcaaacatggtgggatta 725 ||||| ||||||| || || || |||||||||||||| ||||||| |||||| |||||| Sbjct: 29549 acaaagctggaagctgctgaatacaaacttgaagaacttaagtcaagcatggtaggatta 29490 Query: 726 ggaaaggaagctgtttcagctatggccgccgtagaggggcagcagcaaagattaacatta 785 || |||||||||||| |||| ||||| ||||| |||| ||||| |||||||| |||||| Sbjct: 29489 gggaaggaagctgttgcagcaatggctgccgttgaggctcagcaacaaagattgacatta 29430 Query: 786 caacgcct 793 || ||||| Sbjct: 29429 cagcgcct 29422 Score = 111 bits (56), Expect = 7e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 1096 agatatcaagcaacggctgggcggaaggtgaatgcaagggaaaagcaggatggttcccac 1155 ||||||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 28645 agatatcaaccaatggttgggcagaaggcgaatgcaagggaaaagcaggatggttcccac 28586 Query: 1156 atgcttacgtcgaaaggcgcgagcgtgttctggcgagcaaagtcccgcatattttctagg 1215 ||| ||| ||||||| || ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 28585 atggttatatcgaaagacgagagcgagttctagctagcaaggttccacatattttctagg 28526 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 499 aggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatgctagacatc 558 ||||||||||||| || || |||||||| |||||||| ||| |||| ||||| ||||||| Sbjct: 30317 aggtggcagagccactgcgagcaatggtcatgggtgcgcctttagaagatgcgagacatc 30258 Query: 559 tagcccagagatatgacagaataaggcaagaagctgatgctcaggt 604 ||||||| ||||||||| |||| |||||||||||||| || ||||| Sbjct: 30257 tagcccaaagatatgaccgaatgaggcaagaagctgaagcccaggt 30212 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Minus Query: 105 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtcgcccgccagg 162 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 32035 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtctcccgccagg 31978 Score = 87.7 bits (44), Expect = 1e-13 Identities = 89/104 (85%) Strand = Plus / Minus Query: 867 atggtatctgagcgccaaaaaatcgaagcacctccaccccctgcagcagaaagttatacg 926 |||||||| ||||| ||||| || ||||||||||| |||| ||||||||| ||| | | Sbjct: 29121 atggtatcagagcgtcaaaagattgaagcacctccgaccccatcagcagaaaattacatg 29062 Query: 927 tcaccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 ||| |||||||||||| ||||||||||| |||||||||||||| Sbjct: 29061 gcacagccaccaccatcttatgacgaagtcaatggcatgtttgc 29018 Score = 85.7 bits (43), Expect = 4e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 188 tggaaattctgataatgcattcacagacgagtcagaagttaaattacatcagagattgga 247 ||||||||| || ||||| || ||||| || ||||||||||| |||| ||||| |||| Sbjct: 31008 tggaaattcagaaaatgcgtttacagatgaatcagaagttaatctacaccagaggctgga 30949 Query: 248 aaaactttacttatcaactcgtgctgc 274 ||||||||||||||||||||||||||| Sbjct: 30948 aaaactttacttatcaactcgtgctgc 30922 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Minus Query: 1021 aggccctcgattccttcaaggctgagagtgagtttgagctcaacttatcagttggtgaca 1080 ||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| ||| |||| Sbjct: 28862 aggcccttgattccttcaaggctgaaagtgagtctgagcttaacttgtcagctggagaca 28803 Query: 1081 tcgttatcgtccg 1093 | ||||| ||||| Sbjct: 28802 ttgttattgtccg 28790 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 279 cattttcaaagggacgttgttcggggtgtggagggctacatagtgacaggatctaa 334 ||||||||||||||| |||| |||||||||||||| |||||||| || |||||||| Sbjct: 30829 cattttcaaagggacattgtccggggtgtggagggatacatagtcactggatctaa 30774 Score = 48.1 bits (24), Expect = 0.089 Identities = 54/64 (84%) Strand = Plus / Minus Query: 803 ggttgaggccgagagaacttatcatcagaaagtcctggagatccttgaccatttggaaga 862 |||||| ||||| ||| | || ||||||| ||| ||||||||||||||||| ||||| | Sbjct: 29310 ggttgaagccgaaagagcctaccatcagagagttctggagatccttgaccacctggaaca 29251 Query: 863 agaa 866 |||| Sbjct: 29250 agaa 29247
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 147 bits (74), Expect = 1e-31 Identities = 137/158 (86%) Strand = Plus / Minus Query: 345 ataggaaacaaattgtctgatgacagccagaaatatggcagtgaaaacacatgtacaagt 404 |||||||| |||||||| || || |||||||||||||||| || |||||||||||||||| Sbjct: 26991378 ataggaaataaattgtccgacgatagccagaaatatggcactggaaacacatgtacaagt 26991319 Query: 405 ggtaatactttgtccagagctgctacatactatggaaaggcgcgttcactgatagaaaag 464 | ||| ||||| |||| ||||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 26991318 gataacactttatccaaggctgctatgtactatgggaaggctcgttctctgatggaaaag 26991259 Query: 465 gaacgcgggaacatgctgaaagcatttggtactcaggt 502 ||||| ||||||||| ||| |||||||||||| ||||| Sbjct: 26991258 gaacgtgggaacatgttgagagcatttggtacacaggt 26991221 Score = 143 bits (72), Expect = 2e-30 Identities = 159/188 (84%) Strand = Plus / Minus Query: 606 gttgaagtttcaaggcgtcaaagcagagtaagagaatctgctgggaatagcgacgtgata 665 |||||||||||||| || |||| |||||||||||| || ||| |||| | || |||||| Sbjct: 26990337 gttgaagtttcaagacggcaaaacagagtaagagagtcagctccgaatggagatgtgata 26990278 Query: 666 tcaaagttggaagcagccgagtataaacttgaagaactgaagtcaaacatggtgggatta 725 ||||| ||||||| || || || |||||||||||||| ||||||| |||||| |||||| Sbjct: 26990277 acaaagctggaagctgctgaatacaaacttgaagaacttaagtcaagcatggtaggatta 26990218 Query: 726 ggaaaggaagctgtttcagctatggccgccgtagaggggcagcagcaaagattaacatta 785 || |||||||||||| |||| ||||| ||||| |||| ||||| |||||||| |||||| Sbjct: 26990217 gggaaggaagctgttgcagcaatggctgccgttgaggctcagcaacaaagattgacatta 26990158 Query: 786 caacgcct 793 || ||||| Sbjct: 26990157 cagcgcct 26990150 Score = 111 bits (56), Expect = 7e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 1096 agatatcaagcaacggctgggcggaaggtgaatgcaagggaaaagcaggatggttcccac 1155 ||||||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 26989373 agatatcaaccaatggttgggcagaaggcgaatgcaagggaaaagcaggatggttcccac 26989314 Query: 1156 atgcttacgtcgaaaggcgcgagcgtgttctggcgagcaaagtcccgcatattttctagg 1215 ||| ||| ||||||| || ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 26989313 atggttatatcgaaagacgagagcgagttctagctagcaaggttccacatattttctagg 26989254 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 499 aggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatgctagacatc 558 ||||||||||||| || || |||||||| |||||||| ||| |||| ||||| ||||||| Sbjct: 26991045 aggtggcagagccactgcgagcaatggtcatgggtgcgcctttagaagatgcgagacatc 26990986 Query: 559 tagcccagagatatgacagaataaggcaagaagctgatgctcaggt 604 ||||||| ||||||||| |||| |||||||||||||| || ||||| Sbjct: 26990985 tagcccaaagatatgaccgaatgaggcaagaagctgaagcccaggt 26990940 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Minus Query: 105 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtcgcccgccagg 162 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 26992764 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtctcccgccagg 26992707 Score = 87.7 bits (44), Expect = 1e-13 Identities = 89/104 (85%) Strand = Plus / Minus Query: 867 atggtatctgagcgccaaaaaatcgaagcacctccaccccctgcagcagaaagttatacg 926 |||||||| ||||| ||||| || ||||||||||| |||| ||||||||| ||| | | Sbjct: 26989849 atggtatcagagcgtcaaaagattgaagcacctccgaccccatcagcagaaaattacatg 26989790 Query: 927 tcaccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 ||| |||||||||||| ||||||||||| |||||||||||||| Sbjct: 26989789 gcacagccaccaccatcttatgacgaagtcaatggcatgtttgc 26989746 Score = 85.7 bits (43), Expect = 4e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 188 tggaaattctgataatgcattcacagacgagtcagaagttaaattacatcagagattgga 247 ||||||||| || ||||| || ||||| || ||||||||||| |||| ||||| |||| Sbjct: 26991736 tggaaattcagaaaatgcgtttacagatgaatcagaagttaatctacaccagaggctgga 26991677 Query: 248 aaaactttacttatcaactcgtgctgc 274 ||||||||||||||||||||||||||| Sbjct: 26991676 aaaactttacttatcaactcgtgctgc 26991650 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Minus Query: 1021 aggccctcgattccttcaaggctgagagtgagtttgagctcaacttatcagttggtgaca 1080 ||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| ||| |||| Sbjct: 26989590 aggcccttgattccttcaaggctgaaagtgagtctgagcttaacttgtcagctggagaca 26989531 Query: 1081 tcgttatcgtccg 1093 | ||||| ||||| Sbjct: 26989530 ttgttattgtccg 26989518 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 279 cattttcaaagggacgttgttcggggtgtggagggctacatagtgacaggatctaa 334 ||||||||||||||| |||| |||||||||||||| |||||||| || |||||||| Sbjct: 26991557 cattttcaaagggacattgtccggggtgtggagggatacatagtcactggatctaa 26991502 Score = 48.1 bits (24), Expect = 0.089 Identities = 54/64 (84%) Strand = Plus / Minus Query: 803 ggttgaggccgagagaacttatcatcagaaagtcctggagatccttgaccatttggaaga 862 |||||| ||||| ||| | || ||||||| ||| ||||||||||||||||| ||||| | Sbjct: 26990038 ggttgaagccgaaagagcctaccatcagagagttctggagatccttgaccacctggaaca 26989979 Query: 863 agaa 866 |||| Sbjct: 26989978 agaa 26989975
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 147 bits (74), Expect = 1e-31 Identities = 137/158 (86%) Strand = Plus / Minus Query: 345 ataggaaacaaattgtctgatgacagccagaaatatggcagtgaaaacacatgtacaagt 404 |||||||| |||||||| || || |||||||||||||||| || |||||||||||||||| Sbjct: 59079 ataggaaataaattgtccgacgatagccagaaatatggcactggaaacacatgtacaagt 59020 Query: 405 ggtaatactttgtccagagctgctacatactatggaaaggcgcgttcactgatagaaaag 464 | ||| ||||| |||| ||||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 59019 gataacactttatccaaggctgctatgtactatgggaaggctcgttctctgatggaaaag 58960 Query: 465 gaacgcgggaacatgctgaaagcatttggtactcaggt 502 ||||| ||||||||| ||| |||||||||||| ||||| Sbjct: 58959 gaacgtgggaacatgttgagagcatttggtacacaggt 58922 Score = 143 bits (72), Expect = 2e-30 Identities = 159/188 (84%) Strand = Plus / Minus Query: 606 gttgaagtttcaaggcgtcaaagcagagtaagagaatctgctgggaatagcgacgtgata 665 |||||||||||||| || |||| |||||||||||| || ||| |||| | || |||||| Sbjct: 58038 gttgaagtttcaagacggcaaaacagagtaagagagtcagctccgaatggagatgtgata 57979 Query: 666 tcaaagttggaagcagccgagtataaacttgaagaactgaagtcaaacatggtgggatta 725 ||||| ||||||| || || || |||||||||||||| ||||||| |||||| |||||| Sbjct: 57978 acaaagctggaagctgctgaatacaaacttgaagaacttaagtcaagcatggtaggatta 57919 Query: 726 ggaaaggaagctgtttcagctatggccgccgtagaggggcagcagcaaagattaacatta 785 || |||||||||||| |||| ||||| ||||| |||| ||||| |||||||| |||||| Sbjct: 57918 gggaaggaagctgttgcagcaatggctgccgttgaggctcagcaacaaagattgacatta 57859 Query: 786 caacgcct 793 || ||||| Sbjct: 57858 cagcgcct 57851 Score = 111 bits (56), Expect = 7e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 1096 agatatcaagcaacggctgggcggaaggtgaatgcaagggaaaagcaggatggttcccac 1155 ||||||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 57074 agatatcaaccaatggttgggcagaaggcgaatgcaagggaaaagcaggatggttcccac 57015 Query: 1156 atgcttacgtcgaaaggcgcgagcgtgttctggcgagcaaagtcccgcatattttctagg 1215 ||| ||| ||||||| || ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 57014 atggttatatcgaaagacgagagcgagttctagctagcaaggttccacatattttctagg 56955 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 499 aggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatgctagacatc 558 ||||||||||||| || || |||||||| |||||||| ||| |||| ||||| ||||||| Sbjct: 58746 aggtggcagagccactgcgagcaatggtcatgggtgcgcctttagaagatgcgagacatc 58687 Query: 559 tagcccagagatatgacagaataaggcaagaagctgatgctcaggt 604 ||||||| ||||||||| |||| |||||||||||||| || ||||| Sbjct: 58686 tagcccaaagatatgaccgaatgaggcaagaagctgaagcccaggt 58641 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Minus Query: 105 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtcgcccgccagg 162 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 60465 gccatggaggcgctgtggaagcaggcctccaggctcaaggagcaggtctcccgccagg 60408 Score = 87.7 bits (44), Expect = 1e-13 Identities = 89/104 (85%) Strand = Plus / Minus Query: 867 atggtatctgagcgccaaaaaatcgaagcacctccaccccctgcagcagaaagttatacg 926 |||||||| ||||| ||||| || ||||||||||| |||| ||||||||| ||| | | Sbjct: 57550 atggtatcagagcgtcaaaagattgaagcacctccgaccccatcagcagaaaattacatg 57491 Query: 927 tcaccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 ||| |||||||||||| ||||||||||| |||||||||||||| Sbjct: 57490 gcacagccaccaccatcttatgacgaagtcaatggcatgtttgc 57447 Score = 85.7 bits (43), Expect = 4e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 188 tggaaattctgataatgcattcacagacgagtcagaagttaaattacatcagagattgga 247 ||||||||| || ||||| || ||||| || ||||||||||| |||| ||||| |||| Sbjct: 59437 tggaaattcagaaaatgcgtttacagatgaatcagaagttaatctacaccagaggctgga 59378 Query: 248 aaaactttacttatcaactcgtgctgc 274 ||||||||||||||||||||||||||| Sbjct: 59377 aaaactttacttatcaactcgtgctgc 59351 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Minus Query: 1021 aggccctcgattccttcaaggctgagagtgagtttgagctcaacttatcagttggtgaca 1080 ||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| ||| |||| Sbjct: 57291 aggcccttgattccttcaaggctgaaagtgagtctgagcttaacttgtcagctggagaca 57232 Query: 1081 tcgttatcgtccg 1093 | ||||| ||||| Sbjct: 57231 ttgttattgtccg 57219 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 279 cattttcaaagggacgttgttcggggtgtggagggctacatagtgacaggatctaa 334 ||||||||||||||| |||| |||||||||||||| |||||||| || |||||||| Sbjct: 59258 cattttcaaagggacattgtccggggtgtggagggatacatagtcactggatctaa 59203 Score = 48.1 bits (24), Expect = 0.089 Identities = 54/64 (84%) Strand = Plus / Minus Query: 803 ggttgaggccgagagaacttatcatcagaaagtcctggagatccttgaccatttggaaga 862 |||||| ||||| ||| | || ||||||| ||| ||||||||||||||||| ||||| | Sbjct: 57739 ggttgaagccgaaagagcctaccatcagagagttctggagatccttgaccacctggaaca 57680 Query: 863 agaa 866 |||| Sbjct: 57679 agaa 57676
>emb|CT986755.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 751 Score = 61.9 bits (31), Expect = 6e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 1089 gtccgaaagatatcaagcaacggctgggcggaaggtgaatgcaagggaaaagcaggatgg 1148 ||||| ||| |||||| || ||||||||| || || |||||||| |||||||| || ||| Sbjct: 442 gtccgtaaggtatcaaacagcggctgggccgagggagaatgcaaaggaaaagccggttgg 501 Query: 1149 ttcccacatgcttacgtcgaaaggcgcgagcgtgttctggcgagcaa 1195 ||||||| || ||| || || ||| | || ||||||||||| ||||| Sbjct: 502 ttcccacttgattatgtagagaggagggaacgtgttctggcaagcaa 548
>ref|NM_119632.2| Arabidopsis thaliana clathrin binding (AT4G34660) mRNA, complete cds Length = 1610 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 542 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 601 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 602 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 655 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 298 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 357 Query: 306 gtggagggctacatagtgacaggatctaagcagattgagataggaaacaaattgtctgat 365 ||||| || || ||||| ||||| || || || |||| ||||| | ||||||||||| Sbjct: 358 gtggaaggttatatagttacagggtcaaaacaagttgaaataggtacgaaattgtctgag 417 Query: 366 gacagccagaaatatgg 382 || ||| ||||||||| Sbjct: 418 gatagcaggaaatatgg 434 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 979 ccgccacctccatcatatgaggaagctaatggagtgtttgc 1019 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1162 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1202
>gb|AY096478.1| Arabidopsis thaliana unknown protein (At4g34660) mRNA, complete cds Length = 1138 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 386 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 445 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 446 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 499 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 142 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 201 Query: 306 gtggagggctacatagtgacaggatctaagcagattgagataggaaacaaattgtctgat 365 ||||| || || ||||| ||||| || || || |||| ||||| | ||||||||||| Sbjct: 202 gtggaaggttatatagttacagggtcaaaacaagttgaaataggtacgaaattgtctgag 261 Query: 366 gacagccagaaatatgg 382 || ||| ||||||||| Sbjct: 262 gatagcaggaaatatgg 278 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 823 ccgccacctccatcatatgaggaagctaatggagtgtttgc 863 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1006 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1046
>gb|AY072132.1| Arabidopsis thaliana unknown protein (At4g34660) mRNA, complete cds Length = 1639 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 544 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 603 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 604 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 657 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 300 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 359 Query: 306 gtggagggctacatagtgacaggatctaagcagattgagataggaaacaaattgtctgat 365 ||||| || || ||||| ||||| || || || |||| ||||| | ||||||||||| Sbjct: 360 gtggaaggttatatagttacagggtcaaaacaagttgaaataggtacgaaattgtctgag 419 Query: 366 gacagccagaaatatgg 382 || ||| ||||||||| Sbjct: 420 gatagcaggaaatatgg 436 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 981 ccgccacctccatcatatgaggaagctaatggagtgtttgc 1021 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1164 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1204
>gb|AF367774.1|AF367774 Arabidopsis thaliana SH3 domain-containing protein 2 mRNA, complete cds Length = 1594 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 549 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 608 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 609 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 662 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 305 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 364 Query: 306 gtggagggctacatagtgacaggatctaagcagattgagataggaaacaaattgtctgat 365 ||||| || || ||||| ||||| || || || |||| ||||| | ||||||||||| Sbjct: 365 gtggaaggttatatagttacagggtcaaaacaagttgaaataggtacgaaattgtctgag 424 Query: 366 gacagccagaaatatgg 382 || ||| ||||||||| Sbjct: 425 gatagcaggaaatatgg 441 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 986 ccgccacctccatcatatgaggaagctaatggagtgtttgc 1026 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1169 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1209
>gb|AY087158.1| Arabidopsis thaliana clone 32357 mRNA, complete sequence Length = 1595 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 527 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 586 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 587 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 640 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 283 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 342 Query: 306 gtggagggctacatagtgacaggatctaagcagattgagataggaaacaaattgtctgat 365 ||||| || || ||||| ||||| || || || |||| ||||| | ||||||||||| Sbjct: 343 gtggaaggttatatagttacagggtcaaaacaagttgaaataggtacgaaattgtctgag 402 Query: 366 gacagccagaaatatgg 382 || ||| ||||||||| Sbjct: 403 gatagcaggaaatatgg 419 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 964 ccgccacctccatcatatgaggaagctaatggagtgtttgc 1004 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1147 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1187
>emb|BX827471.1|CNS0A3PF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1526 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 490 ttggtactcaggtggcagagcctctacgggcaatggtaatgggtgcccctctagaggatg 549 ||||||| ||||| || ||||| ||||||||||||| |||| || || | ||||||| Sbjct: 540 ttggtacacaggttgctgagccattacgggcaatggttttgggagctccattggaggatg 599 Query: 550 ctagacatctagcccagagatatgacagaataaggcaagaagctgatgctcagg 603 |||||||||| || || | ||||||||||| | ||||||||||| ||||||| Sbjct: 600 ctagacatcttgctcaacgctatgacagaatgcgccaagaagctgaagctcagg 653 Score = 46.1 bits (23), Expect = 0.35 Identities = 68/83 (81%) Strand = Plus / Plus Query: 246 gaaaaactttacttatcaactcgtgctgccaaacattttcaaagggacgttgttcggggt 305 ||||| |||||| |||| ||||||||||| || |||| ||||| || ||||||| ||| Sbjct: 296 gaaaagctttacatatccactcgtgctgctaagcattaccaaagagatattgttcgtggt 355 Query: 306 gtggagggctacatagtgacagg 328 ||||| || || ||||| ||||| Sbjct: 356 gtggaaggttatatagttacagg 378 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 977 ccgccacctccatcatatgaggaagctaatggagtgtttgc 1017 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1160 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 1200
>emb|CT829630.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113N09, full insert sequence Length = 1521 Score = 56.0 bits (28), Expect = 4e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 450 tcactgatagaaaaggaacgcgggaacatgctgaaagcatttggtactcaggtggcagag 509 |||||||| || ||||| | |||||| ||||||||||| | ||||||||||||||||| Sbjct: 582 tcactgatggagaaggagagagggaacctgctgaaagcactgggtactcaggtggcagaa 641 Query: 510 cctctacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagaga 569 || | |||| ||||| ||||| || ||| | || |||||| | ||||| ||||| ||| Sbjct: 642 ccgttgagggctatggtgatgggagctcctttggaagatgctcgccatcttgcccaaaga 701 Query: 570 tatgacag 577 || ||||| Sbjct: 702 tacgacag 709 Score = 42.1 bits (21), Expect = 5.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 121 ggaagcaggcctccaggctcaaggagcaggtcgcccg 157 |||||||||| |||| |||| ||||||||||||||| Sbjct: 247 ggaagcaggcgtccaagctccgggagcaggtcgcccg 283
>ref|NM_001071580.1| Oryza sativa (japonica cultivar-group) Os10g0512700 (Os10g0512700) mRNA, complete cds Length = 1595 Score = 56.0 bits (28), Expect = 4e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 450 tcactgatagaaaaggaacgcgggaacatgctgaaagcatttggtactcaggtggcagag 509 |||||||| || ||||| | |||||| ||||||||||| | ||||||||||||||||| Sbjct: 602 tcactgatggagaaggagagagggaacctgctgaaagcactgggtactcaggtggcagaa 661 Query: 510 cctctacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagaga 569 || | |||| ||||| ||||| || ||| | || |||||| | ||||| ||||| ||| Sbjct: 662 ccgttgagggctatggtgatgggagctcctttggaagatgctcgccatcttgcccaaaga 721 Query: 570 tatgacag 577 || ||||| Sbjct: 722 tacgacag 729 Score = 42.1 bits (21), Expect = 5.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 121 ggaagcaggcctccaggctcaaggagcaggtcgcccg 157 |||||||||| |||| |||| ||||||||||||||| Sbjct: 267 ggaagcaggcgtccaagctccgggagcaggtcgcccg 303
>gb|AC189529.1| Brassica rapa subsp. pekinensis clone KBrB092P05, complete sequence Length = 145402 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Minus Query: 514 tacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagagatatg 573 |||| |||||||| ||||| || || | ||||||||||||||||| || || | |||| Sbjct: 113180 tacgagcaatggtcatgggagctccgttggaggatgctagacatcttgctcaacgttatg 113121 Query: 574 acagaataaggcaagaagctgatgctcaggt 604 ||||||| | ||||||||||| |||||||| Sbjct: 113120 acagaattcgccaagaagctgaagctcaggt 113090 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1105 gcaacggctgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||||| ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 112165 gcaacggatgggcagaaggtgaatgcaaaggcaaagcgggttggttccc 112117
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Minus Query: 514 tacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagagatatg 573 ||||||||||||| |||| || || | ||||||||||||||||| || || | |||| Sbjct: 1768 tacgggcaatggttttgggagctccattggaggatgctagacatcttgctcaacgctatg 1709 Query: 574 acagaataaggcaagaagctgatgctcaggt 604 ||||||| | ||||||||||| |||||||| Sbjct: 1708 acagaatgcgccaagaagctgaagctcaggt 1678 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 474 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 434 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 1010 ccgccacctccatcatatgaggaagctaatggagtgtttgc 970
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Minus Query: 514 tacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagagatatg 573 ||||||||||||| |||| || || | ||||||||||||||||| || || | |||| Sbjct: 192689 tacgggcaatggttttgggagctccattggaggatgctagacatcttgctcaacgctatg 192630 Query: 574 acagaataaggcaagaagctgatgctcaggt 604 ||||||| | ||||||||||| |||||||| Sbjct: 192629 acagaatgcgccaagaagctgaagctcaggt 192599 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 191395 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 191355 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 191931 ccgccacctccatcatatgaggaagctaatggagtgtttgc 191891
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project) Length = 125502 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Minus Query: 514 tacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagagatatg 573 ||||||||||||| |||| || || | ||||||||||||||||| || || | |||| Sbjct: 83000 tacgggcaatggttttgggagctccattggaggatgctagacatcttgctcaacgctatg 82941 Query: 574 acagaataaggcaagaagctgatgctcaggt 604 ||||||| | ||||||||||| |||||||| Sbjct: 82940 acagaatgcgccaagaagctgaagctcaggt 82910 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1113 tgggcggaaggtgaatgcaagggaaaagcaggatggttccc 1153 ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 81706 tgggccgaaggtgaatgcaaaggcaaagctggttggttccc 81666 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 930 ccgccaccaccatcatatgacgaagttaatggcatgtttgc 970 |||||||| ||||||||||| |||| |||||| ||||||| Sbjct: 82242 ccgccacctccatcatatgaggaagctaatggagtgtttgc 82202
>gb|AC108084.4| Homo sapiens chromosome 16 clone CTD-2013N18, complete sequence Length = 126414 Score = 48.1 bits (24), Expect = 0.089 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 tgtggaagcaggcctccaggctca 141 |||||||||||||||||||||||| Sbjct: 58028 tgtggaagcaggcctccaggctca 58051
>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence Length = 145009 Score = 48.1 bits (24), Expect = 0.089 Identities = 24/24 (100%) Strand = Plus / Minus Query: 118 tgtggaagcaggcctccaggctca 141 |||||||||||||||||||||||| Sbjct: 132837 tgtggaagcaggcctccaggctca 132814
>dbj|AK067223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097A14, full insert sequence Length = 1596 Score = 48.1 bits (24), Expect = 0.089 Identities = 102/128 (79%) Strand = Plus / Plus Query: 450 tcactgatagaaaaggaacgcgggaacatgctgaaagcatttggtactcaggtggcagag 509 |||||||| || ||||| | |||||| ||||| ||||| | ||||||||||||||||| Sbjct: 603 tcactgatggagaaggagagagggaacctgctggaagcactgggtactcaggtggcagaa 662 Query: 510 cctctacgggcaatggtaatgggtgcccctctagaggatgctagacatctagcccagaga 569 || | |||| ||||| ||||| || ||| | || |||||| | ||||| ||||| ||| Sbjct: 663 ccgttgagggctatggtgatgggagctcctttggaagatgctcgccatcttgcccaaaga 722 Query: 570 tatgacag 577 || ||||| Sbjct: 723 tacgacag 730 Score = 42.1 bits (21), Expect = 5.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 121 ggaagcaggcctccaggctcaaggagcaggtcgcccg 157 |||||||||| |||| |||| ||||||||||||||| Sbjct: 268 ggaagcaggcgtccaagctccgggagcaggtcgcccg 304
>ref|NM_001056193.1| Oryza sativa (japonica cultivar-group) Os03g0266700 (Os03g0266700) mRNA, complete cds Length = 1843 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 798 gcaatggttgaggccgagagaacttatcatcagaa 832 ||||||||||| || |||||| ||||||||||||| Sbjct: 1042 gcaatggttgatgctgagagagcttatcatcagaa 1076
>dbj|AK072831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138M07, full insert sequence Length = 1844 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 798 gcaatggttgaggccgagagaacttatcatcagaa 832 ||||||||||| || |||||| ||||||||||||| Sbjct: 1043 gcaatggttgatgctgagagagcttatcatcagaa 1077
>gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosome 5, complete sequence Length = 146575 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 895 cacctccaccccctgcagcaga 916 |||||||||||||||||||||| Sbjct: 135097 cacctccaccccctgcagcaga 135076
>gb|AC117228.2| Mus musculus BAC clone RP23-380J24 from chromosome 2, complete sequence Length = 179980 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 724 taggaaaggaagctgtttcagctatg 749 |||||||||||| ||||||||||||| Sbjct: 86978 taggaaaggaagttgtttcagctatg 86953
>gb|AC126176.5| Homo sapiens 12 BAC RP11-553C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 23501 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 566 gagatatgacagaataaggcaa 587 |||||||||||||||||||||| Sbjct: 7445 gagatatgacagaataaggcaa 7424
>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7, complete sequence Length = 214145 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 354 aaattgtctgatgacagccaga 375 |||||||||||||||||||||| Sbjct: 150521 aaattgtctgatgacagccaga 150542
>emb|BX546441.10| Mouse DNA sequence from clone RP23-366I14 on chromosome 2, complete sequence Length = 114325 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 724 taggaaaggaagctgtttcagctatg 749 |||||||||||| ||||||||||||| Sbjct: 106514 taggaaaggaagttgtttcagctatg 106539
>gb|DQ245179.1| Zea mays clone 13559 mRNA sequence Length = 1002 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gcctccaggctcaaggagcag 149 ||||||||||||||||||||| Sbjct: 732 gcctccaggctcaaggagcag 752
>gb|AC183623.3| Pan troglodytes BAC clone CH251-49H23 from chromosome 5, complete sequence Length = 184771 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 962 catgtttgcctccacttctgc 982 ||||||||||||||||||||| Sbjct: 7091 catgtttgcctccacttctgc 7111
>gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluster, complete sequence Length = 183192 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 gcgtcaaagcagagtaagaga 640 ||||||||||||||||||||| Sbjct: 23703 gcgtcaaagcagagtaagaga 23723
>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence Length = 240812 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 tgtgtttaagcagtttggggc 184 ||||||||||||||||||||| Sbjct: 177676 tgtgtttaagcagtttggggc 177656
>gb|BT018209.1| Zea mays clone EL01N0560D01.c mRNA sequence Length = 778 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1106 caacggctgggcggaaggtgaatgc 1130 |||||||||||||||||| |||||| Sbjct: 439 caacggctgggcggaaggagaatgc 415
>gb|DQ207695.1| Zea mays cultivar inbred line Mo17 IDP364 marker Length = 782 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1106 caacggctgggcggaaggtgaatgc 1130 |||||||||||||||||| |||||| Sbjct: 279 caacggctgggcggaaggagaatgc 255
>gb|DQ207694.1| Zea mays cultivar B73 IDP364 marker Length = 893 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1106 caacggctgggcggaaggtgaatgc 1130 |||||||||||||||||| |||||| Sbjct: 619 caacggctgggcggaaggagaatgc 643
>gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosome 13, complete sequence Length = 197018 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgtgctgccaaacattttcaa 287 ||||||||||||||||||||| Sbjct: 86317 cgtgctgccaaacattttcaa 86297
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 42.1 bits (21), Expect = 5.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 121 ggaagcaggcctccaggctcaaggagcaggtcgcccg 157 |||||||||| |||| |||| ||||||||||||||| Sbjct: 140661 ggaagcaggcgtccaagctccgggagcaggtcgcccg 140697 Score = 42.1 bits (21), Expect = 5.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 450 tcactgatagaaaaggaacgcgggaacatgctgaaagcatttggtactcaggt 502 |||||||| || ||||| | |||||| ||||||||||| | ||||||||||| Sbjct: 141371 tcactgatggagaaggagagagggaacctgctgaaagcactgggtactcaggt 141423
>emb|CR710278.2|CNS0GB02 Tetraodon nigroviridis full-length cDNA Length = 656 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 921 tatacgtcaccgccaccaccatcat 945 ||||| ||||||||||||||||||| Sbjct: 192 tatacatcaccgccaccaccatcat 168
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 450 tcactgatagaaaaggaacgcgggaacatgctgaaagcatttggtactcaggt 502 |||||||| || ||||| | |||||| ||||||||||| | ||||||||||| Sbjct: 19235010 tcactgatggagaaggagagagggaacctgctgaaagcactgggtactcaggt 19234958 Score = 42.1 bits (21), Expect = 5.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 121 ggaagcaggcctccaggctcaaggagcaggtcgcccg 157 |||||||||| |||| |||| ||||||||||||||| Sbjct: 19235720 ggaagcaggcgtccaagctccgggagcaggtcgcccg 19235684
>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence Length = 223119 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1341 tgatgtacatctgacatttcagaac 1365 |||||||||| |||||||||||||| Sbjct: 89981 tgatgtacatgtgacatttcagaac 90005
>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains two novel genes (including FLJ22314), complete sequence Length = 161355 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 aaacacatgtacaagtggtaa 409 ||||||||||||||||||||| Sbjct: 145830 aaacacatgtacaagtggtaa 145850
>emb|X00769.1|MYT4TR Bacteriophage T4 genes 45, 44, 62, regA, 43 (5' end) Length = 3221 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 tggaaattctgataatgcatt 208 ||||||||||||||||||||| Sbjct: 1980 tggaaattctgataatgcatt 1960
>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546, complete sequence Length = 107979 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 aacacatgtacaagtggtaat 410 ||||||||||||||||||||| Sbjct: 89206 aacacatgtacaagtggtaat 89226
>ref|XM_953652.1| Neurospora crassa OR74A hypothetical protein (NCU09402.1) partial mRNA Length = 1425 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 ggggttttgaggaggaacata 1234 ||||||||||||||||||||| Sbjct: 335 ggggttttgaggaggaacata 355
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 tgaaagcatttggtactcagg 501 ||||||||||||||||||||| Sbjct: 110715 tgaaagcatttggtactcagg 110735
>emb|BX004816.11| Zebrafish DNA sequence from clone DKEY-30G5 in linkage group 3, complete sequence Length = 231341 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1341 tgatgtacatctgacatttcagaac 1365 |||||||||| |||||||||||||| Sbjct: 183466 tgatgtacatgtgacatttcagaac 183490
>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence Length = 198847 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 cgtgctgccaaacattttcaa 287 ||||||||||||||||||||| Sbjct: 16700 cgtgctgccaaacattttcaa 16720
>gb|AY104610.1| Zea mays PCO082433 mRNA sequence Length = 1163 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1106 caacggctgggcggaaggtgaatgc 1130 |||||||||||||||||| |||||| Sbjct: 612 caacggctgggcggaaggagaatgc 636
>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence Length = 215042 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 tgtgtttaagcagtttggggc 184 ||||||||||||||||||||| Sbjct: 33510 tgtgtttaagcagtttggggc 33490
>emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chromosome 11, complete sequence Length = 118812 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 gcgtcaaagcagagtaagaga 640 ||||||||||||||||||||| Sbjct: 44320 gcgtcaaagcagagtaagaga 44340
>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164480 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1094 aaagatatcaagcaacggctgggcg 1118 |||||||| |||||||||||||||| Sbjct: 75463 aaagatatgaagcaacggctgggcg 75439 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 253,686,524 Number of extensions: 13321555 Number of successful extensions: 262441 Number of sequences better than 10.0: 52 Number of HSP's gapped: 262433 Number of HSP's successfully gapped: 112 Length of query: 1436 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1413 Effective length of database: 18,503,978,556 Effective search space: 26146121699628 Effective search space used: 26146121699628 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)